Clone Information

BLAST Search Result

Clone Name	rbags5h21
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AB042240.3\| Triticum aestivum chloroplast DNA, complete genome	914	0.0
2	ref\|XM_481018.1\| Oryza sativa (japonica cultivar-group), mRNA	785	0.0
3	ref\|XM_481019.1\| Oryza sativa (japonica cultivar-group), mRNA	785	0.0
4	ref\|XM_507181.1\| PREDICTED Oryza sativa (japonica cultivar-group...	785	0.0
5	gb\|AY522330.1\| Oryza sativa (japonica cultivar-group) cultivar N...	785	0.0
6	gb\|AY522331.1\| Oryza sativa (japonica cultivar-group) isolate PA...	785	0.0
7	gb\|AY522329.1\| Oryza sativa (indica cultivar-group) isolate 93-1...	785	0.0
8	gb\|AC136521.2\| Oryza sativa (japonica cultivar-group) chromosome...	785	0.0
9	gb\|AC134345.2\| Oryza sativa (jpaonica cultivar-group) chromosome...	785	0.0
10	emb\|X15901.1\|CHOSXX Oryza sativa (japonica cultivar-group) chlor...	785	0.0
11	emb\|BX569685.1\|OSJN00291 Oryza sativa genomic DNA, chromosome 4,...	785	0.0
12	gb\|AC122148.1\| Oryza sativa (japonica cultivar-group) chromosome...	785	0.0
13	gb\|AC099402.2\| Oryza sativa chromosome 10 clone OSJNBa0022D10, c...	785	0.0
14	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	785	0.0
15	dbj\|AP008216.1\| Oryza sativa (japonica cultivar-group) genomic D...	785	0.0
16	dbj\|AP008214.1\| Oryza sativa (japonica cultivar-group) genomic D...	785	0.0
17	dbj\|AP008211.1\| Oryza sativa (japonica cultivar-group) genomic D...	785	0.0
18	dbj\|AP005161.3\| Oryza sativa (japonica cultivar-group) genomic D...	785	0.0
19	dbj\|AK105308.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	785	0.0
20	dbj\|AK071967.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	785	0.0
21	gb\|AE016959.3\| Oryza sativa (japonica cultivar-group) chromosome...	785	0.0
22	dbj\|AP008218.1\| Oryza sativa (japonica cultivar-group) genomic D...	777	0.0
23	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	777	0.0
24	dbj\|AP003280.2\| Oryza sativa (japonica cultivar-group) genomic D...	777	0.0
25	dbj\|AK063122.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	777	0.0
26	gb\|DP000011.1\| Oryza sativa (japonica cultivar-group) chromosome...	777	0.0
27	emb\|AL954853.5\|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb...	777	0.0
28	dbj\|AP006728.1\| Oryza nivara chloroplast DNA, complete genome	777	0.0
29	ref\|XM_479424.1\| Oryza sativa (japonica cultivar-group), mRNA	769	0.0
30	ref\|XM_479423.1\| Oryza sativa (japonica cultivar-group), mRNA	769	0.0
31	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	769	0.0
32	dbj\|AP008212.1\| Oryza sativa (japonica cultivar-group) genomic D...	769	0.0
33	dbj\|AP005452.5\| Oryza sativa (japonica cultivar-group) genomic D...	769	0.0
34	dbj\|AP003825.3\| Oryza sativa (japonica cultivar-group) genomic D...	769	0.0
35	dbj\|AP004236.3\| Oryza sativa (japonica cultivar-group) genomic D...	769	0.0
36	dbj\|AP003623.3\| Oryza sativa (japonica cultivar-group) genomic D...	769	0.0
37	gb\|AE009947.2\| Saccharum hybrid cultivar SP-80-3280 chloroplast,...	759	0.0
38	dbj\|AP006714.1\| Saccharum officinarum chloroplast DNA, complete ...	759	0.0
39	emb\|X86563.2\|ZMA86563 Zea mays complete chloroplast genome	751	0.0
40	emb\|X06734.1\|CHZMRP14 Maize chloroplast genes for ribosomal prot...	751	0.0
41	gb\|AY928077.1\| Zea mays cultivar B73 chloroplast, complete genome	751	0.0
42	ref\|XM_450630.1\| Oryza sativa (japonica cultivar-group), mRNA	745	0.0
43	ref\|XM_450631.1\| Oryza sativa (japonica cultivar-group), mRNA	745	0.0
44	ref\|XM_506652.1\| PREDICTED Oryza sativa (japonica cultivar-group...	745	0.0
45	dbj\|AP008215.1\| Oryza sativa (japonica cultivar-group) genomic D...	745	0.0
46	dbj\|AP005675.3\| Oryza sativa (japonica cultivar-group) genomic D...	745	0.0
47	dbj\|AP005422.3\| Oryza sativa (japonica cultivar-group) genomic D...	745	0.0
48	gb\|AC120991.3\| Oryza sativa (japonica cultivar-group) chromosome...	737	0.0
49	gb\|AC104708.2\| Oryza sativa (japonica cultivar-group) chromosome...	737	0.0
50	ref\|NM_190859.1\| Oryza sativa (japonica cultivar-group), predic...	618	e-174
51	gb\|AC145383.3\| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genom...	539	e-150
52	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	539	e-150
53	emb\|AL732379.5\|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0...	539	e-150
54	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	539	e-150
55	gb\|AC084748.11\| Oryza sativa chromosome 3 BAC OSJNBa0010I09 geno...	462	e-127
56	gb\|AC084320.10\| Oryza sativa chromosome 3 BAC OSJNBa0091J19 geno...	462	e-127
57	gb\|DQ069425.1\| Typha latifolia ribosomal protein L14 (rpl14) gen...	402	e-109
58	gb\|DQ069426.1\| Yucca schidigera ribosomal protein L14 (rpl14) ge...	387	e-104
59	emb\|AL731738.6\|CNS08C7N Oryza sativa chromosome 12, . BAC OSJNBa...	365	1e-97
60	gb\|AC093492.3\| Oryza sativa (japonica cultivar-group) chromosome...	351	2e-93
61	gb\|AC093493.2\| Oryza sativa (japonica cultivar-group) chromosome...	351	2e-93
62	emb\|AJ428413.1\|CFE428413 Calycanthus fertilis var. ferax complet...	349	6e-93
63	gb\|AY916449.1\| Phalaenopsis aphrodite subsp. formosana plastid, ...	323	4e-85
64	emb\|AJ879453.1\| Acorus calamus chloroplast, complete genome	319	6e-84
65	gb\|DQ347958.1\| Solanum bulbocastanum cultivar PT29 chloroplast, ...	307	2e-80
66	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	305	8e-80
67	dbj\|AP006523.2\| Oryza sativa (japonica cultivar-group) genomic D...	305	8e-80
68	gb\|DQ069421.1\| Acorus americanus ribosomal protein L14 (rpl14) g...	299	5e-78
69	gb\|DQ383815.1\| Helianthus annuus cultivar line HA383 chloroplast...	299	5e-78
70	gb\|DQ386163.1\| Solanum tuberosum cultivar Desiree chloroplast, c...	299	5e-78
71	gb\|DQ231562.1\| Solanum tuberosum chloroplast, complete genome	299	5e-78
72	gb\|DQ069423.1\| Nuphar advena ribosomal protein L14 (rpl14) gene,...	291	1e-75
73	gb\|AY582139.1\| Panax ginseng chloroplast, complete genome	291	1e-75
74	emb\|AM087200.2\| Lycopersicon esculentum complete chloroplast genome	291	1e-75
75	gb\|DQ347959.1\| Lycopersicon esculentum cultivar LA3023 chloropla...	291	1e-75
76	gb\|DQ424856.1\| Vitis vinifera cultivar Maxxa chloroplast, comple...	289	5e-75
77	gb\|DQ383816.1\| Lactuca sativa cultivar Salinas chloroplast, comp...	287	2e-74
78	emb\|AJ627251.1\| Nymphaea alba chloroplast, complete genome	287	2e-74
79	dbj\|AP007232.1\| Lactuca sativa chloroplast DNA, complete genome	287	2e-74
80	emb\|AJ970307.1\| Cucumis sativus chloroplast complete genome	285	8e-74
81	gb\|AF441853.1\|AF441853 Cucumis sativus RBL1 mRNA, complete cds; ...	285	8e-74
82	gb\|DQ119058.1\| Cucumis sativus cultivar Baekmibaekdadagi plastid...	285	8e-74
83	dbj\|AB240139.1\| Nicotiana tomentosiformis chloroplast DNA, compl...	283	3e-73
84	emb\|Z00044.2\|CHNTXX Nicotiana tabacum chloroplast genome DNA	276	8e-71
85	emb\|AJ400848.1\|SOL400848 Spinacia oleracea complete chloroplast ...	276	8e-71
86	emb\|AJ316582.1\|ABE316582 Atropa belladonna complete chloroplast ...	276	8e-71
87	dbj\|AB237912.1\| Nicotiana sylvestris chloroplast DNA, complete s...	276	8e-71
88	gb\|DQ345959.1\| Gossypium hirsutum cultivar coker 310 FR chloropl...	274	3e-70
89	emb\|X13336.1\|CHSORP Spinacia oleracea plastid genes rps3, rps19,...	254	3e-64
90	dbj\|AP000423.1\| Arabidopsis thaliana chloroplast genomic DNA, co...	250	4e-63
91	dbj\|AP004556.3\| Oryza sativa (japonica cultivar-group) genomic D...	242	1e-60
92	dbj\|AP005415.2\| Oryza sativa (japonica cultivar-group) genomic D...	242	1e-60
93	gb\|DQ069424.1\| Ranunculus macranthus ribosomal protein L14 (rpl1...	238	2e-59
94	emb\|AJ506156.2\|ATR506156 Amborella trichopoda chloroplast genomi...	234	3e-58
95	emb\|AJ271079.2\|OEL271079 Oenothera elata subsp. hookeri chloropl...	234	3e-58
96	gb\|AY780259.1\| Eucalyptus globulus subsp. globulus chloroplast, ...	218	2e-53
97	gb\|DQ231548.1\| Brassica rapa subsp. pekinensis chloroplast sequence	216	6e-53
98	dbj\|AP002983.1\| Lotus japonicus chloroplast DNA, complete genome	212	9e-52
99	dbj\|AP008982.1\| Triticum aestivum mitochondrial DNA, complete ge...	210	4e-51
100	gb\|M15176.1\|MZECPPG Zea mays chloroplast Eco x DNA	194	2e-46
101	dbj\|AP006174.3\| Oryza sativa (japonica cultivar-group) genomic D...	186	5e-44
102	dbj\|AP006067.3\| Oryza sativa (japonica cultivar-group) genomic D...	186	5e-44
103	dbj\|AP005389.3\| Oryza sativa (japonica cultivar-group) genomic D...	186	5e-44
104	dbj\|AP005298.3\| Oryza sativa (japonica cultivar-group) genomic D...	186	5e-44
105	gb\|DQ167399.1\| Oryza sativa (indica cultivar-group) isolate 93-1...	170	3e-39
106	gb\|DQ167807.1\| Oryza sativa (japonica cultivar-group) isolate PA...	170	3e-39
107	gb\|DQ167400.1\| Oryza sativa (japonica cultivar-group) cultivar N...	170	3e-39
108	dbj\|BA000029.3\| Oryza sativa (japonica cultivar-group) mitochond...	170	3e-39
109	gb\|AC137998.2\| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genom...	163	8e-37
110	gb\|AF229187.1\|AF229187 Oryza sativa subsp. japonica BAC clone nb...	155	2e-34
111	dbj\|D13105.1\|RICMT09 Oryza sativa (japonica cultivar-group) mito...	155	2e-34
112	dbj\|AP005707.3\| Oryza sativa (japonica cultivar-group) genomic D...	153	8e-34
113	dbj\|AP005683.2\| Oryza sativa (japonica cultivar-group) genomic D...	153	8e-34
114	dbj\|AP003768.3\| Oryza sativa (japonica cultivar-group) genomic D...	145	2e-31
115	gb\|AF536225.1\| Vigna angularis chloroplast S10B operon, partial ...	141	3e-30
116	dbj\|AP003861.2\| Oryza sativa (japonica cultivar-group) genomic D...	141	3e-30
117	gb\|AC093544.8\| Medicago truncatula chloroplast, complete genome,...	139	1e-29
118	gb\|DQ317523.1\| Glycine max cultivar PI 437654 chloroplast, compl...	125	2e-25
119	dbj\|D17510.1\|PINCPTRPG Pinus thunbergii chloroplast DNA, complet...	123	7e-25
120	emb\|X68048.1\|CHPVHISG Phaseolus vulgaris chloroplast DNA for tRN...	117	4e-23
121	gb\|AC133862.6\| Medicago truncatula clone mth2-30d7, complete seq...	115	2e-22
122	gb\|AC124957.18\| Medicago truncatula clone mth2-15k14, complete s...	115	2e-22
123	gb\|AY228468.1\| Pinus Koraiensis chloroplast, complete genome	115	2e-22
124	gb\|M60180.1\|OBECPRPB O.ammophila ribosomal protein L14 and S8 (r...	98	4e-17
125	dbj\|AB077366.1\| Iris bungei plastid DNA, intron region	94	6e-16
126	gb\|AY958086.1\| Zygnema circumcarinatum chloroplast, complete genome	92	2e-15
127	emb\|X04465.1\|CHMPXX Marchantia polymorpha chloroplast genome DNA	88	4e-14
128	emb\|AL663020.4\|OSJN00220 Oryza sativa genomic DNA, chromosome 4,...	86	1e-13
129	dbj\|AP005672.1\| Physcomitrella patens subsp. patens chloroplast ...	86	1e-13
130	dbj\|AB087469.1\| Anthoceros formosae chloroplast rpl14 mRNA for r...	82	2e-12
131	dbj\|AB086179.1\| Anthoceros formosae chloroplast DNA, complete ge...	82	2e-12
132	gb\|M60179.1\|OBECPRPA O.ammophila ribosomal protein L14 and L16 (...	82	2e-12
133	gb\|AY660566.1\| Huperzia lucidula chloroplast, complete genome	80	9e-12
134	emb\|AL662985.3\|OSJN00189 Oryza sativa genomic DNA, chromosome 4,...	78	4e-11
135	dbj\|AP004038.2\| Oryza sativa (japonica cultivar-group) genomic D...	76	1e-10
136	dbj\|AP004638.1\| Psilotum nudum chloroplast DNA, complete genome	74	6e-10
137	dbj\|AB077439.1\| Sophora alopecuroides plastid DNA, intron region	72	2e-09
138	dbj\|AP003418.2\| Oryza sativa (japonica cultivar-group) genomic D...	70	9e-09
139	gb\|DQ069422.1\| Ginkgo biloba ribosomal protein L14 (rpl14) gene,...	68	3e-08
140	gb\|M80799.1\|VIRCPRPL Vigna unguiculata chloroplast ribosomal pro...	66	1e-07
141	dbj\|AB077337.1\| Saussurea involucrata plastid DNA, intron region	64	5e-07
142	emb\|X03834.1\|CHSOL16 Spirodela oligorhiza chloroplast gene for r...	64	5e-07
143	gb\|DQ396875.1\| Scenedesmus obliquus strain UTEX 393 chloroplast,...	62	2e-06
144	dbj\|AP004159.3\| Oryza sativa (japonica cultivar-group) genomic D...	62	2e-06
145	gb\|DQ291132.1\| Oltmannsiellopsis viridis chloroplast, complete g...	58	3e-05
146	dbj\|AB077335.1\| Allium altaicum plastid DNA, intron region	58	3e-05
147	gb\|AY178864.1\| Adiantum capillus-veneris chloroplast, complete g...	56	1e-04
148	tpg\|BK000554.2\| TPA: TPA_inf: Chlamydomonas reinhardtii chloropl...	56	1e-04
149	dbj\|AB077365.1\| Iris dichotoma plastid DNA, intron region	56	1e-04
150	emb\|X14062.1\|CHCRL14 Chlamydomonas reinhardtii plasti gene for r...	56	1e-04
151	gb\|M30487.1\|CPACYRP Cyanophora paradoxa ribosomal protein l22 (r...	54	5e-04
152	emb\|AL928780.5\|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa...	54	5e-04
153	gb\|U30821.1\|CPU30821 Cyanophora paradoxa cyanelle, complete genome	54	5e-04
154	gb\|AF050665.1\|AF050665 Spirogyra maxima tRNA-Ile gene, complete ...	52	0.002
155	gb\|CP000117.1\| Anabaena variabilis ATCC 29413 chromosome, comple...	50	0.008
156	dbj\|BA000019.2\| Nostoc sp. PCC 7120 DNA, complete genome	50	0.008
157	gb\|AY958085.1\| Staurastrum punctulatum chloroplast, complete genome	48	0.032
158	gb\|AC135558.6\| Oryza sativa (japonica cultivar-group) chromosome...	48	0.032
159	dbj\|AP008217.1\| Oryza sativa (japonica cultivar-group) genomic D...	48	0.032
160	dbj\|AB077333.1\| Ferula feruloides plastid DNA, intron region	48	0.032
161	gb\|DP000010.1\| Oryza sativa (japonica cultivar-group) chromosome...	48	0.032
162	ref\|NM_128441.3\| Arabidopsis thaliana structural constituent of ...	46	0.13
163	emb\|AL359081.10\| Human DNA sequence from clone RP11-541F9 on chr...	46	0.13
164	gb\|AC005727.3\| Arabidopsis thaliana chromosome 2 clone F8N16 map...	46	0.13
165	gb\|AY219111.2\| Arabidopsis thaliana hypothetical protein (At2g28...	46	0.13
166	dbj\|AP000606.1\| Arabidopsis thaliana genomic DNA, chromosome 3, ...	46	0.13
167	dbj\|AB028608.1\| Arabidopsis thaliana genomic DNA, chromosome 3, ...	46	0.13
168	gb\|AC157473.1\| Medicago truncatula chromosome 7 BAC clone mte1-1...	46	0.13
169	gb\|AC132335.3\| Mus musculus BAC clone RP24-230C24 from chromosom...	44	0.50
170	dbj\|AB025638.1\| Arabidopsis thaliana genomic DNA, chromosome 5, ...	44	0.50
171	dbj\|AB077440.1\| Incarvillea potaninii plastid DNA, intron region	44	0.50
172	dbj\|AB077334.1\| Zygophyllum pterocarpum plastid DNA, intron region	44	0.50
173	gb\|AC166165.3\| Mus musculus BAC clone RP23-381I17 from chromosom...	44	0.50
174	gb\|CP000109.1\| Thiomicrospira crunogena XCL-2, complete genome	42	2.0
175	emb\|CT009479.4\| M.truncatula DNA sequence from clone MTH2-164E3 ...	42	2.0
176	emb\|CR753838.10\| Zebrafish DNA sequence from clone DKEY-189H5 in...	42	2.0
177	emb\|AL606489.26\| Human DNA sequence from clone RP11-739N20 on ch...	42	2.0
178	ref\|XM_503361.1\| Yarrowia lipolytica CLIB122, YALI0E00154g predi...	42	2.0
179	emb\|AL359821.11\| Human DNA sequence from clone RP11-175G14 on ch...	42	2.0
180	emb\|AL355355.25\| Human DNA sequence from clone RP11-730A19 on ch...	42	2.0
181	emb\|AL122003.17\|HSJ659I19 Human DNA sequence from clone RP4-659I...	42	2.0
182	emb\|AL162752.2\|NMA1Z2491 Neisseria meningitidis serogroup A stra...	42	2.0
183	gb\|AC084817.5\| Oryza sativa (japonica cultivar-group) chromosome...	42	2.0
184	gb\|AY835431.1\| Pseudendoclonium akinetum chloroplast, complete g...	42	2.0
185	gb\|AC025821.7\| Homo sapiens BAC clone RP11-472F4 from 4, complet...	42	2.0
186	dbj\|AK034773.1\| Mus musculus 12 days embryo embryonic body betwe...	42	2.0
187	gb\|AE002098.2\| Neisseria meningitidis MC58, complete genome	42	2.0
188	gb\|AC109358.3\| Homo sapiens BAC clone RP11-648D16 from 2, comple...	42	2.0
189	gb\|AC073885.5\| Homo sapiens BAC clone RP11-70L16 from 2, complet...	42	2.0
190	gb\|AF283525.1\|AF283519S7 Homo sapiens FIP2 gene, exons 11, 12 an...	42	2.0
191	dbj\|AK120872.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	42	2.0
192	gb\|AE004969.1\| Neisseria gonorrhoeae FA 1090, complete genome	42	2.0
193	emb\|BX322606.6\| Zebrafish DNA sequence from clone DKEY-40F12, co...	42	2.0
194	gb\|U38804.1\|PPU38804 Porphyra purpurea chloroplast, complete genome	42	2.0
195	emb\|CR382131.1\| Yarrowia lipolytica chromosome E of strain CLIB ...	42	2.0
196	gb\|AC165159.2\| Mus musculus BAC clone RP23-234N1 from chromosome...	42	2.0
197	ref\|XM_639569.1\| Dictyostelium discoideum histidine kinase (DDB0...	40	7.8
198	ref\|XM_639498.1\| Dictyostelium discoideum histidine kinase DhkI ...	40	7.8
199	ref\|XM_634860.1\| Dictyostelium discoideum hypothetical protein (...	40	7.8
200	gb\|AC167973.4\| Mus musculus BAC clone RP23-453B4 from chromosome...	40	7.8
201	gb\|AC153856.23\| Mus musculus 10 BAC RP23-468J15 (Roswell Park Ca...	40	7.8
202	gb\|AY681321.1\| Agelena orientalis toxin-like structure Agel_24 p...	40	7.8
203	gb\|CP000262.1\| Streptococcus pyogenes MGAS10750, complete genome	40	7.8
204	gb\|DQ415920.1\| Cleome spinosa clone BAC Cs3, complete sequence	40	7.8
205	emb\|CT025560.9\| Mouse DNA sequence from clone RP23-432N22 on chr...	40	7.8
206	emb\|CR450788.7\| Zebrafish DNA sequence from clone DKEY-15P23 in ...	40	7.8
207	emb\|BX005436.12\| Zebrafish DNA sequence from clone DKEY-9A8 in l...	40	7.8
208	emb\|Z76735.1\|HS246O8 Human DNA sequence from clone RP1-246O8 on ...	40	7.8
209	emb\|AL603882.13\| Human DNA sequence from clone RP11-630I5 on chr...	40	7.8
210	gb\|AC163342.2\| Mus musculus BAC clone RP24-115M13 from chromosom...	40	7.8
211	emb\|BX572101.1\| Prochlorococcus marinus MIT9313 complete genome;...	40	7.8
212	gb\|AC159379.14\| Mus musculus 10 BAC RP23-210F14 (Roswell Park Ca...	40	7.8
213	emb\|AL627283.1\| Salmonella enterica serovar Typhi (Salmonella ty...	40	7.8
214	gb\|AC156991.9\| Mus musculus chromosome 8, clone RP23-297F23, com...	40	7.8
215	emb\|BX510930.15\| Zebrafish DNA sequence from clone DKEY-91L18 in...	40	7.8
216	gb\|CP000268.1\| Rhodoferax ferrireducens DSM 15236 plasmid1, comp...	40	7.8
217	gb\|AC108100.2\| Homo sapiens chromosome 5 clone RP11-125A21, comp...	40	7.8
218	gb\|AC010406.7\| Homo sapiens chromosome 5 clone CTD-2154H6, compl...	40	7.8
219	emb\|BX664600.7\| Zebrafish DNA sequence from clone CH211-112M13, ...	40	7.8
220	gb\|AC159542.8\| Mus musculus 10 BAC RP23-137B10 (Roswell Park Can...	40	7.8
221	gb\|AC136037.2\| Rattus norvegicus X BAC CH230-378N18 (Children's ...	40	7.8
222	gb\|AC087254.2\| Danio rerio clone 91J1, complete sequence	40	7.8
223	gb\|AF362371.1\|AF362371 Dictyostelium discoideum histidine kinase...	40	7.8
224	gb\|AC103567.2\| Caenorhabditis elegans cosmid Y51F10, complete se...	40	7.8
225	gb\|AF166114.1\|AF166114 Mesostigma viride chloroplast DNA, comple...	40	7.8
226	gb\|AC116330.2\| Dictyostelium discoideum chromosome 2 map 3191214...	40	7.8
227	gb\|AC010423.8\| Homo sapiens chromosome 5 clone CTD-2193G5, compl...	40	7.8
228	gb\|AE016754.1\| Mus musculus chromosome 10 high-growth region, se...	40	7.8
229	emb\|BX511028.13\| Zebrafish DNA sequence from clone DKEY-161N17 i...	40	7.8
230	emb\|CT010464.7\| M.truncatula DNA sequence from clone MTH2-95O22 ...	40	7.8
231	gb\|AE014613.1\| Salmonella enterica subsp. enterica serovar Typhi...	40	7.8
232	gb\|AF041468.1\| Guillardia theta complete plastid genome	40	7.8
233	gb\|AE017220.1\| Salmonella enterica subsp. enterica serovar Chole...	40	7.8
234	gb\|AE016830.1\| Enterococcus faecalis V583, complete genome	40	7.8
235	gb\|AC154414.2\| Mus musculus BAC clone RP24-231D24 from 16, compl...	40	7.8
236	gb\|AC158600.17\| Mus musculus 10 BAC RP24-211K19 (Roswell Park Ca...	40	7.8
237	emb\|CR385050.10\| Zebrafish DNA sequence from clone DKEY-22I16 in...	40	7.8
238	gb\|AF494278.1\| Chaetosphaeridium globosum chloroplast, complete ...	40	7.8

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score =  914 bits (461), Expect = 0.0
 Identities = 479/485 (98%)
 Strand = Plus / Plus

                                                                         
Query: 9     attaattctttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaa 68
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76999 attaattctttgatctcaatttcgcctactagtatttataatacttcaggagctaatgaa 77058

                                                                         
Query: 69    actattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagtt 128
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 77059 actattttggtaaaattcaatcctctcaattcctcggcaatcgcgccaaaaactcgagtt 77118

                                                                         
Query: 129   ccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggattatt 188
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77119 ccttttggattgcctttttgatcaattataaccgcagcattgtcatcatagcggattatt 77178

                                                                         
Query: 189   ataccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcg 248
             |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 77179 ataccgtcttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcg 77238

                                                                         
Query: 249   gatctttctagaggcatttggggcaatgcgtctttgattacagcaacaataacatcacca 308
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77239 gatctttctagaggcatttggggcaatgcgtctttgattacagcaacaataacatcacca 77298

                                                                         
Query: 309   atacgagcatatcgctgattaccagcagctcctatgactcgaatacacatcaattttcga 368
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77299 atacgagcatatcgctgattaccagcagctcctatgactcgaatacacatcaattttcga 77358

                                                                         
Query: 369   gctccactattgtctgctacatttaaaagggtctgaggttgaatcatattattttgattt 428
             ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77359 gctccactattatcggctacatttaaaagggtctgaggttgaatcatattattttgattt 77418

                                                                         
Query: 429   caatttgttatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77419 caatttgttatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 77478

                  
Query: 489   gggca 493
             |||||
Sbjct: 77479 gggca 77483



 Score =  135 bits (68), Expect = 2e-28
 Identities = 71/72 (98%)
 Strand = Plus / Plus

                                                                         
Query: 505   ccataccccttttagggttctatatctctaatcgaataaattgacttcgtatgggcattt 564
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77499 ccataccccttttagggttctatatctctaatcgaataaattgacttcgtatgggcattt 77558

                         
Query: 565   tactggccgcta 576
             ||||||| ||||
Sbjct: 77559 tactggcagcta 77570

to top

>ref|XM_481018.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 793

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                       
Query: 17  tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
           ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 690

                                                                       
Query: 77  ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
            ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 689 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 630

                                                                       
Query: 137 gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
            || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 629 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 570

                                                                       
Query: 197 ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 510

                                                                       
Query: 257 tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 450

                                                                       
Query: 317 atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 390

                                                                       
Query: 377 attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
            || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 330

                                                               
Query: 437 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 329 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 278



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 525 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 239 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 188

to top

>ref|XM_481019.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2157

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                        
Query: 17   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1491 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 1432

                                                                        
Query: 77   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1431 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 1372

                                                                        
Query: 137  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1371 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 1312

                                                                        
Query: 197  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1311 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 1252

                                                                        
Query: 257  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 1192

                                                                        
Query: 317  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 1132

                                                                        
Query: 377  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 1072

                                                                
Query: 437  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1071 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 1020



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 525 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 981 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 930

to top

>ref|XM_507181.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0036E18.24
            mRNA
          Length = 2157

