ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags5g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Z70210.1|CEK08H2 Caenorhabditis elegans Cosmid K08H2, comple... 48 0.033
2emb|BX832097.1|CNS09ZNL Arabidopsis thaliana Full-length cDNA Co... 46 0.13
3gb|AC120404.25| Mus musculus chromosome 6, clone RP24-405O23, co... 42 2.1
4emb|AL138927.14| Human DNA sequence from clone RP11-184F4 on chr... 42 2.1
5gb|AC012690.17| Homo sapiens chromosome 10 clone RP11-127B19, co... 42 2.1
6gb|AC010998.14| Homo sapiens chromosome 10 clone RP11-95I16, com... 42 2.1
7emb|BX601643.6| Zebrafish DNA sequence from clone DKEY-32B18 in ... 42 2.1
8emb|AL929126.25| Mouse DNA sequence from clone RP23-424N5 on chr... 42 2.1
9gb|AC117728.10| Mus musculus chromosome 6, clone RP24-126C21, co... 42 2.1
10gb|AC114671.14| Mus musculus chromosome 5, clone RP24-199D21, co... 40 8.2
11gb|AC129590.4| Mus musculus BAC clone RP24-428B12 from chromosom... 40 8.2
12gb|AC126053.3| Mus musculus BAC clone RP23-280L21 from chromosom... 40 8.2
13gb|AC131671.3| Mus musculus BAC clone RP23-312H8 from chromosome... 40 8.2
14emb|CR387921.7| Zebrafish DNA sequence from clone CH211-84M6 in ... 40 8.2
15ref|XM_649627.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 8.2
16gb|AC148526.24| Medicago truncatula clone mth2-53k6, complete se... 40 8.2
17emb|AL450311.11| Human DNA sequence from clone RP11-343J3 on chr... 40 8.2
18emb|AL445435.11| Human DNA sequence from clone RP11-568G11 on ch... 40 8.2
19emb|AL356963.17| Human DNA sequence from clone RP11-535A9 on chr... 40 8.2
20emb|AL135786.17| Human DNA sequence from clone RP11-12D24 on chr... 40 8.2
21gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.2
22emb|BX470172.19| Zebrafish DNA sequence from clone DKEY-3H3 in l... 40 8.2
23emb|AL138654.1|ATF18P9 Arabidopsis thaliana DNA chromosome 3, BA... 40 8.2
24emb|BX640595.13| Zebrafish DNA sequence from clone CH211-117K11 ... 40 8.2
25emb|CR354535.11| Zebrafish DNA sequence from clone CH211-199M16 ... 40 8.2
26emb|AL590155.9| Zebrafish DNA sequence from clone RP71-79P20 in ... 40 8.2
27emb|BX248092.16| Zebrafish DNA sequence from clone CH211-194K22 ... 40 8.2
28emb|BX511268.5| Zebrafish DNA sequence from clone CH211-66B9 in ... 40 8.2
29emb|BX537310.7| Zebrafish DNA sequence from clone CH211-138N17 i... 40 8.2
30dbj|AK134828.1| Mus musculus adult male medulla oblongata cDNA, ... 40 8.2
31gb|AC103590.2| Homo sapiens chromosome 1 clone RP11-544K18, comp... 40 8.2
32emb|BX470118.9| Zebrafish DNA sequence from clone DKEY-207E22 in... 40 8.2
33gb|AC158760.4| Mus musculus chromosome 5, clone RP23-319E24, com... 40 8.2
34gb|AF068710.2| Caenorhabditis elegans cosmid T06A1, complete seq... 40 8.2
35emb|BX511250.8| Zebrafish DNA sequence from clone CH211-57K11 in... 40 8.2
36gb|AC132308.4| Mus musculus BAC clone RP24-292O13 from chromosom... 40 8.2
37emb|BX640536.6| Zebrafish DNA sequence from clone CH211-191A6 in... 40 8.2
38emb|BX548030.10| Zebrafish DNA sequence from clone CH211-194H8 i... 40 8.2
39emb|BX005444.14| Zebrafish DNA sequence from clone CH211-119H23 ... 40 8.2
40dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
41dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
42gb|AC087902.43| Mus musculus strain C57BL/6J chromosome 15 clone... 40 8.2
43gb|AC104758.12| Homo sapiens chromosome 15, clone RP11-114H24, c... 40 8.2
44gb|AC012353.6| Homo sapiens BAC clone RP11-82P18 from 2, complet... 40 8.2
45dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
46dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
47dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.2
48emb|AL954725.9| Zebrafish DNA sequence from clone DKEY-11H11 in ... 40 8.2
49emb|BX649457.15| Zebrafish DNA sequence from clone DKEYP-87E7 in... 40 8.2
50gb|AC147267.6| Mus musculus BAC clone RP24-263E13 from chromosom... 40 8.2
51emb|CT025616.13| Mouse DNA sequence from clone RP23-451G17 on ch... 40 8.2
52emb|AL844899.33| Zebrafish DNA sequence from clone CH211-287K8 i... 40 8.2
53gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.2
54emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, c... 40 8.2
55emb|AL732330.14| Mouse DNA sequence from clone RP23-130L11 on ch... 40 8.2 
>emb|Z70210.1|CEK08H2 Caenorhabditis elegans Cosmid K08H2, complete sequence
          Length = 36539

