>ref|XM_478960.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2355

 Score =  418 bits (211), Expect = e-113
 Identities = 355/403 (88%)
 Strand = Plus / Minus

                                                                        
Query: 312  tccaggatgaagctggggaaggttgctaaggaatgatttagcatctgctatcttaccatg 371
            ||||||||||||||| |||||||||||||  |||  ||| ||||| |  | ||| |||| 
Sbjct: 2295 tccaggatgaagctgaggaaggttgctaacaaatattttggcatcagtcaactttccatt 2236

                                                                        
Query: 372  cctacagtattcctgcagtattgaattgtaagttctctcattgggcttgcaaccacgagt 431
            |||||| ||  ||| || ||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 2235 cctacaatagccctccactattgaattgtaagttctctcattgggcttgcaaccttgagt 2176

                                                                        
Query: 432  aaccatataacgtactaaatcaattgcctcttcgaacattgagttggctacataactctt 491
             |||||||| |||||||| ||||| || || || |||||||||||||  |||||||||||
Sbjct: 2175 gaccatatagcgtactaactcaatagcttcctcaaacattgagttggagacataactctt 2116

                                                                        
Query: 492  aacaaagatattgtatgtcacaatatctggtatcaggcctgaagatttcatctcagaaaa 551
             ||||| ||||||||||| |||| ||||||| |||| |||||| ||||||||||||| ||
Sbjct: 2115 gacaaaaatattgtatgttacaacatctggtttcagacctgaacatttcatctcagagaa 2056

                                                                        
Query: 552  caatcttgaggcttctttcatctgcccttttcttccatatgcatagatcattgtgttgta 611
            ||||||||| |||||||||||||| |||||||||||||||||||||||||  ||||| ||
Sbjct: 2055 caatcttgatgcttctttcatctgtccttttcttccatatgcatagatcacagtgttata 1996

                                                                        
Query: 612  agaatatcgatcaggacgtgcaccacttgacttgatctcagtgaggatattttcacactt 671
            |||||||| |||||| ||  ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1995 agaatatctatcagggcgcacaccacttgacttgatctcagtgagaatattttcacactt 1936

                                                       
Query: 672  ttcacaatcacctaagcgagaatacatgtgcatcaagctattg 714
            ||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 1935 ttcacaatcacctaaacgagaatacatatgcatcaagctattg 1893

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  418 bits (211), Expect = e-113
 Identities = 355/403 (88%)
 Strand = Plus / Minus

                                                                            
Query: 312      tccaggatgaagctggggaaggttgctaaggaatgatttagcatctgctatcttaccatg 371
                ||||||||||||||| |||||||||||||  |||  ||| ||||| |  | ||| |||| 
Sbjct: 24019895 tccaggatgaagctgaggaaggttgctaacaaatattttggcatcagtcaactttccatt 24019836

                                                                            
Query: 372      cctacagtattcctgcagtattgaattgtaagttctctcattgggcttgcaaccacgagt 431
                |||||| ||  ||| || ||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 24019835 cctacaatagccctccactattgaattgtaagttctctcattgggcttgcaaccttgagt 24019776

                                                                            
Query: 432      aaccatataacgtactaaatcaattgcctcttcgaacattgagttggctacataactctt 491
                 |||||||| |||||||| ||||| || || || |||||||||||||  |||||||||||
Sbjct: 24019775 gaccatatagcgtactaactcaatagcttcctcaaacattgagttggagacataactctt 24019716

                                                                            
Query: 492      aacaaagatattgtatgtcacaatatctggtatcaggcctgaagatttcatctcagaaaa 551
                 ||||| ||||||||||| |||| ||||||| |||| |||||| ||||||||||||| ||
Sbjct: 24019715 gacaaaaatattgtatgttacaacatctggtttcagacctgaacatttcatctcagagaa 24019656

                                                                            
Query: 552      caatcttgaggcttctttcatctgcccttttcttccatatgcatagatcattgtgttgta 611
                ||||||||| |||||||||||||| |||||||||||||||||||||||||  ||||| ||
Sbjct: 24019655 caatcttgatgcttctttcatctgtccttttcttccatatgcatagatcacagtgttata 24019596