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                        
Query: 17   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1491 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 1432

                                                                        
Query: 77   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1431 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 1372

                                                                        
Query: 137  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1371 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 1312

                                                                        
Query: 197  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1311 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 1252

                                                                        
Query: 257  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 1192

                                                                        
Query: 317  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 1132

                                                                        
Query: 377  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 1072

                                                                
Query: 437  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1071 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 1020



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 525 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 981 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 930

to top

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
             complete genome
          Length = 134551

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 17    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77234 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 77293

                                                                         
Query: 77    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 77294 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 77353

                                                                         
Query: 137   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 77354 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 77413

                                                                         
Query: 197   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77414 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 77473

                                                                         
Query: 257   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77474 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 77533

                                                                         
Query: 317   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77534 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 77593

                                                                         
Query: 377   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77594 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 77653

                                                                 
Query: 437   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 77654 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 77705



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 77743 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 77794

to top

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
             complete genome
          Length = 134551

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 17    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77234 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 77293

                                                                         
Query: 77    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 77294 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 77353

                                                                         
Query: 137   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 77354 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 77413

                                                                         
Query: 197   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77414 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 77473

                                                                         
Query: 257   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77474 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 77533

                                                                         
Query: 317   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77534 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 77593

                                                                         
Query: 377   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77594 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 77653

                                                                 
Query: 437   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 77654 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 77705



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 77743 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 77794

to top

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast,
             complete genome
          Length = 134496

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 17    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77175 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 77234

                                                                         
Query: 77    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 77235 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 77294

                                                                         
Query: 137   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 77295 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 77354

                                                                         
Query: 197   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77355 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 77414

                                                                         
Query: 257   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77415 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 77474

                                                                         
Query: 317   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77475 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 77534

                                                                         
Query: 377   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77535 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 77594

                                                                 
Query: 437   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 77595 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 77646



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 77687 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 77738

to top

>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OSJNBa0034M22, complete sequence
          Length = 149435

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 17    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53245 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 53304

                                                                         
Query: 77    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 53305 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 53364

                                                                         
Query: 137   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 53365 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 53424

                                                                         
Query: 197   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53425 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 53484

                                                                         
Query: 257   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53485 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 53544

                                                                         
Query: 317   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53545 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 53604

                                                                         
Query: 377   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53605 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 53664

                                                                 
Query: 437   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 53665 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 53716



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 53754 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 53805

to top

>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07,
              complete sequence
          Length = 136858

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                          
Query: 17     tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
              ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126073 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 126132

                                                                          
Query: 77     ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
               ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 126133 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 126192

                                                                          
Query: 137    gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
               || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 126193 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 126252

                                                                          
Query: 197    ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
              |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126253 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 126312

                                                                          
Query: 257    tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126313 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 126372

                                                                          
Query: 317    atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
              |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126373 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 126432

                                                                          
Query: 377    attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
               || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126433 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 126492

                                                                  
Query: 437    tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
              ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 126493 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 126544



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                  
Query: 525    tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
              ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 126582 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 126633

to top

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 17    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77221 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 77280

                                                                         
Query: 77    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 77281 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 77340

                                                                         
Query: 137   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 77341 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 77400

                                                                         
Query: 197   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77401 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 77460

                                                                         
Query: 257   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77461 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 77520

                                                                         
Query: 317   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77521 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 77580

                                                                         
Query: 377   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77581 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 77640

                                                                 
Query: 437   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 77641 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 77692



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 77730 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 77781

to top

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
             complete sequence
          Length = 145980

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                         
Query: 17    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73559 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 73500

                                                                         
Query: 77    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 73499 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 73440

                                                                         
Query: 137   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 73439 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 73380

                                                                         
Query: 197   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73379 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 73320

                                                                         
Query: 257   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73319 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 73260

                                                                         
Query: 317   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73259 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 73200

                                                                         
Query: 377   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73199 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 73140

                                                                 
Query: 437   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 73139 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 73088



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 73009 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 72958



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 525   tatatctctaatcgaataaattgacttcgtatggg 559
             ||||| ||||| |||| ||||||||||||||||||
Sbjct: 73049 tatatttctaaccgaagaaattgacttcgtatggg 73015

to top

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 17    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75422 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 75481

                                                                         
Query: 77    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 75482 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 75541

                                                                         
Query: 137   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 75542 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 75601

                                                                         
Query: 197   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75602 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 75661

                                                                         
Query: 257   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75662 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 75721

                                                                         
Query: 317   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75722 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 75781

                                                                         
Query: 377   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75782 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 75841

                                                                 
Query: 437   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 75842 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 75893



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 75932 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 75983

to top

>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                        
Query: 17   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9486 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 9545

                                                                        
Query: 77   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 9546 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 9605

                                                                        
Query: 137  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 9606 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 9665

                                                                        
Query: 197  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9666 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 9725

                                                                        
Query: 257  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9726 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 9785

                                                                        
Query: 317  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9786 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 9845

                                                                        
Query: 377  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9846 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 9905

                                                                
Query: 437  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 9906 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 9957



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 9996  tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 10047

to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                           
Query: 17      tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
               ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9192486 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 9192427

                                                                           
Query: 77      ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
                ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 9192426 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 9192367

                                                                           
Query: 137     gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
                || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 9192366 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 9192307

                                                                           
Query: 197     ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
               |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9192306 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 9192247

                                                                           
Query: 257     tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9192246 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 9192187

                                                                           
Query: 317     atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
               |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9192186 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 9192127

                                                                           
Query: 377     attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
                || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9192126 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 9192067

                                                                   
Query: 437     tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
               ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 9192066 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 9192015



 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                           
Query: 17      tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
               ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9115533 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 9115474

                                                                           
Query: 77      ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
                ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 9115473 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 9115414

                                                                           
Query: 137     gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
                || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 9115413 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 9115354

                                                                           
Query: 197     ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
               |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9115353 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 9115294

                                                                           
Query: 257     tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9115293 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 9115234

                                                                           
Query: 317     atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
               |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9115233 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 9115174

                                                                           
Query: 377     attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
                || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9115173 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 9115114

                                                                   
Query: 437     tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
               ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 9115113 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 9115062



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                                   
Query: 220      tacgtacaattacagctcgaattacttcggatctttctagaggcatttggg 270
                |||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 17722552 tacgtacaattacagctcaaattacttcggatctttccagaggcatttggg 17722502



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 73/84 (86%), Gaps = 4/84 (4%)
 Strand = Plus / Plus

                                                                           
Query: 211     ctttacatgtacgtacaattacagctcgaattact----tcggatctttctagaggcatt 266
               ||||||||||||||||||||||||||||  |||||    || ||||||||||||||||||
Sbjct: 2072703 ctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttctagaggcatt 2072762

                                       
Query: 267     tggggcaatgcgtctttgattaca 290
               | ||||| ||| |||||| |||||
Sbjct: 2072763 ttgggcactgcttctttggttaca 2072786



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                   
Query: 525     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 9191936 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 9191885



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                   
Query: 525     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 9114983 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 9114932



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 525     tatatctctaatcgaataaattgacttcgtatggg 559
               ||||| ||||| |||| ||||||||||||||||||
Sbjct: 9191976 tatatttctaaccgaagaaattgacttcgtatggg 9191942



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 525     tatatctctaatcgaataaattgacttcgtatggg 559
               ||||| ||||| |||| ||||||||||||||||||
Sbjct: 9115023 tatatttctaaccgaagaaattgacttcgtatggg 9114989

to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                            
Query: 17       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10369030 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 10369089

                                                                            
Query: 77       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
                 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 10369090 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 10369149

                                                                            
Query: 137      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 10369150 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 10369209

                                                                            
Query: 197      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10369210 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 10369269

                                                                            
Query: 257      tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10369270 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 10369329

                                                                            
Query: 317      atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
                |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10369330 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 10369389

                                                                            
Query: 377      attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
                 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10369390 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 10369449

                                                                    
Query: 437      tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 10369450 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 10369501



 Score =  155 bits (78), Expect = 2e-34
 Identities = 144/165 (87%), Gaps = 7/165 (4%)
 Strand = Plus / Minus

                                                                            
Query: 203      tttgaattctttacatgtacgtacaattacagctcgaattacttcgg----atctttcta 258
                ||||| ||||||||||||||||||||||||||||||  ||||||| |    |||||||||
Sbjct: 14021582 tttgagttctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttcta 14021523

                                                                            
Query: 259      gaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcat 318
                ||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 14021522 gaggcattttgggcactgcttctttgattacagcaacaataacgtcaccaatatgagcat 14021463

                                                             
Query: 319      atcgctgattaccagcagctcctatgactcgaatacacatcaatt 363
                |||  |||||||   ||||||||| || ||||||||| |||||||
Sbjct: 14021462 atcagtgattac---cagctcctaagattcgaatacatatcaatt 14021421



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 525      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 10369540 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 10369591

to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                           
Query: 17      tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
               ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9259828 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 9259769

                                                                           
Query: 77      ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
                ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 9259768 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 9259709

                                                                           
Query: 137     gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
                || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 9259708 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 9259649

                                                                           
Query: 197     ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
               |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9259648 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 9259589

                                                                           
Query: 257     tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9259588 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 9259529

                                                                           
Query: 317     atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
               |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9259528 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 9259469

                                                                           
Query: 377     attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
                || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9259468 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 9259409

                                                                   
Query: 437     tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
               ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 9259408 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 9259357



 Score =  242 bits (122), Expect = 1e-60
 Identities = 158/170 (92%)
 Strand = Plus / Minus

                                                                            
Query: 143      tttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtcttcgca 202
                |||||||||||| |||||| | |||||||  |||||||| ||||||||||| ||||||||
Sbjct: 10791213 tttttgatcaatgataacctctgcattgttgtcatagcgtattattataccatcttcgca 10791154

                                                                            
Query: 203      tttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttctagagg 262
                |||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 10791153 tttgaactctttacatgtatgtacaattacacctcaaattacttcggatctttctagagg 10791094

                                                                  
Query: 263      catttggggcaatgcgtctttgattacagcaacaataacatcaccaatac 312
                ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 10791093 catttggggcactgcgtctttgattacagcaacaataacatcaccaatac 10791044



 Score =  186 bits (94), Expect = 5e-44
 Identities = 146/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                            
Query: 47       taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 106
                |||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 17206218 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattcctcggc 17206277

                                                                            
Query: 107      aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 166
                 || ||||||||||| | |||||| ||||| || ||||||| |||||| |||||||||||
Sbjct: 17206278 cattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcagc 17206336

                                                          
Query: 167      attgtcatcatagcggattattataccgtcttcgcatttgaa 208
                | |||  |||||||| ||||||||||||||||||||||||||
Sbjct: 17206337 actgttgtcatagcgtattattataccgtcttcgcatttgaa 17206378



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                   
Query: 525     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 9259318 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 9259267

to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                            
Query: 17       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12755786 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 12755845

                                                                            
Query: 77       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
                 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 12755846 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 12755905

                                                                            
Query: 137      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 12755906 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 12755965

                                                                            
Query: 197      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12755966 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 12756025

                                                                            
Query: 257      tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12756026 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 12756085

                                                                            
Query: 317      atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
                |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12756086 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 12756145

                                                                            
Query: 377      attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
                 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12756146 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 12756205

                                                                    
Query: 437      tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 12756206 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 12756257



 Score =  737 bits (372), Expect = 0.0
 Identities = 447/472 (94%)
 Strand = Plus / Minus

                                                                            
Query: 17       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
                ||||||||| || | | ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 19545795 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactagttt 19545736

                                                                            
Query: 77       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
                 ||||||||||||||||||||||||||| | |||| ||||||||| ||||||||||||||
Sbjct: 19545735 agtaaaattcaattctctcaattcctcgacgatcgtgccaaaaacgcgagttccttttgg 19545676

                                                                            
Query: 137      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 19545675 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 19545616

                                                                            
Query: 197      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
                |||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 19545615 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttgagatctttc 19545556

                                                                            
Query: 257      tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19545555 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 19545496

                                                                            
Query: 317      atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
                |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19545495 atattgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 19545436

                                                                            
Query: 377      attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
                 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19545435 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 19545376

                                                                    
Query: 437      tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 19545375 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 19545324



 Score =  351 bits (177), Expect = 2e-93
 Identities = 195/201 (97%)
 Strand = Plus / Minus

                                                                           
Query: 158     aaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttaca 217
               |||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 3036155 aaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttaca 3036096

                                                                           
Query: 218     tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgc 277
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3036095 tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcactgc 3036036

                                                                           
Query: 278     gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagc 337
               ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3036035 gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagc 3035976

                                    
Query: 338     tcctatgactcgaatacacat 358
               |||||||||||||||||||||
Sbjct: 3035975 tcctatgactcgaatacacat 3035955



 Score =  174 bits (88), Expect = 2e-40
 Identities = 235/280 (83%), Gaps = 3/280 (1%)
 Strand = Plus / Plus

                                                                           
Query: 63      aatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaact 122
               ||||||| ||||||  || |||||||||||||||||||| |||| |||  ||||||||| 
Sbjct: 3109053 aatgaaattattttaatacaattcaattctctcaattcc-cggcgatcatgccaaaaacg 3109111

                                                                           
Query: 123     cgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcgg 182
                |||| || ||||| || | ||||||||| || |||||||  | ||  ||  ||||||| 
Sbjct: 3109112 tgagtgccctttggatttcttttttgatcgatgataaccgttgtata-tcggcatagcgt 3109170

                                                                           
Query: 183     attattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaatt 242
               |||||||||| || ||| |||||||| ||||||||||||| || ||||||  ||| ||||
Sbjct: 3109171 attattatactgt-ttcacatttgaactctttacatgtacatataattacttctctaatt 3109229

                                                                           
Query: 243     acttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaataaca 302
               |||| || ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||
Sbjct: 3109230 actttgggtctttctagaggcatttggggcactgcatctttcattacagcaacaataaca 3109289

                                                       
Query: 303     tcaccaatacgagcatatcgctgattaccagcagctccta 342
               ||| ||||| |||||||| | ||||||| |||||| ||||
Sbjct: 3109290 tcatcaatatgagcatattgttgattactagcagcaccta 3109329



 Score =  107 bits (54), Expect = 4e-20
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                           
Query: 385     ctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaa 444
               |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3109364 ctacatttaaaagggtttgaggttgaatcatattattttgatgtcaatttgttatttcaa 3109423

                 
Query: 445     tg 446
               ||
Sbjct: 3109424 tg 3109425



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                    
Query: 525      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 19545285 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 19545234



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 525      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 12756295 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 12756346



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 426     tttcaatttgttatttcaatgcaaa 450
               ||||||||||| |||||||||||||
Sbjct: 4108954 tttcaatttgtaatttcaatgcaaa 4108978

to top

>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                         
Query: 17    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71041 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 70982

                                                                         
Query: 77    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 70981 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 70922

                                                                         
Query: 137   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 70921 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 70862

                                                                         
Query: 197   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70861 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 70802

                                                                         
Query: 257   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70801 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 70742

                                                                         
Query: 317   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70741 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 70682

                                                                         
Query: 377   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70681 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 70622

                                                                 
Query: 437   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 70621 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 70570



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 70531 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 70480

to top

>dbj|AK105308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B12, full
            insert sequence
          Length = 2166

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                        
Query: 17   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1499 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 1440

                                                                        
Query: 77   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1439 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 1380

                                                                        
Query: 137  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1379 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 1320

                                                                        
Query: 197  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1319 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 1260

                                                                        
Query: 257  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 1200

                                                                        
Query: 317  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 1140

                                                                        
Query: 377  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1139 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 1080

                                                                
Query: 437  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1079 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 1028



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 525 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 990 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 939

to top

>dbj|AK071967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G06, full
            insert sequence
          Length = 1764

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Minus

                                                                        
Query: 17   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1714 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 1655

                                                                        
Query: 77   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1654 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 1595

                                                                        
Query: 137  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1594 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 1535

                                                                        
Query: 197  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1534 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 1475

                                                                        
Query: 257  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1474 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 1415

                                                                        
Query: 317  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1414 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 1355

                                                                        
Query: 377  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1354 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 1295

                                                                
Query: 437  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1294 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 1243



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                
Query: 525  tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
            ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 1205 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 1154

to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  785 bits (396), Expect = 0.0
 Identities = 453/472 (95%)
 Strand = Plus / Plus

                                                                            
Query: 17       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10375069 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 10375128

                                                                            
Query: 77       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
                 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 10375129 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 10375188

                                                                            
Query: 137      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 10375189 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 10375248

                                                                            
Query: 197      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10375249 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 10375308

                                                                            
Query: 257      tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10375309 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 10375368

                                                                            
Query: 317      atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
                |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10375369 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 10375428

                                                                            
Query: 377      attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
                 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10375429 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 10375488

                                                                    
Query: 437      tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 10375489 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 10375540



 Score =  155 bits (78), Expect = 2e-34
 Identities = 144/165 (87%), Gaps = 7/165 (4%)
 Strand = Plus / Minus

                                                                            
Query: 203      tttgaattctttacatgtacgtacaattacagctcgaattacttcgg----atctttcta 258
                ||||| ||||||||||||||||||||||||||||||  ||||||| |    |||||||||
Sbjct: 14029824 tttgagttctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttcta 14029765

                                                                            
Query: 259      gaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcat 318
                ||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 14029764 gaggcattttgggcactgcttctttgattacagcaacaataacgtcaccaatatgagcat 14029705

                                                             
Query: 319      atcgctgattaccagcagctcctatgactcgaatacacatcaatt 363
                |||  |||||||   ||||||||| || ||||||||| |||||||
Sbjct: 14029704 atcagtgattac---cagctcctaagattcgaatacatatcaatt 14029663



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 525      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 10375579 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 10375630

to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  777 bits (392), Expect = 0.0
 Identities = 452/472 (95%)
 Strand = Plus / Plus

                                                                           
Query: 17      tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
               ||||||||| || | | ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5656684 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactattgt 5656743

                                                                           
Query: 77      ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
                ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 5656744 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 5656803

                                                                           
Query: 137     gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
                || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 5656804 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 5656863

                                                                           
Query: 197     ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
               |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5656864 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 5656923

                                                                           
Query: 257     tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5656924 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 5656983

                                                                           
Query: 317     atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
               |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5656984 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 5657043

                                                                           
Query: 377     attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
                || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5657044 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 5657103

                                                                   
Query: 437     tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
               ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5657104 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 5657155



 Score =  365 bits (184), Expect = 1e-97
 Identities = 226/240 (94%)
 Strand = Plus / Plus

                                                                            
Query: 17       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20514196 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 20514255

                                                                            
Query: 77       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
                 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 20514256 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 20514315

                                                                            
Query: 137      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 20514316 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 20514375

                                                                            
Query: 197      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20514376 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 20514435



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                   
Query: 525     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 5657194 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 5657245



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 70       ctattttggtaaaattcaattctctcaattc 100
                ||||||| |||||||||||||||||||||||
Sbjct: 25823760 ctattttagtaaaattcaattctctcaattc 25823730

to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  777 bits (392), Expect = 0.0
 Identities = 452/472 (95%)
 Strand = Plus / Plus

                                                                            
Query: 17       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33497000 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 33497059

                                                                            
Query: 77       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
                 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 33497060 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 33497119

                                                                            
Query: 137      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 33497120 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 33497179

                                                                            
Query: 197      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33497180 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 33497239

                                                                            
Query: 257      tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
                ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 33497240 tagaggcatttggggcactgcatctttgattacagcaacaataacatcaccaatacgagc 33497299

                                                                            
Query: 317      atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
                |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33497300 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 33497359

                                                                            
Query: 377      attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
                 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33497360 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 33497419

                                                                    
Query: 437      tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 33497420 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 33497471



 Score =  145 bits (73), Expect = 2e-31
 Identities = 160/189 (84%)
 Strand = Plus / Minus

                                                                            
Query: 132      tttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattata 191
                ||||| || |||||||||||||| |||||  | |||||||  | |||| | |||||||||
Sbjct: 30976459 tttggatttcctttttgatcaatgataacgactgcattgttgttatagagtattattata 30976400

                                                                            
Query: 192      ccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggat 251
                |||| || ||||||||| ||  |||||||| | |||||||||| ||| |||||||  |||
Sbjct: 30976399 ccgtttttgcatttgaaatccatacatgtatgcacaattacagatcgtattacttttgat 30976340

                                                                            
Query: 252      ctttctagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaata 311
                |||||||||||||| | || || ||| ||||| |||||||||||||||||||||||||||
Sbjct: 30976339 ctttctagaggcatcttggacactgcatcttttattacagcaacaataacatcaccaata 30976280

                         
Query: 312      cgagcatat 320
                |||| ||||
Sbjct: 30976279 cgagtatat 30976271



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 101/124 (81%), Gaps = 8/124 (6%)
 Strand = Plus / Minus

                                                                            
Query: 114      ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 173
                ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 39109319 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 39109268

                                                                            
Query: 174      tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 233
                ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||| 
Sbjct: 39109267 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattact 39109208

                    
Query: 234      gctc 237
                ||||
Sbjct: 39109207 gctc 39109204



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 525      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 33497509 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 33497560



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 114      ccaaaaactcgagttccttttgggttgcctttttgat 150
                ||||||||||||||||||||||| || |||| |||||
Sbjct: 39108053 ccaaaaactcgagttccttttggatttccttcttgat 39108017



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 114      ccaaaaactcgagttccttttgggttgcctttttgat 150
                ||||||||||||||||||||||| || |||| |||||
Sbjct: 39103979 ccaaaaactcgagttccttttggatttccttcttgat 39103943

to top

>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0557A01
          Length = 147201

 Score =  777 bits (392), Expect = 0.0
 Identities = 452/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 17    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42197 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 42256

                                                                         
Query: 77    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 42257 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 42316

                                                                         
Query: 137   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 42317 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 42376

                                                                         
Query: 197   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42377 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 42436

                                                                         
Query: 257   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
             ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 42437 tagaggcatttggggcactgcatctttgattacagcaacaataacatcaccaatacgagc 42496

                                                                         
Query: 317   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42497 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 42556

                                                                         
Query: 377   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42557 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 42616

                                                                 
Query: 437   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 42617 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 42668



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 42706 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 42757

to top

>dbj|AK063122.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-E09, full
           insert sequence
          Length = 792

 Score =  777 bits (392), Expect = 0.0
 Identities = 452/472 (95%)
 Strand = Plus / Minus

                                                                       
Query: 17  tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
           ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 689

                                                                       
Query: 77  ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
            ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 688 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 629

                                                                       
Query: 137 gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
            || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 628 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 569

                                                                       
Query: 197 ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 509

                                                                       
Query: 257 tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
           ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tagaggcatttggagcactgcgtctttgattacagcaacaataacatcaccaatacgagc 449

                                                                       
Query: 317 atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 389

                                                                       
Query: 377 attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
            || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 329

                                                               
Query: 437 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 328 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 277



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 525 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 239 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 188

to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  777 bits (392), Expect = 0.0
 Identities = 452/472 (95%)
 Strand = Plus / Plus

                                                                           
Query: 17      tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
               ||||||||| || | | ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5656677 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactattgt 5656736

                                                                           
Query: 77      ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
                ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 5656737 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 5656796

                                                                           
Query: 137     gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
                || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 5656797 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 5656856

                                                                           
Query: 197     ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
               |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5656857 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 5656916

                                                                           
Query: 257     tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5656917 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 5656976

                                                                           
Query: 317     atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
               |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5656977 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 5657036

                                                                           
Query: 377     attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
                || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5657037 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 5657096

                                                                   
Query: 437     tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
               ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5657097 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 5657148



 Score =  365 bits (184), Expect = 1e-97
 Identities = 226/240 (94%)
 Strand = Plus / Plus

                                                                            
Query: 17       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20440410 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 20440469

                                                                            
Query: 77       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
                 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 20440470 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 20440529

                                                                            
Query: 137      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 20440530 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 20440589

                                                                            
Query: 197      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20440590 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 20440649



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                   
Query: 525     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 5657187 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 5657238



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 70       ctattttggtaaaattcaattctctcaattc 100
                ||||||| |||||||||||||||||||||||
Sbjct: 25751936 ctattttagtaaaattcaattctctcaattc 25751906

to top

>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 159056

 Score =  777 bits (392), Expect = 0.0
 Identities = 452/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 17    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
             ||||||||| || | | ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11207 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactattgt 11266

                                                                         
Query: 77    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 11267 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 11326

                                                                         
Query: 137   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 11327 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 11386

                                                                         
Query: 197   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11387 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 11446

                                                                         
Query: 257   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11447 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 11506

                                                                         
Query: 317   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11507 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 11566

                                                                         
Query: 377   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11567 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 11626

                                                                 
Query: 437   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 11627 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 11678



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 11717 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 11768

to top

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  777 bits (392), Expect = 0.0
 Identities = 452/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 17    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77177 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 77236

                                                                         
Query: 77    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 77237 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 77296

                                                                         
Query: 137   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 77297 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 77356

                                                                         
Query: 197   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77357 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 77416

                                                                         
Query: 257   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77417 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 77476

                                                                         
Query: 317   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 77477 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccgct 77536

                                                                         
Query: 377   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77537 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 77596

                                                                 
Query: 437   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 77597 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 77648



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 77687 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 77738

to top

>ref|XM_479424.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2154

 Score =  769 bits (388), Expect = 0.0
 Identities = 451/472 (95%)
 Strand = Plus / Minus

                                                                        
Query: 17   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1489 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 1430

                                                                        
Query: 77   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1429 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 1370

                                                                        
Query: 137  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1369 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 1310

                                                                        
Query: 197  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1309 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 1250

                                                                        
Query: 257  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1249 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 1190

                                                                        
Query: 317  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
            |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1189 atatcgctgattactagcagctcctatgactcgaatacacatcaatttttgagctccact 1130

                                                                        
Query: 377  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 1070

                                                                
Query: 437  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
            |||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 1069 tatttcaatgcaaaaggatgaaagaaatatcgtctttccagaaagaagaacc 1018



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 525 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
           ||||| ||||| || | |||||||||||||||||||||||| ||||| ||||
Sbjct: 980 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagcta 929

to top

>ref|XM_479423.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2154

 Score =  769 bits (388), Expect = 0.0
 Identities = 451/472 (95%)
 Strand = Plus / Minus

                                                                        
Query: 17   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1489 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 1430

                                                                        
Query: 77   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1429 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 1370

                                                                        
Query: 137  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1369 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 1310

                                                                        
Query: 197  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1309 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 1250

                                                                        
Query: 257  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1249 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 1190

                                                                        
Query: 317  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
            |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1189 atatcgctgattactagcagctcctatgactcgaatacacatcaatttttgagctccact 1130

                                                                        
Query: 377  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 1070

                                                                
Query: 437  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
            |||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 1069 tatttcaatgcaaaaggatgaaagaaatatcgtctttccagaaagaagaacc 1018



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 525 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
           ||||| ||||| || | |||||||||||||||||||||||| ||||| ||||
Sbjct: 980 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagcta 929

to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  769 bits (388), Expect = 0.0
 Identities = 451/472 (95%)
 Strand = Plus / Plus

                                                                            
Query: 17       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27922717 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 27922776

                                                                            
Query: 77       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
                 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 27922777 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 27922836

                                                                            
Query: 137      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 27922837 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 27922896

                                                                            
Query: 197      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27922897 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 27922956

                                                                            
Query: 257      tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27922957 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 27923016

                                                                            
Query: 317      atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
                |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 27923017 atatcgctgattactagcagctcctatgactcgaatacacatcaatttttgagctccact 27923076

                                                                            
Query: 377      attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
                 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27923077 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 27923136

                                                                    
Query: 437      tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
                |||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 27923137 tatttcaatgcaaaaggatgaaagaaatatcgtctttccagaaagaagaacc 27923188



 Score =  141 bits (71), Expect = 3e-30
 Identities = 126/143 (88%), Gaps = 1/143 (0%)
 Strand = Plus / Minus

                                                                           
Query: 66      gaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcga 125
               ||||||||||| |||||||||||||||||||||| |||| | |||||||||||||| | |
Sbjct: 4509148 gaaactattttagtaaaattcaattctctcaattactcgacgatcgcgccaaaaacgcaa 4509089

                                                                           
Query: 126     gttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggatt 185
               ||||| ||||| || ||||||| |  ||| ||| |||  ||||||||||||||||| |||
Sbjct: 4509088 gttccatttggatttccttttt-actaatgatatccgttgcattgtcatcatagcgtatt 4509030

                                      
Query: 186     attataccgtcttcgcatttgaa 208
               |||||||||||||||||||||||
Sbjct: 4509029 attataccgtcttcgcatttgaa 4509007



