ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags5h04 |
|---|---|
| Clone Library Name | barley_pub |
>SQV8_CAEEL (Q09363) Probable glucuronosyltransferase sqv-8 (EC 2.4.1.135)| (Vulval invagination protein sqv-8) (Squashed vulva protein 8) Length = 356 Score = 38.5 bits (88), Expect = 0.018 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = -2 Query: 567 GLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQLN 445 G QES F+E L ME LA+ CT++ VW+ E P+L+ Sbjct: 291 GYQESTFLENLGIHRYNMEPLAEMCTKVYVWHTRTEKPKLS 331
>B3GA2_CANFA (Q5CAZ6) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 329 Score = 37.0 bits (84), Expect = 0.052 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = -2 Query: 660 GFAFN-STILWDPKRWKNPSIGSIILHSGGRGGLQESRFIERLVEDESQMEGLADNCTRI 484 GFA + IL +PK ++ G + G+QES F++++ E ++E A+NCT++ Sbjct: 252 GFAVSLQVILSNPK--------AVFKRRGSQPGMQESDFLKQITTVE-ELEPKANNCTKV 302 Query: 483 MVWNFDLEPPQL 448 +VW+ E L Sbjct: 303 LVWHTRTEKVNL 314
>B3GA2_HUMAN (Q9NPZ5) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 323 Score = 37.0 bits (84), Expect = 0.052 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = -2 Query: 660 GFAFN-STILWDPKRWKNPSIGSIILHSGGRGGLQESRFIERLVEDESQMEGLADNCTRI 484 GFA + IL +PK ++ G + G+QES F++++ E ++E A+NCT++ Sbjct: 246 GFAVSLQVILSNPK--------AVFKRRGSQPGMQESDFLKQITTVE-ELEPKANNCTKV 296 Query: 483 MVWNFDLEPPQL 448 +VW+ E L Sbjct: 297 LVWHTRTEKVNL 308
>B3GA2_MOUSE (P59270) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 324 Score = 36.6 bits (83), Expect = 0.068 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = -2 Query: 660 GFAFN-STILWDPKRWKNPSIGSIILHSGGRGGLQESRFIERLVEDESQMEGLADNCTRI 484 GFA + IL +PK ++ G + G+QES F++++ E ++E A NCT++ Sbjct: 247 GFAVSLQVILSNPK--------AVFKRRGSQPGMQESDFLKQITTVE-ELEPKASNCTKV 297 Query: 483 MVWNFDLEPPQL 448 +VW+ E L Sbjct: 298 LVWHTRTEKVNL 309
>B3GA1_RAT (O35789) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 334 Score = 35.8 bits (81), Expect = 0.12 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = -2 Query: 579 GGRGGLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 448 G +GG QES + LV + +E A NCT+I+VW+ E P L Sbjct: 277 GVKGGYQESSLLRELVT-LNDLEPKAANCTKILVWHTRTEKPVL 319
>B3GA1_MOUSE (Q9CW73) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 334 Score = 35.8 bits (81), Expect = 0.12 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = -2 Query: 579 GGRGGLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 448 G +GG QES + LV + +E A NCT+I+VW+ E P L Sbjct: 277 GVKGGYQESSLLRELVT-LNDLEPKAANCTKILVWHTRTEKPVL 319
>B3GA1_HUMAN (Q9P2W7) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 334 Score = 35.8 bits (81), Expect = 0.12 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = -2 Query: 579 GGRGGLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 448 G +GG QES + LV + +E A NCT+I+VW+ E P L Sbjct: 277 GVKGGYQESSLLRELVT-LNDLEPKAANCTKILVWHTRTEKPVL 319
>B3GA2_RAT (Q9Z137) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 324 Score = 35.8 bits (81), Expect = 0.12 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = -2 Query: 660 GFAFN-STILWDPKRWKNPSIGSIILHSGGRGGLQESRFIERLVEDESQMEGLADNCTRI 484 GFA + IL +PK ++ G + G+QES F++++ + ++E A+NCT++ Sbjct: 247 GFAVSLQVILSNPK--------AVFKRRGSQPGMQESDFLKQITTVD-ELEPKANNCTKV 297 Query: 483 MVWNFDLEPPQL 448 +VW+ E L Sbjct: 298 LVWHTRTEKVNL 309
>B3GA1_PANTR (Q5CB04) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 332 Score = 35.8 bits (81), Expect = 0.12 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = -2 Query: 579 GGRGGLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 448 G +GG QES + LV + +E A NCT+I+VW+ E P L Sbjct: 275 GVKGGYQESSLLRELVT-LNDLEPKAANCTKILVWHTRTEKPVL 317