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 266   gcgtgttttatttctaatacaact 289
             ||||||||||||||||||||||||
Sbjct: 36176 gcgtgttttatttctaatacaact 36153
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>emb|BX832097.1|CNS09ZNL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH51ZC06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1291

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 172 aaacaaggaacaaaaacaaacaa 194
           |||||||||||||||||||||||
Sbjct: 508 aaacaaggaacaaaaacaaacaa 486
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>gb|AC120404.25| Mus musculus chromosome 6, clone RP24-405O23, complete sequence
          Length = 202146

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 174    acaaggaacaaaaacaaacaa 194
              |||||||||||||||||||||
Sbjct: 140730 acaaggaacaaaaacaaacaa 140710
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>emb|AL138927.14| Human DNA sequence from clone RP11-184F4 on chromosome 1q31.1-31.3,
             complete sequence
          Length = 165067

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 170   agaaacaaggaacaaaaacaaacaa 194
             ||||||||||||||||| |||||||
Sbjct: 29014 agaaacaaggaacaaaagcaaacaa 29038
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>gb|AC012690.17| Homo sapiens chromosome 10 clone RP11-127B19, complete sequence
          Length = 161276

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 174   acaaggaacaaaaacaaacaa 194
             |||||||||||||||||||||
Sbjct: 30202 acaaggaacaaaaacaaacaa 30182
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>gb|AC010998.14| Homo sapiens chromosome 10 clone RP11-95I16, complete sequence
          Length = 146833

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 174    acaaggaacaaaaacaaacaa 194
              |||||||||||||||||||||
Sbjct: 128836 acaaggaacaaaaacaaacaa 128816
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>emb|BX601643.6| Zebrafish DNA sequence from clone DKEY-32B18 in linkage group 9,
             complete sequence
          Length = 165857

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 31    atatataattatgcattcttg 51
             |||||||||||||||||||||
Sbjct: 57243 atatataattatgcattcttg 57263
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>emb|AL929126.25| Mouse DNA sequence from clone RP23-424N5 on chromosome 2, complete
              sequence
          Length = 151556

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 416    acacaaaagactagtctgaac 436
              |||||||||||||||||||||
Sbjct: 107610 acacaaaagactagtctgaac 107630
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>gb|AC117728.10| Mus musculus chromosome 6, clone RP24-126C21, complete sequence
          Length = 180605

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 30    aatatataattatgcattctt 50
             |||||||||||||||||||||
Sbjct: 44497 aatatataattatgcattctt 44517
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>gb|AC114671.14| Mus musculus chromosome 5, clone RP24-199D21, complete sequence
          Length = 172228

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   aaacaaggaacaaaaacaaa 191
             ||||||||||||||||||||
Sbjct: 20366 aaacaaggaacaaaaacaaa 20385
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>gb|AC129590.4| Mus musculus BAC clone RP24-428B12 from chromosome 14, complete sequence
          Length = 180177

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    ctgtaaaacaaacagccata 137
              ||||||||||||||||||||
Sbjct: 117782 ctgtaaaacaaacagccata 117763
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>gb|AC126053.3| Mus musculus BAC clone RP23-280L21 from chromosome 16, complete sequence
          Length = 217131

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 245    gtttctgtattttgtgcatt 264
              ||||||||||||||||||||
Sbjct: 127022 gtttctgtattttgtgcatt 127003
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>gb|AC131671.3| Mus musculus BAC clone RP23-312H8 from chromosome 3, complete sequence
          Length = 195851

