| Clone Name | rbags5h04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ567372.1|HVU567372 Hordeum vulgare mRNA for putative 3-beta-glucuronosyltransferase (pglcat6 gene), clone 3 Length = 1831 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Minus Query: 239 gttttcttttgtcaggcttcttttttgaacttttactagcgtgacattattccgaatcag 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1254 gttttcttttgtcaggcttcttttttgaacttttactagcgtgacattattccgaatcag 1195 Query: 299 gccttggcagggcagcttcgcatgatcctggatgctaccaagttcaggaagccatcaatt 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1194 gccttggcagggcagcttcgcatgatcctggatgctaccaagttcaggaagccatcaatt 1135 Query: 359 gcactagtatgagcaaacaaaaagatggggcaccaagacagctacgtagcatctaggttc 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1134 gcactagtatgagcaaacaaaaagatggggcaccaagacagctacgtagcatctaggttc 1075 Query: 419 ttctgcagcaaccagccagtagggtaattgagttgaggaggttccaaatcgaaattccag 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1074 ttctgcagcaaccagccagtagggtaattgagttgaggaggttccaaatcgaaattccag 1015 Query: 479 accataatccgggtgcaattgtctgccaggccttccatttgactctcatcctcgacaagc 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1014 accataatccgggtgcaattgtctgccaggccttccatttgactctcatcctcgacaagc 955 Query: 539 ctctcaataaatctcgactcctgcaagccacccctgccacctgaatggagtataatagat 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 954 ctctcaataaatctcgactcctgcaagccacccctgccacctgaatggagtataatagat 895 Query: 599 cctatgctggggttcttccatctcttaggatcccaaagtatagtgctgttaaaagcaaat 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 894 cctatgctggggttcttccatctcttaggatcccaaagtatagtgctgttaaaagcaaat 835 Query: 659 cca 661 ||| Sbjct: 834 cca 832 Score = 394 bits (199), Expect = e-106 Identities = 201/202 (99%) Strand = Plus / Minus Query: 1 aatctgtgattttgcttttgcttttgttnggtatcaagagtacatatctatctgtcaaca 60 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1492 aatctgtgattttgcttttgcttttgttcggtatcaagagtacatatctatctgtcaaca 1433 Query: 61 ggtgttgcaatggagacaaacttttacatctgtaaggtgatatatgcatgtataataacg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1432 ggtgttgcaatggagacaaacttttacatctgtaaggtgatatatgcatgtataataacg 1373 Query: 121 aacccaaacaaagaaaggtaaatatacagggctaaatctagctggatgaatatgagtgaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1372 aacccaaacaaagaaaggtaaatatacagggctaaatctagctggatgaatatgagtgaa 1313 Query: 181 aaatcaacttagaaaagaatgc 202 |||||||||||||||||||||| Sbjct: 1312 aaatcaacttagaaaagaatgc 1291
>emb|AJ969052.1| Triticum aestivum partial mRNA for glycosyltransferase (pglcat6 gene) Length = 1476 Score = 589 bits (297), Expect = e-165 Identities = 395/424 (93%), Gaps = 4/424 (0%) Strand = Plus / Minus Query: 242 ttcttttgtcaggcttcttt-tttgaactttt-actagcgtgacattattccgaatcagg 299 |||||||||||||||||||| ||||||||||| ||| | ||||||||||| |||||||| Sbjct: 1236 ttcttttgtcaggcttctttctttgaactttttactggtgtgacattattttgaatcagg 1177 Query: 300 ccttggcaggg--cagcttcgcatgatcctggatgctaccaagttcaggaagccatcaat 357 |||||||||| ||||||||| ||||||||| ||| |||||||||||||| | ||| | Sbjct: 1176 tcttggcagggagcagcttcgcgtgatcctgggcgctgccaagttcaggaaggcgtcact 1117 Query: 358 tgcactagtatgagcaaacaaaaagatggggcaccaagacagctacgtagcatctaggtt 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1116 cacactagtatgagcaaacaaaaagatggggcaccaagacagctacgtagcatctaggtt 1057 Query: 418 cttctgcagcaaccagccagtagggtaattgagttgaggaggttccaaatcgaaattcca 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 cttctgcagcaaccagccagtagggtaattgagttgaggaggttccaaatcgaaattcca 997 Query: 478 gaccataatccgggtgcaattgtctgccaggccttccatttgactctcatcctcgacaag 537 |||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 996 aaccataatacgggtgcaattgtctgctaggccttccatttgactctcgtcctcgacaag 937 Query: 538 cctctcaataaatctcgactcctgcaagccacccctgccacctgaatggagtataataga 597 ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 936 cctctcaataaatcttgactcttgcaagccaccccttccacctgaatggagtataataga 877 Query: 598 tcctatgctggggttcttccatctcttaggatcccaaagtatagtgctgttaaaagcaaa 657 |||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 876 ccctacggtggggctcttccatctcttaggatcccaaagtatagtgctgttaaaagcaaa 817 Query: 658 tcca 661 |||| Sbjct: 816 tcca 813 Score = 151 bits (76), Expect = 3e-33 Identities = 142/161 (88%), Gaps = 6/161 (3%) Strand = Plus / Minus Query: 44 atatctatctgtcaacaggtgttgcaatggagacaaacttttacatctgtaaggtgatat 103 ||||||||||||||| || |||||| || ||||||||| ||||||||||||||||| Sbjct: 1412 atatctatctgtcaagag---ttgcaacggtgacaaacttccgcatctgtaaggtgatat 1356 Query: 104 atgcatgtataataacgaacccaaacaaagaaag-gtaaatatac--agggctaaatcta 160 ||||||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||||| Sbjct: 1355 atgcatgtataataacgaaccgaaacagagaaagagtaaatatacagagggctagatcta 1296 Query: 161 gctggatgaatatgagtgaaaaatcaacttagaaaagaatg 201 ||||||||||||||||||| |||| || || |||||||||| Sbjct: 1295 gctggatgaatatgagtgagaaatgaaatttgaaaagaatg 1255 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tgattttgcttttgcttttg 26 |||||||||||||||||||| Sbjct: 1458 tgattttgcttttgcttttg 1439