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                    
Query: 525      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
                ||||| ||||| || | |||||||||||||||||||||||| ||||| ||||
Sbjct: 27923226 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagcta 27923277

to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  769 bits (388), Expect = 0.0
 Identities = 451/472 (95%)
 Strand = Plus / Minus

                                                                            
Query: 17       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23181868 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 23181809

                                                                            
Query: 77       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
                 ||||||||||||||||||||||||||||| |||| |||||||||  |||||||||||||
Sbjct: 23181808 agtaaaattcaattctctcaattcctcggcgatcgtgccaaaaacgtgagttccttttgg 23181749

                                                                            
Query: 137      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 23181748 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 23181689

                                                                            
Query: 197      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23181688 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 23181629

                                                                            
Query: 257      tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23181628 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 23181569

                                                                            
Query: 317      atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
                |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23181568 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 23181509

                                                                            
Query: 377      attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
                 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23181508 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 23181449

                                                                    
Query: 437      tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 23181448 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 23181397



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                    
Query: 525      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 23181359 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 23181308

to top

>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E03
          Length = 159980

 Score =  769 bits (388), Expect = 0.0
 Identities = 451/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 17    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86075 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 86134

                                                                         
Query: 77    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 86135 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 86194

                                                                         
Query: 137   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 86195 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 86254

                                                                         
Query: 197   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86255 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 86314

                                                                         
Query: 257   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86315 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 86374

                                                                         
Query: 317   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
             |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 86375 atatcgctgattactagcagctcctatgactcgaatacacatcaatttttgagctccact 86434

                                                                         
Query: 377   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86435 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 86494

                                                                 
Query: 437   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             |||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 86495 tatttcaatgcaaaaggatgaaagaaatatcgtctttccagaaagaagaacc 86546



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| || | |||||||||||||||||||||||| ||||| ||||
Sbjct: 86584 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagcta 86635

to top

>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_D04
          Length = 143407

 Score =  769 bits (388), Expect = 0.0
 Identities = 451/472 (95%)
 Strand = Plus / Plus

                                                                         
Query: 17    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12051 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 12110

                                                                         
Query: 77    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 12111 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 12170

                                                                         
Query: 137   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 12171 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 12230

                                                                         
Query: 197   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12231 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 12290

                                                                         
Query: 257   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12291 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 12350

                                                                         
Query: 317   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
             |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 12351 atatcgctgattactagcagctcctatgactcgaatacacatcaatttttgagctccact 12410

                                                                         
Query: 377   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12411 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 12470

                                                                 
Query: 437   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             |||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 12471 tatttcaatgcaaaaggatgaaagaaatatcgtctttccagaaagaagaacc 12522



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| || | |||||||||||||||||||||||| ||||| ||||
Sbjct: 12560 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagcta 12611

to top

>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0417D05
          Length = 165752

 Score =  769 bits (388), Expect = 0.0
 Identities = 451/472 (95%)
 Strand = Plus / Minus

                                                                          
Query: 17     tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
              ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132516 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 132457

                                                                          
Query: 77     ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
               ||||||||||||||||||||||||||||| |||| |||||||||  |||||||||||||
Sbjct: 132456 agtaaaattcaattctctcaattcctcggcgatcgtgccaaaaacgtgagttccttttgg 132397

                                                                          
Query: 137    gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
               || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 132396 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 132337

                                                                          
Query: 197    ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
              |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132336 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 132277

                                                                          
Query: 257    tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132276 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 132217

                                                                          
Query: 317    atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
              |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132216 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 132157

                                                                          
Query: 377    attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
               || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132156 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 132097

                                                                  
Query: 437    tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
              ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 132096 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 132045



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                  
Query: 525    tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
              ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 132007 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 131956

to top

>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0642B07
          Length = 139297

 Score =  769 bits (388), Expect = 0.0
 Identities = 451/472 (95%)
 Strand = Plus / Minus

                                                                         
Query: 17    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16630 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 16571

                                                                         
Query: 77    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
              ||||||||||||||||||||||||||||| |||| |||||||||  |||||||||||||
Sbjct: 16570 agtaaaattcaattctctcaattcctcggcgatcgtgccaaaaacgtgagttccttttgg 16511

                                                                         
Query: 137   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 16510 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 16451

                                                                         
Query: 197   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16450 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 16391

                                                                         
Query: 257   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16390 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 16331

                                                                         
Query: 317   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16330 atatcgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 16271

                                                                         
Query: 377   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16270 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 16211

                                                                 
Query: 437   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 16210 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 16159



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 16121 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 16070

to top

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  759 bits (383), Expect = 0.0
 Identities = 452/475 (95%)
 Strand = Plus / Plus

                                                                       
Query: 14  ttctttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactat 73
           |||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ttctttgatctatatctcgtctactagtatttataatacttcaggagctaatgaaactat 168

                                                                       
Query: 74  tttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttt 133
           ||| ||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct: 169 tttagtataattcaattctcttaattcttcggcaaccgcgccaaaaactcgagttccttt 228

                                                                       
Query: 134 tgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattatacc 193
           ||| || |||||||||||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 229 tggatttcctttttgatcaatgataactgctgcattgtcatcatagcgtattattatacc 288

                                                                       
Query: 194 gtcttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatct 253
           ||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 289 gtcgtcgcctttgaattctttacgtgtacgtacaattacagctcgaattacttcggatct 348

                                                                       
Query: 254 ttctagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacg 313
           |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 349 ttctagaggcatttggggcactgcgtctttgattacagcaataataacatcaccaatacg 408

                                                                       
Query: 314 agcatatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctcc 373
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 409 agcatatcgctgattaccagcggctcctatgactcgaatacacatcaattttcgagctcc 468

                                                                       
Query: 374 actattgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatt 433
           ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 469 actgttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttccatt 528

                                                                  
Query: 434 tgttatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tgttatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 583



 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                       
Query: 514 ttttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggccg 573
           |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 610 ttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggcag 669

              
Query: 574 cta 576
           |||
Sbjct: 670 cta 672

to top

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  759 bits (383), Expect = 0.0
 Identities = 452/475 (95%)
 Strand = Plus / Plus

                                                                         
Query: 14    ttctttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactat 73
             |||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 79666 ttctttgatctatatctcgtctactagtatttataatacttcaggagctaatgaaactat 79725

                                                                         
Query: 74    tttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttt 133
             ||| ||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct: 79726 tttagtataattcaattctcttaattcttcggcaaccgcgccaaaaactcgagttccttt 79785

                                                                         
Query: 134   tgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattatacc 193
             ||| || |||||||||||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 79786 tggatttcctttttgatcaatgataactgctgcattgtcatcatagcgtattattatacc 79845

                                                                         
Query: 194   gtcttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatct 253
             ||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 79846 gtcgtcgcctttgaattctttacgtgtacgtacaattacagctcgaattacttcggatct 79905

                                                                         
Query: 254   ttctagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacg 313
             |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 79906 ttctagaggcatttggggcactgcgtctttgattacagcaataataacatcaccaatacg 79965

                                                                         
Query: 314   agcatatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctcc 373
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 79966 agcatatcgctgattaccagcggctcctatgactcgaatacacatcaattttcgagctcc 80025

                                                                         
Query: 374   actattgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatt 433
             ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 80026 actgttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttccatt 80085

                                                                    
Query: 434   tgttatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80086 tgttatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 80140



 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                         
Query: 514   ttttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggccg 573
             |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 80167 ttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggcag 80226

                
Query: 574   cta 576
             |||
Sbjct: 80227 cta 80229

to top

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  751 bits (379), Expect = 0.0
 Identities = 451/475 (94%)
 Strand = Plus / Plus

                                                                         
Query: 14    ttctttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactat 73
             |||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 79008 ttctttgatctatatctcgtctactagtatttataatacttcaggagctaatgaaactat 79067

                                                                         
Query: 74    tttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttt 133
             ||| || |||||||||||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct: 79068 tttagtcaaattcaattctcttaattcttcggcaaccgcgccaaaaactcgagttccttt 79127

                                                                         
Query: 134   tgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattatacc 193
             ||| || |||||||||||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 79128 tggatttcctttttgatcaatgataactgctgcattgtcatcatagcgtattattatacc 79187

                                                                         
Query: 194   gtcttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatct 253
             ||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 79188 gtcgtcgcctttgaattctttacgtgtacgtacaattacagctcgaattacttcggatct 79247

                                                                         
Query: 254   ttctagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacg 313
             |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 79248 ttctagaggcatttggggcactgcgtctttgattacagcaataataacatcaccaatacg 79307

                                                                         
Query: 314   agcatatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctcc 373
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 79308 agcatatcgctgattaccagcggctcctatgactcgaatacacatcaattttcgagctcc 79367

                                                                         
Query: 374   actattgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatt 433
             ||| || |||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 79368 actgttatctgctacatttaaaagggtctgaggttgaatcatattatttggatttccatt 79427

                                                                    
Query: 434   tgttatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79428 tgttatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 79482



 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                         
Query: 514   ttttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggccg 573
             |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 79509 ttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggcag 79568

                
Query: 574   cta 576
             |||
Sbjct: 79569 cta 79571

to top

>emb|X06734.1|CHZMRP14 Maize chloroplast genes for ribosomal proteins L14, S8 and L16
           partial
          Length = 1287

 Score =  751 bits (379), Expect = 0.0
 Identities = 451/475 (94%)
 Strand = Plus / Minus

                                                                       
Query: 14  ttctttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactat 73
           |||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttctttgatctatatctcgtctactagtatttataatacttcaggagctaatgaaactat 602

                                                                       
Query: 74  tttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttt 133
           ||| || |||||||||||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct: 601 tttagtcaaattcaattctcttaattcttcggcaaccgcgccaaaaactcgagttccttt 542

                                                                       
Query: 134 tgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattatacc 193
           ||| || |||||||||||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 541 tggatttcctttttgatcaatgataactgctgcattgtcatcatagcgtattattatacc 482

                                                                       
Query: 194 gtcttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatct 253
           ||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtcgtcgcctttgaattctttacgtgtacgtacaattacagctcgaattacttcggatct 422

                                                                       
Query: 254 ttctagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacg 313
           |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 421 ttctagaggcatttggggcactgcgtctttgattacagcaataataacatcaccaatacg 362

                                                                       
Query: 314 agcatatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctcc 373
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agcatatcgctgattaccagcggctcctatgactcgaatacacatcaattttcgagctcc 302

                                                                       
Query: 374 actattgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatt 433
           ||| || |||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 301 actgttatctgctacatttaaaagggtctgaggttgaatcatattatttggatttccatt 242

                                                                  
Query: 434 tgttatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgttatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 187



 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                       
Query: 514 ttttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggccg 573
           |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 160 ttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggcag 101

              
Query: 574 cta 576
           |||
Sbjct: 100 cta 98

to top

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  751 bits (379), Expect = 0.0
 Identities = 451/475 (94%)
 Strand = Plus / Plus

                                                                         
Query: 14    ttctttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactat 73
             |||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 79024 ttctttgatctatatctcgtctactagtatttataatacttcaggagctaatgaaactat 79083

                                                                         
Query: 74    tttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttt 133
             ||| || |||||||||||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct: 79084 tttagtcaaattcaattctcttaattcttcggcaaccgcgccaaaaactcgagttccttt 79143

                                                                         
Query: 134   tgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattatacc 193
             ||| || |||||||||||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 79144 tggatttcctttttgatcaatgataactgctgcattgtcatcatagcgtattattatacc 79203

                                                                         
Query: 194   gtcttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatct 253
             ||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 79204 gtcgtcgcctttgaattctttacgtgtacgtacaattacagctcgaattacttcggatct 79263

                                                                         
Query: 254   ttctagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacg 313
             |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 79264 ttctagaggcatttggggcactgcgtctttgattacagcaataataacatcaccaatacg 79323

                                                                         
Query: 314   agcatatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctcc 373
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 79324 agcatatcgctgattaccagcggctcctatgactcgaatacacatcaattttcgagctcc 79383

                                                                         
Query: 374   actattgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatt 433
             ||| || |||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 79384 actgttatctgctacatttaaaagggtctgaggttgaatcatattatttggatttccatt 79443

                                                                    
Query: 434   tgttatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79444 tgttatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 79498



 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                         
Query: 514   ttttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggccg 573
             |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 79525 ttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggcag 79584

                
Query: 574   cta 576
             |||
Sbjct: 79585 cta 79587

to top

>ref|XM_450630.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 793

 Score =  745 bits (376), Expect = 0.0
 Identities = 448/472 (94%)
 Strand = Plus / Minus

                                                                       
Query: 17  tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
           ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 690

                                                                       
Query: 77  ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
            ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 689 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 630

                                                                       
Query: 137 gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
            || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 629 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 570

                                                                       
Query: 197 ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 510

                                                                       
Query: 257 tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
           ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tagaggcatttggggcactacgtctttgattacagcaacaataacatcaccaatacgagc 450

                                                                       
Query: 317 atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
           |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 449 atatcgctgactactagcagctcctatgactcgaatacacattaattttcgagctccagt 390

                                                                       
Query: 377 attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 389 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttat 330

                                                               
Query: 437 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 329 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 278



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 525 tatatctctaatcgaataaattgacttcgtatgggcatttt 565
           ||||| ||||| |||| ||||||||||||||||||||||||
Sbjct: 239 tatatttctaaccgaagaaattgacttcgtatgggcatttt 199

to top

>ref|XM_450631.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2141

 Score =  745 bits (376), Expect = 0.0
 Identities = 448/472 (94%)
 Strand = Plus / Minus

                                                                        
Query: 17   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1477 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 1418

                                                                        
Query: 77   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1417 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 1358

                                                                        
Query: 137  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1357 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 1298

                                                                        
Query: 197  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 1238

                                                                        
Query: 257  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
            ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1237 tagaggcatttggggcactacgtctttgattacagcaacaataacatcaccaatacgagc 1178

                                                                        
Query: 317  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
            |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 1177 atatcgctgactactagcagctcctatgactcgaatacacattaattttcgagctccagt 1118

                                                                        
Query: 377  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
             || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1117 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttat 1058

                                                                
Query: 437  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1057 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 1006



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 525 tatatctctaatcgaataaattgacttcgtatgggcatttt 565
           ||||| ||||| |||| ||||||||||||||||||||||||
Sbjct: 967 tatatttctaaccgaagaaattgacttcgtatgggcatttt 927

to top

>ref|XM_506652.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1001_G09.24 mRNA
          Length = 1742

 Score =  745 bits (376), Expect = 0.0
 Identities = 448/472 (94%)
 Strand = Plus / Minus

                                                                        
Query: 17   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1692 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 1633

                                                                        
Query: 77   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1632 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 1573

                                                                        
Query: 137  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1572 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 1513

                                                                        
Query: 197  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1512 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 1453

                                                                        
Query: 257  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
            ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1452 tagaggcatttggggcactacgtctttgattacagcaacaataacatcaccaatacgagc 1393

                                                                        
Query: 317  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
            |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 1392 atatcgctgactactagcagctcctatgactcgaatacacattaattttcgagctccagt 1333

                                                                        
Query: 377  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
             || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1332 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttat 1273

                                                                
Query: 437  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1272 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 1221



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 525  tatatctctaatcgaataaattgacttcgtatgggcatttt 565
            ||||| ||||| |||| ||||||||||||||||||||||||
Sbjct: 1182 tatatttctaaccgaagaaattgacttcgtatgggcatttt 1142

to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  745 bits (376), Expect = 0.0
 Identities = 448/472 (94%)
 Strand = Plus / Minus

                                                                            
Query: 17       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11896649 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 11896590

                                                                            
Query: 77       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
                 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 11896589 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 11896530

                                                                            
Query: 137      gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
                 || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 11896529 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 11896470

                                                                            
Query: 197      ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11896469 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 11896410

                                                                            
Query: 257      tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
                ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 11896409 tagaggcatttggggcactacgtctttgattacagcaacaataacatcaccaatacgagc 11896350

                                                                            
Query: 317      atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
                |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 11896349 atatcgctgactactagcagctcctatgactcgaatacacattaattttcgagctccagt 11896290

                                                                            
Query: 377      attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
                 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11896289 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttat 11896230

                                                                    
Query: 437      tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 11896229 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 11896178



 Score =  186 bits (94), Expect = 5e-44
 Identities = 146/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                            
Query: 47       taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 106
                |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 20862633 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattccttggc 20862692

                                                                            
Query: 107      aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 166
                 || ||||||||||| | |||||| ||||| || ||||||| |||||| |||||||||||
Sbjct: 20862693 gattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcagc 20862751

                                                          
Query: 167      attgtcatcatagcggattattataccgtcttcgcatttgaa 208
                |||||  |||||||| ||||||||||||||||||||||||||
Sbjct: 20862752 attgttgtcatagcgtattattataccgtcttcgcatttgaa 20862793



 Score =  153 bits (77), Expect = 8e-34
 Identities = 80/81 (98%)
 Strand = Plus / Minus

                                                                            
Query: 408      tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 467
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14456068 tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 14456009

                                     
Query: 468      gtctttccagaaagaaaaacc 488
                |||||||||||||||| ||||
Sbjct: 14456008 gtctttccagaaagaagaacc 14455988



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                    
Query: 525      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 14455950 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 14455899



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                         
Query: 525      tatatctctaatcgaataaattgacttcgtatgggcatttt 565
                ||||| ||||| |||| ||||||||||||||||||||||||
Sbjct: 11896139 tatatttctaaccgaagaaattgacttcgtatgggcatttt 11896099

to top

>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1001_G09
          Length = 118018

 Score =  745 bits (376), Expect = 0.0
 Identities = 448/472 (94%)
 Strand = Plus / Minus

                                                                         
Query: 17    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78139 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 78080

                                                                         
Query: 77    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 78079 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 78020

                                                                         
Query: 137   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 78019 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 77960

                                                                         
Query: 197   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77959 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 77900

                                                                         
Query: 257   tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
             ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 77899 tagaggcatttggggcactacgtctttgattacagcaacaataacatcaccaatacgagc 77840

                                                                         
Query: 317   atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
             |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 77839 atatcgctgactactagcagctcctatgactcgaatacacattaattttcgagctccagt 77780

                                                                         
Query: 377   attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
              || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 77779 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttat 77720

                                                                 
Query: 437   tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 77719 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 77668



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcatttt 565
             ||||| ||||| |||| ||||||||||||||||||||||||
Sbjct: 77629 tatatttctaaccgaagaaattgacttcgtatgggcatttt 77589

to top

>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0441A12
          Length = 185437

 Score =  745 bits (376), Expect = 0.0
 Identities = 448/472 (94%)
 Strand = Plus / Minus

                                                                        
Query: 17   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
            ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 1070

                                                                        
Query: 77   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1069 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 1010

                                                                        
Query: 137  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1009 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 950

                                                                        
Query: 197  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949  ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 890

                                                                        
Query: 257  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
            ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 889  tagaggcatttggggcactacgtctttgattacagcaacaataacatcaccaatacgagc 830

                                                                        
Query: 317  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
            |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 829  atatcgctgactactagcagctcctatgactcgaatacacattaattttcgagctccagt 770

                                                                        
Query: 377  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
             || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 769  gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttat 710

                                                                
Query: 437  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 709  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 658



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 525 tatatctctaatcgaataaattgacttcgtatgggcatttt 565
           ||||| ||||| |||| ||||||||||||||||||||||||
Sbjct: 619 tatatttctaaccgaagaaattgacttcgtatgggcatttt 579

to top

>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12,
              complete sequence
          Length = 157069

 Score =  737 bits (372), Expect = 0.0
 Identities = 447/472 (94%)
 Strand = Plus / Minus

                                                                          
Query: 17     tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
              ||||||||| || | | ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 146507 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactagttt 146448

                                                                          
Query: 77     ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
               ||||||||||||||||||||||||||| | |||| ||||||||| ||||||||||||||
Sbjct: 146447 agtaaaattcaattctctcaattcctcgacgatcgtgccaaaaacgcgagttccttttgg 146388

                                                                          
Query: 137    gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
               || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 146387 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 146328

                                                                          
Query: 197    ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
              |||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 146327 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttgagatctttc 146268

                                                                          
Query: 257    tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146267 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 146208

                                                                          
Query: 317    atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
              |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146207 atattgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 146148

                                                                          
Query: 377    attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
               || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146147 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 146088

                                                                  
Query: 437    tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
              ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 146087 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 146036



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                  
Query: 525    tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
              ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 145997 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 145946

to top

>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11,
            complete sequence
          Length = 102567

 Score =  737 bits (372), Expect = 0.0
 Identities = 447/472 (94%)
 Strand = Plus / Minus

                                                                        
Query: 17   tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
            ||||||||| || | | ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5694 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactagttt 5635

                                                                        
Query: 77   ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
             ||||||||||||||||||||||||||| | |||| ||||||||| ||||||||||||||
Sbjct: 5634 agtaaaattcaattctctcaattcctcgacgatcgtgccaaaaacgcgagttccttttgg 5575

                                                                        
Query: 137  gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
             || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 5574 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 5515

                                                                        
Query: 197  ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
            |||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 5514 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttgagatctttc 5455

                                                                        
Query: 257  tagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagc 316
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5454 tagaggcatttggggcactgcgtctttgattacagcaacaataacatcaccaatacgagc 5395

                                                                        
Query: 317  atatcgctgattaccagcagctcctatgactcgaatacacatcaattttcgagctccact 376
            |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5394 atattgctgattactagcagctcctatgactcgaatacacatcaattttcgagctccact 5335

                                                                        
Query: 377  attgtctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 436
             || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5334 gttatctgctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgt 5275

                                                                
Query: 437  tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaacc 488
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5274 tatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaagaacc 5223



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                
Query: 525  tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
            ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 5184 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 5133

to top

>ref|NM_190859.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 372

 Score =  618 bits (312), Expect = e-174
 Identities = 357/372 (95%)
 Strand = Plus / Minus

                                                                       
Query: 44  ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 103
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 372 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 313

                                                                       
Query: 104 ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 163
           ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 312 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 253

                                                                       
Query: 164 agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 223
            |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 252 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 193

                                                                       
Query: 224 tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 283
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 192 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcatcttt 133

                                                                       
Query: 284 gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 343
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 132 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 73

                                                                       
Query: 344 gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 403
           ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 72  gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 13

                       
Query: 404 aggttgaatcat 415
           ||||||||||||
Sbjct: 12  aggttgaatcat 1

to top

>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete
             sequence
          Length = 141691

 Score =  539 bits (272), Expect = e-150
 Identities = 296/304 (97%)
 Strand = Plus / Plus

                                                                         
Query: 177   tagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagct 236
             ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 14317 tagcgtattattataccgtcttcgcatttgaactctttacatgtacgtacaattacagct 14376

                                                                         
Query: 237   cgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaaca 296
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 14377 cgaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaaca 14436

                                                                         
Query: 297   ataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacac 356
             |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 14437 ataacatcaccaatacgagcatatcgctgattactagcagctcttatgactcgaatacac 14496

                                                                         
Query: 357   atcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcata 416
             |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 14497 atcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcata 14556

                                                                         
Query: 417   ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttcca 476
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 14557 ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtttttcca 14616

                 
Query: 477   gaaa 480
             ||||
Sbjct: 14617 gaaa 14620



 Score =  202 bits (102), Expect = 9e-49
 Identities = 148/162 (91%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                         
Query: 17    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13978 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 14037

                                                                         
Query: 77    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
              ||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||
Sbjct: 14038 agtaaaattcaattctctcaattcctaggcgatcgcgccaaaaacgcgagttccttttgg 14097

                                                       
Query: 137   gttgcctttttgatcaattataaccgcagcattgtcatcata 178
              || ||||||| |||||| |||||||| |||||||| |||||
Sbjct: 14098 atttccttttt-atcaatgataaccgctgcattgtcgtcata 14138



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| |||| ||||||||||| |||||||||||| ||||| ||||
Sbjct: 14667 tatatttctaaccgaagaaattgacttcatatgggcattttgctggcagcta 14718

to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  539 bits (272), Expect = e-150
 Identities = 296/304 (97%)
 Strand = Plus / Plus

                                                                            
Query: 177      tagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagct 236
                ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 24638131 tagcgtattattataccgtcttcgcatttgaactctttacatgtacgtacaattacagct 24638190

                                                                            
Query: 237      cgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaaca 296
                ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 24638191 cgaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaaca 24638250

                                                                            
Query: 297      ataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacac 356
                |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 24638251 ataacatcaccaatacgagcatatcgctgattactagcagctcttatgactcgaatacac 24638310

                                                                            
Query: 357      atcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcata 416
                |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 24638311 atcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcata 24638370

                                                                            
Query: 417      ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttcca 476
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 24638371 ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtttttcca 24638430

                    
Query: 477      gaaa 480
                ||||
Sbjct: 24638431 gaaa 24638434



 Score =  462 bits (233), Expect = e-127
 Identities = 269/281 (95%)
 Strand = Plus / Plus

                                                                            
Query: 167      attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 226
                |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32000439 attgtcgttatagcgtattattataccgtcttcgcatttgaattctttacatgtacgtac 32000498

                                                                            
Query: 227      aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 286
                ||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 32000499 aattatagctcgaattacttcggatctttctagaggcatttaggacactgcgtctttgat 32000558

                                                                            
Query: 287      tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 346
                |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 32000559 tacagcaataataacatcaccaatacgagcatatcgctgattactagcagctcctatgac 32000618

                                                                            
Query: 347      tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 406
                |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 32000619 tcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctgagg 32000678

                                                         
Query: 407      ttgaatcatattattttgatttcaatttgttatttcaatgc 447
                |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 32000679 ttgaatcatattattttgattttaatttgttatttcaatgc 32000719



 Score =  202 bits (102), Expect = 9e-49
 Identities = 148/162 (91%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                            
Query: 17       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24637792 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 24637851

                                                                            
Query: 77       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
                 ||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||
Sbjct: 24637852 agtaaaattcaattctctcaattcctaggcgatcgcgccaaaaacgcgagttccttttgg 24637911

                                                          
Query: 137      gttgcctttttgatcaattataaccgcagcattgtcatcata 178
                 || ||||||| |||||| |||||||| |||||||| |||||
Sbjct: 24637912 atttccttttt-atcaatgataaccgctgcattgtcgtcata 24637952



 Score =  163 bits (82), Expect = 8e-37
 Identities = 143/162 (88%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                            
Query: 47       taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 106
                |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 27557409 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattccttggc 27557468

                                                                            
Query: 107      aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 166
                 || || |||||||| | |||||| ||||| || ||||||| |||||| ||||||| |||
Sbjct: 27557469 gattgcaccaaaaacgcaagttccatttggatttccttttt-atcaatgataaccgtagc 27557527

                                                          
Query: 167      attgtcatcatagcggattattataccgtcttcgcatttgaa 208
                | |||| |||||||| |||||||||| |||||||||||||||
Sbjct: 27557528 actgtcgtcatagcgtattattatactgtcttcgcatttgaa 27557569



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                    
Query: 525      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
                ||||| ||||| |||| ||||||||||| |||||||||||| ||||| ||||
Sbjct: 24638481 tatatttctaaccgaagaaattgacttcatatgggcattttgctggcagcta 24638532

to top

>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from
             chromosome 3 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 136470

 Score =  539 bits (272), Expect = e-150
 Identities = 296/304 (97%)
 Strand = Plus / Plus

                                                                         
Query: 177   tagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagct 236
             ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 70177 tagcgtattattataccgtcttcgcatttgaactctttacatgtacgtacaattacagct 70236

                                                                         
Query: 237   cgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaaca 296
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 70237 cgaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaaca 70296

                                                                         
Query: 297   ataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacac 356
             |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 70297 ataacatcaccaatacgagcatatcgctgattactagcagctcttatgactcgaatacac 70356

                                                                         
Query: 357   atcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcata 416
             |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 70357 atcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcata 70416

                                                                         
Query: 417   ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttcca 476
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 70417 ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtttttcca 70476

                 
Query: 477   gaaa 480
             ||||
Sbjct: 70477 gaaa 70480



 Score =  202 bits (102), Expect = 9e-49
 Identities = 148/162 (91%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                         
Query: 17    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69838 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 69897

                                                                         
Query: 77    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
              ||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||
Sbjct: 69898 agtaaaattcaattctctcaattcctaggcgatcgcgccaaaaacgcgagttccttttgg 69957

                                                       
Query: 137   gttgcctttttgatcaattataaccgcagcattgtcatcata 178
              || ||||||| |||||| |||||||| |||||||| |||||
Sbjct: 69958 atttccttttt-atcaatgataaccgctgcattgtcgtcata 69998