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     tacaatatataattatgcat 46
              ||||||||||||||||||||
Sbjct: 123593 tacaatatataattatgcat 123574
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>emb|CR387921.7| Zebrafish DNA sequence from clone CH211-84M6 in linkage group 17,
             complete sequence
          Length = 187568

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   aaattttcgaccatcataaa 229
             ||||||||||||||||||||
Sbjct: 25602 aaattttcgaccatcataaa 25621
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>ref|XM_649627.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (46.t00046)
           partial mRNA
          Length = 1053

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 402 tcaaggcaaaatcaacacaaaaga 425
           ||||| ||||||||||||||||||
Sbjct: 270 tcaagacaaaatcaacacaaaaga 293
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>gb|AC148526.24| Medicago truncatula clone mth2-53k6, complete sequence
          Length = 89055

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   agaaacaaggaacaaaaaca 189
             ||||||||||||||||||||
Sbjct: 15448 agaaacaaggaacaaaaaca 15429
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>emb|AL450311.11| Human DNA sequence from clone RP11-343J3 on chromosome 10 Contains the
             NEUROG3 gene for neurogenin 3 (ngn3, Atoh5, Math4B), a
             novel gene,  an ATP synthase 6 (MTATP6)(ATP6) pseudogene,
             a cytochrome c oxidase II (MTCO2)(COII) pseudogene, a
             cytochrome c oxidase I (MTCO1)(COI) pseudogene, a NADH
             dehydrogenase 2 (MTND2) pseudogene, a NADH dehydrogenase 1
             (MTND1) pseudogene, the gene for a novel protein
             (LOC219738), the 5' end of a novel gene and four CpG
             islands, complete sequence
          Length = 165110

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 295   tttgtacttataccaaaaataaat 318
             ||||||| ||||||||||||||||
Sbjct: 79999 tttgtacatataccaaaaataaat 79976
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>emb|AL445435.11| Human DNA sequence from clone RP11-568G11 on chromosome 1 Contains the
             the 5' end of the RAB3-GAP150 gene for rab3
             GTPase-activating protein the non-catalytic subunit, a
             mortality factor 4 like 1 (MORF4L1) processed pseudogene
             and the serine/threonine kinase 6 (STK6) known processed
             pseudogene, complete sequence
          Length = 189953

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 348   ttaactgcatattttttgttccta 371
             ||||||||||||||||| ||||||
Sbjct: 34812 ttaactgcatattttttcttccta 34835
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>emb|AL356963.17| Human DNA sequence from clone RP11-535A9 on chromosome 6, complete
             sequence
          Length = 91469

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   caaggaacaaaaacaaacaa 194
             ||||||||||||||||||||
Sbjct: 41535 caaggaacaaaaacaaacaa 41554
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>emb|AL135786.17| Human DNA sequence from clone RP11-12D24 on chromosome 9p23-24.3
             Contains the RLN1 gene for relaxin 1(H1) (RLXH1),the RLN2
             gene for relaxin 2 (H2) (RLXH2), a  high-mobility group
             nucleosomal binding domain 2 (HMGN2) pseudogene, a  novel
             pseudogene, the gene for uncharacterized hematopoietic
             stem/progenitor cells protein (MDS030), a novel pseudogene
             (FLJ39176) and four CpG islands, complete sequence
          Length = 156592

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   aattctcatcatgtgttaaa 212
             ||||||||||||||||||||
Sbjct: 61646 aattctcatcatgtgttaaa 61665
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>gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0056E15,
              complete sequence
          Length = 147941

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 144    agagctgccatatacagatc 163
              ||||||||||||||||||||
Sbjct: 117481 agagctgccatatacagatc 117500
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>emb|BX470172.19| Zebrafish DNA sequence from clone DKEY-3H3 in linkage group 5, complete
              sequence
          Length = 243270

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    aggaacaaaaacaaacaatt 196
              ||||||||||||||||||||
Sbjct: 243119 aggaacaaaaacaaacaatt 243100
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>emb|AL138654.1|ATF18P9 Arabidopsis thaliana DNA chromosome 3, BAC clone F18P9
          Length = 95996

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    tattacaatatataattatg 43
             ||||||||||||||||||||
Sbjct: 49883 tattacaatatataattatg 49864
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>emb|BX640595.13| Zebrafish DNA sequence from clone CH211-117K11 in linkage group 2,
             complete sequence
          Length = 121429