>emb|AJ969051.1| Saccharum officinarum mRNA for glycosyltransferase (pglcat6 gene) Length = 1717 Score = 293 bits (148), Expect = 4e-76 Identities = 223/248 (89%) Strand = Plus / Minus Query: 410 tctaggttcttctgcagcaaccagccagtagggtaattgagttgaggaggttccaaatcg 469 ||||||||||||||||||| |||||||||||||||||| | || ||||||||||| ||| Sbjct: 1325 tctaggttcttctgcagcagccagccagtagggtaattcaactgtggaggttccaagtcg 1266 Query: 470 aaattccagaccataatccgggtgcaattgtctgccaggccttccatttgactctcatcc 529 |||||||||||||||| ||| ||||| |||||||| ||||||||||||||| |||| ||| Sbjct: 1265 aaattccagaccataacccgagtgcagttgtctgcgaggccttccatttgagtctcgtcc 1206 Query: 530 tcgacaagcctctcaataaatctcgactcctgcaagccacccctgccacctgaatggagt 589 ||||||||| ||||||| ||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 1205 tcgacaagcttctcaatgaatcttgactcctgcaagccacctctgccacctgaatggagt 1146 Query: 590 ataatagatcctatgctggggttcttccatctcttaggatcccaaagtatagtgctgtta 649 |||||||| ||| ||||| | |||||||||| |||||||||||||||||||||||| Sbjct: 1145 ataatagactctaaagtggggctgttccatctctggggatcccaaagtatagtgctgtta 1086 Query: 650 aaagcaaa 657 |||||||| Sbjct: 1085 aaagcaaa 1078 Score = 87.7 bits (44), Expect = 4e-14 Identities = 63/68 (92%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 282 acattattccgaatcaggccttggcagggcagcttcgcatgatcctggatgctaccaagt 341 ||||||||| ||| |||| |||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1475 acattattc-gaaccaggtcttggcagagcagcttcgcatgatcctggacgctaccaagt 1417 Query: 342 tcaggaag 349 |||||||| Sbjct: 1416 tcaggaag 1409
>dbj|AK069674.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027J07, full insert sequence Length = 2241 Score = 254 bits (128), Expect = 3e-64 Identities = 224/256 (87%) Strand = Plus / Minus Query: 406 agcatctaggttcttctgcagcaaccagccagtagggtaattgagttgaggaggttccaa 465 |||||| || ||| ||||||||| ||||||| | ||||| |||| |||||||||||||| Sbjct: 1855 agcatccagattcctctgcagcagccagccaattgggtagttgacttgaggaggttccag 1796 Query: 466 atcgaaattccagaccataatccgggtgcaattgtctgccaggccttccatttgactctc 525 ||||||||||||||||||| || |||||||| || | |||||||||||||||||||| Sbjct: 1795 ttcgaaattccagaccataacacgagtgcaattatccccaaggccttccatttgactctc 1736 Query: 526 atcctcgacaagcctctcaataaatctcgactcctgcaagccacccctgccacctgaatg 585 ||||| |||||| |||| |||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1735 gtcctcaacaagcttctcgataaatcttgactcctgcaagccacctctgccacctgaatg 1676 Query: 586 gagtataatagatcctatgctggggttcttccatctcttaggatcccaaagtatagtgct 645 || ||||||||| ||| ||||| | |||||||||| ||||||||||||||||||||| Sbjct: 1675 gactataatagactctaaagtggggctgttccatctctgaggatcccaaagtatagtgct 1616 Query: 646 gttaaaagcaaatcca 661 |||||||||||||||| Sbjct: 1615 gttaaaagcaaatcca 1600 Score = 91.7 bits (46), Expect = 3e-15 Identities = 123/145 (84%), Gaps = 4/145 (2%) Strand = Plus / Minus Query: 241 tttcttttgtcaggcttctt--ttttgaacttttactagcgtgacattattccgaatcag 298 ||||||||||||||||||| |||| |||| ||||||| |||||||||| || ||| Sbjct: 2031 tttcttttgtcaggcttctcacttttcaactgttactagtatgacattatttggac-cag 1973 Query: 299 gccttggcagggcagcttcgcatgatcctggatgctaccaagttcaggaagccatcaatt 358 |||||||| |||||||| |||||||||||| |||||||||||||||||| ||||| | Sbjct: 1972 atcttggcagagcagcttctcatgatcctggacgctaccaagttcaggaaggcatcattc 1913 Query: 359 gcactagtatgagcaaacaaaaaga 383 |||||| ||| ||||||||||||| Sbjct: 1912 acactaggatg-gcaaacaaaaaga 1889 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 140 aaatatacagggctaaatctagctggatgaatatg 174 |||| |||| ||||| ||||||||||||||||||| Sbjct: 2111 aaatgtacatggctatatctagctggatgaatatg 2077
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 135 bits (68), Expect = 2e-28 Identities = 134/156 (85%) Strand = Plus / Plus Query: 406 agcatctaggttcttctgcagcaaccagccagtagggtaattgagttgaggaggttccaa 465 |||||| || ||| ||||||||| ||||||| | ||||| |||| |||||||||||||| Sbjct: 27751448 agcatccagattcctctgcagcagccagccaattgggtagttgacttgaggaggttccag 27751507 Query: 466 atcgaaattccagaccataatccgggtgcaattgtctgccaggccttccatttgactctc 525 ||||||||||||||||||| || |||||||| || | |||||||||||||||||||| Sbjct: 27751508 ttcgaaattccagaccataacacgagtgcaattatccccaaggccttccatttgactctc 27751567 Query: 526 atcctcgacaagcctctcaataaatctcgactcctg 561 ||||| |||||| |||| |||||||| |||||||| Sbjct: 27751568 gtcctcaacaagcttctcgataaatcttgactcctg 27751603 Score = 127 bits (64), Expect = 5e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 558 cctgcaagccacccctgccacctgaatggagtataatagatcctatgctggggttcttcc 617 ||||||||||||| |||||||||||||||| ||||||||| ||| ||||| | |||| Sbjct: 27752028 cctgcaagccacctctgccacctgaatggactataatagactctaaagtggggctgttcc 27752087 Query: 618 atctcttaggatcccaaagtatagtgctgttaaaagcaaatcca 661 |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 27752088 atctctgaggatcccaaagtatagtgctgttaaaagcaaatcca 27752131 Score = 91.7 bits (46), Expect = 3e-15 Identities = 123/145 (84%), Gaps = 4/145 (2%) Strand = Plus / Plus Query: 241 tttcttttgtcaggcttctt--ttttgaacttttactagcgtgacattattccgaatcag 298 ||||||||||||||||||| |||| |||| ||||||| |||||||||| || ||| Sbjct: 27751272 tttcttttgtcaggcttctcacttttcaactgttactagtatgacattatttggac-cag 27751330 Query: 299 gccttggcagggcagcttcgcatgatcctggatgctaccaagttcaggaagccatcaatt 358 |||||||| |||||||| |||||||||||| |||||||||||||||||| ||||| | Sbjct: 27751331 atcttggcagagcagcttctcatgatcctggacgctaccaagttcaggaaggcatcattc 27751390 Query: 359 gcactagtatgagcaaacaaaaaga 383 |||||| ||| ||||||||||||| Sbjct: 27751391 acactaggatg-gcaaacaaaaaga 27751414 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 140 aaatatacagggctaaatctagctggatgaatatg 174 |||| |||| ||||| ||||||||||||||||||| Sbjct: 27751192 aaatgtacatggctatatctagctggatgaatatg 27751226
