ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4p18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY108904.1| Zea mays PCO090377 mRNA sequence 135 2e-28
2ref|NM_126275.2| Arabidopsis thaliana unknown protein AT2G02150 ... 50 0.010
3gb|AC005936.3| Arabidopsis thaliana chromosome 2 clone F5O4 map ... 50 0.010
4dbj|AK221550.1| Arabidopsis thaliana mRNA for hypothetical prote... 50 0.010
5emb|BX820850.1|CNS0A9I4 Arabidopsis thaliana Full-length cDNA Co... 50 0.010
6gb|AC155719.11| Mus musculus 6 BAC RP24-236K6 (Roswell Park Canc... 44 0.63
7gb|AC006204.1| Homo sapiens PAC clone RP5-1102B4 from 7, complet... 42 2.5
8emb|AL136089.15| Human DNA sequence from clone RP1-278E11 on chr... 42 2.5
9gb|AC023755.14| Homo sapiens chromosome 12, clone RP11-44P17, co... 42 2.5
10gb|BC102857.1| Bos taurus antigen CD3D, delta polypeptide (TiT3 ... 42 2.5
11gb|AC011257.9| Homo sapiens chromosome , clone RP11-26E5, comple... 42 2.5
12emb|AJ293578.1|HSA293578 Homo sapiens partial MOCS1 gene, exons 2-8 42 2.5
13ref|NM_001034033.1| Bos taurus antigen CD3D, delta polypeptide (... 42 2.5
14gb|CP000097.1| Synechococcus sp. CC9902, complete genome 40 9.8
15ref|XM_466225.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.8
16ref|XM_515601.1| PREDICTED: Pan troglodytes LOC459381 (LOC459381... 40 9.8
17ref|XM_615671.2| PREDICTED: Bos taurus similar to anaphase promo... 40 9.8
18gb|AC182584.3| Pan troglodytes BAC clone CH251-530K15 from chrom... 40 9.8
19gb|AC185139.2| Pan troglodytes BAC clone CH251-174C16 from chrom... 40 9.8
20ref|XM_532958.2| PREDICTED: Canis familiaris similar to anaphase... 40 9.8
21ref|XM_744527.1| Aspergillus fumigatus Af293 methyltransferase (... 40 9.8
22gb|BC030543.1| Homo sapiens anaphase promoting complex subunit 1... 40 9.8
23gb|BC033072.1| Homo sapiens anaphase promoting complex subunit 1... 40 9.8
24gb|AC122826.4| Mus musculus BAC clone RP23-209L3 from chromosome... 40 9.8
25ref|XM_843746.1| PREDICTED: Canis familiaris similar to Myosin r... 40 9.8
26gb|BC011756.1| Homo sapiens cDNA clone IMAGE:3531245, **** WARNI... 40 9.8
27gb|BC013972.1| Homo sapiens cDNA clone IMAGE:4137637, **** WARNI... 40 9.8
28gb|AC183099.3| Pan troglodytes BAC clone CH251-727F5 from chromo... 40 9.8
29gb|AF265664.1| Solanum tuberosum resistance gene cluster, comple... 40 9.8
30dbj|AB069968.1| Oryza sativa (japonica cultivar-group) OsCLC-2 g... 40 9.8
31dbj|AB069967.1| Oryza sativa (japonica cultivar-group) OsCLC-2 m... 40 9.8
32dbj|AK023807.1| Homo sapiens cDNA FLJ13745 fis, clone PLACE30002... 40 9.8
33dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome 40 9.8
34gb|AC093166.6| Homo sapiens BAC clone RP11-1429F20 from 2, compl... 40 9.8
35gb|AC107878.2| Homo sapiens chromosome 18, clone RP11-138C8, com... 40 9.8
36ref|NM_022662.2| Homo sapiens anaphase promoting complex subunit... 40 9.8
37ref|NM_001012626.1| Homo sapiens hypothetical protein LOC285074 ... 40 9.8
38ref|XM_496557.2| PREDICTED: Homo sapiens RANBP2-like and GRIP do... 40 9.8
39ref|XM_935054.1| PREDICTED: Homo sapiens similar to anaphase pro... 40 9.8
40ref|XM_930490.1| PREDICTED: Homo sapiens similar to anaphase pro... 40 9.8
41gb|AC013660.9| Homo sapiens, clone RP11-20A14, complete sequence 40 9.8
42dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
43gb|AC125232.4| Homo sapiens BAC clone RP11-1252D15 from 2, compl... 40 9.8
44gb|AC092651.3| Homo sapiens BAC clone RP11-431O23 from 2, comple... 40 9.8
45gb|AC093616.5| Homo sapiens BAC clone RP13-511M20 from 2, comple... 40 9.8
46dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
47gb|BC069048.1| Homo sapiens hypothetical protein LOC285074, mRNA... 40 9.8
48emb|AJ278357.1|HSA278357 Homo sapiens mRNA for Tsg24 protein 40 9.8
49dbj|AK069669.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.8
50gb|BC104904.1| Homo sapiens anaphase promoting complex subunit 1... 40 9.8
51gb|BC104902.1| Homo sapiens anaphase promoting complex subunit 1... 40 9.8
52dbj|AK066353.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.8
53dbj|AK062032.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.8
54emb|CT030181.13| Mouse DNA sequence from clone RP23-115A18 on ch... 40 9.8
55dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 9.8
56emb|AL832013.1|HSM803320 Homo sapiens mRNA; cDNA DKFZp451E124 (f... 40 9.8 
>gb|AY108904.1| Zea mays PCO090377 mRNA sequence
          Length = 650