                                                                            
Query: 612      agaatatcgatcaggacgtgcaccacttgacttgatctcagtgaggatattttcacactt 671
                |||||||| |||||| ||  ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 24019595 agaatatctatcagggcgcacaccacttgacttgatctcagtgagaatattttcacactt 24019536

                                                           
Query: 672      ttcacaatcacctaagcgagaatacatgtgcatcaagctattg 714
                ||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 24019535 ttcacaatcacctaaacgagaatacatatgcatcaagctattg 24019493

>dbj|AP003750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1174_G05
          Length = 111202

 Score =  418 bits (211), Expect = e-113
 Identities = 355/403 (88%)
 Strand = Plus / Minus

                                                                         
Query: 312   tccaggatgaagctggggaaggttgctaaggaatgatttagcatctgctatcttaccatg 371
             ||||||||||||||| |||||||||||||  |||  ||| ||||| |  | ||| |||| 
Sbjct: 61503 tccaggatgaagctgaggaaggttgctaacaaatattttggcatcagtcaactttccatt 61444

                                                                         
Query: 372   cctacagtattcctgcagtattgaattgtaagttctctcattgggcttgcaaccacgagt 431
             |||||| ||  ||| || ||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 61443 cctacaatagccctccactattgaattgtaagttctctcattgggcttgcaaccttgagt 61384

                                                                         
Query: 432   aaccatataacgtactaaatcaattgcctcttcgaacattgagttggctacataactctt 491
              |||||||| |||||||| ||||| || || || |||||||||||||  |||||||||||
Sbjct: 61383 gaccatatagcgtactaactcaatagcttcctcaaacattgagttggagacataactctt 61324

                                                                         
Query: 492   aacaaagatattgtatgtcacaatatctggtatcaggcctgaagatttcatctcagaaaa 551
              ||||| ||||||||||| |||| ||||||| |||| |||||| ||||||||||||| ||
Sbjct: 61323 gacaaaaatattgtatgttacaacatctggtttcagacctgaacatttcatctcagagaa 61264

                                                                         
Query: 552   caatcttgaggcttctttcatctgcccttttcttccatatgcatagatcattgtgttgta 611
             ||||||||| |||||||||||||| |||||||||||||||||||||||||  ||||| ||
Sbjct: 61263 caatcttgatgcttctttcatctgtccttttcttccatatgcatagatcacagtgttata 61204

                                                                         
Query: 612   agaatatcgatcaggacgtgcaccacttgacttgatctcagtgaggatattttcacactt 671
             |||||||| |||||| ||  ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61203 agaatatctatcagggcgcacaccacttgacttgatctcagtgagaatattttcacactt 61144

                                                        
Query: 672   ttcacaatcacctaagcgagaatacatgtgcatcaagctattg 714
             ||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 61143 ttcacaatcacctaaacgagaatacatatgcatcaagctattg 61101

>gb|AF130351.2|AF130351 Homo sapiens chromosome 21 clone PAC 190N10 map 21q11.2, complete
             sequence
          Length = 102043

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 105   tcttagtggttgctctaaatatt 127
             |||||||||||||||||||||||
Sbjct: 93837 tcttagtggttgctctaaatatt 93815

>gb|AF127936.2|AF127936 Homo sapiens chromosome 21 clone PAC 153I22 map21q11.2, complete
             sequence
          Length = 149684

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 105   tcttagtggttgctctaaatatt 127
             |||||||||||||||||||||||
Sbjct: 22806 tcttagtggttgctctaaatatt 22784

>dbj|BS000011.1| Pan troglodytes chromosome 22 clone:RP43-017I17, map 22, complete
             sequences
          Length = 191345

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 105   tcttagtggttgctctaaatatt 127
             |||||||||||||||||||||||
Sbjct: 83362 tcttagtggttgctctaaatatt 83340