>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 135 bits (68), Expect = 2e-28 Identities = 134/156 (85%) Strand = Plus / Plus Query: 406 agcatctaggttcttctgcagcaaccagccagtagggtaattgagttgaggaggttccaa 465 |||||| || ||| ||||||||| ||||||| | ||||| |||| |||||||||||||| Sbjct: 43503 agcatccagattcctctgcagcagccagccaattgggtagttgacttgaggaggttccag 43562 Query: 466 atcgaaattccagaccataatccgggtgcaattgtctgccaggccttccatttgactctc 525 ||||||||||||||||||| || |||||||| || | |||||||||||||||||||| Sbjct: 43563 ttcgaaattccagaccataacacgagtgcaattatccccaaggccttccatttgactctc 43622 Query: 526 atcctcgacaagcctctcaataaatctcgactcctg 561 ||||| |||||| |||| |||||||| |||||||| Sbjct: 43623 gtcctcaacaagcttctcgataaatcttgactcctg 43658 Score = 127 bits (64), Expect = 5e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 558 cctgcaagccacccctgccacctgaatggagtataatagatcctatgctggggttcttcc 617 ||||||||||||| |||||||||||||||| ||||||||| ||| ||||| | |||| Sbjct: 44083 cctgcaagccacctctgccacctgaatggactataatagactctaaagtggggctgttcc 44142 Query: 618 atctcttaggatcccaaagtatagtgctgttaaaagcaaatcca 661 |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 44143 atctctgaggatcccaaagtatagtgctgttaaaagcaaatcca 44186 Score = 91.7 bits (46), Expect = 3e-15 Identities = 123/145 (84%), Gaps = 4/145 (2%) Strand = Plus / Plus Query: 241 tttcttttgtcaggcttctt--ttttgaacttttactagcgtgacattattccgaatcag 298 ||||||||||||||||||| |||| |||| ||||||| |||||||||| || ||| Sbjct: 43327 tttcttttgtcaggcttctcacttttcaactgttactagtatgacattatttggac-cag 43385 Query: 299 gccttggcagggcagcttcgcatgatcctggatgctaccaagttcaggaagccatcaatt 358 |||||||| |||||||| |||||||||||| |||||||||||||||||| ||||| | Sbjct: 43386 atcttggcagagcagcttctcatgatcctggacgctaccaagttcaggaaggcatcattc 43445 Query: 359 gcactagtatgagcaaacaaaaaga 383 |||||| ||| ||||||||||||| Sbjct: 43446 acactaggatg-gcaaacaaaaaga 43469 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 140 aaatatacagggctaaatctagctggatgaatatg 174 |||| |||| ||||| ||||||||||||||||||| Sbjct: 43247 aaatgtacatggctatatctagctggatgaatatg 43281
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 135 bits (68), Expect = 2e-28 Identities = 134/156 (85%) Strand = Plus / Plus Query: 406 agcatctaggttcttctgcagcaaccagccagtagggtaattgagttgaggaggttccaa 465 |||||| || ||| ||||||||| ||||||| | ||||| |||| |||||||||||||| Sbjct: 160014 agcatccagattcctctgcagcagccagccaattgggtagttgacttgaggaggttccag 160073 Query: 466 atcgaaattccagaccataatccgggtgcaattgtctgccaggccttccatttgactctc 525 ||||||||||||||||||| || |||||||| || | |||||||||||||||||||| Sbjct: 160074 ttcgaaattccagaccataacacgagtgcaattatccccaaggccttccatttgactctc 160133 Query: 526 atcctcgacaagcctctcaataaatctcgactcctg 561 ||||| |||||| |||| |||||||| |||||||| Sbjct: 160134 gtcctcaacaagcttctcgataaatcttgactcctg 160169 Score = 127 bits (64), Expect = 5e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 558 cctgcaagccacccctgccacctgaatggagtataatagatcctatgctggggttcttcc 617 ||||||||||||| |||||||||||||||| ||||||||| ||| ||||| | |||| Sbjct: 160594 cctgcaagccacctctgccacctgaatggactataatagactctaaagtggggctgttcc 160653 Query: 618 atctcttaggatcccaaagtatagtgctgttaaaagcaaatcca 661 |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 160654 atctctgaggatcccaaagtatagtgctgttaaaagcaaatcca 160697 Score = 91.7 bits (46), Expect = 3e-15 Identities = 123/145 (84%), Gaps = 4/145 (2%) Strand = Plus / Plus Query: 241 tttcttttgtcaggcttctt--ttttgaacttttactagcgtgacattattccgaatcag 298 ||||||||||||||||||| |||| |||| ||||||| |||||||||| || ||| Sbjct: 159838 tttcttttgtcaggcttctcacttttcaactgttactagtatgacattatttggac-cag 159896 Query: 299 gccttggcagggcagcttcgcatgatcctggatgctaccaagttcaggaagccatcaatt 358 |||||||| |||||||| |||||||||||| |||||||||||||||||| ||||| | Sbjct: 159897 atcttggcagagcagcttctcatgatcctggacgctaccaagttcaggaaggcatcattc 159956 Query: 359 gcactagtatgagcaaacaaaaaga 383 |||||| ||| ||||||||||||| Sbjct: 159957 acactaggatg-gcaaacaaaaaga 159980 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 140 aaatatacagggctaaatctagctggatgaatatg 174 |||| |||| ||||| ||||||||||||||||||| Sbjct: 159758 aaatgtacatggctatatctagctggatgaatatg 159792
>ref|NM_191999.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1365 Score = 131 bits (66), Expect = 3e-27 Identities = 132/154 (85%) Strand = Plus / Minus Query: 406 agcatctaggttcttctgcagcaaccagccagtagggtaattgagttgaggaggttccaa 465 |||||| || ||| ||||||||| ||||||| | ||||| |||| |||||||||||||| Sbjct: 1347 agcatccagattcctctgcagcagccagccaattgggtagttgacttgaggaggttccag 1288 Query: 466 atcgaaattccagaccataatccgggtgcaattgtctgccaggccttccatttgactctc 525 ||||||||||||||||||| || |||||||| || | |||||||||||||||||||| Sbjct: 1287 ttcgaaattccagaccataacacgagtgcaattatccccaaggccttccatttgactctc 1228 Query: 526 atcctcgacaagcctctcaataaatctcgactcc 559 ||||| |||||| |||| |||||||| |||||| Sbjct: 1227 gtcctcaacaagcttctcgataaatcttgactcc 1194 Score = 125 bits (63), Expect = 2e-25 Identities = 93/103 (90%) Strand = Plus / Minus Query: 559 ctgcaagccacccctgccacctgaatggagtataatagatcctatgctggggttcttcca 618 |||||||||||| |||||||||||||||| ||||||||| ||| ||||| | ||||| Sbjct: 1170 ctgcaagccacctctgccacctgaatggactataatagactctaaagtggggctgttcca 1111 Query: 619 tctcttaggatcccaaagtatagtgctgttaaaagcaaatcca 661 ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1110 tctctgaggatcccaaagtatagtgctgttaaaagcaaatcca 1068