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| |||| ||||||||||| |||||||||||| ||||| ||||
Sbjct: 70527 tatatttctaaccgaagaaattgacttcatatgggcattttgctggcagcta 70578

to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  539 bits (272), Expect = e-150
 Identities = 296/304 (97%)
 Strand = Plus / Plus

                                                                            
Query: 177      tagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagct 236
                ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 24555600 tagcgtattattataccgtcttcgcatttgaactctttacatgtacgtacaattacagct 24555659

                                                                            
Query: 237      cgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaaca 296
                ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 24555660 cgaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaaca 24555719

                                                                            
Query: 297      ataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacac 356
                |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 24555720 ataacatcaccaatacgagcatatcgctgattactagcagctcttatgactcgaatacac 24555779

                                                                            
Query: 357      atcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcata 416
                |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 24555780 atcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcata 24555839

                                                                            
Query: 417      ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttcca 476
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 24555840 ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtttttcca 24555899

                    
Query: 477      gaaa 480
                ||||
Sbjct: 24555900 gaaa 24555903



 Score =  462 bits (233), Expect = e-127
 Identities = 269/281 (95%)
 Strand = Plus / Plus

                                                                            
Query: 167      attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 226
                |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32090951 attgtcgttatagcgtattattataccgtcttcgcatttgaattctttacatgtacgtac 32091010

                                                                            
Query: 227      aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 286
                ||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 32091011 aattatagctcgaattacttcggatctttctagaggcatttaggacactgcgtctttgat 32091070

                                                                            
Query: 287      tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 346
                |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 32091071 tacagcaataataacatcaccaatacgagcatatcgctgattactagcagctcctatgac 32091130

                                                                            
Query: 347      tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 406
                |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 32091131 tcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctgagg 32091190

                                                         
Query: 407      ttgaatcatattattttgatttcaatttgttatttcaatgc 447
                |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 32091191 ttgaatcatattattttgattttaatttgttatttcaatgc 32091231



 Score =  202 bits (102), Expect = 9e-49
 Identities = 148/162 (91%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                            
Query: 17       tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
                ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24555261 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 24555320

                                                                            
Query: 77       ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
                 ||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||
Sbjct: 24555321 agtaaaattcaattctctcaattcctaggcgatcgcgccaaaaacgcgagttccttttgg 24555380

                                                          
Query: 137      gttgcctttttgatcaattataaccgcagcattgtcatcata 178
                 || ||||||| |||||| |||||||| |||||||| |||||
Sbjct: 24555381 atttccttttt-atcaatgataaccgctgcattgtcgtcata 24555421



 Score =  163 bits (82), Expect = 8e-37
 Identities = 143/162 (88%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                            
Query: 47       taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 106
                |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 27648732 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattccttggc 27648791

                                                                            
Query: 107      aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 166
                 || || |||||||| | |||||| ||||| || ||||||| |||||| ||||||| |||
Sbjct: 27648792 gattgcaccaaaaacgcaagttccatttggatttccttttt-atcaatgataaccgtagc 27648850

                                                          
Query: 167      attgtcatcatagcggattattataccgtcttcgcatttgaa 208
                | |||| |||||||| |||||||||| |||||||||||||||
Sbjct: 27648851 actgtcgtcatagcgtattattatactgtcttcgcatttgaa 27648892



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                    
Query: 525      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
                ||||| ||||| |||| ||||||||||| |||||||||||| ||||| ||||
Sbjct: 24555950 tatatttctaaccgaagaaattgacttcatatgggcattttgctggcagcta 24556001

to top

>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete
             sequence
          Length = 144306

 Score =  462 bits (233), Expect = e-127
 Identities = 269/281 (95%)
 Strand = Plus / Plus

                                                                         
Query: 167   attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 226
             |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92391 attgtcgttatagcgtattattataccgtcttcgcatttgaattctttacatgtacgtac 92450

                                                                         
Query: 227   aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 286
             ||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 92451 aattatagctcgaattacttcggatctttctagaggcatttaggacactgcgtctttgat 92510

                                                                         
Query: 287   tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 346
             |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 92511 tacagcaataataacatcaccaatacgagcatatcgctgattactagcagctcctatgac 92570

                                                                         
Query: 347   tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 406
             |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 92571 tcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctgagg 92630

                                                      
Query: 407   ttgaatcatattattttgatttcaatttgttatttcaatgc 447
             |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 92631 ttgaatcatattattttgattttaatttgttatttcaatgc 92671

to top

>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence,
            complete sequence
          Length = 178158

 Score =  462 bits (233), Expect = e-127
 Identities = 269/281 (95%)
 Strand = Plus / Plus

                                                                        
Query: 167  attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 226
            |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 attgtcgttatagcgtattattataccgtcttcgcatttgaattctttacatgtacgtac 1623

                                                                        
Query: 227  aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 286
            ||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 1624 aattatagctcgaattacttcggatctttctagaggcatttaggacactgcgtctttgat 1683

                                                                        
Query: 287  tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 346
            |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1684 tacagcaataataacatcaccaatacgagcatatcgctgattactagcagctcctatgac 1743

                                                                        
Query: 347  tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 406
            |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 1744 tcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctgagg 1803

                                                     
Query: 407  ttgaatcatattattttgatttcaatttgttatttcaatgc 447
            |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1804 ttgaatcatattattttgattttaatttgttatttcaatgc 1844

to top

>gb|DQ069425.1| Typha latifolia ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score =  402 bits (203), Expect = e-109
 Identities = 325/365 (89%), Gaps = 3/365 (0%)
 Strand = Plus / Minus

                                                                       
Query: 51  acttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggcaatc 110
           |||||||||||||||||||||||||| ||||||||||| | ||||||||||   || |||
Sbjct: 362 acttcaggagctaatgaaactattttagtaaaattcaactgtctcaattcccgagcgatc 303

                                                                       
Query: 111 gcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattg 170
           || ||||||||||||||||||||||| || |||| ||||||||| | ||| |||||||||
Sbjct: 302 gcaccaaaaactcgagttccttttggatttccttcttgatcaatgacaactgcagcattg 243

                                                                       
Query: 171 tcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaatt 230
           |||||||| || ||||| ||||||| ||| | ||||| ||||||||||||||||||||||
Sbjct: 242 tcatcatatcgtattatgataccgttttcacgtttgagttctttacatgtacgtacaatt 183

                                                                       
Query: 231 acagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattaca 290
           ||||||| ||||||||| ||||||||||||||||| | ||| | ||| ||||||||||||
Sbjct: 182 acagctctaattacttctgatctttctagaggcatattgggaactgcttctttgattaca 123

                                                                       
Query: 291 gcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcga 350
           ||||||||||||||||||||| |||||||||| |||||||   |||||||||||| ||||
Sbjct: 122 gcaacaataacatcaccaatatgagcatatcggtgattac---cagctcctatgattcga 66

                                                                       
Query: 351 atacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttga 410
           |||||||| |||||||||||||| || || || |||||||| ||||||||||||||||||
Sbjct: 65  atacacattaattttcgagctccgctgttatccgctacattcaaaagggtctgaggttga 6

                
Query: 411 atcat 415
           |||||
Sbjct: 5   atcat 1

to top

>gb|DQ069426.1| Yucca schidigera ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score =  387 bits (195), Expect = e-104
 Identities = 326/369 (88%), Gaps = 3/369 (0%)
 Strand = Plus / Minus

                                                                       
Query: 47  taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 106
           |||||| || |||||||||||||||||||| ||||||||||| | ||||||||||   ||
Sbjct: 366 taatacctcgggagctaatgaaactattttagtaaaattcaactgtctcaattcccgagc 307

                                                                       
Query: 107 aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 166
           |||||| ||||||| |||||||||||||||||| |||| ||||||||| | |||||| ||
Sbjct: 306 aatcgccccaaaaattcgagttccttttgggtttccttcttgatcaatgacaaccgctgc 247

                                                                       
Query: 167 attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 226
           |||||||||||| || ||||| |||||||  || | ||||| ||||||||||||||||||
Sbjct: 246 attgtcatcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtac 187

                                                                       
Query: 227 aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 286
           ||||||||||| ||||||||| ||||||||||||||||| | ||||| ||| ||||||||
Sbjct: 186 aattacagctctaattacttctgatctttctagaggcatattgggcactgcttctttgat 127

                                                                       
Query: 287 tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 346
           ||||||||||||||| ||||||||| |||||||||| |||||||   |||| ||||||| 
Sbjct: 126 tacagcaacaataacgtcaccaatatgagcatatcggtgattac---cagcccctatgat 70

                                                                       
Query: 347 tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 406
           ||||||||||||||||| ||||||||| || || ||||||||||| |||||||| |||||
Sbjct: 69  tcgaatacacatcaattctcgagctccgctgttatctgctacattcaaaagggtttgagg 10

                    
Query: 407 ttgaatcat 415
           |||||||||
Sbjct: 9   ttgaatcat 1

to top

>emb|AL731738.6|CNS08C7N Oryza sativa chromosome 12, . BAC OSJNBa0005K20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 143618

 Score =  365 bits (184), Expect = 1e-97
 Identities = 226/240 (94%)
 Strand = Plus / Minus

                                                                         
Query: 17    tttgatctaaatttcgcctactagtatttataatacttcaggagctaatgaaactatttt 76
             ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79037 tttgatctatatcttgtctactagtatttataatacttcaggagctaatgaaactatttt 78978

                                                                         
Query: 77    ggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgagttccttttgg 136
              ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 78977 agtaaaattcaattctctcaattcctcggcgatcgcgccaaaaacgcgagttccttttgg 78918

                                                                         
Query: 137   gttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtc 196
              || |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 78917 atttcctttttgatcaatgataaccgctgcattgtcgtcatagcgtattattataccgtc 78858

                                                                         
Query: 197   ttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttc 256
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78857 ttcgcatttgaactctttacatgtacgtacaattacagctcgaattacttcggatctttc 78798

to top

>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0059G01, complete sequence
          Length = 141661

 Score =  351 bits (177), Expect = 2e-93
 Identities = 195/201 (97%)
 Strand = Plus / Minus

                                                                         
Query: 158   aaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttaca 217
             |||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 23399 aaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttaca 23340

                                                                         
Query: 218   tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgc 277
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 23339 tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcactgc 23280

                                                                         
Query: 278   gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagc 337
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 23279 gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagc 23220

                                  
Query: 338   tcctatgactcgaatacacat 358
             |||||||||||||||||||||
Sbjct: 23219 tcctatgactcgaatacacat 23199



 Score =  174 bits (88), Expect = 2e-40
 Identities = 235/280 (83%), Gaps = 3/280 (1%)
 Strand = Plus / Plus

                                                                         
Query: 63    aatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaact 122
             ||||||| ||||||  || |||||||||||||||||||| |||| |||  ||||||||| 
Sbjct: 96297 aatgaaattattttaatacaattcaattctctcaattcc-cggcgatcatgccaaaaacg 96355

                                                                         
Query: 123   cgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcgg 182
              |||| || ||||| || | ||||||||| || |||||||  | ||  ||  ||||||| 
Sbjct: 96356 tgagtgccctttggatttcttttttgatcgatgataaccgttgtata-tcggcatagcgt 96414

                                                                         
Query: 183   attattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaatt 242
             |||||||||| || ||| |||||||| ||||||||||||| || ||||||  ||| ||||
Sbjct: 96415 attattatactgt-ttcacatttgaactctttacatgtacatataattacttctctaatt 96473

                                                                         
Query: 243   acttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaataaca 302
             |||| || ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||
Sbjct: 96474 actttgggtctttctagaggcatttggggcactgcatctttcattacagcaacaataaca 96533

                                                     
Query: 303   tcaccaatacgagcatatcgctgattaccagcagctccta 342
             ||| ||||| |||||||| | ||||||| |||||| ||||
Sbjct: 96534 tcatcaatatgagcatattgttgattactagcagcaccta 96573



 Score =  107 bits (54), Expect = 4e-20
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                         
Query: 385   ctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaa 444
             |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 96608 ctacatttaaaagggtttgaggttgaatcatattattttgatgtcaatttgttatttcaa 96667

               
Query: 445   tg 446
             ||
Sbjct: 96668 tg 96669

to top

>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16,
              complete sequence
          Length = 159525

 Score =  351 bits (177), Expect = 2e-93
 Identities = 195/201 (97%)
 Strand = Plus / Minus

                                                                          
Query: 158    aaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttaca 217
              |||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 130171 aaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttaca 130112

                                                                          
Query: 218    tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgc 277
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 130111 tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcactgc 130052

                                                                          
Query: 278    gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagc 337
              ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 130051 gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagc 129992

                                   
Query: 338    tcctatgactcgaatacacat 358
              |||||||||||||||||||||
Sbjct: 129991 tcctatgactcgaatacacat 129971

to top

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score =  349 bits (176), Expect = 6e-93
 Identities = 337/390 (86%), Gaps = 3/390 (0%)
 Strand = Plus / Plus

                                                                         
Query: 34    ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattcaattctc 93
             |||||||||||||||| |||||||| |||||||| |||||||| || ||||| || | ||
Sbjct: 81909 ctactagtatttataagacttcaggggctaatgagactattttagtgaaatttaactttc 81968

                                                                         
Query: 94    tcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaa 153
             ||||||||   |||||||| ||||||||||||||||||||||| || |||| ||||||||
Sbjct: 81969 tcaattcccgagcaatcgctccaaaaactcgagttccttttggatttccttcttgatcaa 82028

                                                                         
Query: 154   ttataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctt 213
             | | ||| || |||||||||||||| || ||||| |||||||  |||| ||||| |||||
Sbjct: 82029 tgacaactgccgcattgtcatcatatcgtattatcataccgttgtcgcgtttgagttctt 82088

                                                                         
Query: 214   tacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggca 273
             |||||||||||||||||||||||||||| ||||| |||||||| |||||||| | |||||
Sbjct: 82089 tacatgtacgtacaattacagctcgaataacttctgatctttcgagaggcatattgggca 82148

                                                                         
Query: 274   atgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccag 333
              ||| ||||||||||||||||||||||| ||||| ||| ||||||||||  ||||||   
Sbjct: 82149 ctgcttctttgattacagcaacaataacgtcaccgatatgagcatatcggcgattac--- 82205

                                                                         
Query: 334   cagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattta 393
              ||| ||||||| |||||| |||||||||| |||||| || || ||||| |||||||| |
Sbjct: 82206 tagcccctatgattcgaatgcacatcaattctcgagccccgctgttgtccgctacattca 82265

                                           
Query: 394   aaagggtctgaggttgaatcatattatttt 423
             || ||||||||||||||||||||| |||||
Sbjct: 82266 aatgggtctgaggttgaatcatatcatttt 82295

to top

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score =  323 bits (163), Expect = 4e-85
 Identities = 344/401 (85%), Gaps = 5/401 (1%)
 Strand = Plus / Plus

                                                                         
Query: 45    tataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcg 104
             ||||| ||||| || ||||||||||| ||||| ||||||||||| | || |||||| |||
Sbjct: 82583 tataagacttcgggtgctaatgaaacgattttagtaaaattcaactgtcgcaattc-tcg 82641

                                                                         
Query: 105   -gcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 163
              ||||| || ||||||| ||||||||||||||| || |||| ||||||||| ||||||||
Sbjct: 82642 agcaattgcaccaaaaattcgagttccttttggatttccttcttgatcaatgataaccgc 82701

                                                                         
Query: 164   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 223
              |||||||||||||| || ||||| || ||||  || | ||||| |||||||||||| ||
Sbjct: 82702 tgcattgtcatcatatcgtattatcatgccgttgtcacgtttgagttctttacatgtgcg 82761

                                                                         
Query: 224   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 283
             |||||| ||||||| ||||| ||| ||||||||||||||||| | ||||| ||| |||||
Sbjct: 82762 tacaatcacagctctaattatttctgatctttctagaggcatgttgggcactgcttcttt 82821

                                                                         
Query: 284   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 343
             ||||||||||||||||||||| |||| | |||||||||| |||||||   ||| ||||||
Sbjct: 82822 gattacagcaacaataacatcgccaagatgagcatatcggtgattac---cagttcctat 82878

                                                                         
Query: 344   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 403
             || |||||||||||| |||||| |||||||||| || || |||||||| |||||||||||
Sbjct: 82879 gattcgaatacacattaatttttgagctccactgttatccgctacattcaaaagggtctg 82938

                                                      
Query: 404   aggttgaatcatattattttgatttcaatttgttatttcaa 444
             |||||||||||||| ||||| | || ||| | |||||||||
Sbjct: 82939 aggttgaatcatatcatttttaatttaatctcttatttcaa 82979

to top

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score =  319 bits (161), Expect = 6e-84
 Identities = 328/383 (85%), Gaps = 3/383 (0%)
 Strand = Plus / Plus

                                                                         
Query: 41    tatttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattc 100
             |||||||||||| ||||||||||  ||||||||||| || |||||||| | |||||||||
Sbjct: 80435 tatttataatacctcaggagctagggaaactattttagtgaaattcaaatgtctcaattc 80494

                                                                         
Query: 101   ctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataac 160
             |   || ||||| ||||||||||||||||||||||| || |||| ||||||||| | |||
Sbjct: 80495 ccgagcgatcgcaccaaaaactcgagttccttttggattcccttcttgatcaatgacaac 80554

                                                                         
Query: 161   cgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgt 220
              || |||||||||||||| || ||||| |||||||  || | ||||| ||||||||||||
Sbjct: 80555 tgctgcattgtcatcatatcgtattatcataccgttgtcacgtttgagttctttacatgt 80614

                                                                         
Query: 221   acgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtc 280
             |||||||||||||||||  |  ||||| ||||||||||||| ||| | ||| | ||| ||
Sbjct: 80615 acgtacaattacagctctgaccacttctgatctttctagagacatattgggtactgcttc 80674

                                                                         
Query: 281   tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 340
             ||||||||||||||||||||| ||||||||| ||||||||||  ||||||     |||||
Sbjct: 80675 tttgattacagcaacaataacgtcaccaatatgagcatatcggcgattac---tggctcc 80731

                                                                         
Query: 341   tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 400
             ||||| ||||||||||||||||| |||||| || || || || |||||||||||||||||
Sbjct: 80732 tatgattcgaatacacatcaattctcgagccccgctgttatccgctacatttaaaagggt 80791

                                    
Query: 401   ctgaggttgaatcatattatttt 423
             ||||||||||||||||| |||||
Sbjct: 80792 ctgaggttgaatcatatcatttt 80814

to top

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score =  307 bits (155), Expect = 2e-80
 Identities = 319/373 (85%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 102
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 82356 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 82415

                                                                         
Query: 103   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 162
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 82416 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 82475

                                                                         
Query: 163   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 222
             |||||||||||||||| |||||||| || ||||  || | ||||| ||||||||| ||||
Sbjct: 82476 cagcattgtcatcatatcggattatcatcccgttgtcacgtttgagttctttacaggtac 82535

                                                                         
Query: 223   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 282
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| ||||
Sbjct: 82536 gcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttctt 82595

                                                                         
Query: 283   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 342
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 82596 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 82652

                                                                         
Query: 343   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 402
             ||| ||||||||||||||||| |||||| || ||||| || |||||||||||| ||||||
Sbjct: 82653 tgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtct 82712

                          
Query: 403   gaggttgaatcat 415
             |||||||||||||
Sbjct: 82713 gaggttgaatcat 82725

to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  305 bits (154), Expect = 8e-80
 Identities = 184/194 (94%)
 Strand = Plus / Minus

                                                                            
Query: 295      caataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatac 354
                |||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 24916826 caattacatcaccaatacgagcatatcgctgattactagcagctcctatgacttgaatac 24916767

                                                                            
Query: 355      acatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatca 414
                |||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||| |
Sbjct: 24916766 acattaattttcgagctccactattatctgctacatttaaaagggtctgaggttaaatta 24916707

                                                                            
Query: 415      tattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttc 474
                ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 24916706 tattattttgatttcaatttgctatttcaatgcaaaaagatgaaagaaatattgtctttc 24916647

                              
Query: 475      cagaaagaaaaacc 488
                ||||||||| ||||
Sbjct: 24916646 cagaaagaagaacc 24916633



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                            
Query: 98       ttcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattat 157
                ||||||||| |||| ||||||||| |||||||||||||| || | ||||||| |||| ||
Sbjct: 20875041 ttcctcggcgatcgtgccaaaaacgcgagttccttttggatttcttttttgaccaatgat 20875100

                                  
Query: 158      aaccgcagcattgtcatc 175
                |||||  |||||||||||
Sbjct: 20875101 aaccgttgcattgtcatc 20875118



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                    
Query: 525      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 24916596 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 24916545



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                           
Query: 79       taaaattcaattctctcaattcctcggcaatcgcgccaaaaac 121
                ||||||||||| ||||| |||||||||| ||||||||||||||
Sbjct: 32000475 taaaattcaatactctcgattcctcggcgatcgcgccaaaaac 32000433

to top

>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1215B07
          Length = 165957

 Score =  305 bits (154), Expect = 8e-80
 Identities = 184/194 (94%)
 Strand = Plus / Minus

                                                                         
Query: 295   caataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatac 354
             |||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 78109 caattacatcaccaatacgagcatatcgctgattactagcagctcctatgacttgaatac 78050

                                                                         
Query: 355   acatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatca 414
             |||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||| |
Sbjct: 78049 acattaattttcgagctccactattatctgctacatttaaaagggtctgaggttaaatta 77990

                                                                         
Query: 415   tattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttc 474
             ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 77989 tattattttgatttcaatttgctatttcaatgcaaaaagatgaaagaaatattgtctttc 77930

                           
Query: 475   cagaaagaaaaacc 488
             ||||||||| ||||
Sbjct: 77929 cagaaagaagaacc 77916



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 77879 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 77828

to top

>gb|DQ069421.1| Acorus americanus ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score =  299 bits (151), Expect = 5e-78
 Identities = 315/369 (85%), Gaps = 3/369 (0%)
 Strand = Plus / Minus

                                                                       
Query: 47  taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 106
           |||||| ||||||||||  ||||||||||| || |||||||| | ||||||||||   ||
Sbjct: 366 taatacctcaggagctagggaaactattttagtgaaattcaaatgtctcaattcccgagc 307

                                                                       
Query: 107 aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 166
            ||||| ||||||||||||||||||||||| || |||| ||||||||| | ||| || ||
Sbjct: 306 gatcgcaccaaaaactcgagttccttttggattcccttcttgatcaatgacaactgctgc 247

                                                                       
Query: 167 attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 226
           |||||||||||| || ||||| |||||||  || | ||||| ||||||||||||||||||
Sbjct: 246 attgtcatcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtac 187

                                                                       
Query: 227 aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 286
           |||||||||||  |  ||||| ||||||||||||| ||| | ||| | ||| ||||||||
Sbjct: 186 aattacagctctgaccacttctgatctttctagagacatattgggtactgcttctttgat 127

                                                                       
Query: 287 tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 346
           ||||||||||||||| ||||||||| ||||||||||  ||||||     |||||||||| 
Sbjct: 126 tacagcaacaataacgtcaccaatatgagcatatcggcgattac---tggctcctatgat 70

                                                                       
Query: 347 tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 406
           ||||||||||||||||| |||||| || || || || |||||||||||||||||||||||
Sbjct: 69  tcgaatacacatcaattctcgagccccgctgttatccgctacatttaaaagggtctgagg 10

                    
Query: 407 ttgaatcat 415
           |||||||||
Sbjct: 9   ttgaatcat 1

to top

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score =  299 bits (151), Expect = 5e-78
 Identities = 324/381 (85%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 102
             |||||||||| || |||||||||||||||||||| |||||||| || | |||||||||  
Sbjct: 80082 tttataatacctcgggagctaatgaaactattttagtaaaattgaactgtctcaattctc 80141

                                                                         
Query: 103   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 162
              ||||||||| |||||||| |||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 80142 gggcaatcgcaccaaaaacgcgagttccttttggatttccttcttgatcaatcacaactg 80201

                                                                         
Query: 163   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 222
             |||||||||||||||| || ||||| |||||||  || | ||| | ||||||||| ||||
Sbjct: 80202 cagcattgtcatcatatcgtattatcataccgttgtcacgtttaagttctttacaagtac 80261

                                                                         
Query: 223   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 282
             | |||||||||||||  |  ||||| ||||||||||||||||| |  || | ||||||||
Sbjct: 80262 ggacaattacagctctgaccacttctgatctttctagaggcatgtttggaactgcgtctt 80321

                                                                         
Query: 283   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 342
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 80322 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 80378

                                                                         
Query: 343   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 402
             ||| ||||||||||||||||| |||||| || || || ||||||||||| ||| ||||||
Sbjct: 80379 tgattcgaatacacatcaattctcgagccccgctgttatctgctacattcaaatgggtct 80438

                                  
Query: 403   gaggttgaatcatattatttt 423
             ||||||||||||||| |||||
Sbjct: 80439 gaggttgaatcatatcatttt 80459

to top

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score =  299 bits (151), Expect = 5e-78
 Identities = 318/373 (85%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 102
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 82305 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 82364

                                                                         
Query: 103   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 162
              ||| || || ||||||| ||||||||| ||||| || |||| ||||||||| | ||| |
Sbjct: 82365 gggcgattgcaccaaaaattcgagttccctttggatttccttcttgatcaataacaactg 82424

                                                                         
Query: 163   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 222
             |||||||||||||||| |||||||| || ||||  || | ||||| ||||||||| ||||
Sbjct: 82425 cagcattgtcatcatatcggattatcatcccgttgtcacgtttgagttctttacaggtac 82484

                                                                         
Query: 223   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 282
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| ||||
Sbjct: 82485 gcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttctt 82544

                                                                         
Query: 283   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 342
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 82545 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 82601

                                                                         
Query: 343   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 402
             ||| ||||||||||||||||| |||||| || ||||| || |||||||||||| ||||||
Sbjct: 82602 tgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtct 82661

                          
Query: 403   gaggttgaatcat 415
             |||||||||||||
Sbjct: 82662 gaggttgaatcat 82674

to top

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score =  299 bits (151), Expect = 5e-78
 Identities = 318/373 (85%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 102
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 82317 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 82376

                                                                         
Query: 103   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 162
              ||| || || ||||||| ||||||||| ||||| || |||| ||||||||| | ||| |
Sbjct: 82377 gggcgattgcaccaaaaattcgagttccctttggatttccttcttgatcaataacaactg 82436

                                                                         
Query: 163   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 222
             |||||||||||||||| |||||||| || ||||  || | ||||| ||||||||| ||||
Sbjct: 82437 cagcattgtcatcatatcggattatcatcccgttgtcacgtttgagttctttacaggtac 82496

                                                                         
Query: 223   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 282
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| ||||
Sbjct: 82497 gcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttctt 82556

                                                                         
Query: 283   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 342
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 82557 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 82613

                                                                         
Query: 343   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 402
             ||| ||||||||||||||||| |||||| || ||||| || |||||||||||| ||||||
Sbjct: 82614 tgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtct 82673

                          
Query: 403   gaggttgaatcat 415
             |||||||||||||
Sbjct: 82674 gaggttgaatcat 82686

to top

>gb|DQ069423.1| Nuphar advena ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score =  291 bits (147), Expect = 1e-75
 Identities = 314/369 (85%), Gaps = 3/369 (0%)
 Strand = Plus / Minus

                                                                       
Query: 47  taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 106
           ||||||||| ||||||||||| ||||| || || ||||| || | |||||||||    ||
Sbjct: 366 taatacttcgggagctaatgagactatcttagtgaaatttaactgtctcaattcacgagc 307

                                                                       
Query: 107 aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 166
           |||||  |||||||||||||| |||||||| || |||| ||||||||| | ||| || ||
Sbjct: 306 aatcgaaccaaaaactcgagtgccttttggatttccttcttgatcaatgacaactgctgc 247

                                                                       
Query: 167 attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 226
           |||||||||||| || ||||| |||||||  |||| ||||| ||||||||||||||||||
Sbjct: 246 attgtcatcataccgtattatcataccgttgtcgcgtttgagttctttacatgtacgtac 187

                                                                       
Query: 227 aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 286
           |||||||||||  |||||||| |||||||| || ||||| |  |||| ||| ||||||||
Sbjct: 186 aattacagctctgattacttctgatctttccaggggcatatttggcactgcttctttgat 127

                                                                       
Query: 287 tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 346
           ||||||||||||||| ||||| ||| |||||||||| | |||||    ||||||||||| 
Sbjct: 126 tacagcaacaataacgtcaccgatatgagcatatcggtaattac---tagctcctatgat 70

