| Clone Name | rbags5g15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|D26105.1|BLYHEMH1 Barley mRNA for ferrochelatase Length = 1728 Score = 785 bits (396), Expect = 0.0 Identities = 426/441 (96%) Strand = Plus / Minus Query: 7 caccaaaatggttaaccacgttgcatcgataaaaataagcagctcactgaagagtgttcc 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1588 caccaaaatggttaaccacgttgcatcgataaaaataagcagctcactgaagagtgttcc 1529 Query: 67 ggaaagcagaaactagcctcggcgataacagcaggaagaaggccaggaccgagcccaaga 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1528 ggaaagcagaaactagcctcggcgataacagcaggaagaaggccaggaccgagcccaaga 1469 Query: 127 acatcttggtcagataatgcatcatgtccatgtcagagtcagtatccttgacctttctgg 186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1468 acatcttggtcagataatgcatcatgtccatgtcagagtcagtatccttgacctttctgg 1409 Query: 187 tcgccatcgcggaggcagagggaagggcnnnnnnnacagcgtcagcgaggtccgagatga 246 |||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1408 tcgccatcgcggaggcagagggaagggcttcgacgacagcgtcagcgaggtccgagatga 1349 Query: 247 aggatgaggtgcatccaagagctggaaccctcccccagttctcaatgcccgactctagag 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1348 aggatgaggtgcatccaagagctggaaccctcccccagttctcaatgcccgactctagag 1289 Query: 307 ccaactccctgtactccatgtcgatttcttccagtgtctcaatatgctcgctcacaaagc 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1288 ccaactccctgtactccatgtcgatttcttccagtgtctcaatatgctcgctcacaaagc 1229 Query: 367 ttactgggacagccanganactcttaacacccttttnaccaanttcaactaaaacttnat 426 ||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||| || Sbjct: 1228 ttactgggacagccaggagactcttaacacccttttgaccaagttcaactaaaacttcat 1169 Query: 427 cantntatggcttaanccatt 447 || | |||||||||| ||||| Sbjct: 1168 cagtatatggcttaagccatt 1148
>gb|AF020791.1|AF020791 Hordeum vulgare ferrochelatase (hemH) gene, complete cds Length = 7694 Score = 674 bits (340), Expect = 0.0 Identities = 354/361 (98%) Strand = Plus / Minus Query: 7 caccaaaatggttaaccacgttgcatcgataaaaataagcagctcactgaagagtgttcc 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6855 caccaaaatggttaaccacgttgcatcgataaaaataagcagctcactgaagagtgttcc 6796 Query: 67 ggaaagcagaaactagcctcggcgataacagcaggaagaaggccaggaccgagcccaaga 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6795 ggaaagcagaaactagcctcggcgataacagcaggaagaaggccaggaccgagcccaaga 6736 Query: 127 acatcttggtcagataatgcatcatgtccatgtcagagtcagtatccttgacctttctgg 186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6735 acatcttggtcagataatgcatcatgtccatgtcagagtcagtatccttgacctttctgg 6676 Query: 187 tcgccatcgcggaggcagagggaagggcnnnnnnnacagcgtcagcgaggtccgagatga 246 |||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 6675 tcgccatcgcggaggcagagggaagggcttcgacgacagcgtcagcgaggtccgagatga 6616 Query: 247 aggatgaggtgcatccaagagctggaaccctcccccagttctcaatgcccgactctagag 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6615 aggatgaggtgcatccaagagctggaaccctcccccagttctcaatgcccgactctagag 6556 Query: 307 ccaactccctgtactccatgtcgatttcttccagtgtctcaatatgctcgctcacaaagc 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6555 ccaactccctgtactccatgtcgatttcttccagtgtctcaatatgctcgctcacaaagc 6496 Query: 367 t 367 | Sbjct: 6495 t 6495 Score = 115 bits (58), Expect = 1e-22 Identities = 74/82 (90%) Strand = Plus / Minus Query: 366 cttactgggacagccanganactcttaacacccttttnaccaanttcaactaaaacttna 425 |||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||| | Sbjct: 6012 cttactgggacagccaggagactcttaacacccttttgaccaagttcaactaaaacttca 5953 Query: 426 tcantntatggcttaanccatt 447 ||| | |||||||||| ||||| Sbjct: 5952 tcagtatatggcttaagccatt 5931