>dbj|AK062112.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B10, full insert sequence Length = 1436 Score = 129 bits (65), Expect = 1e-26 Identities = 131/153 (85%) Strand = Plus / Minus Query: 406 agcatctaggttcttctgcagcaaccagccagtagggtaattgagttgaggaggttccaa 465 |||||| || ||| ||||||||| ||||||| | ||||| |||| |||||||||||||| Sbjct: 1011 agcatccagattcctctgcagcagccagccaattgggtagttgacttgaggaggttccag 952 Query: 466 atcgaaattccagaccataatccgggtgcaattgtctgccaggccttccatttgactctc 525 ||||||||||||||||||| || |||||||| || | |||||||||||||||||||| Sbjct: 951 ttcgaaattccagaccataacacgagtgcaattatccccaaggccttccatttgactctc 892 Query: 526 atcctcgacaagcctctcaataaatctcgactc 558 ||||| |||||| |||| |||||||| ||||| Sbjct: 891 gtcctcaacaagcttctcgataaatcttgactc 859 Score = 125 bits (63), Expect = 2e-25 Identities = 93/103 (90%) Strand = Plus / Minus Query: 559 ctgcaagccacccctgccacctgaatggagtataatagatcctatgctggggttcttcca 618 |||||||||||| |||||||||||||||| ||||||||| ||| ||||| | ||||| Sbjct: 711 ctgcaagccacctctgccacctgaatggactataatagactctaaagtggggctgttcca 652 Query: 619 tctcttaggatcccaaagtatagtgctgttaaaagcaaatcca 661 ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 651 tctctgaggatcccaaagtatagtgctgttaaaagcaaatcca 609 Score = 91.7 bits (46), Expect = 3e-15 Identities = 123/145 (84%), Gaps = 4/145 (2%) Strand = Plus / Minus Query: 241 tttcttttgtcaggcttctt--ttttgaacttttactagcgtgacattattccgaatcag 298 ||||||||||||||||||| |||| |||| ||||||| |||||||||| || ||| Sbjct: 1187 tttcttttgtcaggcttctcacttttcaactgttactagtatgacattatttggac-cag 1129 Query: 299 gccttggcagggcagcttcgcatgatcctggatgctaccaagttcaggaagccatcaatt 358 |||||||| |||||||| |||||||||||| |||||||||||||||||| ||||| | Sbjct: 1128 atcttggcagagcagcttctcatgatcctggacgctaccaagttcaggaaggcatcattc 1069 Query: 359 gcactagtatgagcaaacaaaaaga 383 |||||| ||| ||||||||||||| Sbjct: 1068 acactaggatg-gcaaacaaaaaga 1045 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 140 aaatatacagggctaaatctagctggatgaatatg 174 |||| |||| ||||| ||||||||||||||||||| Sbjct: 1267 aaatgtacatggctatatctagctggatgaatatg 1233
>dbj|AK068237.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148K06, full insert sequence Length = 2056 Score = 65.9 bits (33), Expect = 2e-07 Identities = 144/181 (79%) Strand = Plus / Minus Query: 407 gcatctaggttcttctgcagcaaccagccagtagggtaattgagttgaggaggttccaaa 466 ||||| |||||||| |||| ||||||||| ||| ||||||| ||||||||||||| Sbjct: 1618 gcatcaaggttcttatgcaatgaccagccaggggggacattgagtagaggaggttccaag 1559 Query: 467 tcgaaattccagaccataatccgggtgcaattgtctgccaggccttccatttgactctca 526 | |||||||| ||||||| || | |||||| |||| || || || || || | |||| Sbjct: 1558 ttaaaattccaaaccataaccctgttgcaatcttctgggagaccctctatctggcgctca 1499 Query: 527 tcctcgacaagcctctcaataaatctcgactcctgcaagccacccctgccacctgaatgg 586 | | |||||| ||||||||||||| ||||||||||| ||||| || |||||||| ||| Sbjct: 1498 tgtttaacaagcttctcaataaatcttgactcctgcaaaccacctcttccacctgagtgg 1439 Query: 587 a 587 | Sbjct: 1438 a 1438
>emb|AJ567371.1|HVU567371 Hordeum vulgare mRNA for putative 3-beta-glucuronosyltransferase (pglcat6 gene), clone 2 Length = 1576 Score = 63.9 bits (32), Expect = 6e-07 Identities = 101/124 (81%) Strand = Plus / Minus Query: 440 gggtaattgagttgaggaggttccaaatcgaaattccagaccataatccgggtgcaattg 499 ||||| ||||| || |||||||||| |||| ||||||||||| | |||| |||| ||| Sbjct: 1100 gggtagttgagctggggaggttccagggcgaagttccagaccatgacccggttgcagttg 1041 Query: 500 tctgccaggccttccatttgactctcatcctcgacaagcctctcaataaatctcgactcc 559 |||| |||||||| ||||||| ||| | || |||||| |||||| ||| | ||||||| Sbjct: 1040 tctggaaggccttctatttgacgctcgttcttaacaagcttctcaacaaaccgcgactcc 981 Query: 560 tgca 563 |||| Sbjct: 980 tgca 977
>ref|NM_102525.2| Arabidopsis thaliana transferase, transferring glycosyl groups AT1G27600 transcript variant AT1G27600.1 mRNA, complete cds Length = 1742 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 623 ttaggatcccaaagtatagtgctgttaaaagcaaatcc 660 ||||| ||||| |||||||||||||||||||||||||| Sbjct: 1170 ttagggtcccagagtatagtgctgttaaaagcaaatcc 1133
>ref|NM_202193.1| Arabidopsis thaliana transferase, transferring glycosyl groups AT1G27600 transcript variant AT1G27600.2 mRNA, complete cds Length = 1637 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 623 ttaggatcccaaagtatagtgctgttaaaagcaaatcc 660 ||||| ||||| |||||||||||||||||||||||||| Sbjct: 1170 ttagggtcccagagtatagtgctgttaaaagcaaatcc 1133