                                                                       
Query: 347 tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 406
           |||||||||||||| |||||||||||| || ||||| |||||||| ||| ||||||||||
Sbjct: 69  tcgaatacacatcagttttcgagctccgctgttgtccgctacattcaaatgggtctgagg 10

                    
Query: 407 ttgaatcat 415
           |||||||||
Sbjct: 9   ttgaatcat 1

to top

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  291 bits (147), Expect = 1e-75
 Identities = 323/381 (84%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 102
             |||||||||| || |||||||||||||||||||| |||||||| || | |||||||||| 
Sbjct: 82667 tttataatacctccggagctaatgaaactattttagtaaaatttaactgtctcaattccc 82726

                                                                         
Query: 103   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 162
              |||||| || |||||||| |||||||| |||||||| |||| |||||| || | |||||
Sbjct: 82727 gggcaattgcaccaaaaacccgagttccctttgggtttccttcttgatcgatgacaaccg 82786

                                                                         
Query: 163   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 222
             |||||||||||||||| || ||||| |||||||  || | ||||| ||||||||| ||||
Sbjct: 82787 cagcattgtcatcatatcgtattatcataccgttatcacgtttgagttctttacaagtac 82846

                                                                         
Query: 223   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 282
             |||||||||||||||  |  ||||| |||||| |||| ||||| |  |||| ||| ||||
Sbjct: 82847 gtacaattacagctctgaccacttctgatcttgctaggggcatgtttggcactgcttctt 82906

                                                                         
Query: 283   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 342
             |||| |||||||||||||| ||||| ||| ||||||||||  |||| |    ||||||||
Sbjct: 82907 tgatcacagcaacaataacgtcaccgatatgagcatatcgacgattgc---tagctccta 82963

                                                                         
Query: 343   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 402
             ||| ||||||||||||||||| |||||| || || || || |||||||| ||||||||||
Sbjct: 82964 tgattcgaatacacatcaattctcgagccccgctgttatccgctacattcaaaagggtct 83023

                                  
Query: 403   gaggttgaatcatattatttt 423
             ||||||||||||||| |||||
Sbjct: 83024 gaggttgaatcatatcatttt 83044

to top

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score =  291 bits (147), Expect = 1e-75
 Identities = 317/373 (84%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 102
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 82452 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 82511

                                                                         
Query: 103   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 162
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 82512 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 82571

                                                                         
Query: 163   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 222
             ||||||||||||| || || ||||| || ||||  || | ||||| ||||||||| ||||
Sbjct: 82572 cagcattgtcatcgtatcgtattatcatcccgttgtcacgtttgagttctttacaggtac 82631

                                                                         
Query: 223   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 282
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| ||||
Sbjct: 82632 gcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttctt 82691

                                                                         
Query: 283   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 342
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 82692 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 82748

                                                                         
Query: 343   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 402
             ||| ||||||||||||||||| |||||| || ||||| || |||||||||||| ||||||
Sbjct: 82749 tgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtct 82808

                          
Query: 403   gaggttgaatcat 415
             |||||||||||||
Sbjct: 82809 gaggttgaatcat 82821

to top

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score =  291 bits (147), Expect = 1e-75
 Identities = 317/373 (84%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 102
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 82449 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 82508

                                                                         
Query: 103   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 162
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 82509 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 82568

                                                                         
Query: 163   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 222
             ||||||||||||| || || ||||| || ||||  || | ||||| ||||||||| ||||
Sbjct: 82569 cagcattgtcatcgtatcgtattatcatcccgttgtcacgtttgagttctttacaggtac 82628

                                                                         
Query: 223   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 282
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| ||||
Sbjct: 82629 gcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttctt 82688

                                                                         
Query: 283   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 342
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 82689 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 82745

                                                                         
Query: 343   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 402
             ||| ||||||||||||||||| |||||| || ||||| || |||||||||||| ||||||
Sbjct: 82746 tgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtct 82805

                          
Query: 403   gaggttgaatcat 415
             |||||||||||||
Sbjct: 82806 gaggttgaatcat 82818

to top

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score =  289 bits (146), Expect = 5e-75
 Identities = 322/380 (84%), Gaps = 3/380 (0%)
 Strand = Plus / Plus

                                                                         
Query: 44    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 103
             ||||||||| ||||| ||||| ||||||||||| |||||||| || | ||||||||||  
Sbjct: 85542 ttataatacctcaggggctaaggaaactattttagtaaaatttaactgtctcaattcccg 85601

                                                                         
Query: 104   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 163
             | | ||||| ||||||| |||||||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 85602 gacgatcgcaccaaaaattcgagttccttttgggtttccttcttgatcaataataactgc 85661

                                                                         
Query: 164   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 223
             ||||||||||||||| || ||||| |||||||  || | ||||| ||||||||| |||||
Sbjct: 85662 agcattgtcatcatatcgtattatcataccgttgtcacgtttgagttctttacaggtacg 85721

                                                                         
Query: 224   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 283
             ||||||||||||||  |||||||| ||||||||||||||||| |  || | | | |||||
Sbjct: 85722 tacaattacagctctgattacttctgatctttctagaggcatatttggtactacttcttt 85781

                                                                         
Query: 284   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 343
             ||| |||||||||||||| ||||||||| |||| |||||  ||||||    || ||||||
Sbjct: 85782 gatcacagcaacaataacgtcaccaatatgagcgtatcggcgattac---tagttcctat 85838

                                                                         
Query: 344   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 403
             || ||||||||||||||||| ||| || || || ||||| |||||||| ||| |||||||
Sbjct: 85839 gattcgaatacacatcaattctcgggccccgctgttgtccgctacattcaaatgggtctg 85898

                                 
Query: 404   aggttgaatcatattatttt 423
              ||||||||||||| |||||
Sbjct: 85899 gggttgaatcatatcatttt 85918

to top

>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome
          Length = 152772

 Score =  287 bits (145), Expect = 2e-74
 Identities = 321/379 (84%), Gaps = 3/379 (0%)
 Strand = Plus / Plus

                                                                         
Query: 45    tataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcg 104
             |||||||| ||||| ||||||||||||||||| |||||||| || | |||||||||   |
Sbjct: 80638 tataatacctcaggggctaatgaaactattttagtaaaattgaactgtctcaattctcgg 80697

                                                                         
Query: 105   gcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgca 164
             |||||||| ||||||||||| ||||||||||| || |||| ||||||||| | ||| || 
Sbjct: 80698 gcaatcgcaccaaaaactcgcgttccttttggatttccttcttgatcaatcacaactgcg 80757

                                                                         
Query: 165   gcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgt 224
             |||||||||||||| || ||||| |||||||  || | ||| | ||||||||| ||||| 
Sbjct: 80758 gcattgtcatcatatcgtattatcataccgttgtcacgtttaagttctttacaagtacgg 80817

                                                                         
Query: 225   acaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttg 284
             |||||||||||||  |  ||||| ||||||||||||||||| |  || | ||||||||||
Sbjct: 80818 acaattacagctctgaccacttctgatctttctagaggcatgtttggaactgcgtctttg 80877

                                                                         
Query: 285   attacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatg 344
             || |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||||
Sbjct: 80878 atcacagcaacaataacgtcaccaatatgagcatatcggcgattgc---tagctcctatg 80934

                                                                         
Query: 345   actcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctga 404
             | ||||||||||||||||| |||||| || || || ||||||||||| ||| ||||||||
Sbjct: 80935 attcgaatacacatcaattctcgagccccgctgttatctgctacattcaaatgggtctga 80994

                                
Query: 405   ggttgaatcatattatttt 423
             ||||||||||||| |||||
Sbjct: 80995 ggttgaatcatatcatttt 81013

to top

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score =  287 bits (145), Expect = 2e-74
 Identities = 318/375 (84%), Gaps = 3/375 (0%)
 Strand = Plus / Plus

                                                                         
Query: 41    tatttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattc 100
             ||||||||||||||| ||||||||||| ||||| || || ||||| || | |||||||||
Sbjct: 86608 tatttataatacttcgggagctaatgagactatcttagtgaaatttaactgtctcaattc 86667

                                                                         
Query: 101   ctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataac 160
                 |||||||  ||||||||||| || |||||||| || |||| ||||||||| | |||
Sbjct: 86668 acgagcaatcgaaccaaaaactcgggtgccttttggatttccttcttgatcaatgacaac 86727

                                                                         
Query: 161   cgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgt 220
              || |||||||||||||| |||||||| |||||||  ||||  |||| ||||||||||||
Sbjct: 86728 tgctgcattgtcatcataccggattatcataccgttgtcgcgcttgagttctttacatgt 86787

                                                                         
Query: 221   acgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtc 280
             |||||||||||||||||  |||||||| |||||||| || ||||| |  |||| ||| ||
Sbjct: 86788 acgtacaattacagctctgattacttctgatctttccaggggcatatttggcactgcttc 86847

                                                                         
Query: 281   tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 340
             ||||||||||||||||||||| ||||| ||| |||||||||| | |||||    ||||||
Sbjct: 86848 tttgattacagcaacaataacgtcaccgatatgagcatatcggtaattac---tagctcc 86904

                                                                         
Query: 341   tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 400
             ||||| |||||||||||| | |||||| ||||| || ||||| |||||||| ||||||||
Sbjct: 86905 tatgattcgaatacacataagttttcgggctccgctgttgtccgctacattcaaaagggt 86964

                            
Query: 401   ctgaggttgaatcat 415
             |||||||||||||||
Sbjct: 86965 ctgaggttgaatcat 86979

to top

>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome
          Length = 152765

 Score =  287 bits (145), Expect = 2e-74
 Identities = 321/379 (84%), Gaps = 3/379 (0%)
 Strand = Plus / Plus

                                                                         
Query: 45    tataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcg 104
             |||||||| ||||| ||||||||||||||||| |||||||| || | |||||||||   |
Sbjct: 80636 tataatacctcaggggctaatgaaactattttagtaaaattgaactgtctcaattctcgg 80695

                                                                         
Query: 105   gcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgca 164
             |||||||| ||||||||||| ||||||||||| || |||| ||||||||| | ||| || 
Sbjct: 80696 gcaatcgcaccaaaaactcgcgttccttttggatttccttcttgatcaatcacaactgcg 80755

                                                                         
Query: 165   gcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgt 224
             |||||||||||||| || ||||| |||||||  || | ||| | ||||||||| ||||| 
Sbjct: 80756 gcattgtcatcatatcgtattatcataccgttgtcacgtttaagttctttacaagtacgg 80815

                                                                         
Query: 225   acaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttg 284
             |||||||||||||  |  ||||| ||||||||||||||||| |  || | ||||||||||
Sbjct: 80816 acaattacagctctgaccacttctgatctttctagaggcatgtttggaactgcgtctttg 80875

                                                                         
Query: 285   attacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatg 344
             || |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||||
Sbjct: 80876 atcacagcaacaataacgtcaccaatatgagcatatcggcgattgc---tagctcctatg 80932

                                                                         
Query: 345   actcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctga 404
             | ||||||||||||||||| |||||| || || || ||||||||||| ||| ||||||||
Sbjct: 80933 attcgaatacacatcaattctcgagccccgctgttatctgctacattcaaatgggtctga 80992

                                
Query: 405   ggttgaatcatattatttt 423
             ||||||||||||| |||||
Sbjct: 80993 ggttgaatcatatcatttt 81011

to top

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score =  285 bits (144), Expect = 8e-74
 Identities = 323/382 (84%), Gaps = 3/382 (0%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 102
             |||||||||||||||| |||||||||| |||||| || ||||| || | |||||||||  
Sbjct: 82960 tttataatacttcaggtgctaatgaaattatttttgtgaaatttaactgtctcaattctc 83019

                                                                         
Query: 103   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 162
              ||||||||| ||||||| ||||||||||||||| || |||| ||||||||| | |||||
Sbjct: 83020 gggcaatcgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaaccg 83079

                                                                         
Query: 163   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 222
             |||||||||||||||| || ||||| ||||| | ||| | ||||| ||||||||| ||||
Sbjct: 83080 cagcattgtcatcatatcgtattatcataccattttctcgtttgagttctttacaagtac 83139

                                                                         
Query: 223   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 282
             |||||||||||||||  || ||||| |||||||||| |||  | |  || |  || |  |
Sbjct: 83140 gtacaattacagctctgatcacttctgatctttctaaaggtgtatttgggacggctttct 83199

                                                                         
Query: 283   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 342
             ||||||||||||||||||| ||||||||| ||||||||||  ||||||    ||| ||||
Sbjct: 83200 tgattacagcaacaataacgtcaccaatatgagcatatcgtcgattac---tagccccta 83256

                                                                         
Query: 343   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 402
             ||| ||||||||||||||||| ||| ||||| || || ||||||||||| |||||||| |
Sbjct: 83257 tgattcgaatacacatcaattctcgggctccgctgttatctgctacattcaaaagggttt 83316

                                   
Query: 403   gaggttgaatcatattattttg 424
             ||||||||||||||||||||||
Sbjct: 83317 gaggttgaatcatattattttg 83338

to top

>gb|AF441853.1|AF441853 Cucumis sativus RBL1 mRNA, complete cds; chloroplast gene for
           chloroplast product
          Length = 703

 Score =  285 bits (144), Expect = 8e-74
 Identities = 323/382 (84%), Gaps = 3/382 (0%)
 Strand = Plus / Minus

                                                                       
Query: 43  tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 102
           |||||||||||||||| |||||||||| |||||| || ||||| || | |||||||||  
Sbjct: 436 tttataatacttcaggtgctaatgaaattatttttgtgaaatttaactgtctcaattctc 377

                                                                       
Query: 103 cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 162
            ||||||||| ||||||| ||||||||||||||| || |||| ||||||||| | |||||
Sbjct: 376 gggcaatcgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaaccg 317

                                                                       
Query: 163 cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 222
           |||||||||||||||| || ||||| ||||| | ||| | ||||| ||||||||| ||||
Sbjct: 316 cagcattgtcatcatatcgtattatcataccattttctcgtttgagttctttacaagtac 257

                                                                       
Query: 223 gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 282
           |||||||||||||||  || ||||| |||||||||| |||  | |  || |  || |  |
Sbjct: 256 gtacaattacagctctgatcacttctgatctttctaaaggtgtatttgggacggctttct 197

                                                                       
Query: 283 tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 342
           ||||||||||||||||||| ||||||||| ||||||||||  ||||||    ||| ||||
Sbjct: 196 tgattacagcaacaataacgtcaccaatatgagcatatcgtcgattac---tagccccta 140

                                                                       
Query: 343 tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 402
           ||| ||||||||||||||||| ||| ||||| || || ||||||||||| |||||||| |
Sbjct: 139 tgattcgaatacacatcaattctcgggctccgctgttatctgctacattcaaaagggttt 80

                                 
Query: 403 gaggttgaatcatattattttg 424
           ||||||||||||||||||||||
Sbjct: 79  gaggttgaatcatattattttg 58

to top

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score =  285 bits (144), Expect = 8e-74
 Identities = 323/382 (84%), Gaps = 3/382 (0%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 102
             |||||||||||||||| |||||||||| |||||| || ||||| || | |||||||||  
Sbjct: 83188 tttataatacttcaggtgctaatgaaattatttttgtgaaatttaactgtctcaattctc 83247

                                                                         
Query: 103   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 162
              ||||||||| ||||||| ||||||||||||||| || |||| ||||||||| | |||||
Sbjct: 83248 gggcaatcgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaaccg 83307

                                                                         
Query: 163   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 222
             |||||||||||||||| || ||||| ||||| | ||| | ||||| ||||||||| ||||
Sbjct: 83308 cagcattgtcatcatatcgtattatcataccattttctcgtttgagttctttacaagtac 83367

                                                                         
Query: 223   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 282
             |||||||||||||||  || ||||| |||||||||| |||  | |  || |  || |  |
Sbjct: 83368 gtacaattacagctctgatcacttctgatctttctaaaggtgtatttgggacggctttct 83427

                                                                         
Query: 283   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 342
             ||||||||||||||||||| ||||||||| ||||||||||  ||||||    ||| ||||
Sbjct: 83428 tgattacagcaacaataacgtcaccaatatgagcatatcgtcgattac---tagccccta 83484

                                                                         
Query: 343   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 402
             ||| ||||||||||||||||| ||| ||||| || || ||||||||||| |||||||| |
Sbjct: 83485 tgattcgaatacacatcaattctcgggctccgctgttatctgctacattcaaaagggttt 83544

                                   
Query: 403   gaggttgaatcatattattttg 424
             ||||||||||||||||||||||
Sbjct: 83545 gaggttgaatcatattattttg 83566

to top

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score =  283 bits (143), Expect = 3e-73
 Identities = 316/373 (84%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 102
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 82940 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 82999

                                                                         
Query: 103   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 162
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 83000 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 83059

                                                                         
Query: 163   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 222
             |||||||||||||||| || |||||||| ||||  || | ||||| ||||||||| || |
Sbjct: 83060 cagcattgtcatcatatcgtattattatcccgttgtcacgtttgagttctttacaggtcc 83119

                                                                         
Query: 223   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 282
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || |  || ||||
Sbjct: 83120 gcacaattacagctctgactacttctgatctttctaggggcatatttggtatggcttctt 83179

                                                                         
Query: 283   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 342
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 83180 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 83236

                                                                         
Query: 343   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 402
             ||| ||||||||||||||||| |||||| || || || || |||||||||||| ||||||
Sbjct: 83237 tgattcgaatacacatcaattctcgagccccgctgttatccgctacatttaaatgggtct 83296

                          
Query: 403   gaggttgaatcat 415
             |||||||||||||
Sbjct: 83297 gaggttgaatcat 83309

to top

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score =  276 bits (139), Expect = 8e-71
 Identities = 315/373 (84%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 102
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 83177 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 83236

                                                                         
Query: 103   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 162
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 83237 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 83296

                                                                         
Query: 163   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 222
             |||||||||||||||| || ||||| || ||||  || | ||||| ||||||||| || |
Sbjct: 83297 cagcattgtcatcatatcgtattatcatcccgttgtcacgtttgagttctttacaggtcc 83356

                                                                         
Query: 223   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 282
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || |  || ||||
Sbjct: 83357 gcacaattacagctctgactacttctgatctttctaggggcatatttggtacggcttctt 83416

                                                                         
Query: 283   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 342
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 83417 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 83473

                                                                         
Query: 343   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 402
             ||| ||||||||||||||||| |||||| || || || || |||||||||||| ||||||
Sbjct: 83474 tgattcgaatacacatcaattctcgagccccgctgttatccgctacatttaaatgggtct 83533

                          
Query: 403   gaggttgaatcat 415
             |||||||||||||
Sbjct: 83534 gaggttgaatcat 83546

to top

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score =  276 bits (139), Expect = 8e-71
 Identities = 317/375 (84%), Gaps = 6/375 (1%)
 Strand = Plus / Plus

                                                                         
Query: 44    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 103
             ||||||||| ||||||||||||||||||||||| | ||| ||   || || |||||||  
Sbjct: 79239 ttataatacctcaggagctaatgaaactattttcgcaaattt---ttgtcgcaattcccg 79295

                                                                         
Query: 104   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 163
             |||||| || ||||||| ||||||||||||||| || |||| ||||||||| ||||| ||
Sbjct: 79296 ggcaattgcaccaaaaattcgagttccttttggatttccttcttgatcaatgataactgc 79355

                                                                         
Query: 164   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 223
             ||||||||||||||| || ||||| |||||||  |||| ||| | ||||||||| |||||
Sbjct: 79356 agcattgtcatcatatcgtattatcataccgttgtcgcgttttagttctttacaagtacg 79415

                                                                         
Query: 224   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 283
             ||||| ||||||||  || ||||| ||||||||||  ||| | | ||| | ||| |||||
Sbjct: 79416 tacaactacagctctgatcacttctgatctttctaagggcgtgttggggattgcttcttt 79475

                                                                         
Query: 284   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 343
             ||| |||||||||||||| ||||||||||||||||||||  | || |    |||||||||
Sbjct: 79476 gatcacagcaacaataacgtcaccaatacgagcatatcgacggttgc---tagctcctat 79532

                                                                         
Query: 344   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 403
             || ||||||||||||||||| |||||| || || |||||||||||||| ||| |||||||
Sbjct: 79533 gattcgaatacacatcaattctcgagccccgctgttgtctgctacattcaaatgggtctg 79592

                            
Query: 404   aggttgaatcatatt 418
             |||||||||||||||
Sbjct: 79593 aggttgaatcatatt 79607

to top

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  276 bits (139), Expect = 8e-71
 Identities = 315/373 (84%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 102
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 83420 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 83479

                                                                         
Query: 103   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 162
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 83480 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 83539

                                                                         
Query: 163   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 222
             |||||||||||||||| || ||||| || ||||  || | ||||| ||||||||| ||||
Sbjct: 83540 cagcattgtcatcatatcgtattatcatcccgttgtcacgtttgagttctttacaggtac 83599

                                                                         
Query: 223   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 282
             | |||||||||||||  | || ||| ||||||||||| ||||| |  || | ||| ||||
Sbjct: 83600 gcacaattacagctctgactatttctgatctttctaggggcatatttggtactgcttctt 83659

                                                                         
Query: 283   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 342
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 83660 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 83716

                                                                         
Query: 343   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 402
             ||| |||||||||||| |||| |||||| || || || || |||||||||||| ||||||
Sbjct: 83717 tgattcgaatacacattaattctcgagccccgctgttatccgctacatttaaatgggtct 83776

                          
Query: 403   gaggttgaatcat 415
             |||||||||||||
Sbjct: 83777 gaggttgaatcat 83789

to top

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score =  276 bits (139), Expect = 8e-71
 Identities = 315/373 (84%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 102
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 83175 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 83234

                                                                         
Query: 103   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 162
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 83235 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 83294

                                                                         
Query: 163   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 222
             |||||||||||||||| || ||||| || ||||  || | ||||| ||||||||| || |
Sbjct: 83295 cagcattgtcatcatatcgtattatcatcccgttgtcacgtttgagttctttacaggtcc 83354

                                                                         
Query: 223   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 282
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || |  || ||||
Sbjct: 83355 gcacaattacagctctgactacttctgatctttctaggggcatatttggtacggcttctt 83414

                                                                         
Query: 283   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 342
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 83415 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 83471

                                                                         
Query: 343   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 402
             ||| ||||||||||||||||| |||||| || || || || |||||||||||| ||||||
Sbjct: 83472 tgattcgaatacacatcaattctcgagccccgctgttatccgctacatttaaatgggtct 83531

                          
Query: 403   gaggttgaatcat 415
             |||||||||||||
Sbjct: 83532 gaggttgaatcat 83544

to top

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score =  274 bits (138), Expect = 3e-70
 Identities = 314/372 (84%), Gaps = 3/372 (0%)
 Strand = Plus / Plus

                                                                         
Query: 44    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 103
             ||||||||| || |||||||||||||||||||| || ||||| || | ||||||||||  
Sbjct: 85087 ttataatacctcgggagctaatgaaactattttagtgaaatttaactgtctcaattcccg 85146

                                                                         
Query: 104   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 163
             ||| ||||| ||||||| ||||||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 85147 ggcgatcgcaccaaaaattcgagttccttttggatttccttcttgatcaatgacaacggc 85206

                                                                         
Query: 164   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 223
             ||||||||||||||| || ||||| || ||||  |||| ||||| ||||||||  |||||
Sbjct: 85207 agcattgtcatcatatcgtattatcatcccgttgtcgcgtttgagttctttacgagtacg 85266

                                                                         
Query: 224   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 283
             ||||||||||||||  || ||||| ||||||||||||||  | |  || | ||| || ||
Sbjct: 85267 tacaattacagctctgatcacttctgatctttctagaggtgtatttggtactgcttcctt 85326

                                                                         
Query: 284   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 343
             ||| |||||||||||||| ||||||||| ||||||||||  ||||||    |||||||||
Sbjct: 85327 gatcacagcaacaataacgtcaccaatatgagcatatcggcgattac---tagctcctat 85383

                                                                         
Query: 344   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 403
             |||||||||||||||||||| ||| || || || || ||||||||||| ||| |||||||
Sbjct: 85384 gactcgaatacacatcaattctcgggccccgctgttatctgctacattcaaatgggtctg 85443

                         
Query: 404   aggttgaatcat 415
             ||||||||||||
Sbjct: 85444 aggttgaatcat 85455

to top

>emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19, rpl14, rpl16 and rpl22
            for ribosomal proteins S3, S19, L14, L16 and L22
          Length = 4102

 Score =  254 bits (128), Expect = 3e-64
 Identities = 317/378 (83%), Gaps = 9/378 (2%)
 Strand = Plus / Minus

                                                                        
Query: 44   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 103
            ||||||||| ||||||||||||||||||||||| | ||| ||   || || |||||||  
Sbjct: 3697 ttataatacctcaggagctaatgaaactattttcgcaaattt---ttgtcgcaattcccg 3641

                                                                        
Query: 104  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc-- 161
            |||||| || ||||||| ||||||||||||||| || |||| ||||||||| |||||   
Sbjct: 3640 ggcaattgcaccaaaaattcgagttccttttggatttccttcttgatcaatgataacaac 3581

                                                                        
Query: 162  -gcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgt 220
             ||||||||||||||||| || ||||| |||||||  |||| ||| | ||||||||| ||
Sbjct: 3580 tgcagcattgtcatcatatcgtattatcataccgttgtcgcgttttagttctttacaagt 3521

                                                                        
Query: 221  acgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtc 280
            |||||||| ||||||||  || ||||| ||||||||||  ||| | | ||| | ||| ||
Sbjct: 3520 acgtacaactacagctctgatcacttctgatctttctaagggcgtgttggggattgcttc 3461

                                                                        
Query: 281  tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 340
            |||||| |||||||||||||| ||||||||||||||||||||  | || |    ||||||
Sbjct: 3460 tttgatcacagcaacaataacgtcaccaatacgagcatatcgacggttgc---tagctcc 3404

                                                                        
Query: 341  tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 400
            ||||| ||||||||||||||||| |||||| || || |||||||||||||| ||| ||||
Sbjct: 3403 tatgattcgaatacacatcaattctcgagccccgctgttgtctgctacattcaaatgggt 3344

                              
Query: 401  ctgaggttgaatcatatt 418
            ||||||||||||||||||
Sbjct: 3343 ctgaggttgaatcatatt 3326

to top

>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
             strain:Columbia
          Length = 154478

 Score =  250 bits (126), Expect = 4e-63
 Identities = 317/380 (83%), Gaps = 3/380 (0%)
 Strand = Plus / Plus

                                                                         
Query: 44    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 103
             ||||||||| ||||||||||||||||||||||| ||||| || |||| ||||||||||  
Sbjct: 80696 ttataatacctcaggagctaatgaaactattttagtaaagtttaattgtctcaattcccg 80755

                                                                         
Query: 104   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 163
              |  ||||| ||||||||||||||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 80756 tgggatcgccccaaaaactcgagttccttttggatttccttcttgatcaatgacaactgc 80815

                                                                         
Query: 164   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 223
              |||||||||||||| || |||||  | || |  |  | ||||| ||||||||| |||||
Sbjct: 80816 ggcattgtcatcatatcgtattatcgtcccattgttacgtttgagttctttacaagtacg 80875

                                                                         
Query: 224   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 283
             |||||||||||||| ||| ||||| ||||||||||||||  | |  || | ||| |||||
Sbjct: 80876 tacaattacagctctaatcacttctgatctttctagaggagtatttggtattgcttcttt 80935

                                                                         
Query: 284   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 343
             |||||||||||||||||| ||||||||| ||||||||||  ||||||    |||||||||
Sbjct: 80936 gattacagcaacaataacgtcaccaatatgagcatatcggcgattac---tagctcctat 80992

                                                                         
Query: 344   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 403
              | ||||||||||||||||| || ||| || || |||||||||||||| |||  ||| ||
Sbjct: 80993 tattcgaatacacatcaattctctagccccgctgttgtctgctacattcaaataggtttg 81052

                                 
Query: 404   aggttgaatcatattatttt 423
              ||||||||||||| |||||
Sbjct: 81053 tggttgaatcatatcatttt 81072

to top

>dbj|AP004556.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0026A08
          Length = 171272

 Score =  242 bits (122), Expect = 1e-60
 Identities = 158/170 (92%)
 Strand = Plus / Minus

                                                                        
Query: 143  tttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtcttcgca 202
            |||||||||||| |||||| | |||||||  |||||||| ||||||||||| ||||||||
Sbjct: 4998 tttttgatcaatgataacctctgcattgttgtcatagcgtattattataccatcttcgca 4939