>dbj|AK068174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129M17, full insert sequence Length = 1963 Score = 238 bits (120), Expect = 1e-59 Identities = 185/209 (88%) Strand = Plus / Minus Query: 228 tcagcgaggtccgagatgaaggatgaggtgcatccaagagctggaaccctcccccagttc 287 ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1457 tcagcaaggtcggagatgaaggatgaggtgcatccaagagctggaacccttccccagttc 1398 Query: 288 tcaatgcccgactctagagccaactccctgtactccatgtcgatttcttccagtgtctca 347 || |||||||| |||||||||| |||| |||||||||||||||||||||||| ||||| Sbjct: 1397 tcgatgcccgattctagagccagctccttgtactccatgtcgatttcttccaaggtctcg 1338 Query: 348 atatgctcgctcacaaagcttactgggacagccanganactcttaacacccttttnacca 407 || ||||||||||||||||||||||| ||||||| || ||||| ||||||| || ||| Sbjct: 1337 atgtgctcgctcacaaagcttactggaacagccaggaggctctttacaccctgttgacct 1278 Query: 408 anttcaactaaaacttnatcantntatgg 436 | |||||||| ||||| |||| | ||||| Sbjct: 1277 agttcaactagaacttcatcagtatatgg 1249 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 60 gtgttccggaaagcagaaactagcctcggcgataacagcaggaagaaggccaggaccgag 119 |||||||||||||| |||| ||||| ||||| || || |||| ||| |||| || ||| Sbjct: 1625 gtgttccggaaagcggaaatcagccttggcgacaataggaggacgaacgccaagatggag 1566 Query: 120 cccaagaacatcttggtcagataatgcatcatgtccatgtc 160 || |||||||||||| |||| || ||||||| ||||||||| Sbjct: 1565 ccgaagaacatcttgctcaggtagtgcatcaggtccatgtc 1525
>gb|AY108431.1| Zea mays PCO068191 mRNA sequence Length = 1776 Score = 198 bits (100), Expect = 1e-47 Identities = 223/269 (82%) Strand = Plus / Minus Query: 179 ctttctggtcgccatcgcggaggcagagggaagggcnnnnnnnacagcgtcagcgaggtc 238 |||||||||||| | ||| || |||||||| ||||| ||||| || || ||||| Sbjct: 1389 ctttctggtcgcgagcgctgaagcagagggcagggcttcgacgacagcatctgcaaggtc 1330 Query: 239 cgagatgaaggatgaggtgcatccaagagctggaaccctcccccagttctcaatgcccga 298 |||||||| | ||| |||||||||||||| ||||||| |||||||||| ||||| || Sbjct: 1329 ggagatgaatgttgaagtgcatccaagagcaggaacccgaccccagttcttgatgcctga 1270 Query: 299 ctctagagccaactccctgtactccatgtcgatttcttccagtgtctcaatatgctcgct 358 || |||||||||||| ||||||||||||| |||||||||| |||||| || ||||| || Sbjct: 1269 ttccagagccaactccttgtactccatgtcaatttcttccaatgtctcgatgtgctcact 1210 Query: 359 cacaaagcttactgggacagccanganactcttaacacccttttnaccaanttcaactaa 418 ||||||||||||||| ||||||| || ||||| |||||||||| ||||| ||| ||||| Sbjct: 1209 cacaaagcttactggaacagccaggaggctcttcacacccttttgaccaagttctactaa 1150 Query: 419 aacttnatcantntatggcttaanccatt 447 ||||| |||| | |||||||| | ||||| Sbjct: 1149 aacttcatcagtatatggcttcagccatt 1121 Score = 46.1 bits (23), Expect = 0.097 Identities = 77/95 (81%) Strand = Plus / Minus Query: 64 tccggaaagcagaaactagcctcggcgataacagcaggaagaaggccaggaccgagccca 123 ||||||| || ||||||||||| || |||| |||||||| || |||| || ||||| | Sbjct: 1504 tccggaaggcggaaactagccttggtgatagcagcaggacaaatgccaagattgagccaa 1445 Query: 124 agaacatcttggtcagataatgcatcatgtccatg 158 | | ||||||||| || |||||| ||| ||||||| Sbjct: 1444 acagcatcttggtgaggtaatgcgtcaggtccatg 1410