>emb|BX816409.1|CNS0ADDZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH46ZG10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1712 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 623 ttaggatcccaaagtatagtgctgttaaaagcaaatcc 660 ||||| ||||| |||||||||||||||||||||||||| Sbjct: 1170 ttagggtcccagagtatagtgctgttaaaagcaaatcc 1133
>emb|BX817620.1|CNS0ACEY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZA10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 840 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 623 ttaggatcccaaagtatagtgctgttaaaagcaaatcc 660 ||||| ||||| |||||||||||||||||||||||||| Sbjct: 303 ttagggtcccagagtatagtgctgttaaaagcaaatcc 266
>gb|AC012375.3|AC012375 Genomic sequence for Arabidopsis thaliana BAC T22C5 from chromosome I, complete sequence Length = 106753 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 623 ttaggatcccaaagtatagtgctgttaaaagcaaatcc 660 ||||| ||||| |||||||||||||||||||||||||| Sbjct: 16391 ttagggtcccagagtatagtgctgttaaaagcaaatcc 16428
>gb|AY086258.1| Arabidopsis thaliana clone 230979 mRNA, complete sequence Length = 1292 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 623 ttaggatcccaaagtatagtgctgttaaaagcaaatcc 660 ||||| ||||| |||||||||||||||||||||||||| Sbjct: 720 ttagggtcccagagtatagtgctgttaaaagcaaatcc 683
>gb|AC005916.2|T17H3 Arabidopsis thaliana chromosome 1 BAC T17H3 sequence, complete sequence Length = 65839 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 623 ttaggatcccaaagtatagtgctgttaaaagcaaatcc 660 ||||| ||||| |||||||||||||||||||||||||| Sbjct: 48804 ttagggtcccagagtatagtgctgttaaaagcaaatcc 48841
>emb|AJ577239.1|ZMA577239 Zea mays mRNA for putative beta3-glucuronyltransferase, (pglcat6 gene), clone 2 Length = 1394 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 430 ccagccagtagggtaattgagttgaggaggttccaaatcgaaattccagaccataatccg 489 |||||| || ||||| |||| | |||||||||||| | ||||||||||||||||| ||| Sbjct: 987 ccagcctgtggggtagttgactcgaggaggttccaggttgaaattccagaccataacccg 928 Query: 490 ggtgcaattgtc 501 |||||||||| Sbjct: 927 actgcaattgtc 916
>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06, complete sequence Length = 139139 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Minus Query: 407 gcatctaggttcttctgcagcaaccagccagtagggtaattgagttgaggaggttccaaa 466 ||||| |||||||| |||| ||||||||| ||| ||||||| ||||||||||||| Sbjct: 8702 gcatcaaggttcttatgcaatgaccagccaggggggacattgagtagaggaggttccaag 8643 Query: 467 tcgaaattccagaccataatccgggtgcaattgtctgccaggccttccatttgactctca 526 | |||||||| ||||||| || | |||||| |||| || || || || || | |||| Sbjct: 8642 ttaaaattccaaaccataaccctgttgcaatcttctgggagaccctctatctggcgctca 8583 Query: 527 tcctcgacaagcctctcaataaatctcgactcctgcaa 564 | | |||||| ||||||||||||| ||||||||||| Sbjct: 8582 tgtttaacaagcttctcaataaatcttgactcctgcaa 8545
>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14, complete sequence Length = 129292 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Minus Query: 407 gcatctaggttcttctgcagcaaccagccagtagggtaattgagttgaggaggttccaaa 466 ||||| |||||||| |||| ||||||||| ||| ||||||| ||||||||||||| Sbjct: 111420 gcatcaaggttcttatgcaatgaccagccaggggggacattgagtagaggaggttccaag 111361 Query: 467 tcgaaattccagaccataatccgggtgcaattgtctgccaggccttccatttgactctca 526 | |||||||| ||||||| || | |||||| |||| || || || || || | |||| Sbjct: 111360 ttaaaattccaaaccataaccctgttgcaatcttctgggagaccctctatctggcgctca 111301 Query: 527 tcctcgacaagcctctcaataaatctcgactcctgcaa 564 | | |||||| ||||||||||||| ||||||||||| Sbjct: 111300 tgtttaacaagcttctcaataaatcttgactcctgcaa 111263
>emb|AJ577570.1|TAE577570 Triticum aestivum partial mRNA for beta3-glucuronyltransferase (pglcat6 gene) Length = 1503 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 440 gggtaattgagttgaggaggttccaaatcgaaattccagaccataatccgggtgcaattg 499 ||||| ||||| || |||||||||| |||| ||||||||||| | |||| |||| ||| Sbjct: 1005 gggtagttgagctggggaggttccagggcgaagttccagaccatgacccggttgcagttg 946 Query: 500 tctgccaggccttccatttgac 521 |||| |||||||| ||||||| Sbjct: 945 tctggaaggccttctatttgac 924
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Minus Query: 407 gcatctaggttcttctgcagcaaccagccagtagggtaattgagttgaggaggttccaaa 466 ||||| |||||||| |||| ||||||||| ||| ||||||| ||||||||||||| Sbjct: 27644144 gcatcaaggttcttatgcaatgaccagccaggggggacattgagtagaggaggttccaag 27644085 Query: 467 tcgaaattccagaccataatccgggtgcaattgtctgccaggccttccatttgactctca 526 | |||||||| ||||||| || | |||||| |||| || || || || || | |||| Sbjct: 27644084 ttaaaattccaaaccataaccctgttgcaatcttctgggagaccctctatctggcgctca 27644025 Query: 527 tcctcgacaagcctctcaataaatctcgactcctgcaa 564 | | |||||| ||||||||||||| ||||||||||| Sbjct: 27644024 tgtttaacaagcttctcaataaatcttgactcctgcaa 27643987
>gb|DQ481663.1| Takifugu rubripes HoxAa gene cluster, complete sequence Length = 385816 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 tgtgattttgcttttgcttttg 26 |||||||||||||||||||||| Sbjct: 238929 tgtgattttgcttttgcttttg 238950
>emb|AJ971295.1| Saccharum officinarum mRNA for glycosyltransferase (pglcat6 gene) Length = 2259 Score = 44.1 bits (22), Expect = 0.58 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Minus Query: 440 gggtaattgagttga-ggaggttccaaatcgaaattccagaccata 484 ||||| ||||||||| |||||||||| | |||||||||||||||| Sbjct: 1735 gggtagttgagttgaaggaggttccagtttgaaattccagaccata 1690