                                                                        
Query: 203  tttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttctagagg 262
            |||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 4938 tttgaactctttacatgtatgtacaattacacctcaaattacttcggatctttctagagg 4879

                                                              
Query: 263  catttggggcaatgcgtctttgattacagcaacaataacatcaccaatac 312
            ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4878 catttggggcactgcgtctttgattacagcaacaataacatcaccaatac 4829

to top

>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0091M20
          Length = 132976

 Score =  242 bits (122), Expect = 1e-60
 Identities = 158/170 (92%)
 Strand = Plus / Minus

                                                                         
Query: 143   tttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtcttcgca 202
             |||||||||||| |||||| | |||||||  |||||||| ||||||||||| ||||||||
Sbjct: 88345 tttttgatcaatgataacctctgcattgttgtcatagcgtattattataccatcttcgca 88286

                                                                         
Query: 203   tttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttctagagg 262
             |||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 88285 tttgaactctttacatgtatgtacaattacacctcaaattacttcggatctttctagagg 88226

                                                               
Query: 263   catttggggcaatgcgtctttgattacagcaacaataacatcaccaatac 312
             ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 88225 catttggggcactgcgtctttgattacagcaacaataacatcaccaatac 88176

to top

>gb|DQ069424.1| Ranunculus macranthus ribosomal protein L14 (rpl14) gene, partial
           cds; chloroplast
          Length = 366

 Score =  238 bits (120), Expect = 2e-59
 Identities = 310/370 (83%), Gaps = 5/370 (1%)
 Strand = Plus / Minus

                                                                       
Query: 47  taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcg-g 105
           |||||||||||| ||||||||||||||||| ||||||||||| | |||||| || ||| |
Sbjct: 366 taatacttcaggggctaatgaaactattttagtaaaattcaactgtctcaactc-tcgag 308

                                                                       
Query: 106 caatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcag 165
           | || || ||||||||||||||||||||||| || |||| ||||||||| | ||| || |
Sbjct: 307 cgattgcaccaaaaactcgagttccttttggatttccttcttgatcaatgacaactgctg 248

                                                                       
Query: 166 cattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgta 225
           |||||||||||||  | ||||| ||||| |  || | ||||| ||||||||| || ||||
Sbjct: 247 cattgtcatcatattgtattatcataccattgtcacgtttgagttctttacacgtgcgta 188

                                                                       
Query: 226 caattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttga 285
           ||||||||||||  || ||||| ||||||| ||||||||| | ||| | ||| |||||||
Sbjct: 187 caattacagctctgatcacttctgatctttgtagaggcatattgggaactgcttctttga 128

                                                                       
Query: 286 ttacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatga 345
           |||| ||||||||||| || |||||| ||||||| ||  ||||||    |||||||||||
Sbjct: 127 ttaccgcaacaataacgtcgccaatatgagcataacgtcgattac---tagctcctatga 71

                                                                       
Query: 346 ctcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgag 405
            || ||||||||| ||||||| ||| || || ||||| ||||||||||||  ||||||||
Sbjct: 70  ttctaatacacattaattttctagccccgctgttgtccgctacatttaaataggtctgag 11

                     
Query: 406 gttgaatcat 415
           ||||||||||
Sbjct: 10  gttgaatcat 1

to top

>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score =  234 bits (118), Expect = 3e-58
 Identities = 306/368 (83%), Gaps = 3/368 (0%)
 Strand = Plus / Plus

                                                                         
Query: 48    aatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggca 107
             ||||| || ||||||||||| ||||| || || |||||||| | |||||||||| | || 
Sbjct: 87322 aatacctcgggagctaatgatactatcttagtgaaattcaaatgtctcaattccccagcg 87381

                                                                         
Query: 108   atcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagca 167
             ||||  ||||| ||||||||||||||||| || || | | ||||||| | ||| || |||
Sbjct: 87382 atcgaaccaaagactcgagttccttttggatttccctctggatcaataacaactgctgca 87441

                                                                         
Query: 168   ttgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtaca 227
             ||||||||||| || |||||||||||||  || | ||||| |||||||||||||||||||
Sbjct: 87442 ttgtcatcatatcgtattattataccgttgtcacgtttgagttctttacatgtacgtaca 87501

                                                                         
Query: 228   attacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgatt 287
             ||||||||||  || ||||| |||||||| || ||||| | ||| | ||| |||||||||
Sbjct: 87502 attacagctctgatcacttctgatctttccaggggcatattgggtactgcttctttgatt 87561

                                                                         
Query: 288   acagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgact 347
             |||||||||||||| ||||||||| ||||||||||  | ||||    |||||||| || |
Sbjct: 87562 acagcaacaataacgtcaccaatatgagcatatcgggggttac---tagctcctacgatt 87618

                                                                         
Query: 348   cgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggt 407
             |||||||||||||||| |||||| || || ||||| |||||||| |||  ||| |||| |
Sbjct: 87619 cgaatacacatcaattctcgagccccgctgttgtccgctacattcaaataggtttgagct 87678

                     
Query: 408   tgaatcat 415
             ||||||||
Sbjct: 87679 tgaatcat 87686

to top

>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete
             sequence
          Length = 163935

 Score =  234 bits (118), Expect = 3e-58
 Identities = 315/380 (82%), Gaps = 3/380 (0%)
 Strand = Plus / Plus

                                                                         
Query: 44    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 103
             ||||||||| ||||| ||||||||||||||||| || ||| | || ||||||||||| | 
Sbjct: 85802 ttataatacctcaggtgctaatgaaactattttagtgaaacttaactctctcaattcgtg 85861

                                                                         
Query: 104   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 163
             ||||||||| ||||||||||| ||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 85862 ggcaatcgcaccaaaaactcgggttccttttggatttccttcttgatcaatgacaacagc 85921

                                                                         
Query: 164   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 223
             ||||||||||||||| || ||||| |||||||| || ||||| | ||||||||| |||||
Sbjct: 85922 agcattgtcatcatatcgtattatgataccgtcgtcacatttaagttctttacaagtacg 85981

                                                                         
Query: 224   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 283
             ||||||||||||||  |  ||||| ||||||||||| |   |    || ||||| || ||
Sbjct: 85982 tacaattacagctctgaccacttctgatctttctagggaggtgcttggtaatgcttcctt 86041

                                                                         
Query: 284   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 343
             ||| |||||||||||||  ||||| ||| ||||||||||  ||||||    |||||| ||
Sbjct: 86042 gatcacagcaacaataatgtcaccgatatgagcatatcgacgattac---tagctccgat 86098

                                                                         
Query: 344   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 403
             || |||||||||||| |||| |||||| ||||| || || || ||||| ||| |||| ||
Sbjct: 86099 gattcgaatacacattaattctcgagccccactgttatccgcgacattcaaacgggtttg 86158

                                 
Query: 404   aggttgaatcatattatttt 423
             |||||||||||||| |||||
Sbjct: 86159 aggttgaatcatatcatttt 86178

to top

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score =  218 bits (110), Expect = 2e-53
 Identities = 313/380 (82%), Gaps = 3/380 (0%)
 Strand = Plus / Plus

                                                                         
Query: 44    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 103
             ||||||||| ||||| ||||||||||||||||| || ||||| || | |||||||||   
Sbjct: 85487 ttataatacctcaggtgctaatgaaactattttagtgaaatttaactgtctcaattctcg 85546

                                                                         
Query: 104   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 163
             ||||||||| ||||||||||||||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 85547 ggcaatcgcaccaaaaactcgagttccttttggatttccttcttgatcaatcacaactgc 85606

                                                                         
Query: 164   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 223
             |||||| |||||||| || ||||| |||||||  || | ||| | ||||||||| |||||
Sbjct: 85607 agcattatcatcatatcgtattatcataccgttgtcacgtttaagttctttacaagtacg 85666

                                                                         
Query: 224   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 283
             ||||||||||||||  || || || ||||||||||||||  | |  || ||||| || ||
Sbjct: 85667 tacaattacagctctgatcacctctgatctttctagaggtgtgtttggtaatgcttcctt 85726

                                                                         
Query: 284   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 343
             ||| |||||||||||||  ||||| ||| ||||||||||  ||||||    |||||||||
Sbjct: 85727 gatcacagcaacaataatgtcaccgatatgagcatatcggcgattac---tagctcctat 85783

                                                                         
Query: 344   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 403
             || || ||||||||| |||| ||| || || || || || |||||||| ||| || | ||
Sbjct: 85784 gattctaatacacattaattctcgggccccgctgttatccgctacattcaaatggctttg 85843

                                 
Query: 404   aggttgaatcatattatttt 423
             |||||||||||||| |||||
Sbjct: 85844 aggttgaatcatatcatttt 85863

to top

>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score =  216 bits (109), Expect = 6e-53
 Identities = 312/377 (82%), Gaps = 7/377 (1%)
 Strand = Plus / Plus

                                                                         
Query: 44    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 103
             ||||||||||||||||||||||||||||||||| ||||| || |||| ||||||||||  
Sbjct: 79787 ttataatacttcaggagctaatgaaactattttagtaaagtttaattgtctcaattcccg 79846

                                                                         
Query: 104   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 163
              |  ||||| |||||||| |||||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 79847 tgggatcgccccaaaaacgcgagttccttttggatttccttcttgatcaatgacaactgc 79906

                                                                         
Query: 164   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 223
              |||||||| ||||| || |||||  | || |  |  | ||||| ||||||||| |||||
Sbjct: 79907 ggcattgtcgtcatatcgtattatcgtcccattcttacgtttgagttctttacaagtacg 79966

                                                                         
Query: 224   tacaattacagctcgaattacttcggatctttctagag--gcatttggggcaatgcgtct 281
             ||||||||||||||  |  ||||| |||||||||||||  | |||||||  | ||| || 
Sbjct: 79967 tacaattacagctctgaccacttctgatctttctagagtagtatttggg--attgcttcc 80024

                                                                         
Query: 282   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 341
             |||||||||||||||||||| ||||||||| ||||||| ||  ||||||    |||||||
Sbjct: 80025 ttgattacagcaacaataacgtcaccaatatgagcatagcggcgattac---tagctcct 80081

                                                                         
Query: 342   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 401
             || | |||||||||||||||||||| ||| || || |||||||||||||| |||  ||| 
Sbjct: 80082 attattcgaatacacatcaattttctagccccgctgttgtctgctacattcaaataggtt 80141

                              
Query: 402   tgaggttgaatcatatt 418
             || ||||||||||||||
Sbjct: 80142 tgtggttgaatcatatt 80158

to top

>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score =  212 bits (107), Expect = 9e-52
 Identities = 313/381 (82%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 102
             |||||||||  ||||| ||||||||||||||||| || ||||| || | |||||||||| 
Sbjct: 78574 tttataatatctcaggcgctaatgaaactattttagtgaaattgaactgtctcaattccc 78633

                                                                         
Query: 103   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 162
              ||| || |||| ||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 78634 gggcgattgcgcaaaaaattcgagttccttttggatttccttcttgatcaatgacaactg 78693

                                                                         
Query: 163   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 222
             ||||||| ||||||||  | ||||||||||| |     | ||||| ||||||||| ||||
Sbjct: 78694 cagcattatcatcatactgtattattataccattgctacgtttgagttctttacaagtac 78753

                                                                         
Query: 223   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 282
             |||||||||||||||  || ||||| ||||||||||  ||  | |  || | ||| ||||
Sbjct: 78754 gtacaattacagctctgatcacttctgatctttctaagggtgtattcggtactgcttctt 78813

                                                                         
Query: 283   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 342
             ||||||||||||||| ||  |||||||||  ||| |||||  |||||| |||   |||||
Sbjct: 78814 tgattacagcaacaacaatgtcaccaatataagcgtatcgtcgattactagc---tccta 78870

                                                                         
Query: 343   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 402
             ||| |||||||||||||||||| || ||||| ||||| || |||||||||||| |||| |
Sbjct: 78871 tgattcgaatacacatcaatttgcgggctccgctattatcggctacatttaaatgggttt 78930

                                  
Query: 403   gaggttgaatcatattatttt 423
             ||||||||||||||| |||||
Sbjct: 78931 gaggttgaatcatatcatttt 78951

to top

>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome
          Length = 452528

 Score =  210 bits (106), Expect = 4e-51
 Identities = 277/334 (82%), Gaps = 15/334 (4%)
 Strand = Plus / Minus

                                                                         
Query: 34    ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattcaattctc 93
             |||||||||||| |||||| ||||||||| |||| ||| |||| || |||||||    ||
Sbjct: 99133 ctactagtatttttaatacctcaggagctcatgagactcttttagtgaaattcataagtc 99074

                                                                         
Query: 94    tcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaa 153
             ||||||||   || ||||| ||||||||||||||||||||||| || |||| ||||||||
Sbjct: 99073 tcaattcccgagcgatcgcaccaaaaactcgagttccttttggatttccttcttgatcaa 99014

                                                                         
Query: 154   ttataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctt 213
             | | |||||        |||||||| || ||||| |||||||  || | ||||| |||||
Sbjct: 99013 tgacaaccg--------tcatcatatcgtattatcataccgttgtcacgtttgagttctt 98962

                                                                         
Query: 214   tacatgtacgtacaattacagctcgaattacttcgg----atctttctagaggcatttgg 269
             |||||||||||||||||||||||||  ||||||| |    |||||||||||||||||| |
Sbjct: 98961 tacatgtacgtacaattacagctcgtcttacttctgtctgatctttctagaggcattttg 98902

                                                                         
Query: 270   ggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgatta 329
             |||| ||| ||||||||||||||||||||||| ||||||||| |||||||||  ||||||
Sbjct: 98901 ggcactgcttctttgattacagcaacaataacgtcaccaatatgagcatatcagtgatta 98842

                                               
Query: 330   ccagcagctcctatgactcgaatacacatcaatt 363
             |   ||||||||| || ||||||||| |||||||
Sbjct: 98841 c---cagctcctaagattcgaatacatatcaatt 98811

to top

>gb|M15176.1|MZECPPG Zea mays chloroplast Eco x DNA
          Length = 1368

 Score =  194 bits (98), Expect = 2e-46
 Identities = 104/106 (98%)
 Strand = Plus / Minus

                                                                        
Query: 218  tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgc 277
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1365 tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcactgc 1306

                                                          
Query: 278  gtctttgattacagcaacaataacatcaccaatacgagcatatcgc 323
            ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1305 gtctttgattacagcaataataacatcaccaatacgagcatatcgc 1260



 Score =  161 bits (81), Expect = 3e-36
 Identities = 101/105 (96%), Gaps = 2/105 (1%)
 Strand = Plus / Minus

                                                                        
Query: 384  gctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgttatttca 443
            ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||
Sbjct: 1199 gctacatttaaaagggtctgaggttgaatcatattatttgg-tttccatttgttatttca 1141

                                                         
Query: 444  a-tgcaaaaggatgaaagaaatattgtctttccagaaagaaaaac 487
            | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 aatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaac 1096



 Score =  107 bits (54), Expect = 4e-20
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                        
Query: 262  gcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcatatc 321
            |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1261 gcatttggggcactgcgtctttgattacagcaataataacatcaccaatacgagcatatc 1202

              
Query: 322  gc 323
            ||
Sbjct: 1201 gc 1200



 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                        
Query: 514  ttttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggccg 573
            |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 1068 ttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggcag 1009

               
Query: 574  cta 576
            |||
Sbjct: 1008 cta 1006

to top

>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0229B10
          Length = 114509

 Score =  186 bits (94), Expect = 5e-44
 Identities = 146/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                         
Query: 47    taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 106
             |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 54859 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattccttggc 54918

                                                                         
Query: 107   aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 166
              || ||||||||||| | |||||| ||||| || ||||||| |||||| |||||||||||
Sbjct: 54919 gattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcagc 54977

                                                       
Query: 167   attgtcatcatagcggattattataccgtcttcgcatttgaa 208
             |||||  |||||||| ||||||||||||||||||||||||||
Sbjct: 54978 attgttgtcatagcgtattattataccgtcttcgcatttgaa 55019

to top

>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0569E11
          Length = 157319

 Score =  186 bits (94), Expect = 5e-44
 Identities = 146/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                          
Query: 47     taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 106
              |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 137662 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattccttggc 137721

                                                                          
Query: 107    aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 166
               || ||||||||||| | |||||| ||||| || ||||||| |||||| |||||||||||
Sbjct: 137722 gattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcagc 137780

                                                        
Query: 167    attgtcatcatagcggattattataccgtcttcgcatttgaa 208
              |||||  |||||||| ||||||||||||||||||||||||||
Sbjct: 137781 attgttgtcatagcgtattattataccgtcttcgcatttgaa 137822

to top

>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0091C18
          Length = 154416

 Score =  186 bits (94), Expect = 5e-44
 Identities = 146/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                          
Query: 47     taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 106
              |||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 130073 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattcctcggc 130132

                                                                          
Query: 107    aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 166
               || ||||||||||| | |||||| ||||| || ||||||| |||||| |||||||||||
Sbjct: 130133 cattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcagc 130191

                                                        
Query: 167    attgtcatcatagcggattattataccgtcttcgcatttgaa 208
              | |||  |||||||| ||||||||||||||||||||||||||
Sbjct: 130192 actgttgtcatagcgtattattataccgtcttcgcatttgaa 130233

to top

>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1770_H03
          Length = 189893

 Score =  186 bits (94), Expect = 5e-44
 Identities = 146/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                         
Query: 47    taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 106
             |||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 66843 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattcctcggc 66902

                                                                         
Query: 107   aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 166
              || ||||||||||| | |||||| ||||| || ||||||| |||||| |||||||||||
Sbjct: 66903 cattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcagc 66961

                                                       
Query: 167   attgtcatcatagcggattattataccgtcttcgcatttgaa 208
             | |||  |||||||| ||||||||||||||||||||||||||
Sbjct: 66962 actgttgtcatagcgtattattataccgtcttcgcatttgaa 67003

to top

>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion,
              complete genome
          Length = 491515

 Score =  170 bits (86), Expect = 3e-39
 Identities = 212/254 (83%), Gaps = 15/254 (5%)
 Strand = Plus / Minus

                                                                          
Query: 114    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 173
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 331098 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 331047

                                                                          
Query: 174    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 233
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 331046 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 330987

                                                                          
Query: 234    gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 289
              |||||  ||||||| |    |||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 330986 gctcgtcttacttctgtctgatctttctagaggcattttgggcactgcttctttgattac 330927

                                                                          
Query: 290    agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 349
              |||||||||||| ||||||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 330926 agcaacaataacgtcaccaatatgagcatatcagtgattac---cagctcctaagattcg 330870

                            
Query: 350    aatacacatcaatt 363
              |||||| |||||||
Sbjct: 330869 aatacatatcaatt 330856



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                    
Query: 34     ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattca 87
              ||||||||||||||||||| ||||||||| |||| ||| |||| || |||||||
Sbjct: 331166 ctactagtatttataatacctcaggagctcatgagactctttttgtgaaattca 331113

to top

>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion,
              complete genome
          Length = 490673

 Score =  170 bits (86), Expect = 3e-39
 Identities = 212/254 (83%), Gaps = 15/254 (5%)
 Strand = Plus / Minus

                                                                          
Query: 114    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 173
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 330288 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 330237

                                                                          
Query: 174    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 233
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 330236 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 330177

                                                                          
Query: 234    gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 289
              |||||  ||||||| |    |||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 330176 gctcgtcttacttctgtctgatctttctagaggcattttgggcactgcttctttgattac 330117

                                                                          
Query: 290    agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 349
              |||||||||||| ||||||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 330116 agcaacaataacgtcaccaatatgagcatatcagtgattac---cagctcctaagattcg 330060

                            
Query: 350    aatacacatcaatt 363
              |||||| |||||||
Sbjct: 330059 aatacatatcaatt 330046



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                    
Query: 34     ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattca 87
              ||||||||||||||||||| ||||||||| |||| ||| |||| || |||||||
Sbjct: 330356 ctactagtatttataatacctcaggagctcatgagactctttttgtgaaattca 330303

to top

>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion,
              complete genome
          Length = 490669

 Score =  170 bits (86), Expect = 3e-39
 Identities = 212/254 (83%), Gaps = 15/254 (5%)
 Strand = Plus / Minus

                                                                          
Query: 114    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 173
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 330285 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 330234

                                                                          
Query: 174    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 233
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 330233 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 330174

                                                                          
Query: 234    gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 289
              |||||  ||||||| |    |||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 330173 gctcgtcttacttctgtctgatctttctagaggcattttgggcactgcttctttgattac 330114

                                                                          
Query: 290    agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 349
              |||||||||||| ||||||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 330113 agcaacaataacgtcaccaatatgagcatatcagtgattac---cagctcctaagattcg 330057

                            
Query: 350    aatacacatcaatt 363
              |||||| |||||||
Sbjct: 330056 aatacatatcaatt 330043



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                    
Query: 34     ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattca 87
              ||||||||||||||||||| ||||||||| |||| ||| |||| || |||||||
Sbjct: 330353 ctactagtatttataatacctcaggagctcatgagactctttttgtgaaattca 330300

to top

>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome
          Length = 490520

 Score =  170 bits (86), Expect = 3e-39
 Identities = 212/254 (83%), Gaps = 15/254 (5%)
 Strand = Plus / Minus

                                                                          
Query: 114    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 173
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 330142 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 330091

                                                                          
Query: 174    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 233
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 330090 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 330031

                                                                          
Query: 234    gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 289
              |||||  ||||||| |    |||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 330030 gctcgtcttacttctgtctgatctttctagaggcattttgggcactgcttctttgattac 329971

                                                                          
Query: 290    agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 349
              |||||||||||| ||||||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 329970 agcaacaataacgtcaccaatatgagcatatcagtgattac---cagctcctaagattcg 329914

                            
Query: 350    aatacacatcaatt 363
              |||||| |||||||
Sbjct: 329913 aatacatatcaatt 329900



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                    
Query: 34     ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattca 87
              ||||||||||||||||||| ||||||||| |||| ||| |||| || |||||||
Sbjct: 330210 ctactagtatttataatacctcaggagctcatgagactctttttgtgaaattca 330157

to top

>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence,
            complete sequence
          Length = 27470

 Score =  163 bits (82), Expect = 8e-37
 Identities = 143/162 (88%), Gaps = 1/162 (0%)
 Strand = Plus / Minus

                                                                        
Query: 47   taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 106
            |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 5365 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattccttggc 5306

                                                                        
Query: 107  aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 166
             || || |||||||| | |||||| ||||| || ||||||| |||||| ||||||| |||
Sbjct: 5305 gattgcaccaaaaacgcaagttccatttggatttccttttt-atcaatgataaccgtagc 5247

                                                      
Query: 167  attgtcatcatagcggattattataccgtcttcgcatttgaa 208
            | |||| |||||||| |||||||||| |||||||||||||||
Sbjct: 5246 actgtcgtcatagcgtattattatactgtcttcgcatttgaa 5205

to top

>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score =  155 bits (78), Expect = 2e-34
 Identities = 144/165 (87%), Gaps = 7/165 (4%)
 Strand = Plus / Minus

                                                                         
Query: 203   tttgaattctttacatgtacgtacaattacagctcgaattacttcgg----atctttcta 258
             ||||| ||||||||||||||||||||||||||||||  ||||||| |    |||||||||
Sbjct: 37711 tttgagttctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttcta 37652

                                                                         
Query: 259   gaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcat 318
             ||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 37651 gaggcattttgggcactgcttctttgattacagcaacaataacgtcaccaatatgagcat 37592

                                                          
Query: 319   atcgctgattaccagcagctcctatgactcgaatacacatcaatt 363
             |||  |||||||   ||||||||| || ||||||||| |||||||
Sbjct: 37591 atcagtgattac---cagctcctaagattcgaatacatatcaatt 37550

to top

>dbj|D13105.1|RICMT09 Oryza sativa (japonica cultivar-group) mitochondrial rp114
           pseudogene, clone:pMTVSCT13
          Length = 645

 Score =  155 bits (78), Expect = 2e-34
 Identities = 210/254 (82%), Gaps = 15/254 (5%)
 Strand = Plus / Plus

                                                                       
Query: 114 ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 173
           ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 161 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 212

                                                                       
Query: 174 tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 233
           ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 213 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 272

                                                                       
Query: 234 gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 289
           |||||  ||||||| |    |||||||||||| ||||| ||||| ||| |||||||||||
Sbjct: 273 gctcgtcttacttctgtctgatctttctagagccattttgggcactgcttctttgattac 332

                                                                       
Query: 290 agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 349
           |||||||||||| || |||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 333 agcaacaataacgtccccaatatgagcatatcagtgattac---cagctcctaagattcg 389

                         
Query: 350 aatacacatcaatt 363
           |||||| |||||||
Sbjct: 390 aatacatatcaatt 403



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 34  ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattca 87
           ||||||||||||||||||| ||||||||| |||| ||| |||| || |||||||
Sbjct: 93  ctactagtatttataatacctcaggagctcatgagactctttttgtgaaattca 146

to top

>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0465E03
          Length = 151206

 Score =  153 bits (77), Expect = 8e-34
 Identities = 80/81 (98%)
 Strand = Plus / Minus

                                                                          
Query: 408    tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 467
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147871 tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 147812

                                   
Query: 468    gtctttccagaaagaaaaacc 488
              |||||||||||||||| ||||
Sbjct: 147811 gtctttccagaaagaagaacc 147791



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                  
Query: 525    tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
              ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 147753 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 147702

to top

>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1585_D02
          Length = 103172

 Score =  153 bits (77), Expect = 8e-34
 Identities = 80/81 (98%)
 Strand = Plus / Minus

                                                                         
Query: 408   tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 467
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55633 tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 55574

                                  
Query: 468   gtctttccagaaagaaaaacc 488
             |||||||||||||||| ||||
Sbjct: 55573 gtctttccagaaagaagaacc 55553



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                 
Query: 525   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgcta 576
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 55515 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagcta 55464

to top

>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0439E07
          Length = 176486

 Score =  145 bits (73), Expect = 2e-31
 Identities = 160/189 (84%)
 Strand = Plus / Minus

                                                                         
Query: 132   tttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattata 191
             ||||| || |||||||||||||| |||||  | |||||||  | |||| | |||||||||
Sbjct: 33438 tttggatttcctttttgatcaatgataacgactgcattgttgttatagagtattattata 33379

                                                                         
Query: 192   ccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggat 251
             |||| || ||||||||| ||  |||||||| | |||||||||| ||| |||||||  |||
Sbjct: 33378 ccgtttttgcatttgaaatccatacatgtatgcacaattacagatcgtattacttttgat 33319

                                                                         
Query: 252   ctttctagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaata 311
             |||||||||||||| | || || ||| ||||| |||||||||||||||||||||||||||
Sbjct: 33318 ctttctagaggcatcttggacactgcatcttttattacagcaacaataacatcaccaata 33259

                      
Query: 312   cgagcatat 320
             |||| ||||
Sbjct: 33258 cgagtatat 33250

to top

>gb|AF536225.1| Vigna angularis chloroplast S10B operon, partial sequence
          Length = 6550

 Score =  141 bits (71), Expect = 3e-30
 Identities = 179/215 (83%)
 Strand = Plus / Minus

                                                                        
Query: 44   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 103
            ||||||||| ||||| ||||||||||||||||| || ||||| || | ||||||||||  
Sbjct: 5904 ttataatacctcaggtgctaatgaaactattttagtgaaatttaactgtctcaattcccg 5845

                                                                        
Query: 104  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 163
            ||| || |||| ||| | ||||||||||||||| || |||| ||||||||||||||| ||
Sbjct: 5844 ggcgattgcgcaaaagattcgagttccttttggatttccttcttgatcaattataactgc 5785

                                                                        
Query: 164  agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 223
            |||||| ||||||||  | |||||||||||||     | ||| | || |||||| |||||
Sbjct: 5784 agcattatcatcatactgaattattataccgttgctacgttttagttgtttacaagtacg 5725

                                               
Query: 224  tacaattacagctcgaattacttcggatctttcta 258
            ||||||||||||||  || ||||| ||||||||||
Sbjct: 5724 tacaattacagctctgatcacttcagatctttcta 5690



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 116/143 (81%), Gaps = 3/143 (2%)
 Strand = Plus / Minus

                                                                        
Query: 281  tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 340
            ||||||||||||||||| ||  || ||||||  |||||||||  |||||| |||   |||
Sbjct: 5667 tttgattacagcaacaacaatgtcgccaatataagcatatcgtcgattactagc---tcc 5611