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 190 bits (96), Expect = 3e-45 Identities = 129/140 (92%) Strand = Plus / Minus Query: 228 tcagcgaggtccgagatgaaggatgaggtgcatccaagagctggaaccctcccccagttc 287 ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 7150049 tcagcaaggtcggagatgaaggatgaggtgcatccaagagctggaacccttccccagttc 7149990 Query: 288 tcaatgcccgactctagagccaactccctgtactccatgtcgatttcttccagtgtctca 347 || |||||||| |||||||||| |||| |||||||||||||||||||||||| ||||| Sbjct: 7149989 tcgatgcccgattctagagccagctccttgtactccatgtcgatttcttccaaggtctcg 7149930 Query: 348 atatgctcgctcacaaagct 367 || ||||||||||||||||| Sbjct: 7149929 atgtgctcgctcacaaagct 7149910 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 60 gtgttccggaaagcagaaactagcctcggcgataacagcaggaagaaggccaggaccgag 119 |||||||||||||| |||| ||||| ||||| || || |||| ||| |||| || ||| Sbjct: 7150217 gtgttccggaaagcggaaatcagccttggcgacaataggaggacgaacgccaagatggag 7150158 Query: 120 cccaagaacatcttggtcagataatgcatcatgtccatgtc 160 || |||||||||||| |||| || ||||||| ||||||||| Sbjct: 7150157 ccgaagaacatcttgctcaggtagtgcatcaggtccatgtc 7150117
>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1381_H04 Length = 130961 Score = 190 bits (96), Expect = 3e-45 Identities = 129/140 (92%) Strand = Plus / Minus Query: 228 tcagcgaggtccgagatgaaggatgaggtgcatccaagagctggaaccctcccccagttc 287 ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2154 tcagcaaggtcggagatgaaggatgaggtgcatccaagagctggaacccttccccagttc 2095 Query: 288 tcaatgcccgactctagagccaactccctgtactccatgtcgatttcttccagtgtctca 347 || |||||||| |||||||||| |||| |||||||||||||||||||||||| ||||| Sbjct: 2094 tcgatgcccgattctagagccagctccttgtactccatgtcgatttcttccaaggtctcg 2035 Query: 348 atatgctcgctcacaaagct 367 || ||||||||||||||||| Sbjct: 2034 atgtgctcgctcacaaagct 2015 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 60 gtgttccggaaagcagaaactagcctcggcgataacagcaggaagaaggccaggaccgag 119 |||||||||||||| |||| ||||| ||||| || || |||| ||| |||| || ||| Sbjct: 2322 gtgttccggaaagcggaaatcagccttggcgacaataggaggacgaacgccaagatggag 2263 Query: 120 cccaagaacatcttggtcagataatgcatcatgtccatgtc 160 || |||||||||||| |||| || ||||||| ||||||||| Sbjct: 2262 ccgaagaacatcttgctcaggtagtgcatcaggtccatgtc 2222
>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0592C05 Length = 150478 Score = 190 bits (96), Expect = 3e-45 Identities = 129/140 (92%) Strand = Plus / Minus Query: 228 tcagcgaggtccgagatgaaggatgaggtgcatccaagagctggaaccctcccccagttc 287 ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 102128 tcagcaaggtcggagatgaaggatgaggtgcatccaagagctggaacccttccccagttc 102069 Query: 288 tcaatgcccgactctagagccaactccctgtactccatgtcgatttcttccagtgtctca 347 || |||||||| |||||||||| |||| |||||||||||||||||||||||| ||||| Sbjct: 102068 tcgatgcccgattctagagccagctccttgtactccatgtcgatttcttccaaggtctcg 102009 Query: 348 atatgctcgctcacaaagct 367 || ||||||||||||||||| Sbjct: 102008 atgtgctcgctcacaaagct 101989 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 60 gtgttccggaaagcagaaactagcctcggcgataacagcaggaagaaggccaggaccgag 119 |||||||||||||| |||| ||||| ||||| || || |||| ||| |||| || ||| Sbjct: 102296 gtgttccggaaagcggaaatcagccttggcgacaataggaggacgaacgccaagatggag 102237 Query: 120 cccaagaacatcttggtcagataatgcatcatgtccatgtc 160 || |||||||||||| |||| || ||||||| ||||||||| Sbjct: 102236 ccgaagaacatcttgctcaggtagtgcatcaggtccatgtc 102196