>emb|AL954374.4| Mouse DNA sequence from clone RP23-445A5 on chromosome 2, complete sequence Length = 87941 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 447 tgagttgaggaggttccaaatc 468 |||||||||||||||||||||| Sbjct: 83910 tgagttgaggaggttccaaatc 83889
>dbj|AK076331.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732438M11 product:E74-like factor 5, full insert sequence Length = 2883 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 447 tgagttgaggaggttccaaatc 468 |||||||||||||||||||||| Sbjct: 2312 tgagttgaggaggttccaaatc 2291
>gb|AC105760.3| Homo sapiens BAC clone RP11-346I14 from 2, complete sequence Length = 77730 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 ggccttggcagggcagcttcgc 319 |||||||||||||||||||||| Sbjct: 26061 ggccttggcagggcagcttcgc 26040
>emb|CR812896.13| Zebrafish DNA sequence from clone DKEY-30K5 in linkage group 14, complete sequence Length = 207425 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 gaacccaaacaaagaaaggta 140 ||||||||||||||||||||| Sbjct: 192376 gaacccaaacaaagaaaggta 192396
>gb|AC124703.3| Mus musculus BAC clone RP24-261G23 from chromosome 5, complete sequence Length = 183906 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 aacgaacccaaacaaagaaag 137 ||||||||||||||||||||| Sbjct: 27587 aacgaacccaaacaaagaaag 27567
>emb|AL354942.10| Human DNA sequence from clone RP11-57O22 on chromosome 6 Contains part of the gene for a novel protein (FLJ32724) and a CpG island, complete sequence Length = 198217 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 364 agtatgagcaaacaaaaagat 384 ||||||||||||||||||||| Sbjct: 146045 agtatgagcaaacaaaaagat 146025
>emb|AL137852.15| Human DNA sequence from clone RP11-131A5 on chromosome 9q32-34.11 Contains the RAD23B gene for RA23B homolog B (S. cerevisiae) and three CpG islands, complete sequence Length = 162509 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 617 catctcttaggatcccaaagt 637 ||||||||||||||||||||| Sbjct: 22097 catctcttaggatcccaaagt 22077
>emb|AL121674.12|HSDJ540H1 Human DNA sequence from clone RP4-540H1 on chromosome 20 Contains part of the CHD6 gene for chromodomain helicase DNA binding protein 6, complete sequence Length = 39079 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 gattttgcttttgcttttgtt 28 ||||||||||||||||||||| Sbjct: 13735 gattttgcttttgcttttgtt 13715
>gb|AC096645.2| Homo sapiens chromosome 1 clone RP11-450D21, complete sequence Length = 167878 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 tgaaaaatcaacttagaaaag 197 ||||||||||||||||||||| Sbjct: 121723 tgaaaaatcaacttagaaaag 121743
>gb|AC119037.6| Homo sapiens 3 BAC RP11-495D2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 200182 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 gattttgcttttgcttttgtt 28 ||||||||||||||||||||| Sbjct: 97310 gattttgcttttgcttttgtt 97330
>gb|AC117426.3| Homo sapiens 3 BAC RP11-130C13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150601 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 gattttgcttttgcttttgtt 28 ||||||||||||||||||||| Sbjct: 148972 gattttgcttttgcttttgtt 148952
>gb|AC018757.6| Homo sapiens chromosome 5 clone CTB-45J8, complete sequence Length = 186418 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 tgtgattttgcttttgctttt 25 ||||||||||||||||||||| Sbjct: 2586 tgtgattttgcttttgctttt 2606
>gb|AC024587.5| Homo sapiens chromosome 5 clone RP11-252I13, complete sequence Length = 178492 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 tcttttgtcaggcttcttttt 263 ||||||||||||||||||||| Sbjct: 55926 tcttttgtcaggcttcttttt 55946
>gb|AC008586.6|AC008586 Homo sapiens chromosome 5 clone CTC-568N24, complete sequence Length = 133691 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 tcttttgtcaggcttcttttt 263 ||||||||||||||||||||| Sbjct: 8817 tcttttgtcaggcttcttttt 8797
>gb|AC008675.5|AC008675 Homo sapiens chromosome 5 clone CTB-45I8, complete sequence Length = 186415 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 tgtgattttgcttttgctttt 25 ||||||||||||||||||||| Sbjct: 183830 tgtgattttgcttttgctttt 183810
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgattttgcttttgcttttg 26 |||||||||||||||||||| Sbjct: 356038 tgattttgcttttgcttttg 356057
>gb|AC084046.13| Trypanosoma brucei chromosome 6 clone RPCI93-3D8, complete sequence Length = 154240 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgattttgcttttgcttttg 26 |||||||||||||||||||| Sbjct: 149185 tgattttgcttttgcttttg 149204
>gb|AC073906.6| Trypanosoma brucei chromosome 6 clone RPCI93-3A7, complete sequence Length = 175357 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgattttgcttttgcttttg 26 |||||||||||||||||||| Sbjct: 7854 tgattttgcttttgcttttg 7873
>gb|AC164613.3| Mus musculus BAC clone RP23-324B8 from chromosome 13, complete sequence Length = 197469 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 tacatatctatctgtcaacaggtg 64 ||||||| |||||||||||||||| Sbjct: 55297 tacatatttatctgtcaacaggtg 55274
>gb|AC097023.6| Rattus norvegicus BAC CH230-35L12 (Children's Hospital Oakland Research Institute) complete sequence Length = 228433 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gcttcttttttgaactttta 273 |||||||||||||||||||| Sbjct: 194136 gcttcttttttgaactttta 194117