 Score =  135 bits (68), Expect = 2e-28
 Identities = 167/200 (83%)
 Strand = Plus / Minus

                                                                       
Query: 518 ctgaggaacaaaccaacggagaagtctcatcctctgacaaaactgatgtgccaggaatgt 577
           |||| ||||||||||| | |||  |||||||||||| |||| |   |||  |||| ||||
Sbjct: 328 ctgaagaacaaaccaatgaagagttctcatcctctgccaaagcacttgtatcagggatgt 269

                                                                       
Query: 578 caaatactggctgtggtgtacgcctgtacttgtgccgggctgaatagaatttgtaatctc 637
           ||||| ||| |||||| | |||||||  ||| ||||||| ||||||||||||||||||||
Sbjct: 268 caaatgctgcctgtggggaacgcctgatcttatgccggggtgaatagaatttgtaatctc 209

                                                                       
Query: 638 ttgatgaaatggccacctcatttcgaccagttaatcttttgaaccattccgcatcctgca 697
           ||||  |||| || || ||| |||||||||| || |||||||||||||||||||| | ||
Sbjct: 208 ttgaacaaatagcaacttcacttcgaccagtcaaccttttgaaccattccgcatcttcca 149

                               
Query: 698 ttctcatattatttggcctc 717
           |||||||||| | |||||||
Sbjct: 148 ttctcatattttctggcctc 129



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                       
Query: 205 ccacattcgtcacaaaacttcgcaggcctgcttggaagaatattcaagcgtcctccaggg 264
           ||||| || ||||| ||||||||||| ||| |||||| ||||| || |||||||||| | 
Sbjct: 644 ccacactcatcacagaacttcgcagggctggttggaataatatgcatgcgtcctccaaga 585

                                                                   
Query: 265 tggctgtgtccagcttgcatggaagatagatgcggagataaataagactggtgctg 320
           || |  || ||| |||||| | |||||| |||  |||||||||||| ||| |||||
Sbjct: 584 tgaccttgcccaacttgcaagcaagatatatgttgagataaataagcctgttgctg 529
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>ref|NM_126275.2| Arabidopsis thaliana unknown protein AT2G02150 mRNA, complete cds
          Length = 3554

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 142  atccctagcctcttggtgccacactctgagcagaacttggatgtc 186
            ||||| || |||||||  ||||||||||||||||| |||||||||
Sbjct: 3422 atcccgagtctcttggaaccacactctgagcagaatttggatgtc 3378
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>gb|AC005936.3| Arabidopsis thaliana chromosome 2 clone F5O4 map CIC11A04, complete
             sequence
          Length = 93212