>gb|AY107322.1| Zea mays PCO069079 mRNA sequence Length = 389 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 234 aggtccgagatgaaggatgaggtgcatccaagagctggaaccctcccccagttctcaatg 293 ||||| |||||||| | || |||||||||||||| || |||| ||||||||||||||| Sbjct: 102 aggtcggagatgaaagtcgaagtgcatccaagagcagggacccggccccagttctcaatg 43 Query: 294 cccgactctagagccaactccctgtactccatgtc 328 || || || |||||||||||| ||||||||||||| Sbjct: 42 cctgattccagagccaactccttgtactccatgtc 8 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 60 gtgttccggaaagcagaaactagcctcggcgataacagcaggaagaaggccaggaccgag 119 |||||||||||||||||||| || || || || |||||||||| || |||| || ||| Sbjct: 276 gtgttccggaaagcagaaaccagtcttggtgacaacagcaggataaatgccaagattgag 217 Query: 120 cccaagaacatcttggtcagataatgcatca 150 || ||||||||||||||||| |||||||||| Sbjct: 216 ccgaagaacatcttggtcaggtaatgcatca 186
>emb|CT009490.7| M.truncatula DNA sequence from clone MTH2-174P8 on chromosome 3, complete sequence Length = 107411 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 303 agagccaactccctgtactccatgtcgatttcttccagtgtctcaatatgctcgctcaca 362 |||||||| ||||||||||||||||| |||||||| || ||||| || ||||| |||||| Sbjct: 46850 agagccaattccctgtactccatgtcaatttcttcaagagtctctatgtgctcactcaca 46909 Query: 363 aagct 367 ||||| Sbjct: 46910 aagct 46914
>ref|NM_122504.3| Arabidopsis thaliana ferrochelatase AT5G26030 transcript variant AT5G26030.1 mRNA, complete cds Length = 2038 Score = 58.0 bits (29), Expect = 3e-05 Identities = 96/119 (80%) Strand = Plus / Minus Query: 279 ccccagttctcaatgcccgactctagagccaactccctgtactccatgtcgatttcttcc 338 ||||||||||| | || ||||| ||||| || ||||| ||||||||||| || || || Sbjct: 1384 ccccagttctctacccctgactcaagagctaattccctatactccatgtctatctcctca 1325 Query: 339 agtgtctcaatatgctcgctcacaaagcttactgggacagccanganactcttaacacc 397 ||||||||||| ||||| ||||| || || ||||| || || | | |||||||||||| Sbjct: 1324 agtgtctcaatgtgctcactcacgaaactgactggaacggctagtagactcttaacacc 1266
>ref|NM_001036864.1| Arabidopsis thaliana ferrochelatase AT5G26030 transcript variant AT5G26030.2 mRNA, complete cds Length = 1976 Score = 58.0 bits (29), Expect = 3e-05 Identities = 96/119 (80%) Strand = Plus / Minus Query: 279 ccccagttctcaatgcccgactctagagccaactccctgtactccatgtcgatttcttcc 338 ||||||||||| | || ||||| ||||| || ||||| ||||||||||| || || || Sbjct: 1384 ccccagttctctacccctgactcaagagctaattccctatactccatgtctatctcctca 1325 Query: 339 agtgtctcaatatgctcgctcacaaagcttactgggacagccanganactcttaacacc 397 ||||||||||| ||||| ||||| || || ||||| || || | | |||||||||||| Sbjct: 1324 agtgtctcaatgtgctcactcacgaaactgactggaacggctagtagactcttaacacc 1266