                                                                        
Query: 341  tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 400
            || || |||||||||||||| ||  || ||||| || || || |||||||| ||| | ||
Sbjct: 5610 taggattcgaatacacatcagttcacgtgctccgctgttatccgctacattcaaatgagt 5551

                                   
Query: 401  ctgaggttgaatcatattatttt 423
             |||||||||||||||| |||||
Sbjct: 5550 ttgaggttgaatcatatcatttt 5528

to top

>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1046_F10
          Length = 118472

 Score =  141 bits (71), Expect = 3e-30
 Identities = 126/143 (88%), Gaps = 1/143 (0%)
 Strand = Plus / Minus

                                                                         
Query: 66    gaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcga 125
             ||||||||||| |||||||||||||||||||||| |||| | |||||||||||||| | |
Sbjct: 87867 gaaactattttagtaaaattcaattctctcaattactcgacgatcgcgccaaaaacgcaa 87808

                                                                         
Query: 126   gttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggatt 185
             ||||| ||||| || ||||||| |  ||| ||| |||  ||||||||||||||||| |||
Sbjct: 87807 gttccatttggatttccttttt-actaatgatatccgttgcattgtcatcatagcgtatt 87749

                                    
Query: 186   attataccgtcttcgcatttgaa 208
             |||||||||||||||||||||||
Sbjct: 87748 attataccgtcttcgcatttgaa 87726

to top

>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence
          Length = 124033

 Score =  139 bits (70), Expect = 1e-29
 Identities = 306/382 (80%), Gaps = 7/382 (1%)
 Strand = Plus / Minus

                                                                         
Query: 44    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 103
             ||||||||| || || ||||||||||||||||| || ||||| || | |||||||||   
Sbjct: 45042 ttataatacctcgggtgctaatgaaactattttagtgaaatttaactgtctcaattctcg 44983

                                                                         
Query: 104   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 163
             ||| || |||  ||||| ||||||||||||||| || |||| || |||||| | ||||||
Sbjct: 44982 ggctattgcggaaaaaattcgagttccttttggatttccttctttatcaatgagaaccgc 44923

                                                                         
Query: 164   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 223
              ||||| ||||||||    ||||||||||| |     | ||| | ||||||||| |||||
Sbjct: 44922 cgcattatcatcatactttattattataccattactacgttttagttctttacaagtacg 44863

                                                                         
Query: 224   tacaattacagctcgaattacttcggatctttctagag--gcatttggggcaatgcgtct 281
             |||||||||||| |  || ||||| |||||||||| ||  | ||||||  |  ||| | |
Sbjct: 44862 tacaattacagccctgatcacttcagatctttctaaagatgaatttggtac--tgctttt 44805

                                                                         
Query: 282   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 341
             |||||||||||||||| ||  |||||||||  |||||| ||  |||||| |||   ||||
Sbjct: 44804 ttgattacagcaacaacaatgtcaccaatataagcataccgtcgattactagc---tcct 44748

                                                                         
Query: 342   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 401
             |||| |||||||||||||||||  || ||||| ||||| || ||||||||||||  ||| 
Sbjct: 44747 atgattcgaatacacatcaattcgcgggctccgctattatcggctacatttaaataggtt 44688

                                   
Query: 402   tgaggttgaatcatattatttt 423
             |||||||||||||||| |||||
Sbjct: 44687 tgaggttgaatcatatcatttt 44666

to top

>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome
          Length = 152218

 Score =  125 bits (63), Expect = 2e-25
 Identities = 177/215 (82%)
 Strand = Plus / Plus

                                                                         
Query: 44    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 103
             ||||||||| || || ||||||||||||||||| || ||||| || | ||||||||||  
Sbjct: 79709 ttataatacctcgggtgctaatgaaactattttagtgaaatttaactgtctcaattcccg 79768

                                                                         
Query: 104   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 163
             ||| || || | ||| | ||||||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 79769 ggcgattgcacaaaagattcgagttccttttggatttccttcttgatcaatgacaactgc 79828

                                                                         
Query: 164   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 223
             |||||| ||||||||  | |||||||||||||     | ||||| ||||||||| |||||
Sbjct: 79829 agcattatcatcatactgaattattataccgttgctacgtttgagttctttacaagtacg 79888

                                                
Query: 224   tacaattacagctcgaattacttcggatctttcta 258
             ||||||||||||||  || ||||| ||||||||||
Sbjct: 79889 tacaattacagctctgatcacttctgatctttcta 79923



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 118/143 (82%), Gaps = 3/143 (2%)
 Strand = Plus / Plus

                                                                         
Query: 281   tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 340
             ||||||||||||||||| ||  |||||||||  |||||||||  |||||| |||   |||
Sbjct: 79946 tttgattacagcaacaacaatgtcaccaatataagcatatcgtcgattactagc---tcc 80002

                                                                         
Query: 341   tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 400
             || || |||||||||||||| ||  || ||||| ||||| || |||||||| ||| | ||
Sbjct: 80003 taggattcgaatacacatcagttcgcgtgctccgctattatcagctacattcaaatgagt 80062

                                    
Query: 401   ctgaggttgaatcatattatttt 423
              |||||||||||||||| |||||
Sbjct: 80063 ttgaggttgaatcatatcatttt 80085

to top

>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
          Length = 119707

 Score =  123 bits (62), Expect = 7e-25
 Identities = 119/138 (86%)
 Strand = Plus / Plus

                                                                         
Query: 39    agtatttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaat 98
             |||| |||||||||||| ||||| |||||||||||||| || |||||||||| |||||||
Sbjct: 60553 agtacttataatacttcgggagccaatgaaactattttcgtgaaattcaattgtctcaat 60612

                                                                         
Query: 99    tcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattata 158
             ||||  |||| ||  ||||||||||||||||||||||| || ||||  |||||||| | |
Sbjct: 60613 tcctgagcaaccggaccaaaaactcgagttccttttggatttccttcctgatcaatgaca 60672

                               
Query: 159   accgcagcattgtcatca 176
             || || ||||||||||||
Sbjct: 60673 acggctgcattgtcatca 60690



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 336   gctcctatgactcgaatacacatcaattttcgagctccact 376
             |||||||  |||||||||||||| | |||||| ||||||||
Sbjct: 60847 gctcctagaactcgaatacacattatttttcgggctccact 60887

to top

>emb|X68048.1|CHPVHISG Phaseolus vulgaris chloroplast DNA for tRNA-His gene region
          Length = 1698

 Score =  117 bits (59), Expect = 4e-23
 Identities = 176/215 (81%)
 Strand = Plus / Plus

                                                                        
Query: 44   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 103
            ||||||||| || || ||||||||||||||||| || ||||| || | ||||||||||  
Sbjct: 954  ttataatacctcgggtgctaatgaaactattttagtgaaatttaactgtctcaattcccg 1013

                                                                        
Query: 104  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 163
            ||| || |||| ||| | ||||||||||||||| || |||| ||||||||||| ||| ||
Sbjct: 1014 ggcgattgcgcaaaagattcgagttccttttggatttccttcttgatcaattacaactgc 1073

                                                                        
Query: 164  agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 223
            |||||| ||||||||  | |||||||||||||     | ||| | || |||||| || ||
Sbjct: 1074 agcattatcatcatactgaattattataccgttgctacgttttagttgtttacaagtccg 1133

                                               
Query: 224  tacaattacagctcgaattacttcggatctttcta 258
            ||||||||||||||  || ||||| ||||||||||
Sbjct: 1134 tacaattacagctctgatcacttctgatctttcta 1168



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 388  catttaaaagggtctgaggttgaatcatattatttt 423
            |||||||| | || |||||||||||||||| |||||
Sbjct: 1296 catttaaatgagtttgaggttgaatcatatcatttt 1331

to top

>gb|AC133862.6| Medicago truncatula clone mth2-30d7, complete sequence
          Length = 130054

 Score =  115 bits (58), Expect = 2e-22
 Identities = 249/310 (80%), Gaps = 7/310 (2%)
 Strand = Plus / Plus

                                                                         
Query: 116   aaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatc 175
             ||||| ||||||||||||||| || |||| || |||||| | |||||| ||||| |||||
Sbjct: 30545 aaaaattcgagttccttttggatttccttctttatcaatgagaaccgccgcattatcatc 30604

                                                                         
Query: 176   atagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagc 235
             |||    ||||||||||| |     | ||| | ||||||||| |||||||||||||||||
Sbjct: 30605 atactttattattataccattactacgttttagttctttacaagtacgtacaattacagc 30664

                                                                         
Query: 236   tcgaattacttcggatctttctagag--gcatttggggcaatgcgtctttgattacagca 293
              |  || ||||| |||||||||| ||  | ||||||  |  ||| | |||||||||||||
Sbjct: 30665 cctgatcacttcagatctttctaaagatgaatttggtac--tgcttttttgattacagca 30722

                                                                         
Query: 294   acaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaata 353
             |||| ||  |||||||||  |||||| ||  |||||| |||   |||||||| |||||||
Sbjct: 30723 acaacaatgtcaccaatataagcataccgtcgattactagc---tcctatgattcgaata 30779

                                                                         
Query: 354   cacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatc 413
             ||||||||||  || ||||| ||||| || ||||||||||||  ||| ||||||||||||
Sbjct: 30780 cacatcaattcgcgggctccgctattatcggctacatttaaataggtttgaggttgaatc 30839

                       
Query: 414   atattatttt 423
             |||| |||||
Sbjct: 30840 atatcatttt 30849

to top

>gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete sequence
          Length = 140624

 Score =  115 bits (58), Expect = 2e-22
 Identities = 249/310 (80%), Gaps = 7/310 (2%)
 Strand = Plus / Minus

                                                                          
Query: 116    aaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatc 175
              ||||| ||||||||||||||| || |||| || |||||| | |||||| ||||| |||||
Sbjct: 114958 aaaaattcgagttccttttggatttccttctttatcaatgagaaccgccgcattatcatc 114899

                                                                          
Query: 176    atagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagc 235
              |||    ||||||||||| |     | ||| | ||||||||| |||||||||||||||||
Sbjct: 114898 atactttattattataccattactacgttttagttctttacaagtacgtacaattacagc 114839

                                                                          
Query: 236    tcgaattacttcggatctttctagag--gcatttggggcaatgcgtctttgattacagca 293
               |  || ||||| |||||||||| ||  | ||||||  |  ||| | |||||||||||||
Sbjct: 114838 cctgatcacttcagatctttctaaagatgaatttggtac--tgcttttttgattacagca 114781

                                                                          
Query: 294    acaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaata 353
              |||| ||  |||||||||  |||||| ||  |||||| |||   |||||||| |||||||
Sbjct: 114780 acaacaatgtcaccaatataagcataccgtcgattactagc---tcctatgattcgaata 114724

                                                                          
Query: 354    cacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatc 413
              ||||||||||  || ||||| ||||| || ||||||||||||  ||| ||||||||||||
Sbjct: 114723 cacatcaattcgcgggctccgctattatcggctacatttaaataggtttgaggttgaatc 114664

                        
Query: 414    atattatttt 423
              |||| |||||
Sbjct: 114663 atatcatttt 114654

to top

>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome
          Length = 116866

 Score =  115 bits (58), Expect = 2e-22
 Identities = 118/138 (85%)
 Strand = Plus / Plus

                                                                         
Query: 39    agtatttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaat 98
             |||| |||||| ||||| ||||| |||||||||||||| || |||||||||| |||||||
Sbjct: 58649 agtacttataagacttcgggagccaatgaaactattttagtgaaattcaattgtctcaat 58708

                                                                         
Query: 99    tcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattata 158
             ||||  |||| ||  ||||||||||||||||||||||| || ||||  |||||||| | |
Sbjct: 58709 tcctgagcaaccggaccaaaaactcgagttccttttggatttccttcctgatcaatgaca 58768

                               
Query: 159   accgcagcattgtcatca 176
             || || ||||||||||||
Sbjct: 58769 acggctgcattgtcatca 58786



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 336   gctcctatgactcgaatacacatcaattttcgagctccact 376
             |||||||  |||||||||||||| | |||||| ||||||||
Sbjct: 58943 gctcctagaactcgaatacacattatttttcgggctccact 58983

to top

>gb|M60180.1|OBECPRPB O.ammophila ribosomal protein L14 and S8 (rpl14, rps8) genes, 5'
           end and 3' end
          Length = 625

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 82/93 (88%)
 Strand = Plus / Plus

                                                                       
Query: 44  ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 103
           ||||||||| ||||| ||||||||||||||||| || ||| | || ||||||||||| | 
Sbjct: 524 ttataatacctcaggtgctaatgaaactattttagtgaaacttaactctctcaattcgtg 583

                                            
Query: 104 ggcaatcgcgccaaaaactcgagttccttttgg 136
           ||||||||| ||||||||||| |||||||||||
Sbjct: 584 ggcaatcgcaccaaaaactcgggttccttttgg 616

to top

>dbj|AB077366.1| Iris bungei plastid DNA, intron region
          Length = 576

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                       
Query: 388 catttaaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgc 447
           |||||||||||||||||||||||||||||| ||||| |||| ||| ||||||||||||||
Sbjct: 568 catttaaaagggtctgaggttgaatcatatcatttttatttgaatctgttatttcaatgc 509

              
Query: 448 aaa 450
           |||
Sbjct: 508 aaa 506

to top

>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome
          Length = 165372

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 106/126 (84%)
 Strand = Plus / Minus

                                                                         
Query: 51    acttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggcaatc 110
             |||||||||||||| ||||||||||| |||||||| || |||||||||||   |||||  
Sbjct: 41481 acttcaggagctaaagaaactattttagtaaaatttaagtctctcaattctctggcaact 41422

                                                                         
Query: 111   gcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattg 170
             |  ||||||||||| |||||| |||| ||||||| |||||  || | |||||||||||| 
Sbjct: 41421 ggaccaaaaactcgtgttcctcttggattgccttcttgattgatgacaaccgcagcatta 41362

                   
Query: 171   tcatca 176
             ||||||
Sbjct: 41361 tcatca 41356



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                         
Query: 348   cgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggt 407
             ||||||||||| |  ||||||||||| || ||||| ||||||||||||   | |||||||
Sbjct: 41187 cgaatacacatgagctttcgagctccgctgttgtcggctacatttaaataagactgaggt 41128

                     
Query: 408   tgaatcat 415
             ||||||||
Sbjct: 41127 tgaatcat 41120

to top

>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
          Length = 121024

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 113/136 (83%)
 Strand = Plus / Plus

                                                                         
Query: 41    tatttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattc 100
             ||||||||| ||||| |||||||| ||||||||||| ||||||||  ||||||| |||||
Sbjct: 76250 tatttataaaacttctggagctaacgaaactattttagtaaaattagattctcttaattc 76309

                                                                         
Query: 101   ctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataac 160
                 ||||| |  ||||||||||||||||||||||| || |||| ||||| ||| | |||
Sbjct: 76310 tctagcaattggaccaaaaactcgagttccttttggatttccttcttgattaataacaac 76369

                             
Query: 161   cgcagcattgtcatca 176
              || ||||| ||||||
Sbjct: 76370 tgctgcattatcatca 76385



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                         
Query: 338   tcctatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaag 397
             |||||| |||||||| ||||| | |||||||||||||||||| ||||| |||||||||  
Sbjct: 76544 tcctataactcgaatgcacattagttttcgagctccactattatctgcaacatttaaata 76603

                               
Query: 398   ggtctgaggttgaatcat 415
              || ||||||||||||||
Sbjct: 76604 agtttgaggttgaatcat 76621



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 207   aattctttacatgtacgtacaattacagctc 237
             ||||||||||| |||||||||||||||||||
Sbjct: 76416 aattctttacacgtacgtacaattacagctc 76446

to top

>emb|AL663020.4|OSJN00220 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0049H08,
             complete sequence
          Length = 186642

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                                
Query: 220   tacgtacaattacagctcgaattacttcggatctttctagaggcatttggg 270
             |||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 94927 tacgtacaattacagctcaaattacttcggatctttccagaggcatttggg 94877

to top

>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome
          Length = 122890

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 114/135 (84%), Gaps = 2/135 (1%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 102
             |||||||||||||||| ||||| ||||||||||| ||||||||  |||| |  ||||| |
Sbjct: 79910 tttataatacttcaggtgctaacgaaactattttagtaaaattagattcacgtaattc-t 79968

                                                                         
Query: 103   cg-gcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc 161
             || ||||  | ||||||||||||||||||||| || || |||| ||||| ||| ||||| 
Sbjct: 79969 cgtgcaacagggccaaaaactcgagttcctttaggatttccttcttgattaataataact 80028

                            
Query: 162   gcagcattgtcatca 176
             |||||||| ||||||
Sbjct: 80029 gcagcattatcatca 80043



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                         
Query: 351   atacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttga 410
             |||||||| ||||| || ||||||||||| || ||||||||||||   || |||||||||
Sbjct: 80215 atacacattaatttgcgcgctccactattatcagctacatttaaataagtttgaggttga 80274

                  
Query: 411   atcat 415
             |||||
Sbjct: 80275 atcat 80279

to top

>dbj|AB087469.1| Anthoceros formosae chloroplast rpl14 mRNA for ribosomal protein
           L14, complete cds
          Length = 460

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 347 tcgaatacacatcaattttcgagctccactattgtctgctacatttaaa 395
           |||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 322 tcgaatacacatcagttttcgagctccactgttgtctgctacatttaaa 370



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 209 ttctttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcat 265
           ||||||||| ||||||||||||||||||| || |||||| ||| ||| |||||||||
Sbjct: 187 ttctttacaagtacgtacaattacagctctaactacttctgatttttttagaggcat 243



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 ccaaaaactcgagttccttt 133
           ||||||||||||||||||||
Sbjct: 92  ccaaaaactcgagttccttt 111

to top

>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome
          Length = 161162

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                               
Query: 347    tcgaatacacatcaattttcgagctccactattgtctgctacatttaaa 395
              |||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 100021 tcgaatacacatcagttttcgagctccactgttgtctgctacatttaaa 100069



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                      
Query: 209   ttctttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcat 265
             ||||||||| ||||||||||||||||||| || |||||| ||| ||| |||||||||
Sbjct: 99886 ttctttacaagtacgtacaattacagctctaactacttctgatttttttagaggcat 99942



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   ccaaaaactcgagttccttt 133
             ||||||||||||||||||||
Sbjct: 99791 ccaaaaactcgagttccttt 99810

to top

>gb|M60179.1|OBECPRPA O.ammophila ribosomal protein L14 and L16 (rpl14, rpl16) genes, 3'
           end and 5' end
          Length = 542

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 112/135 (82%), Gaps = 3/135 (2%)
 Strand = Plus / Plus

                                                                       
Query: 289 cagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactc 348
           ||||||||||||  ||||| ||| ||||||||||  |||||| |||   ||| |||| ||
Sbjct: 1   cagcaacaataatgtcaccgatatgagcatatcgacgattactagc---tccgatgattc 57

                                                                       
Query: 349 gaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggtt 408
           |||||||||| |||| |||||| ||||| || || || ||||| ||| |||| |||||||
Sbjct: 58  gaatacacattaattctcgagccccactgttatccgcgacattcaaacgggtttgaggtt 117

                          
Query: 409 gaatcatattatttt 423
           ||||||||| |||||
Sbjct: 118 gaatcatatcatttt 132

to top

>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome
          Length = 154373

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                
Query: 43   tttataatacttcaggagctaatgaaactattttggtaaaattcaattctct 94
            ||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 5586 tttataatacttcaggagccaatgaaactattttagtaaaattgaattctct 5535



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                        
Query: 347  tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 406
            ||||||||||||   ||||  ||||||||| |||||||||||||| |||   || |||||
Sbjct: 5285 tcgaatacacattggttttttagctccactgttgtctgctacattcaaatacgtttgagg 5226

                        
Query: 407  ttgaatcatatt 418
            ||||||||||||
Sbjct: 5225 ttgaatcatatt 5214

to top

>emb|AL662985.3|OSJN00189 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095H06,
             complete sequence
          Length = 126447

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 73/84 (86%), Gaps = 4/84 (4%)
 Strand = Plus / Plus

                                                                         
Query: 211   ctttacatgtacgtacaattacagctcgaattact----tcggatctttctagaggcatt 266
             ||||||||||||||||||||||||||||  |||||    || ||||||||||||||||||
Sbjct: 89363 ctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttctagaggcatt 89422

                                     
Query: 267   tggggcaatgcgtctttgattaca 290
             | ||||| ||| |||||| |||||
Sbjct: 89423 ttgggcactgcttctttggttaca 89446

to top

>dbj|AP004038.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1004_H01
          Length = 121377

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                          
Query: 98     ttcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattat 157
              ||||||||| |||| ||||||||| |||||||||||||| || | ||||||| |||| ||
Sbjct: 117502 ttcctcggcgatcgtgccaaaaacgcgagttccttttggatttcttttttgaccaatgat 117561

                                
Query: 158    aaccgcagcattgtcatc 175
              |||||  |||||||||||
Sbjct: 117562 aaccgttgcattgtcatc 117579

to top

>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome
          Length = 138829

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                         
Query: 347   tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 406
             |||||||||||||||||||||||||||||| ||||||| ||| ||||||    | |||||
Sbjct: 79713 tcgaatacacatcaattttcgagctccactgttgtctgttacttttaaataactttgagg 79772

                      
Query: 407   ttgaatcat 415
             |||||||||
Sbjct: 79773 ttgaatcat 79781



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 52    cttcaggagctaatgaaactattttggtaaaatt 85
             ||||||||||||| || |||||||| ||||||||
Sbjct: 79421 cttcaggagctaaagatactattttagtaaaatt 79454

to top

>dbj|AB077439.1| Sophora alopecuroides plastid DNA, intron region
          Length = 569

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                               
Query: 388 catttaaaagggtctgaggttgaatcatattatttt 423
           ||||||||||||||||||||||||||||||||||||
Sbjct: 561 catttaaaagggtctgaggttgaatcatattatttt 526

to top

>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0506A10
          Length = 145265

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 101/124 (81%), Gaps = 8/124 (6%)
 Strand = Plus / Minus

                                                                          
Query: 114    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 173
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 127299 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 127248

                                                                          
Query: 174    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 233
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||| 
Sbjct: 127247 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattact 127188

                  
Query: 234    gctc 237
              ||||
Sbjct: 127187 gctc 127184



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 114    ccaaaaactcgagttccttttgggttgcctttttgat 150
              ||||||||||||||||||||||| || |||| |||||
Sbjct: 126033 ccaaaaactcgagttccttttggatttccttcttgat 125997



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 114    ccaaaaactcgagttccttttgggttgcctttttgat 150
              ||||||||||||||||||||||| || |||| |||||
Sbjct: 121959 ccaaaaactcgagttccttttggatttccttcttgat 121923

to top

>gb|DQ069422.1| Ginkgo biloba ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 108/130 (83%), Gaps = 2/130 (1%)
 Strand = Plus / Minus

                                                                       
Query: 47  taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcg-g 105
           ||||||||| ||||| |||| ||||||||| || ||||| |||| ||||||||| ||| |
Sbjct: 366 taatacttcgggagccaatggaactatttttgtgaaattaaattgtctcaattc-tcgag 308

                                                                       
Query: 106 caatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcag 165
           |||  |  |||||||||||||||||||| || || ||||  |||||||| | ||| || |
Sbjct: 307 caactgaaccaaaaactcgagttcctttcggatttccttcctgatcaatgacaactgctg 248

                     
Query: 166 cattgtcatc 175
           ||||||||||
Sbjct: 247 cattgtcatc 238

to top

>gb|M80799.1|VIRCPRPL Vigna unguiculata chloroplast ribosomal protein (L16 and L14) genes,
            3' and 5' end respectively
          Length = 1268

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 116/143 (81%), Gaps = 3/143 (2%)
 Strand = Plus / Minus

                                                                        
Query: 281  tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 340
            ||||||||||||||||| ||  || ||||||  |||||||||  |||||| |||   |||
Sbjct: 1258 tttgattacagcaacaacaatgtcgccaatataagcatatcgtcgattactagc---tcc 1202

                                                                        
Query: 341  tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 400
            || || |||||||||||||| ||  || ||||| || || || |||||||| ||| | ||
Sbjct: 1201 taggattcgaatacacatcagttcacgtgctccgctgttatccgctacattcaaatgagt 1142

                                   
Query: 401  ctgaggttgaatcatattatttt 423
             |||||||||||||||| |||||
Sbjct: 1141 ttgaggttgaatcatatcatttt 1119

to top

>dbj|AB077337.1| Saussurea involucrata plastid DNA, intron region
          Length = 541

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                               
Query: 388 catttaaaagggtctgaggttgaatcatattatttt 423
           |||||||||||||||||||||||||||||| |||||
Sbjct: 533 catttaaaagggtctgaggttgaatcatatgatttt 498

to top

>emb|X03834.1|CHSOL16 Spirodela oligorhiza chloroplast gene for ribosomal protein L16
          Length = 2064

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 384  gctacatttaaaagggtctgaggttgaatcatattatttt 423
            |||||||| ||||||||||||||||||||||||| |||||
Sbjct: 2049 gctacattcaaaagggtctgaggttgaatcatatcatttt 2010

to top

>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome
          Length = 161452

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                 
Query: 345    actcgaatacacatcaattttcgagctccactattgtctgctacatttaaa 395
              |||||||||||||| ||||| ||||| |||||||| || ||||||||||||
Sbjct: 140455 actcgaatacacattaatttgcgagcaccactattatcagctacatttaaa 140505



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 51     acttcaggagctaatgaaactattttggtaaaatt 85
              |||||||||||||| ||||| ||||| ||||||||
Sbjct: 140167 acttcaggagctaaagaaacaatttttgtaaaatt 140201

to top

>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1175_B01
          Length = 96191

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 79    taaaattcaattctctcaattcctcggcaatcgcgccaaaaac 121
             ||||||||||| ||||| |||||||||| ||||||||||||||
Sbjct: 20850 taaaattcaatactctcgattcctcggcgatcgcgccaaaaac 20808

to top

>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome
          Length = 151933

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                         
Query: 351   atacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttga 410
             |||||||| |||||||| ||||||||||| ||||| || |||| |   || |||||||||
Sbjct: 16479 atacacattaattttcgtgctccactattatctgcgacgtttacatatgtttgaggttga 16420

                      
Query: 411   atcatatta 419
             |||||||||
Sbjct: 16419 atcatatta 16411

to top

>dbj|AB077335.1| Allium altaicum plastid DNA, intron region
          Length = 551

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 388 catttaaaagggtctgaggttgaatcata 416
           |||||||||||||||||||||||||||||
Sbjct: 543 catttaaaagggtctgaggttgaatcata 515

to top

>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome
          Length = 150568

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 348   cgaatacacatcaattttcgagctccactattgtctgctacatttaaa 395
             |||||||||||||| || |||||||| ||||| |||||||||| ||||
Sbjct: 76668 cgaatacacatcaacttgcgagctccgctattatctgctacatctaaa 76715

to top

>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome
          Length = 203828

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 348   cgaatacacatcaattttcgagctccactattgtctgctacatttaaa 395
             ||||||||||| ||||  ||||| |||||||| |||||||||||||||
Sbjct: 28989 cgaatacacattaattcacgagcaccactattatctgctacatttaaa 28942



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 211   ctttacatgtacgtacaattacagctcg 238
             |||||| |||||||||||| ||||||||
Sbjct: 29123 ctttacgtgtacgtacaataacagctcg 29096

to top

>dbj|AB077365.1| Iris dichotoma plastid DNA, intron region
          Length = 566

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 388 catttaaaagggtctgaggttgaatcat 415
           ||||||||||||||||||||||||||||
Sbjct: 558 catttaaaagggtctgaggttgaatcat 531

to top

>emb|X14062.1|CHCRL14 Chlamydomonas reinhardtii plasti gene for ribosomal protein L14
          Length = 988

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 348 cgaatacacatcaattttcgagctccactattgtctgctacatttaaa 395
           ||||||||||| ||||  ||||| |||||||| |||||||||||||||
Sbjct: 588 cgaatacacattaattcacgagcaccactattatctgctacatttaaa 541



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 211 ctttacatgtacgtacaattacagctcg 238
           |||||| |||||||||||| ||||||||
Sbjct: 722 ctttacgtgtacgtacaataacagctcg 695

to top

>gb|M30487.1|CPACYRP Cyanophora paradoxa ribosomal protein l22 (rpl22) gene, partial cds;
            ribosomal protein s3 (rps3), ribosomal protein l16
            (rpl16), ribosomal protein l7 (rpl7), ribosomal protein
            l14 (rpl14), ribosomal protein l5 (rpl5), ribosomal
            protein s8 (rps8), ribosomal protein l6 (rpl6), ribosomal
            protein l18 (rpl18), ribosomal protein s5 (rps5), and
            ribosomal protein secY (secY) genes, complete cds; and
            ORF gene, partial cds
          Length = 6468