>B3GA1_CANFA (Q5CB03) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 335 Score = 35.8 bits (81), Expect = 0.12 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = -2 Query: 579 GGRGGLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 448 G +GG QES + LV + +E A NCT+I+VW+ E P L Sbjct: 278 GVKGGYQESSLLRELVT-LNDLEPKAANCTKILVWHTRTEKPVL 320
>B3GA3_HUMAN (O94766) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 3 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 3) (Glucuronosyltransferase-I) (GlcAT-I) (UDP-GlcUA:Gal beta-1,3-Gal-R glucuronyltransferase) (GlcUAT-I) Length = 335 Score = 32.3 bits (72), Expect = 1.3 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = -2 Query: 567 GLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 448 G ES + LV D +E A NCTR++VW+ E P++ Sbjct: 278 GHLESSLLSHLV-DPKDLEPRAANCTRVLVWHTRTEKPKM 316
>BGAL_STRTR (P23989) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1026 Score = 31.6 bits (70), Expect = 2.2 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -1 Query: 517 NGRPGRQLHPDYGLEFRFGTSSTQLPYWLVAAEE 416 +G+ G P++GLEF G+ T L Y+ AEE Sbjct: 864 DGKAGLPNFPEFGLEFAIGSQFTNLSYYGYGAEE 897
>YC9E_SCHPO (Q09888) Hypothetical protein C584.14 in chromosome III| Length = 431 Score = 30.8 bits (68), Expect = 3.7 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = +1 Query: 466 IEIPDHNPGAIVCQAFHLTLILDKPLNKSRLLQATPAT*MEYNRSYAGVL 615 +E P + + + HL +LDK + K L++ T A+ ME Y V+ Sbjct: 274 MEFETSQPSSSISEIIHLLAVLDKRIPKKTLVEKTYASSMELQELYNAVV 323
>B3GA3_MOUSE (P58158) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 3 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 3) (Glucuronosyltransferase-I) (GlcAT-I) (UDP-GlcUA:Gal Beta-1,3-Gal-R glucuronyltransferase) (GlcUAT-I) Length = 335 Score = 30.8 bits (68), Expect = 3.7 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -2 Query: 567 GLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 448 G ES + LV D +E A NCT+++VW+ E P++ Sbjct: 278 GHLESSLLSHLV-DPKDLEPRAANCTQVLVWHTRTEKPKM 316
>B3GA3_CRIGR (Q9WU47) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 3 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 3) (Glucuronosyltransferase-I) (GlcAT-I) (UDP-GlcUA:Gal Beta-1,3-Gal-R glucuronyltransferase) (GlcUAT-I) Length = 335 Score = 30.8 bits (68), Expect = 3.7 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -2 Query: 567 GLQESRFIERLVEDESQMEGLADNCTRIMVWNFDLEPPQL 448 G ES + LV D +E A NCT+++VW+ E P++ Sbjct: 278 GHLESSLLSHLV-DPKDLEPRAANCTQVLVWHTRTEKPKM 316
>AKA11_HUMAN (Q9UKA4) A-kinase anchor protein 11 (Protein kinase A-anchoring| protein 11) (PRKA11) (A kinase anchor protein 220 kDa) (AKAP 220) (hAKAP220) Length = 1901 Score = 30.4 bits (67), Expect = 4.9 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%) Frame = -2 Query: 531 EDESQMEGLADNCTRIMVWNFDLEP----PQLNYPTGWLLQKNLDAT*LSWCPIFLFAHT 364 E E ++EGL + +++ N D+EP PQL WL+ + L+ H Sbjct: 1795 EHEDEVEGLGQDGKTLLITNIDMEPCTVDPQLRIILQWLIASEAEVA-------ELYFHD 1847 Query: 363 SAIDGFLNL 337 SA F+ L Sbjct: 1848 SANKEFMLL 1856 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,884,777 Number of Sequences: 219361 Number of extensions: 1611841 Number of successful extensions: 3865 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 3785 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3865 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