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   ggaacaaaaacaaacaattc 197
             ||||||||||||||||||||
Sbjct: 84508 ggaacaaaaacaaacaattc 84527
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>emb|CR354535.11| Zebrafish DNA sequence from clone CH211-199M16 in linkage group 25,
             complete sequence
          Length = 225139

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   actttgtacttataccaaaa 312
             ||||||||||||||||||||
Sbjct: 13426 actttgtacttataccaaaa 13445
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>emb|AL590155.9| Zebrafish DNA sequence from clone RP71-79P20 in linkage group 23 Contains
              part of the putative novel DIRS-1 like retrotransposon
              DIRSDR2 (DIRS-1 Danio rerio 2), the 5' end of a novel gene
              and four CpG islands, complete sequence
          Length = 161731

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     tattacaatatataattatg 43
              ||||||||||||||||||||
Sbjct: 154252 tattacaatatataattatg 154271
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>emb|BX248092.16| Zebrafish DNA sequence from clone CH211-194K22 in linkage group 12,
              complete sequence
          Length = 217001

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 172    aaacaaggaacaaaaacaaacaat 195
              ||||||| ||||||||||||||||
Sbjct: 187599 aaacaagtaacaaaaacaaacaat 187622
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>emb|BX511268.5| Zebrafish DNA sequence from clone CH211-66B9 in linkage group 2,
             complete sequence
          Length = 167067

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    atatataattatgcattctt 50
             ||||||||||||||||||||
Sbjct: 89683 atatataattatgcattctt 89664
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>emb|BX537310.7| Zebrafish DNA sequence from clone CH211-138N17 in linkage group 3,
             complete sequence
          Length = 163184

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   aaacaaggaacaaaaacaaa 191
             ||||||||||||||||||||
Sbjct: 12475 aaacaaggaacaaaaacaaa 12456
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>dbj|AK134828.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
            enriched library, clone:6330581H02
            product:unclassifiable, full insert sequence
          Length = 2262

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 245  gtttctgtattttgtgcatt 264
            ||||||||||||||||||||
Sbjct: 1874 gtttctgtattttgtgcatt 1893
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>gb|AC103590.2| Homo sapiens chromosome 1 clone RP11-544K18, complete sequence
          Length = 213056

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 348    ttaactgcatattttttgttccta 371
              ||||||||||||||||| ||||||
Sbjct: 191941 ttaactgcatattttttcttccta 191964
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>emb|BX470118.9| Zebrafish DNA sequence from clone DKEY-207E22 in linkage group 5,
             complete sequence
          Length = 223990

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   aggaacaaaaacaaacaatt 196
             ||||||||||||||||||||
Sbjct: 54492 aggaacaaaaacaaacaatt 54473
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>gb|AC158760.4| Mus musculus chromosome 5, clone RP23-319E24, complete sequence
          Length = 191682

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 353    tgcatattttttgttcctaa 372
              ||||||||||||||||||||
Sbjct: 135286 tgcatattttttgttcctaa 135305
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>gb|AF068710.2| Caenorhabditis elegans cosmid T06A1, complete sequence
          Length = 37126

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 164   aagaatagaaacaaggaacaaaaacaaa 191
             |||||||||||| ||||| |||||||||
Sbjct: 13651 aagaatagaaactaggaaaaaaaacaaa 13624
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>emb|BX511250.8| Zebrafish DNA sequence from clone CH211-57K11 in linkage group 16,
              complete sequence
          Length = 189081

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 28     acaatatataattatgcattcttg 51
              |||||||||||| |||||||||||
Sbjct: 158335 acaatatataatcatgcattcttg 158358
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>gb|AC132308.4| Mus musculus BAC clone RP24-292O13 from chromosome 5, complete sequence
          Length = 184560

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   aaacaaggaacaaaaacaaa 191
             ||||||||||||||||||||
Sbjct: 14110 aaacaaggaacaaaaacaaa 14091
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>emb|BX640536.6| Zebrafish DNA sequence from clone CH211-191A6 in linkage group 5,
              complete sequence
          Length = 137923

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     tatataattatgcattcttg 51
              ||||||||||||||||||||
Sbjct: 107057 tatataattatgcattcttg 107076
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>emb|BX548030.10| Zebrafish DNA sequence from clone CH211-194H8 in linkage group 19,
             complete sequence
          Length = 140638

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 28    acaatatataattatgcattcttg 51
             |||||||||||| |||||||||||
Sbjct: 69735 acaatatataatcatgcattcttg 69712
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>emb|BX005444.14| Zebrafish DNA sequence from clone CH211-119H23 in linkage group 2,
             complete sequence
          Length = 168979