>emb|X73417.1|ATHEM15A A.thaliana HEM15 mRNA for ferrochelatase Length = 1867 Score = 58.0 bits (29), Expect = 3e-05 Identities = 96/119 (80%) Strand = Plus / Minus Query: 279 ccccagttctcaatgcccgactctagagccaactccctgtactccatgtcgatttcttcc 338 ||||||||||| | || ||||| ||||| || ||||| ||||||||||| || || || Sbjct: 1235 ccccagttctctacccctgactcaagagctaattccctatactccatgtctatctcctca 1176 Query: 339 agtgtctcaatatgctcgctcacaaagcttactgggacagccanganactcttaacacc 397 ||||||||||| ||||| ||||| || || ||||| || || | | |||||||||||| Sbjct: 1175 agtgtctcaatgtgctcactcacgaaactgactggaacggctagtagactcttaacacc 1117
>gb|AY078959.1| Arabidopsis thaliana AT5g26030/T1N24_17 mRNA, complete sequence Length = 1960 Score = 58.0 bits (29), Expect = 3e-05 Identities = 96/119 (80%) Strand = Plus / Minus Query: 279 ccccagttctcaatgcccgactctagagccaactccctgtactccatgtcgatttcttcc 338 ||||||||||| | || ||||| ||||| || ||||| ||||||||||| || || || Sbjct: 1341 ccccagttctctacccctgactcaagagctaattccctatactccatgtctatctcctca 1282 Query: 339 agtgtctcaatatgctcgctcacaaagcttactgggacagccanganactcttaacacc 397 ||||||||||| ||||| ||||| || || ||||| || || | | |||||||||||| Sbjct: 1281 agtgtctcaatgtgctcactcacgaaactgactggaacggctagtagactcttaacacc 1223
>emb|BX832323.1|CNS09ZTO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH65ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1737 Score = 58.0 bits (29), Expect = 3e-05 Identities = 96/119 (80%) Strand = Plus / Minus Query: 279 ccccagttctcaatgcccgactctagagccaactccctgtactccatgtcgatttcttcc 338 ||||||||||| | || ||||| ||||| || ||||| ||||||||||| || || || Sbjct: 1227 ccccagttctctacccctgactcaagagctaattccctatactccatgtctatctcctca 1168 Query: 339 agtgtctcaatatgctcgctcacaaagcttactgggacagccanganactcttaacacc 397 ||||||||||| ||||| ||||| || || ||||| || || | | |||||||||||| Sbjct: 1167 agtgtctcaatgtgctcactcacgaaactgactggaacggctagtagactcttaacacc 1109
>emb|Y13382.1|ATFERRCHI Arabidopsis thaliana ferrochelatase-I gene and promoter sequence Length = 4304 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 279 ccccagttctcaatgcccgactctagagccaactccctgtactccatgtcgatttcttcc 338 ||||||||||| | || ||||| ||||| || ||||| ||||||||||| || || || Sbjct: 3656 ccccagttctctacccctgactcaagagctaattccctatactccatgtctatctcctca 3597 Query: 339 agtgtctcaatatgctcgctcac 361 ||||||||||| ||||| ||||| Sbjct: 3596 agtgtctcaatgtgctcactcac 3574
>gb|AF149413.1|T1N24 Arabidopsis thaliana BAC T1N24 Length = 127053 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 279 ccccagttctcaatgcccgactctagagccaactccctgtactccatgtcgatttcttcc 338 ||||||||||| | || ||||| ||||| || ||||| ||||||||||| || || || Sbjct: 47611 ccccagttctctacccctgactcaagagctaattccctatactccatgtctatctcctca 47670 Query: 339 agtgtctcaatatgctcgctcac 361 ||||||||||| ||||| ||||| Sbjct: 47671 agtgtctcaatgtgctcactcac 47693
>gb|AF332962.1| Chlamydomonas reinhardtii ferrochelatase mRNA, complete cds Length = 2660 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 317 gtactccatgtcgatttcttccagtgtctcaatatgctcgctcacaaagct 367 ||||||||||||||| || |||| |||||||| |||||||| |||||||| Sbjct: 1281 gtactccatgtcgatctcctccaacgtctcaatgtgctcgctgacaaagct 1231
>gb|AY108152.1| Zea mays PCO129975 mRNA sequence Length = 1119 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 267 gctggaaccctcccccagttctcaatgcccgactctagagccaactccctgtactccatg 326 |||||||||| ||||||| || ||||| || |||| ||||||||| ||||||||| Sbjct: 597 gctggaacccgtccccagtgcttgatgccagattctaaagccaactctttgtactccaca 538 Query: 327 tcgatttcttccagtgtctcaatatgctcgctcacaaa 364 ||||||||||||| || ||||| || ||||| ||||| Sbjct: 537 tcgatttcttccaaagtttcaatgtgttcgctaacaaa 500