>gb|AY518691.1| Rattus norvegicus Evf1 mRNA, complete sequence Length = 2704 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 atgagtgaaaaatcaactta 191 |||||||||||||||||||| Sbjct: 2629 atgagtgaaaaatcaactta 2648
>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on chromosome 19 Length = 413528 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 atctgtgattttgcttttgctttt 25 ||||||| |||||||||||||||| Sbjct: 137702 atctgtggttttgcttttgctttt 137679
>gb|AC110901.16| Mus musculus chromosome 13, clone RP24-165P9, complete sequence Length = 179128 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 tacatatctatctgtcaacaggtg 64 ||||||| |||||||||||||||| Sbjct: 27719 tacatatttatctgtcaacaggtg 27742
>gb|AC140294.3| Mus musculus BAC clone RP23-359G16 from chromosome 19, complete sequence Length = 190551 Score = 40.1 bits (20), Expect = 9.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 10 ttttgcttttgcttttgttnggt 32 ||||||||||||||||||| ||| Sbjct: 52072 ttttgcttttgcttttgtttggt 52094
>gb|AC092830.7| Homo sapiens 12 BAC RP11-146L7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164969 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 119571 attttgcttttgcttttgtt 119590
>gb|AC124698.4| Mus musculus BAC clone RP24-180F7 from chromosome 3, complete sequence Length = 164187 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 104639 attttgcttttgcttttgtt 104658
>emb|AL603755.4| Human DNA sequence from clone RP11-136G2 on chromosome 6, complete sequence Length = 167565 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 53112 attttgcttttgcttttgtt 53093
>emb|AL445250.4| Human DNA sequence from clone RP11-199A24 on chromosome 6 Contains a CpG island, complete sequence Length = 178384 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 14929 attttgcttttgcttttgtt 14948
>emb|AL137245.11| Human DNA sequence from clone RP11-196I2 on chromosome 13 Contains a novel gene, complete sequence Length = 146994 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgattttgcttttgcttttg 26 |||||||||||||||||||| Sbjct: 109464 tgattttgcttttgcttttg 109483
>gb|AC087880.24| Homo sapiens 12q BAC RP11-121J20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188361 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 18325 attttgcttttgcttttgtt 18306
>emb|AL035089.21|HS1030M6 Human DNA sequence from clone RP5-1030M6 on chromosome 20q12-13.2 Contains the 5' end of the C20orf100 gene for a novel HMG (high mobility group) box protein similar to KIAA0808, two novel genes and two CpG islands, complete sequence Length = 173804 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 aaaatcaacttagaaaagaa 199 |||||||||||||||||||| Sbjct: 11833 aaaatcaacttagaaaagaa 11852
>emb|AJ969046.2| Medicago truncatula mRNA for beta-1,3-glucuronosyltransferase (pglcat1 gene) Length = 1696 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 ccttccatttgactctcatc 528 |||||||||||||||||||| Sbjct: 1432 ccttccatttgactctcatc 1413
>emb|X03931.1|MSGLNAG Medicago sativa L. glutamine synthetase gene Length = 4464 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 gtgattttgcttttgctttt 25 |||||||||||||||||||| Sbjct: 1618 gtgattttgcttttgctttt 1637
>emb|AL023287.1|SPBC23E6 S.pombe chromosome II cosmid c23E6 Length = 34486 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 26272 attttgcttttgcttttgtt 26291
>gb|AC162922.4| Mus musculus BAC clone RP23-314M6 from chromosome 3, complete sequence Length = 245207 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 78282 attttgcttttgcttttgtt 78301
>emb|BX546485.12| Zebrafish DNA sequence from clone RP71-39A17 in linkage group 18, complete sequence Length = 153332 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 tgaaaaatcaacttagaaaa 196 |||||||||||||||||||| Sbjct: 133161 tgaaaaatcaacttagaaaa 133142
>emb|BX649451.4| Zebrafish DNA sequence from clone DKEY-206M7 in linkage group 10, complete sequence Length = 97299 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 caggcttcttttttgaactt 270 |||||||||||||||||||| Sbjct: 13351 caggcttcttttttgaactt 13332
>gb|AC182766.4| Pan troglodytes BAC clone CH251-433B9 from chromosome 6, complete sequence Length = 173138 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 34071 attttgcttttgcttttgtt 34090
>gb|AC087892.16| Homo sapiens 12q BAC RP11-3L23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 123004 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 67846 attttgcttttgcttttgtt 67827
>gb|AC112212.2| Homo sapiens chromosome 3 clone RP11-185E15, complete sequence Length = 168752 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 30555 attttgcttttgcttttgtt 30574
>gb|DP000057.1| Dasypus novemcinctus target 117 genomic scaffold Length = 444202 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 tgaaaaatcaacttagaaaa 196 |||||||||||||||||||| Sbjct: 244327 tgaaaaatcaacttagaaaa 244308