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                          
Query: 142   atccctagcctcttggtgccacactctgagcagaacttggatgtc 186
             ||||| || |||||||  ||||||||||||||||| |||||||||
Sbjct: 38866 atcccgagtctcttggaaccacactctgagcagaatttggatgtc 38822
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>dbj|AK221550.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
            clone: RAFL07-76-K07
          Length = 1625

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 142  atccctagcctcttggtgccacactctgagcagaacttggatgtc 186
            ||||| || |||||||  ||||||||||||||||| |||||||||
Sbjct: 1389 atcccgagtctcttggaaccacactctgagcagaatttggatgtc 1345
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>emb|BX820850.1|CNS0A9I4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH75ZC12 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1576

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 142  atccctagcctcttggtgccacactctgagcagaacttggatgtc 186
            ||||| || |||||||  ||||||||||||||||| |||||||||
Sbjct: 1398 atcccgagtctcttggaaccacactctgagcagaatttggatgtc 1354
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>gb|AC155719.11| Mus musculus 6 BAC RP24-236K6 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 179419

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 566   tgccaggaatgtcaaatactgg 587
             ||||||||||||||||||||||
Sbjct: 89783 tgccaggaatgtcaaatactgg 89762
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>gb|AC006204.1| Homo sapiens PAC clone RP5-1102B4 from 7, complete sequence
          Length = 144563

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 113    aaattccttaattatgcattactca 137
              |||||||||||||||| ||||||||
Sbjct: 135077 aaattccttaattatgtattactca 135101
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>emb|AL136089.15| Human DNA sequence from clone RP1-278E11 on chromosome 6 Contains the
             3' end of the novel gene KIAA0381, the MOCS1 gene for
             molybdenum cofactor synthesis 1, a pseudogene similar to
             60S ribosomal protein L23 (RPL23) and a pseudogene similar
             to tubulin beta chain (TUBB), complete sequence
          Length = 99479

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 116   ttccttaattatgcattactc 136
             |||||||||||||||||||||
Sbjct: 17108 ttccttaattatgcattactc 17088
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>gb|AC023755.14| Homo sapiens chromosome 12, clone RP11-44P17, complete sequence
          Length = 135689

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 571   ggaatgtcaaatactggctgt 591
             |||||||||||||||||||||
Sbjct: 47735 ggaatgtcaaatactggctgt 47715
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>gb|BC102857.1| Bos taurus antigen CD3D, delta polypeptide (TiT3 complex), mRNA
           (cDNA clone MGC:127796 IMAGE:7954758), complete cds
          Length = 1494

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 259 ccagggtggctgtgtccagct 279
           |||||||||||||||||||||
Sbjct: 335 ccagggtggctgtgtccagct 315
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>gb|AC011257.9| Homo sapiens chromosome , clone RP11-26E5, complete sequence
          Length = 184194

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 571    ggaatgtcaaatactggctgt 591
              |||||||||||||||||||||
Sbjct: 102163 ggaatgtcaaatactggctgt 102143
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>emb|AJ293578.1|HSA293578 Homo sapiens partial MOCS1 gene, exons 2-8
          Length = 17572

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 116  ttccttaattatgcattactc 136
            |||||||||||||||||||||
Sbjct: 8215 ttccttaattatgcattactc 8235
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>ref|NM_001034033.1| Bos taurus antigen CD3D, delta polypeptide (TiT3 complex) (CD3D),
           mRNA
          Length = 1494

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 259 ccagggtggctgtgtccagct 279
           |||||||||||||||||||||
Sbjct: 335 ccagggtggctgtgtccagct 315
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>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 74      ggttctgcatcatggccgaaacaa 97
               ||||||||| ||||||||||||||
Sbjct: 1181119 ggttctgcaccatggccgaaacaa 1181096
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>ref|XM_466225.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2928