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 345  actcgaatacacatcaattttcgagctccactatt 379
            |||||||||||||| ||||| ||||||||||||||
Sbjct: 1744 actcgaatacacattaatttacgagctccactatt 1710



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 45   tataatacttcaggagctaatgaaactattttggtaaaatt 85
            ||||||||||| |||||||| ||||  ||||| ||||||||
Sbjct: 2041 tataatacttccggagctaaagaaataatttttgtaaaatt 2001



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 287  tacagcaacaataacatcaccaatacgagcata 319
            |||||| ||||| ||||||||||| ||||||||
Sbjct: 1799 tacagcgacaattacatcaccaattcgagcata 1767

to top

>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137492

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 70    ctattttggtaaaattcaattctctcaattc 100
             ||||||| |||||||||||||||||||||||
Sbjct: 45211 ctattttagtaaaattcaattctctcaattc 45181

to top

>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome
          Length = 135599

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 345   actcgaatacacatcaattttcgagctccactatt 379
             |||||||||||||| ||||| ||||||||||||||
Sbjct: 52478 actcgaatacacattaatttacgagctccactatt 52512



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 287   tacagcaacaataacatcaccaatacgagcata 319
             |||||| ||||| ||||||||||| ||||||||
Sbjct: 52423 tacagcgacaattacatcaccaattcgagcata 52455



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 45    tataatacttcaggagctaatgaaactattttggtaaaatt 85
             ||||||||||| |||||||| ||||  ||||| ||||||||
Sbjct: 52181 tataatacttccggagctaaagaaataatttttgtaaaatt 52221

to top

>gb|AF050665.1|AF050665 Spirogyra maxima tRNA-Ile gene, complete sequence; and ribosomal
            protein L23 (rpl23), ribosomal protein L2 (rpl2),
            ribosomal protein S19 (rps19), ribosomal protein L22
            (rpl22), ribosomal protein S3 (rps3), ribosomal protein
            L16 (rpl16), ribosomal protein L14 (rpl14), ribosomal
            protein S8 (rps8), initiation factor A (infA), ribosomal
            protein L36 (rpl36), ribosomal protein S11 (rps11), and
            RNA polymerase alpha subunit (rpoA) genes, complete cds,
            chloroplast genes for chloroplast products
          Length = 8794

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 51   acttcaggagctaatgaaactattttggtaaaattcaattctctcaattc 100
            |||||||||||||| || ||||| || |||||||| |||||||| |||||
Sbjct: 5584 acttcaggagctaaagatactatcttagtaaaatttaattctcttaattc 5535



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 348  cgaatacacatcaattttcgagctccact 376
            ||||||||||| ||||| |||||||||||
Sbjct: 5290 cgaatacacattaatttacgagctccact 5262

to top

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                       
Query: 351    atacacatcaattttcgagctccactattgtctgctacatt 391
              |||||||||||||| ||||| || ||||||||||| |||||
Sbjct: 879333 atacacatcaatttacgagcgccgctattgtctgcgacatt 879293

to top

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 351     atacacatcaattttcgagctccactattgtctgctacatt 391
               |||||||||||||| ||||| || ||||||||||| |||||
Sbjct: 5047012 atacacatcaatttacgagcgccgctattgtctgcgacatt 5047052

to top

>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome
          Length = 157089

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                 
Query: 364   ttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcat 415
             |||||||||||||||| || ||||||||||||   |  ||||||||||||||
Sbjct: 94493 ttcgagctccactattatcggctacatttaaataagattgaggttgaatcat 94442

to top

>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0007C02, complete sequence
          Length = 148265

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 295   caataacatcaccaatacgagcatatcgctgattaccagc 334
             ||||||| ||||||||| |||||||||  |||||||||||
Sbjct: 98741 caataacgtcaccaatatgagcatatcagtgattaccagc 98780

to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 295      caataacatcaccaatacgagcatatcgctgattaccagc 334
                ||||||| ||||||||| |||||||||  |||||||||||
Sbjct: 11796144 caataacgtcaccaatatgagcatatcagtgattaccagc 11796105

to top

>dbj|AB077333.1| Ferula feruloides plastid DNA, intron region
          Length = 531

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 388 catttaaaagggtctgaggttgaa 411
           ||||||||||||||||||||||||
Sbjct: 523 catttaaaagggtctgaggttgaa 500

to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 295      caataacatcaccaatacgagcatatcgctgattaccagc 334
                ||||||| ||||||||| |||||||||  |||||||||||
Sbjct: 11874555 caataacgtcaccaatatgagcatatcagtgattaccagc 11874516

to top

>ref|NM_128441.3| Arabidopsis thaliana structural constituent of ribosome AT2G28820
           mRNA, complete cds
          Length = 1156

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 285 attacagcaacaataacatcaccaatacgagcata 319
           ||||| ||||||| ||||||||||||| |||||||
Sbjct: 999 attacggcaacaacaacatcaccaatatgagcata 965

to top

>emb|AL359081.10| Human DNA sequence from clone RP11-541F9 on chromosome 1, complete
             sequence
          Length = 109288

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 64    atgaaactattttggtaaaattcaatt 90
             |||||||||||||||||| ||||||||
Sbjct: 91500 atgaaactattttggtaacattcaatt 91474

to top

>gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map mi54, complete
             sequence
          Length = 107097

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 285   attacagcaacaataacatcaccaatacgagcata 319
             ||||| ||||||| ||||||||||||| |||||||
Sbjct: 38089 attacggcaacaacaacatcaccaatatgagcata 38123

to top

>gb|AY219111.2| Arabidopsis thaliana hypothetical protein (At2g28820/F8N16.11) mRNA,
            complete cds
          Length = 1179

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 285  attacagcaacaataacatcaccaatacgagcata 319
            ||||| ||||||| ||||||||||||| |||||||
Sbjct: 1002 attacggcaacaacaacatcaccaatatgagcata 968

to top

>dbj|AP000606.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MTO24
          Length = 82360

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 414   atattattttgatttcaatttgttatt 440
             |||||||||||||||||| ||||||||
Sbjct: 13778 atattattttgatttcaaattgttatt 13752

to top

>dbj|AB028608.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K20I9
          Length = 43500

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 49    atacttcaggagctaatgaaactattt 75
             |||| ||||||||||||||||||||||
Sbjct: 22874 atacctcaggagctaatgaaactattt 22900

to top

>gb|AC157473.1| Medicago truncatula chromosome 7 BAC clone mte1-11e4, complete sequence
          Length = 125310

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 389   atttaaaagggtctgaggttgaa 411
             |||||||||||||||||||||||
Sbjct: 65424 atttaaaagggtctgaggttgaa 65402

to top

>gb|AC132335.3| Mus musculus BAC clone RP24-230C24 from chromosome 10, complete sequence
          Length = 180642

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 450    aaggatgaaagaaatattgtctttcc 475
              |||||||||||||||||| |||||||
Sbjct: 116209 aaggatgaaagaaatattttctttcc 116234

to top

>dbj|AB025638.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWF20
          Length = 91193

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 416   attattttgatttcaatttgtt 437
             ||||||||||||||||||||||
Sbjct: 90746 attattttgatttcaatttgtt 90725

to top

>dbj|AB077440.1| Incarvillea potaninii plastid DNA, intron region
          Length = 536

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 29/30 (96%), Gaps = 1/30 (3%)
 Strand = Plus / Minus

                                         
Query: 388 catttaaaagggtctgaggttgaatcatat 417
           |||||||||||| |||||||||||||||||
Sbjct: 528 catttaaaaggg-ctgaggttgaatcatat 500

to top

>dbj|AB077334.1| Zygophyllum pterocarpum plastid DNA, intron region
          Length = 553

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 29/30 (96%), Gaps = 1/30 (3%)
 Strand = Plus / Minus

                                         
Query: 388 catttaaaagggtctgaggttgaatcatat 417
           |||||||||||| |||||||||||||||||
Sbjct: 545 catttaaaaggg-ctgaggttgaatcatat 517

to top

>gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosome 10, complete sequence
          Length = 217425

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 450    aaggatgaaagaaatattgtctttcc 475
              |||||||||||||||||| |||||||
Sbjct: 184750 aaggatgaaagaaatattttctttcc 184775

to top

>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome
          Length = 2427734

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 129     ccttttgggttgcctttttga 149
               |||||||||||||||||||||
Sbjct: 1617545 ccttttgggttgcctttttga 1617565



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 44     ttataatacttcaggagctaatgaaactatttt 76
              |||||| ||||||||||||| |||||| |||||
Sbjct: 352059 ttataaaacttcaggagctagtgaaacgatttt 352027

to top

>emb|CT009479.4| M.truncatula DNA sequence from clone MTH2-164E3 on chromosome 3,
             complete sequence
          Length = 133351

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 439   tttcaatgcaaaaggatgaaagaaa 463
             ||||||| |||||||||||||||||
Sbjct: 58265 tttcaatacaaaaggatgaaagaaa 58241

to top

>emb|CR753838.10| Zebrafish DNA sequence from clone DKEY-189H5 in linkage group 5,
             complete sequence
          Length = 188660

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 64    atgaaactattttggtaaaat 84
             |||||||||||||||||||||
Sbjct: 13532 atgaaactattttggtaaaat 13552

to top

>emb|AL606489.26| Human DNA sequence from clone RP11-739N20 on chromosome 1 Contains the
             5' end of the gene for phosphoinositol 3-phosphate-binding
             protein-3 (PEPP3), two novel genes, the  PPP1R15B gene for
             protein phosphatase 1, regulatory (inhibitor) subunit 15B,
             the PIK3C2B gene for phosphoinositide-3-kinase, class 2,
             beta polypeptide, a small nuclear ribonucleoprotein
             polypeptide F (SNRPF) pseudogene and three CpG islands,
             complete sequence
          Length = 167079

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 467   tgtctttccagaaagaaaaac 487
             |||||||||||||||||||||
Sbjct: 87284 tgtctttccagaaagaaaaac 87304

to top

>ref|XM_503361.1| Yarrowia lipolytica CLIB122, YALI0E00154g predicted mRNA
          Length = 2382

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 288 acagcaacaataacatcacca 308
           |||||||||||||||||||||
Sbjct: 263 acagcaacaataacatcacca 283

to top

>emb|AL359821.11| Human DNA sequence from clone RP11-175G14 on chromosome 1 Contains part
             of the NEGR1 gene for neuronal growth regulator 1 and part
             of a novel gene, complete sequence
          Length = 117951

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 456   gaaagaaatattgtctttccagaaa 480
             |||||||||||||||||| ||||||
Sbjct: 43956 gaaagaaatattgtctttacagaaa 43980

to top

>emb|AL355355.25| Human DNA sequence from clone RP11-730A19 on chromosome 10 Contains the
              5' end of a novel gene (DKFZP761F241) (FLJ20925 FLJ38473),
              a ribosomal protein L5 (RPL5) pseudogene, the OPTN gene for
              optineurin, a small nuclear ribonucleoprotein polypeptide G
              (SNRPG) pseudogene, a pseudogene similar to part of COX10
              homolog, cytochrome c oxidase assembly protein heme A:
              farnesyltransferase (yeast) (COX10), a novel pseudogene
              (FLJ10648 KIAA1525), a ribosomal protein L36A (RPL36A)
              pseudogene, the 5' end of the  MCM10 gene for MCM10
              minichromosome maintenance deficient 10 (S. cerevisiae), a
              pseudogene similar to part of chromodomain protein Y
              chromosome 1 (CDY1) and two CpG islands, complete sequence
          Length = 196203

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 425    atttcaatttgttatttcaat 445
              |||||||||||||||||||||
Sbjct: 148025 atttcaatttgttatttcaat 148045

to top

>emb|AL122003.17|HSJ659I19 Human DNA sequence from clone RP4-659I19 on chromosome 1q42.11-42.3
             Contains a chromosome 9 open reading frame 78 (C9orf78)
             pseudogene, a novel gene (MGC13186), the 3' end of a novel
             gene (FLJ11383) and a CpG island, complete sequence
          Length = 155065

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 63    aatgaaactattttggtaaaa 83
             |||||||||||||||||||||
Sbjct: 66463 aatgaaactattttggtaaaa 66483

to top

>emb|AL162752.2|NMA1Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment
              1/7
          Length = 340806

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 44     ttataatacttcaggagctaatgaaactatttt 76
              ||||||||||||||| || |||||||| |||||
Sbjct: 109779 ttataatacttcaggtgccaatgaaacgatttt 109811

to top

>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04,
             complete sequence
          Length = 136713

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 426   tttcaatttgttatttcaatgcaaa 450
             ||||||||||| |||||||||||||
Sbjct: 83648 tttcaatttgtaatttcaatgcaaa 83672

to top

>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome
          Length = 195867

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                         
Query: 348   cgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggt 407
             ||||| ||||||||||||   || || ||||| || |||||||||||||  || ||||||
Sbjct: 31433 cgaatgcacatcaatttttttgcaccgctattatcagctacatttaaaatagtttgaggt 31374

                      
Query: 408   tgaatcata 416
              ||||||||
Sbjct: 31373 cgaatcata 31365

to top

>gb|AC025821.7| Homo sapiens BAC clone RP11-472F4 from 4, complete sequence
          Length = 178378

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 449   aaaggatgaaagaaatattgt 469
             |||||||||||||||||||||
Sbjct: 10896 aaaggatgaaagaaatattgt 10876

to top

>dbj|AK034773.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430035O09 product:RAD17 homolog (S. pombe), full
            insert sequence
          Length = 2615

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 417  ttattttgatttcaatttgtt 437
            |||||||||||||||||||||
Sbjct: 1994 ttattttgatttcaatttgtt 2014

to top

>gb|AE002098.2| Neisseria meningitidis MC58, complete genome
          Length = 2272360

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 44     ttataatacttcaggagctaatgaaactatttt 76
              ||||||||||||||| || |||||||| |||||
Sbjct: 156967 ttataatacttcaggtgccaatgaaacgatttt 156935



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 418     tattttgatttcaatttgttattt 441
               ||||||||||| ||||||||||||
Sbjct: 1406237 tattttgattttaatttgttattt 1406214

to top

>gb|AC109358.3| Homo sapiens BAC clone RP11-648D16 from 2, complete sequence
          Length = 49153

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 72    attttggtaaaattcaattct 92
             |||||||||||||||||||||
Sbjct: 27739 attttggtaaaattcaattct 27719

to top

>gb|AC073885.5| Homo sapiens BAC clone RP11-70L16 from 2, complete sequence
          Length = 120379

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 79    taaaattcaattctctcaatt 99
             |||||||||||||||||||||
Sbjct: 93691 taaaattcaattctctcaatt 93671

to top

>gb|AF283525.1|AF283519S7 Homo sapiens FIP2 gene, exons 11, 12 and 13
          Length = 5047

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 425 atttcaatttgttatttcaat 445
           |||||||||||||||||||||
Sbjct: 151 atttcaatttgttatttcaat 171

to top

>dbj|AK120872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026M09, full
            insert sequence
          Length = 5675

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 426  tttcaatttgttatttcaatgcaaa 450
            ||||||||||| |||||||||||||
Sbjct: 2487 tttcaatttgtaatttcaatgcaaa 2511

to top

>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome
          Length = 2153922

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 44      ttataatacttcaggagctaatgaaactatttt 76
               ||||||||||||||| || |||||||| |||||
Sbjct: 1801391 ttataatacttcaggtgccaatgaaacgatttt 1801423

to top

>emb|BX322606.6| Zebrafish DNA sequence from clone DKEY-40F12, complete sequence
          Length = 240928

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 64     atgaaactattttggtaaaat 84
              |||||||||||||||||||||
Sbjct: 106739 atgaaactattttggtaaaat 106759

to top

>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome
          Length = 191028

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 348    cgaatacacatcaattttcgagctccactattgtctgctac 388
              ||||||||||| | ||||| ||| |||||||| ||||||||
Sbjct: 100999 cgaatacacattatttttctagcgccactattatctgctac 101039

to top

>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia
            lipolytica
          Length = 4224103

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 288  acagcaacaataacatcacca 308
            |||||||||||||||||||||
Sbjct: 6095 acagcaacaataacatcacca 6075

to top

>gb|AC165159.2| Mus musculus BAC clone RP23-234N1 from chromosome 13, complete sequence
          Length = 215158

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 417   ttattttgatttcaatttgtt 437
             |||||||||||||||||||||
Sbjct: 79695 ttattttgatttcaatttgtt 79675

to top

>ref|XM_639569.1| Dictyostelium discoideum histidine kinase (DDB0185039), partial mRNA
          Length = 5211

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 289  cagcaacaataacatcacca 308
            ||||||||||||||||||||
Sbjct: 1427 cagcaacaataacatcacca 1446

to top

>ref|XM_639498.1| Dictyostelium discoideum histidine kinase DhkI (DDB0217151), partial
            mRNA
          Length = 5211

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 289  cagcaacaataacatcacca 308
            ||||||||||||||||||||
Sbjct: 1427 cagcaacaataacatcacca 1446

to top

>ref|XM_634860.1| Dictyostelium discoideum hypothetical protein (DDB0186277), partial
           mRNA
          Length = 4602

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 418 tattttgatttcaatttgttattt 441
           ||||||||||||||||| ||||||
Sbjct: 413 tattttgatttcaattttttattt 390

to top

>gb|AC167973.4| Mus musculus BAC clone RP23-453B4 from chromosome 9, complete sequence
          Length = 182190

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 469    tctttccagaaagaaaaacc 488
              ||||||||||||||||||||
Sbjct: 127972 tctttccagaaagaaaaacc 127953

to top

>gb|AC153856.23| Mus musculus 10 BAC RP23-468J15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 188027

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tactagtatttataatactt 54
              ||||||||||||||||||||
Sbjct: 140243 tactagtatttataatactt 140224

to top

>gb|AY681321.1| Agelena orientalis toxin-like structure Agel_24 precursor, mRNA,
           complete cds
          Length = 378

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 419 attttgatttcaatttgtta 438
           ||||||||||||||||||||
Sbjct: 245 attttgatttcaatttgtta 264

to top

>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    tctttgattacagcaacaat 298
              ||||||||||||||||||||
Sbjct: 129128 tctttgattacagcaacaat 129147

to top

>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence
          Length = 141360

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 376    tattgtctgctacatttaaa 395
              ||||||||||||||||||||
Sbjct: 112737 tattgtctgctacatttaaa 112756

to top

>emb|CT025560.9| Mouse DNA sequence from clone RP23-432N22 on chromosome 16, complete
             sequence
          Length = 212903

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 381   tctgctacatttaaaagggt 400
             ||||||||||||||||||||
Sbjct: 68129 tctgctacatttaaaagggt 68148

to top

>emb|CR450788.7| Zebrafish DNA sequence from clone DKEY-15P23 in linkage group 12,
             complete sequence
          Length = 115480

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   gtcttcgcatttgaattctt 213
             ||||||||||||||||||||
Sbjct: 71969 gtcttcgcatttgaattctt 71950

to top

>emb|BX005436.12| Zebrafish DNA sequence from clone DKEY-9A8 in linkage group 6, complete
             sequence
          Length = 168549

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   tgattacagcaacaataaca 302
             ||||||||||||||||||||
Sbjct: 82901 tgattacagcaacaataaca 82920

to top

>emb|Z76735.1|HS246O8 Human DNA sequence from clone RP1-246O8 on chromosome X, complete
             sequence
          Length = 175745

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     attaattctttgatctaaat 28
             ||||||||||||||||||||
Sbjct: 99502 attaattctttgatctaaat 99521

to top

>emb|AL603882.13| Human DNA sequence from clone RP11-630I5 on chromosome 1 Contains the
             5' end of the gene for microtubule associated testis
             specific serine/threonine protein kinase (MAST205), a
             ribosomal protein L6 (RPL6) pseudogene and a CpG island,
             complete sequence
          Length = 78745

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   aaatattgtctttccagaaa 480
             ||||||||||||||||||||
Sbjct: 30144 aaatattgtctttccagaaa 30163

to top

>gb|AC163342.2| Mus musculus BAC clone RP24-115M13 from chromosome 9, complete sequence
          Length = 204620

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 469   tctttccagaaagaaaaacc 488
             ||||||||||||||||||||
Sbjct: 21328 tctttccagaaagaaaaacc 21309

to top

>emb|BX572101.1| Prochlorococcus marinus MIT9313 complete genome; segment 7/7
          Length = 318136

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 441   tcaatgcaaaaggatgaaag 460
             ||||||||||||||||||||
Sbjct: 72832 tcaatgcaaaaggatgaaag 72851

to top

>gb|AC159379.14| Mus musculus 10 BAC RP23-210F14 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 226172

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 444   atgcaaaaggatgaaagaaatatt 467
             ||||||||||| ||||||||||||
Sbjct: 40830 atgcaaaaggaagaaagaaatatt 40853

to top

>emb|AL627283.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
              complete chromosome; segment 19/20
          Length = 249050

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     ttcctcggcaatcgcgccaa 117
              ||||||||||||||||||||
Sbjct: 190554 ttcctcggcaatcgcgccaa 190535

to top

>gb|AC156991.9| Mus musculus chromosome 8, clone RP23-297F23, complete sequence
          Length = 164343

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 458    aagaaatattgtctttccag 477
              ||||||||||||||||||||
Sbjct: 135640 aagaaatattgtctttccag 135659

to top

>emb|BX510930.15| Zebrafish DNA sequence from clone DKEY-91L18 in linkage group 14,
             complete sequence
          Length = 95848

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 410   aatcatattattttgatttc 429
             ||||||||||||||||||||
Sbjct: 64510 aatcatattattttgatttc 64491

to top

>gb|CP000268.1| Rhodoferax ferrireducens DSM 15236 plasmid1, complete sequence
          Length = 257447

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    accaatacgagcatatcgct 324
              ||||||||||||||||||||
Sbjct: 204840 accaatacgagcatatcgct 204859

to top

>gb|AC108100.2| Homo sapiens chromosome 5 clone RP11-125A21, complete sequence
          Length = 85231

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 425   atttcaatttgttatttcaa 444
             ||||||||||||||||||||
Sbjct: 32554 atttcaatttgttatttcaa 32573

to top

>gb|AC010406.7| Homo sapiens chromosome 5 clone CTD-2154H6, complete sequence
          Length = 95089

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   catttgaattctttacatgt 220
             ||||||||||||||||||||
Sbjct: 65739 catttgaattctttacatgt 65720

to top

>emb|BX664600.7| Zebrafish DNA sequence from clone CH211-112M13, complete sequence
          Length = 167489

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     attaattctttgatctaaat 28
             ||||||||||||||||||||
Sbjct: 80174 attaattctttgatctaaat 80193

to top

>gb|AC159542.8| Mus musculus 10 BAC RP23-137B10 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 198525

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 444    atgcaaaaggatgaaagaaatatt 467
              ||||||||||| ||||||||||||
Sbjct: 197474 atgcaaaaggaagaaagaaatatt 197497

to top

>gb|AC136037.2| Rattus norvegicus X BAC CH230-378N18 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 98442

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 151   caattataaccgcagcattgtcat 174
             ||||||||||| ||||||||||||
Sbjct: 22762 caattataacctcagcattgtcat 22785

to top

>gb|AC087254.2| Danio rerio clone 91J1, complete sequence
          Length = 77731

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     attaattctttgatctaaat 28
             ||||||||||||||||||||
Sbjct: 59268 attaattctttgatctaaat 59249

to top

>gb|AF362371.1|AF362371 Dictyostelium discoideum histidine kinase DhkI (dhkI) gene, complete
            cds
          Length = 6074

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 289  cagcaacaataacatcacca 308
            ||||||||||||||||||||
Sbjct: 1666 cagcaacaataacatcacca 1685

to top

>gb|AC103567.2| Caenorhabditis elegans cosmid Y51F10, complete sequence
          Length = 89249

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 62    taatgaaactattttggtaaaatt 85
             |||||||||| |||||||||||||
Sbjct: 60315 taatgaaacttttttggtaaaatt 60338

to top

>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome
          Length = 118360

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 348   cgaatacacatcaattttcgagctccactattgtctgctacatt 391
             ||||||||||| | ||||  ||| |||||||| |||||||||||
Sbjct: 15771 cgaatacacattatttttttagcgccactattatctgctacatt 15814

to top

>gb|AC116330.2| Dictyostelium discoideum chromosome 2 map 3191214-3323468 strain AX4,
             complete sequence
          Length = 132254

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   cagcaacaataacatcacca 308
             ||||||||||||||||||||
Sbjct: 42174 cagcaacaataacatcacca 42155

to top

>gb|AC010423.8| Homo sapiens chromosome 5 clone CTD-2193G5, complete sequence
          Length = 183787

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    catttgaattctttacatgt 220
              ||||||||||||||||||||
Sbjct: 143582 catttgaattctttacatgt 143601

to top

>gb|AE016754.1| Mus musculus chromosome 10 high-growth region, section 2 of 2 of the
              complete sequence
          Length = 303688

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 444    atgcaaaaggatgaaagaaatatt 467
              ||||||||||| ||||||||||||
Sbjct: 256147 atgcaaaaggaagaaagaaatatt 256124

to top

>emb|BX511028.13| Zebrafish DNA sequence from clone DKEY-161N17 in linkage group 20,
              complete sequence
          Length = 225010

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      attaattctttgatctaaat 28
              ||||||||||||||||||||
Sbjct: 146084 attaattctttgatctaaat 146065

to top

>emb|CT010464.7| M.truncatula DNA sequence from clone MTH2-95O22 on chromosome 3,
             complete sequence
          Length = 117153

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 418   tattttgatttcaatttgttattt 441
             ||||||| ||||||||||||||||
Sbjct: 28243 tattttgttttcaatttgttattt 28266

to top

>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 98      ttcctcggcaatcgcgccaa 117
               ||||||||||||||||||||
Sbjct: 4645443 ttcctcggcaatcgcgccaa 4645424

to top

>gb|AF041468.1| Guillardia theta complete plastid genome
          Length = 121524

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                          
Query: 351    atacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttga 410
              |||||||| | ||||  ||||||||| || || |||||| |||||   ||||||| ||||
Sbjct: 103777 atacacattatttttttagctccactgttatcagctacagttaaataagtctgagtttga 103718

                          
Query: 411    atcatattattt 422
              ||||||| ||||
Sbjct: 103717 atcatataattt 103706

to top

>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 98      ttcctcggcaatcgcgccaa 117
               ||||||||||||||||||||
Sbjct: 4620428 ttcctcggcaatcgcgccaa 4620409

to top

>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 72      attttggtaaaattcaattc 91
               ||||||||||||||||||||
Sbjct: 2952252 attttggtaaaattcaattc 2952271

to top

>gb|AC154414.2| Mus musculus BAC clone RP24-231D24 from 16, complete sequence
          Length = 157232

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 381    tctgctacatttaaaagggt 400
              ||||||||||||||||||||
Sbjct: 141843 tctgctacatttaaaagggt 141824

to top

>gb|AC158600.17| Mus musculus 10 BAC RP24-211K19 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 165879

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tactagtatttataatactt 54
             ||||||||||||||||||||
Sbjct: 72121 tactagtatttataatactt 72140



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tactagtatttataatactt 54
             ||||||||||||||||||||
Sbjct: 19820 tactagtatttataatactt 19801

to top

>emb|CR385050.10| Zebrafish DNA sequence from clone DKEY-22I16 in linkage group 1, complete
              sequence
          Length = 145760

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 418    tattttgatttcaatttgtt 437
              ||||||||||||||||||||
Sbjct: 109311 tattttgatttcaatttgtt 109292

to top

>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome
          Length = 131183

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 348   cgaatacacatcaattttcgagctccactattgtctgctacatt 391
             ||||||||||| | ||| || ||||||||||| ||||| |||||
Sbjct: 84071 cgaatacacataattttacgggctccactattatctgcaacatt 84114



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 207   aattctttacatgtacgtacaattacagctcg 238
             ||||||||||| || ||||| |||||||||||
Sbjct: 83933 aattctttacaagtgcgtactattacagctcg 83964


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,235,380
Number of Sequences: 3902068
Number of extensions: 6235380
Number of successful extensions: 133308
Number of sequences better than 10.0: 238
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 130547
Number of HSP's gapped (non-prelim): 2679
length of query: 576
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 553
effective length of database: 17,143,297,704
effective search space: 9480243630312
effective search space used: 9480243630312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result