>gb|AC006161.3| Arabidopsis thaliana chromosome 2 clone T14A4 map mi310, complete sequence Length = 99761 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgattttgcttttgcttttg 26 |||||||||||||||||||| Sbjct: 38931 tgattttgcttttgcttttg 38950
>dbj|AK162361.1| Mus musculus adult male epididymis cDNA, RIKEN full-length enriched library, clone:9230022I15 product:unclassifiable, full insert sequence Length = 2173 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 1979 attttgcttttgcttttgtt 1998
>gb|AC153363.4| Mus musculus BAC clone RP23-5I6 from chromosome 9, complete sequence Length = 185444 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 147701 attttgcttttgcttttgtt 147720
>gb|AC155817.2| Mus musculus BAC clone RP23-473M8 from chromosome 12, complete sequence Length = 159497 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 108675 attttgcttttgcttttgtt 108694
>gb|AC008537.5|AC008537 Homo sapiens chromosome 19 clone CTC-490E21, complete sequence Length = 169089 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 atctgtgattttgcttttgctttt 25 ||||||| |||||||||||||||| Sbjct: 158702 atctgtggttttgcttttgctttt 158679
>gb|AC173966.1| Mus musculus BAC clone RP23-159L16 from chromosome 14, complete sequence Length = 188342 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 96671 attttgcttttgcttttgtt 96690
>gb|AC167420.1| Mus musculus BAC clone RP23-239F23 from chromosome 12, complete sequence Length = 185684 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 47470 attttgcttttgcttttgtt 47489
>emb|BX005450.9| Zebrafish DNA sequence from clone CH211-150O23, complete sequence Length = 164218 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 aaacaaagaaaggtaaatat 145 |||||||||||||||||||| Sbjct: 147585 aaacaaagaaaggtaaatat 147566
>emb|AL845481.5| Zebrafish DNA sequence from clone DKEY-46N18 in linkage group 17, complete sequence Length = 237313 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 tgtgattttgcttttgcttttgtt 28 ||||||||| |||||||||||||| Sbjct: 188906 tgtgattttacttttgcttttgtt 188883
>emb|CT030740.8| Mouse DNA sequence from clone RP24-312D7 on chromosome 17, complete sequence Length = 215154 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 tgtgattttgcttttgcttttgtt 28 |||| ||||||||||||||||||| Sbjct: 124804 tgtgtttttgcttttgcttttgtt 124781
>emb|Y08971.1|HTPHI0EX1 H.tubulosa phi-0 gene, exon 1 (and joined CDS) Length = 780 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 caaacaaagaaaggtaaata 144 |||||||||||||||||||| Sbjct: 745 caaacaaagaaaggtaaata 764
>emb|AL954371.6| Zebrafish DNA sequence from clone CH211-207O15, complete sequence Length = 124954 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 aaacaaagaaaggtaaatat 145 |||||||||||||||||||| Sbjct: 73715 aaacaaagaaaggtaaatat 73696
>gb|AC126669.4| Mus musculus BAC clone RP24-457D15 from 9, complete sequence Length = 180081 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 68781 attttgcttttgcttttgtt 68800
>emb|AL929328.8| Mouse DNA sequence from clone RP23-332P16 on chromosome X, complete sequence Length = 74182 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 gccatcaattgcactagtat 368 |||||||||||||||||||| Sbjct: 45362 gccatcaattgcactagtat 45343
>gb|AC087556.30| Mus musculus strain C57BL/6J chromosome 16 clone rp23-123l9, complete sequence Length = 219730 Score = 40.1 bits (20), Expect = 9.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 10 ttttgcttttgcttttgttnggt 32 ||||||||||||||||||| ||| Sbjct: 164997 ttttgcttttgcttttgtttggt 165019
>gb|AC167013.4| Mus musculus BAC clone RP23-262F9 from chromosome 14, complete sequence Length = 236791 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 154946 attttgcttttgcttttgtt 154927
>gb|AC156790.2| Mus musculus BAC clone RP24-359N3 from chromosome 14, complete sequence Length = 233946 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 12085 attttgcttttgcttttgtt 12066
>emb|AL591584.14| Mouse DNA sequence from clone RP23-335N12 on chromosome 2, complete sequence Length = 177754 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 aaaatcaacttagaaaagaa 199 |||||||||||||||||||| Sbjct: 145600 aaaatcaacttagaaaagaa 145619
>emb|AL671335.12| Mouse DNA sequence from clone RP23-130J1 on chromosome X, complete sequence Length = 175336 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 cttcttttttgaacttttac 274 |||||||||||||||||||| Sbjct: 135335 cttcttttttgaacttttac 135354
>gb|AC135851.1| Homo sapiens chromosome 3 clone RP11-152N21, complete sequence Length = 157652 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 attttgcttttgcttttgtt 28 |||||||||||||||||||| Sbjct: 39239 attttgcttttgcttttgtt 39220 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,597,694 Number of Sequences: 3902068 Number of extensions: 6597694 Number of successful extensions: 143127 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 142787 Number of HSP's gapped (non-prelim): 330 length of query: 661 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 638 effective length of database: 17,143,297,704 effective search space: 10937423935152 effective search space used: 10937423935152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)