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 385  tgttggttttgctgaatggc 404
            ||||||||||||||||||||
Sbjct: 2254 tgttggttttgctgaatggc 2273
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>ref|XM_515601.1| PREDICTED: Pan troglodytes LOC459381 (LOC459381), mRNA
          Length = 2186

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 cttcgcaggcctgcttggaa 241
           ||||||||||||||||||||
Sbjct: 345 cttcgcaggcctgcttggaa 326
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>ref|XM_615671.2| PREDICTED: Bos taurus similar to anaphase promoting complex subunit
           1 (LOC535565), partial mRNA
          Length = 3573

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 cttcgcaggcctgcttggaa 241
           ||||||||||||||||||||
Sbjct: 853 cttcgcaggcctgcttggaa 834
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>gb|AC182584.3| Pan troglodytes BAC clone CH251-530K15 from chromosome 2, complete
              sequence
          Length = 206103

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    cttcgcaggcctgcttggaa 241
              ||||||||||||||||||||
Sbjct: 127224 cttcgcaggcctgcttggaa 127243
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>gb|AC185139.2| Pan troglodytes BAC clone CH251-174C16 from chromosome 2, complete
             sequence
          Length = 166804

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   cttcgcaggcctgcttggaa 241
             ||||||||||||||||||||
Sbjct: 15726 cttcgcaggcctgcttggaa 15745
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>ref|XM_532958.2| PREDICTED: Canis familiaris similar to anaphase promoting complex
            subunit 1 (LOC475750), mRNA
          Length = 6085

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  cttcgcaggcctgcttggaa 241
            ||||||||||||||||||||
Sbjct: 2965 cttcgcaggcctgcttggaa 2946
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>ref|XM_744527.1| Aspergillus fumigatus Af293 methyltransferase (Afu2g04890) partial
           mRNA
          Length = 1017

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 381 agtatgttggttttgctgaa 400
           ||||||||||||||||||||
Sbjct: 69  agtatgttggttttgctgaa 50
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>gb|BC030543.1| Homo sapiens anaphase promoting complex subunit 1, mRNA (cDNA clone
           IMAGE:4998908), **** WARNING: chimeric clone ****
          Length = 2104

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 cttcgcaggcctgcttggaa 241
           ||||||||||||||||||||
Sbjct: 688 cttcgcaggcctgcttggaa 669
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>gb|BC033072.1| Homo sapiens anaphase promoting complex subunit 1, mRNA (cDNA clone
           IMAGE:3843009), **** WARNING: chimeric clone ****
          Length = 2248

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 cttcgcaggcctgcttggaa 241
           ||||||||||||||||||||
Sbjct: 810 cttcgcaggcctgcttggaa 791
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>gb|AC122826.4| Mus musculus BAC clone RP23-209L3 from chromosome 18, complete sequence
          Length = 197208

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 513   aaactctgaggaacaaacca 532
             ||||||||||||||||||||
Sbjct: 95514 aaactctgaggaacaaacca 95533
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>ref|XM_843746.1| PREDICTED: Canis familiaris similar to Myosin regulatory light
           chain 2, nonsarcomeric (Myosin RLC), transcript variant
           1 (LOC607207), mRNA
          Length = 1204

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 aggcctgcttggaagaatat 247
           ||||||||||||||||||||
Sbjct: 13  aggcctgcttggaagaatat 32
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>gb|BC011756.1| Homo sapiens cDNA clone IMAGE:3531245, **** WARNING: chimeric clone
           ****
          Length = 2219

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 cttcgcaggcctgcttggaa 241
           ||||||||||||||||||||
Sbjct: 784 cttcgcaggcctgcttggaa 765
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>gb|BC013972.1| Homo sapiens cDNA clone IMAGE:4137637, **** WARNING: chimeric clone
           ****
          Length = 2219

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 cttcgcaggcctgcttggaa 241
           ||||||||||||||||||||
Sbjct: 784 cttcgcaggcctgcttggaa 765
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>gb|AC183099.3| Pan troglodytes BAC clone CH251-727F5 from chromosome 2, complete
             sequence
          Length = 183714