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    atatataattatgcattctt 50
             ||||||||||||||||||||
Sbjct: 71493 atatataattatgcattctt 71512
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 144     agagctgccatatacagatc 163
               ||||||||||||||||||||
Sbjct: 1273134 agagctgccatatacagatc 1273115
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 172      aaacaaggaacaaaaacaaa 191
                ||||||||||||||||||||
Sbjct: 19788599 aaacaaggaacaaaaacaaa 19788580
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>gb|AC087902.43| Mus musculus strain C57BL/6J chromosome 15 clone rp23-343o3, complete
              sequence
          Length = 220173

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 164    aagaatagaaacaaggaacaaaaa 187
              ||||||| ||||||||||||||||
Sbjct: 141005 aagaataaaaacaaggaacaaaaa 140982
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>gb|AC104758.12| Homo sapiens chromosome 15, clone RP11-114H24, complete sequence
          Length = 175763

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 164    aagaatagaaacaaggaacaaaaa 187
              |||||||||||||||||| |||||
Sbjct: 105989 aagaatagaaacaaggaagaaaaa 105966
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>gb|AC012353.6| Homo sapiens BAC clone RP11-82P18 from 2, complete sequence
          Length = 203755

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   agaaacaaggaacaaaaaca 189
             ||||||||||||||||||||
Sbjct: 17260 agaaacaaggaacaaaaaca 17241
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>dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0048D08
          Length = 145772

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    aaacaaggaacaaaaacaaa 191
              ||||||||||||||||||||
Sbjct: 120605 aaacaaggaacaaaaacaaa 120586
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>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0650C03
          Length = 144337

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   aaacaaggaacaaaaacaaa 191
             ||||||||||||||||||||
Sbjct: 28758 aaacaaggaacaaaaacaaa 28739
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>dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC6
          Length = 82952

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 86   ttcgcacttcaactttctta 105
            ||||||||||||||||||||
Sbjct: 5748 ttcgcacttcaactttctta 5729
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>emb|AL954725.9| Zebrafish DNA sequence from clone DKEY-11H11 in linkage group 23,
              complete sequence
          Length = 219971

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     tattacaatatataattatg 43
              ||||||||||||||||||||
Sbjct: 145667 tattacaatatataattatg 145686
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>emb|BX649457.15| Zebrafish DNA sequence from clone DKEYP-87E7 in linkage group 22,
             complete sequence
          Length = 159207

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    ctactattacaatatataat 39
             ||||||||||||||||||||
Sbjct: 19668 ctactattacaatatataat 19649
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>gb|AC147267.6| Mus musculus BAC clone RP24-263E13 from chromosome 3, complete
            sequence
          Length = 155979

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 246  tttctgtattttgtgcattc 265
            ||||||||||||||||||||
Sbjct: 4350 tttctgtattttgtgcattc 4369
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>emb|CT025616.13| Mouse DNA sequence from clone RP23-451G17 on chromosome 13, complete
            sequence
          Length = 144243

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 112  gagatcctgtaaaacaaaca 131
            ||||||||||||||||||||
Sbjct: 1660 gagatcctgtaaaacaaaca 1641
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>emb|AL844899.33| Zebrafish DNA sequence from clone CH211-287K8 in linkage group 5,
              complete sequence
          Length = 167857

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    aaggaacaaaaacaaacaat 195
              ||||||||||||||||||||
Sbjct: 146840 aaggaacaaaaacaaacaat 146859
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 144     agagctgccatatacagatc 163
               ||||||||||||||||||||
Sbjct: 1270855 agagctgccatatacagatc 1270836
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>emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, complete sequence
          Length = 153155

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    ctactattacaatatataat 39
             ||||||||||||||||||||
Sbjct: 85008 ctactattacaatatataat 84989
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>emb|AL732330.14| Mouse DNA sequence from clone RP23-130L11 on chromosome 2, complete
             sequence
          Length = 241418

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   aatagaaacaaggaacaaaa 186
             ||||||||||||||||||||
Sbjct: 10186 aatagaaacaaggaacaaaa 10167


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,942,376
Number of Sequences: 3902068
Number of extensions: 7942376
Number of successful extensions: 194813
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 194471
Number of HSP's gapped (non-prelim): 342
length of query: 599
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 576
effective length of database: 17,143,297,704
effective search space: 9874539477504
effective search space used: 9874539477504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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