>HASS_XENLA (O57428) Hyaluronan synthase-related protein (xHAS-RS)|
          Length = 583

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -3

Query: 246 WYSPTNNHXXVHLVQR-AGPLR-WLYSDAAFCVSGDCCSWKS-VVPLYH 109
           W  P  N    HL+   AG +  W+     +CVSG CC  +S  VP  H
Sbjct: 524 WSKPQANRELYHLLYGCAGYMAYWVLMTVIYCVSGSCCKMRSQAVPQTH 572

>LSPA_VIBPA (Q87S89) Lipoprotein signal peptidase (EC 3.4.23.36)|
           (Prolipoprotein signal peptidase) (Signal peptidase II)
           (SPase II)
          Length = 169

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
 Frame = -3

Query: 276 NVKHGFVXELWYSPTNNHXXVH--------LVQRAGPLRWLYSDAAFCVSGDCCSWKSVV 121
           N+ +G+   +   P  N   VH        L  +AG  RWL++  AF V+G    W S +
Sbjct: 36  NMGYGWANRIEILPFFNLLYVHNYGAAFSFLSDQAGWQRWLFTGIAFVVTGLLTYWMSKL 95

Query: 120 P 118
           P
Sbjct: 96  P 96

>LSPA_VIBVY (Q7MNM7) Lipoprotein signal peptidase (EC 3.4.23.36)|
           (Prolipoprotein signal peptidase) (Signal peptidase II)
           (SPase II)
          Length = 168

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
 Frame = -3

Query: 276 NVKHGFVXELWYSPTNNHXXVH--------LVQRAGPLRWLYSDAAFCVSGDCCSWKSVV 121
           N+ +G+   +   P  N   VH        L  +AG  RWL++  AF V+G    W S +
Sbjct: 36  NMGYGWANRIEVLPFFNLLYVHNYGAAFSFLSDQAGWQRWLFTGIAFVVTGLLTYWMSKL 95

Query: 120 P 118
           P
Sbjct: 96  P 96

>LSPA_VIBVU (Q8DES8) Lipoprotein signal peptidase (EC 3.4.23.36)|
           (Prolipoprotein signal peptidase) (Signal peptidase II)
           (SPase II)
          Length = 168

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
 Frame = -3

Query: 276 NVKHGFVXELWYSPTNNHXXVH--------LVQRAGPLRWLYSDAAFCVSGDCCSWKSVV 121
           N+ +G+   +   P  N   VH        L  +AG  RWL++  AF V+G    W S +
Sbjct: 36  NMGYGWANRIEVLPFFNLLYVHNYGAAFSFLSDQAGWQRWLFTGIAFVVTGLLTYWMSKL 95

Query: 120 P 118
           P
Sbjct: 96  P 96

>UME1_YEAST (Q03010) Meiosis negative regulator UME1|
          Length = 460

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = -1

Query: 260 SSXNFGTLLLIIIXSFTWCREQVLSDGYIVMLHSVFLATVVPGSQLYPCI 111
           S  N   + L    S  W RE V S  Y +M  S  L++   G+Q  PC+
Sbjct: 139 SEINVKVIALSTNGSLAWFREGVKSPVYTMMEPSTSLSSASSGNQNKPCV 188

>ALMS1_MOUSE (Q8K4E0) Alstrom syndrome protein 1 homolog|
          Length = 3251

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -3

Query: 174  SDAAFCVSGDCCSWKSVVPLYHQSVTDHE*RIYPASS 64
            SD++  VS  CCSW + +P   +SV+D     +P +S
Sbjct: 1572 SDSSSDVSDGCCSWDNNLPESLESVSDVFLNFFPYTS 1608

>GP2_CANFA (P25291) Pancreatic secretory granule membrane major glycoprotein|
           GP2 precursor (Pancreatic zymogen granule membrane
           protein GP-2)
          Length = 509

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -3

Query: 249 LWYSPTNNHXXVHLVQRAGPLRWLYSDAAFCVSGDCCSWKSVV 121
           LW + T+      +V R     W         SG+CC WK+VV
Sbjct: 94  LWLNGTHPTLAEGIVNRTACAHW---------SGNCCLWKTVV 127

>APS_HUMAN (O14492) SH2 and PH domain-containing adapter protein APS (Adapter|
           protein with pleckstrin homology and Src homology 2
           domains)
          Length = 632

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -3

Query: 207 VQRAGPLRWLYSDAAFCVSGDCCSWKSVVPLYHQSVTDHE*RI 79
           +QR G LR++ +D A   SG    W+    L  ++V +   R+
Sbjct: 194 IQREGALRFMVADDAAAGSGGSAQWQKCRLLLRRAVAEERFRL 236

>CBIO2_MYCGA (Q7NAQ6) Cobalt import ATP-binding protein cbiO 2|
          Length = 279

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 271 HVSFIYNSLQPVYSDTAYSLYSKLLNCV 354
           +VSF YNS + V  + +Y +Y K   C+
Sbjct: 12  NVSFSYNSKKQVLKNVSYEIYEKEYVCI 39


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,335,239
Number of Sequences: 219361
Number of extensions: 974274
Number of successful extensions: 2162
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2162
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)