>dbj|D26106.1|CUSHEMH2 Cucumber mRNA for ferrochelatase Length = 1763 Score = 52.0 bits (26), Expect = 0.002 Identities = 84/106 (79%) Strand = Plus / Minus Query: 342 gtctcaatatgctcgctcacaaagcttactgggacagccanganactcttaacacccttt 401 |||||||| ||||| ||||||||||| || || || || | || |||||||| |||||| Sbjct: 1275 gtctcaatgtgctcactcacaaagctcacgggaacggctaggagactcttaatacccttc 1216 Query: 402 tnaccaanttcaactaaaacttnatcantntatggcttaanccatt 447 | |||| ||||| | ||||| ||| | |||||||||| ||||| Sbjct: 1215 tggccaagctcaacaagaacttcatctgtgtatggcttaagccatt 1170
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 321 tccatgtcgatttcttccagtgtctc 346 |||||| ||||||||||||||||||| Sbjct: 1133001 tccatggcgatttcttccagtgtctc 1132976
>emb|AL845496.5| Mouse DNA sequence from clone RP23-245J21 on chromosome 4 Contains part of the Ptprd gene for receptor type protein tyrosine phosphatase D, complete sequence Length = 187964 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 ataacagcaggaagaaggcca 111 ||||||||||||||||||||| Sbjct: 97915 ataacagcaggaagaaggcca 97935
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 345 tcaatatgctcgctcacaaagcttactgggac 376 ||||||||||| |||||||| |||| |||||| Sbjct: 1808635 tcaatatgctcactcacaaaacttattgggac 1808604
>emb|AL714025.12| Mouse DNA sequence from clone RP23-16H24 on chromosome 13 Contains the Abt1 gene for activator of basal transcription, a novel gene, the Btn1a1 gene for butyrophilin 1A1, the gene for a novel butyrophilin subfamily 2 (Btn2) member and three CpG islands, complete sequence Length = 121496 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 ccctcccccagttctcaatg 293 |||||||||||||||||||| Sbjct: 29058 ccctcccccagttctcaatg 29039
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 gagatgaaggatgaggtgca 259 |||||||||||||||||||| Sbjct: 3460042 gagatgaaggatgaggtgca 3460023
>dbj|AK009949.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310057B04 product:unclassifiable, full insert sequence Length = 1268 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 ccctcccccagttctcaatg 293 |||||||||||||||||||| Sbjct: 1149 ccctcccccagttctcaatg 1130
>gb|AF123462.1|DJ526N18 Homo sapiens BAC526N18 neurexin III gene, partial cds Length = 180104 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 cagcaggaagaaggccagga 114 |||||||||||||||||||| Sbjct: 142923 cagcaggaagaaggccagga 142904
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 cagcaggaagaaggccagga 114 |||||||||||||||||||| Sbjct: 3013304 cagcaggaagaaggccagga 3013285 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,646,641 Number of Sequences: 3902068 Number of extensions: 3646641 Number of successful extensions: 54991 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 54884 Number of HSP's gapped (non-prelim): 104 length of query: 447 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 425 effective length of database: 17,147,199,772 effective search space: 7287559903100 effective search space used: 7287559903100 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)