| Clone Name | rbags5h12 |
|---|---|
| Clone Library Name | barley_pub |
>TALA_DICDI (P54633) Filopodin (Talin homolog)| Length = 2492 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = +3 Query: 255 SXSSXATAKGYSSCGRSAPGTSTNLVTPLAPLXASISALDLL-GEFSVDTTKTGTXPSNL 431 S ++ ++ GY + G A + P+ L +++ A DLL GE + TG P N Sbjct: 391 SVANSSSYMGYGAGGGGANQLQPSQQIPITDLKSALRATDLLIGELGGFRSSTGATPQNF 450 Query: 432 ANS 440 S Sbjct: 451 TRS 453
>CADH1_HUMAN (P12830) Epithelial-cadherin precursor (E-cadherin) (Uvomorulin)| (Cadherin-1) (CAM 120/80) (CD324 antigen) [Contains: E-Cad/CTF1; E-Cad/CTF2; E-Cad/CTF3] Length = 882 Score = 29.3 bits (64), Expect = 5.2 Identities = 10/30 (33%), Positives = 18/30 (60%) Frame = -3 Query: 95 ISSWVPHXPEPASDGADVHTYSFNLCKKKM 6 +SSW+ PEP G D +Y+F + ++ + Sbjct: 17 VSSWLCQEPEPCHPGFDAESYTFTVPRRHL 46
>FAHD1_MOUSE (Q8R0F8) Fumarylacetoacetate hydrolase domain-containing protein 1| (EC 3.-.-.-) Length = 227 Score = 28.5 bits (62), Expect = 8.9 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = -2 Query: 300 CRRKNTPWQLXRSXTTSC 247 C++K PW L +S T+SC Sbjct: 115 CKKKGLPWTLAKSFTSSC 132
>2A5D_YEAST (P38903) Serine/threonine-protein phosphatase 2A 56 kDa regulatory| subunit delta isoform (PP2A, B subunit, B' delta isoform) (Protein RTS1) (Protein SCS1) Length = 757 Score = 28.5 bits (62), Expect = 8.9 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 8/84 (9%) Frame = +3 Query: 231 DENDPCRKSXSSXATAKGYSSCGRSAPGTS--------TNLVTPLAPLXASISALDLLGE 386 D+ KS ++ +T+K +S S+ GT+ + T S+ + Sbjct: 26 DKEKEKEKSSTTSSTSKKPASASSSSHGTTHSSASSTGSKSTTEKGKQSGSVPSQGKHHS 85 Query: 387 FSVDTTKTGTXPSNLANSCRNXSL 458 S TKT T PS+ ++S R+ S+ Sbjct: 86 SSTSKTKTATTPSSSSSSSRSSSV 109
>FAHD1_RAT (Q6AYQ8) Fumarylacetoacetate hydrolase domain-containing protein 1| (EC 3.-.-.-) Length = 221 Score = 28.5 bits (62), Expect = 8.9 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = -2 Query: 300 CRRKNTPWQLXRSXTTSC 247 C++K PW L +S T+SC Sbjct: 109 CKKKGLPWTLAKSFTSSC 126 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,627,923 Number of Sequences: 219361 Number of extensions: 1063135 Number of successful extensions: 2578 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2506 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2578 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)