| Clone Name | rbags5f08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... | 40 | 1.6 | 2 | gb|AC010109.6| Drosophila melanogaster 3L BAC RP98-9B4 (Roswell ... | 38 | 6.4 | 3 | gb|AE003478.3| Drosophila melanogaster chromosome 3L, section 12... | 38 | 6.4 | 4 | gb|AC004658.1|AC004658 Drosophila melanogaster DNA sequence (P1s... | 38 | 6.4 |
|---|
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 cgacagattgacggcgacgc 125 |||||||||||||||||||| Sbjct: 8957460 cgacagattgacggcgacgc 8957479
>gb|AC010109.6| Drosophila melanogaster 3L BAC RP98-9B4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167675 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 ctacaaagcgggaaaattc 50 ||||||||||||||||||| Sbjct: 42565 ctacaaagcgggaaaattc 42583
>gb|AE003478.3| Drosophila melanogaster chromosome 3L, section 12 of 83 of the complete sequence Length = 317354 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 ctacaaagcgggaaaattc 50 ||||||||||||||||||| Sbjct: 215606 ctacaaagcgggaaaattc 215588
>gb|AC004658.1|AC004658 Drosophila melanogaster DNA sequence (P1s DS00079 (D250) and DS08435 (D258)), complete sequence Length = 94718 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 ctacaaagcgggaaaattc 50 ||||||||||||||||||| Sbjct: 4162 ctacaaagcgggaaaattc 4180 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 594,129 Number of Sequences: 3902068 Number of extensions: 594129 Number of successful extensions: 36174 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 36131 Number of HSP's gapped (non-prelim): 43 length of query: 135 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 114 effective length of database: 17,151,101,840 effective search space: 1955225609760 effective search space used: 1955225609760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)