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   cttcgcaggcctgcttggaa 241
             ||||||||||||||||||||
Sbjct: 83569 cttcgcaggcctgcttggaa 83588
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>gb|AF265664.1| Solanum tuberosum resistance gene cluster, complete sequence
          Length = 187352

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   aaattccttaattatgcatt 132
             ||||||||||||||||||||
Sbjct: 76893 aaattccttaattatgcatt 76874
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>dbj|AB069968.1| Oryza sativa (japonica cultivar-group) OsCLC-2 gene for chloride
            channel, paritial cds
          Length = 6803

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 385  tgttggttttgctgaatggc 404
            ||||||||||||||||||||
Sbjct: 5113 tgttggttttgctgaatggc 5132
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>dbj|AB069967.1| Oryza sativa (japonica cultivar-group) OsCLC-2 mRNA for chloride
            channel, partial cds
          Length = 2539

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 385  tgttggttttgctgaatggc 404
            ||||||||||||||||||||
Sbjct: 1865 tgttggttttgctgaatggc 1884
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>dbj|AK023807.1| Homo sapiens cDNA FLJ13745 fis, clone PLACE3000244, highly similar to
            PROTEIN TSG24 (MEIOTIC CHECK POINT REGULATOR)
          Length = 4534

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  cttcgcaggcctgcttggaa 241
            ||||||||||||||||||||
Sbjct: 1441 cttcgcaggcctgcttggaa 1422
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>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome
          Length = 2694756

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 125     tatgcattactcatcagatc 144
               ||||||||||||||||||||
Sbjct: 1995667 tatgcattactcatcagatc 1995648
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>gb|AC093166.6| Homo sapiens BAC clone RP11-1429F20 from 2, complete sequence
          Length = 213865

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    cttcgcaggcctgcttggaa 241
              ||||||||||||||||||||
Sbjct: 151904 cttcgcaggcctgcttggaa 151923
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>gb|AC107878.2| Homo sapiens chromosome 18, clone RP11-138C8, complete sequence
          Length = 182375

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    tatttccttgaaggaagagt 24
            ||||||||||||||||||||
Sbjct: 5365 tatttccttgaaggaagagt 5346
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>ref|NM_022662.2| Homo sapiens anaphase promoting complex subunit 1 (ANAPC1), mRNA
          Length = 6329

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  cttcgcaggcctgcttggaa 241
            ||||||||||||||||||||
Sbjct: 3215 cttcgcaggcctgcttggaa 3196
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>ref|NM_001012626.1| Homo sapiens hypothetical protein LOC285074 (LOC285074), mRNA
          Length = 2007

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 cttcgcaggcctgcttggaa 241
           ||||||||||||||||||||
Sbjct: 576 cttcgcaggcctgcttggaa 557
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>ref|XM_496557.2| PREDICTED: Homo sapiens RANBP2-like and GRIP domain containing 1
           (RGPD1), mRNA
          Length = 456

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 cttcgcaggcctgcttggaa 241
           ||||||||||||||||||||
Sbjct: 394 cttcgcaggcctgcttggaa 375
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>ref|XM_935054.1| PREDICTED: Homo sapiens similar to anaphase promoting complex
           subunit 1, transcript variant 3 (LOC653663), mRNA
          Length = 1765

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 cttcgcaggcctgcttggaa 241
           ||||||||||||||||||||
Sbjct: 480 cttcgcaggcctgcttggaa 461
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>ref|XM_930490.1| PREDICTED: Homo sapiens similar to anaphase promoting complex
           subunit 1, transcript variant 2 (LOC653663), mRNA
          Length = 1962

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 cttcgcaggcctgcttggaa 241
           ||||||||||||||||||||
Sbjct: 480 cttcgcaggcctgcttggaa 461
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>gb|AC013660.9| Homo sapiens, clone RP11-20A14, complete sequence
          Length = 164324

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      tatttccttgaaggaagagt 24
              ||||||||||||||||||||
Sbjct: 129854 tatttccttgaaggaagagt 129835
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 385      tgttggttttgctgaatggc 404
                ||||||||||||||||||||
Sbjct: 21171381 tgttggttttgctgaatggc 21171362
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>gb|AC125232.4| Homo sapiens BAC clone RP11-1252D15 from 2, complete sequence
          Length = 43275