>emb|AL163207.2|HS21C007 Homo sapiens chromosome 21 segment HS21C007
          Length = 340000

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 105   tcttagtggttgctctaaatatt 127
             |||||||||||||||||||||||
Sbjct: 58971 tcttagtggttgctctaaatatt 58949

>emb|AL078473.2|HS2A11 Homo sapiens chromosome 21 Cosmid LLNCO21A112, complete sequence
          Length = 46007

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 105   tcttagtggttgctctaaatatt 127
             |||||||||||||||||||||||
Sbjct: 43331 tcttagtggttgctctaaatatt 43309

>gb|AC146980.9| Mus musculus chromosome 3, clone RP24-97N14, complete sequence
          Length = 161054

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 661   ttttcacacttttcacaatcac 682
             ||||||||||||||||||||||
Sbjct: 86933 ttttcacacttttcacaatcac 86954

>gb|AC153544.4| Mus musculus 10 BAC RP23-326C6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 215036

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 590   atgcatagatcattgtgttgta 611
             ||||||||||||||||||||||
Sbjct: 10391 atgcatagatcattgtgttgta 10370

>gb|AC012081.16| Homo sapiens 3 BAC RP11-416O18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 178317

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 646   atctcagtgaggatattttcac 667
             ||||||||||||||||||||||
Sbjct: 76720 atctcagtgaggatattttcac 76741

>gb|AC160757.3| Mus musculus chromosome 3, clone RP23-200C3, complete sequence
          Length = 228862

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 661    ttttcacacttttcacaatcac 682
              ||||||||||||||||||||||
Sbjct: 219909 ttttcacacttttcacaatcac 219930

>emb|AL627344.8| Human DNA sequence from clone RP11-39H24 on chromosome 13, complete
             sequence
          Length = 97057

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 107   ttagtggttgctctaaatattt 128
             ||||||||||||||||||||||
Sbjct: 70575 ttagtggttgctctaaatattt 70596

>gb|AC058784.17|AC058784 Homo sapiens chromosome 13 clone RP11-288O16, complete sequence
          Length = 163781

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 107   ttagtggttgctctaaatattt 128
             ||||||||||||||||||||||
Sbjct: 81179 ttagtggttgctctaaatattt 81158

>dbj|AK109740.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-D11, full
            insert sequence
          Length = 1873

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 474  gttggctacataactcttaacaaaga 499
            ||||||||||||| ||||||||||||
Sbjct: 1030 gttggctacataaatcttaacaaaga 1055

>gb|AC153484.4| Mus musculus 10 BAC RP23-388B8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 166648

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 590    atgcatagatcattgtgttgta 611
              ||||||||||||||||||||||
Sbjct: 135533 atgcatagatcattgtgttgta 135512

>gb|AC118588.6| Mus musculus chromosome 15, clone RP24-576D3, complete sequence
          Length = 175210

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 8     gtttctttctattggaaagat 28
             |||||||||||||||||||||
Sbjct: 35030 gtttctttctattggaaagat 35010

>gb|AC127591.4| Mus musculus BAC clone RP23-315I14 from chromosome 15, complete
             sequence
          Length = 182619

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 8     gtttctttctattggaaagat 28
             |||||||||||||||||||||
Sbjct: 21922 gtttctttctattggaaagat 21942

>emb|Z83826.13|HS473B4 Human DNA sequence from clone RP3-473B4 on chromosome X Contains the 3'
              end of the LOC159091 gene, two novel genes, a high-mobility
              group protein pseudogene and three CpG islands, complete
              sequence
          Length = 177180

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 56     ggtacagtggtgatggtgaat 76
              |||||||||||||||||||||
Sbjct: 172558 ggtacagtggtgatggtgaat 172538

>emb|AL391827.18| Human DNA sequence from clone RP11-63G20 on chromosome 10 Contains the
             5' end of a novel gene (FLJ13114 FLJ40653) and two CpG
             islands, complete sequence
          Length = 183430

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 581   ttcttccatatgcatagatca 601
             |||||||||||||||||||||
Sbjct: 66449 ttcttccatatgcatagatca 66429

>emb|AL136093.8| Human DNA sequence from clone RP3-472A9 on chromosome 6q13-14.3
             Contains the 3' end of the MYO6 gene for myosin VI (DFNA22
             KIAA0389), complete sequence
          Length = 85195

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 655   aggatattttcacacttttcacaat 679
             |||| ||||||||||||||||||||
Sbjct: 32853 aggaaattttcacacttttcacaat 32829

>emb|X94301.1|STDNAJ S.tuberosum mRNA for DnaJ protein
          Length = 1421

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 121  aaatatttcttcagacaatgt 141
            |||||||||||||||||||||
Sbjct: 1409 aaatatttcttcagacaatgt 1389

>gb|AC159472.6| Mus musculus 10 BAC RP23-244J20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 213230

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 627    acgtgcaccacttgacttgat 647
              |||||||||||||||||||||
Sbjct: 168769 acgtgcaccacttgacttgat 168749

>gb|AC009742.4|AC009742 Drosophila melanogaster, chromosome 3R, region 90C-90C, BAC clone
              BACR21K03, complete sequence
          Length = 178100

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 287    gtctttgttgttcctgtttgg 307
              |||||||||||||||||||||
Sbjct: 146596 gtctttgttgttcctgtttgg 146576

>gb|AC006170.11|AC006170 Drosophila melanogaster, chromosome 3R, region 98E2-98F2, BAC clone
              BACR48K07, complete sequence
          Length = 168471

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 658    atattttcacacttttcacaa 678
              |||||||||||||||||||||
Sbjct: 130310 atattttcacacttttcacaa 130330

>gb|AC095041.3| Homo sapiens BAC clone RP11-84H6 from 4, complete sequence
          Length = 176008

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 659    tattttcacacttttcacaat 679
              |||||||||||||||||||||
Sbjct: 164699 tattttcacacttttcacaat 164679

>gb|AC108205.5| Homo sapiens BAC clone RP11-140N6 from 4, complete sequence
          Length = 132623

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 659    tattttcacacttttcacaat 679
              |||||||||||||||||||||
Sbjct: 114913 tattttcacacttttcacaat 114893

>gb|AC007854.4|AC007854 Drosophila melanogaster, chromosome 3R, region 98F-98F, BAC clone
             BACR13H19, complete sequence
          Length = 155666

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 658   atattttcacacttttcacaa 678
             |||||||||||||||||||||
Sbjct: 66141 atattttcacacttttcacaa 66161

>gb|AC007810.6|AC007810 Drosophila melanogaster, chromosome 3R, region 90C-90C, BAC clone
             BACR14A01, complete sequence
          Length = 176735

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 287   gtctttgttgttcctgtttgg 307
             |||||||||||||||||||||
Sbjct: 40477 gtctttgttgttcctgtttgg 40457

>gb|AF229096.1|F229081S16 Homo sapiens myosin VI (MYO6) gene, exons 17 and 18
          Length = 1719

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 655 aggatattttcacacttttcacaat 679
           |||| ||||||||||||||||||||
Sbjct: 469 aggaaattttcacacttttcacaat 445

>gb|AE003718.3| Drosophila melanogaster chromosome 3R, section 56 of 118 of the complete
              sequence
          Length = 253101

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 287    gtctttgttgttcctgtttgg 307
              |||||||||||||||||||||
Sbjct: 246740 gtctttgttgttcctgtttgg 246720

>gb|AE003767.2| Drosophila melanogaster chromosome 3R, section 105 of 118 of the complete
              sequence
          Length = 231562

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 658    atattttcacacttttcacaa 678
              |||||||||||||||||||||
Sbjct: 113411 atattttcacacttttcacaa 113431


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,301,664
Number of Sequences: 3902068
Number of extensions: 7301664
Number of successful extensions: 150687
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 150570
Number of HSP's gapped (non-prelim): 114
length of query: 730
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 707
effective length of database: 17,143,297,704
effective search space: 12120311476728
effective search space used: 12120311476728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)