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   cttcgcaggcctgcttggaa 241
             ||||||||||||||||||||
Sbjct: 34199 cttcgcaggcctgcttggaa 34218
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>gb|AC092651.3| Homo sapiens BAC clone RP11-431O23 from 2, complete sequence
          Length = 96153

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   cttcgcaggcctgcttggaa 241
             ||||||||||||||||||||
Sbjct: 81069 cttcgcaggcctgcttggaa 81050
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>gb|AC093616.5| Homo sapiens BAC clone RP13-511M20 from 2, complete sequence
          Length = 192494

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   cttcgcaggcctgcttggaa 241
             ||||||||||||||||||||
Sbjct: 61523 cttcgcaggcctgcttggaa 61504
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>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0038F20
          Length = 129595

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   tgttggttttgctgaatggc 404
             ||||||||||||||||||||
Sbjct: 78097 tgttggttttgctgaatggc 78078
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>gb|BC069048.1| Homo sapiens hypothetical protein LOC285074, mRNA (cDNA clone
           IMAGE:4111322), complete cds
          Length = 2007

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 cttcgcaggcctgcttggaa 241
           ||||||||||||||||||||
Sbjct: 576 cttcgcaggcctgcttggaa 557
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>emb|AJ278357.1|HSA278357 Homo sapiens mRNA for Tsg24 protein
          Length = 6282

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  cttcgcaggcctgcttggaa 241
            ||||||||||||||||||||
Sbjct: 3230 cttcgcaggcctgcttggaa 3211
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>dbj|AK069669.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028O13, full
            insert sequence
          Length = 2927

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 385  tgttggttttgctgaatggc 404
            ||||||||||||||||||||
Sbjct: 2254 tgttggttttgctgaatggc 2273
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>gb|BC104904.1| Homo sapiens anaphase promoting complex subunit 1, mRNA (cDNA clone
            MGC:132564 IMAGE:8143907), complete cds
          Length = 5902

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  cttcgcaggcctgcttggaa 241
            ||||||||||||||||||||
Sbjct: 3017 cttcgcaggcctgcttggaa 2998
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>gb|BC104902.1| Homo sapiens anaphase promoting complex subunit 1, mRNA (cDNA clone
            MGC:132562 IMAGE:8143905), complete cds
          Length = 5902

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  cttcgcaggcctgcttggaa 241
            ||||||||||||||||||||
Sbjct: 3017 cttcgcaggcctgcttggaa 2998
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>dbj|AK066353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063B06, full
            insert sequence
          Length = 3084

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 385  tgttggttttgctgaatggc 404
            ||||||||||||||||||||
Sbjct: 2403 tgttggttttgctgaatggc 2422
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>dbj|AK062032.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-H01, full
           insert sequence
          Length = 1358

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgttggttttgctgaatggc 404
           ||||||||||||||||||||
Sbjct: 684 tgttggttttgctgaatggc 703
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>emb|CT030181.13| Mouse DNA sequence from clone RP23-115A18 on chromosome 9, complete
              sequence
          Length = 281479

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 542    tctcatcctctgacaaaact 561
              ||||||||||||||||||||
Sbjct: 199683 tctcatcctctgacaaaact 199702
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 265     tggctgtgtccagcttgcat 284
               ||||||||||||||||||||
Sbjct: 2153116 tggctgtgtccagcttgcat 2153097
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>emb|AL832013.1|HSM803320 Homo sapiens mRNA; cDNA DKFZp451E124 (from clone DKFZp451E124)
          Length = 5055

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  cttcgcaggcctgcttggaa 241
            ||||||||||||||||||||
Sbjct: 1571 cttcgcaggcctgcttggaa 1552


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,883,167
Number of Sequences: 3902068
Number of extensions: 5883167
Number of successful extensions: 104279
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104127
Number of HSP's gapped (non-prelim): 150
length of query: 717
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 694
effective length of database: 17,143,297,704
effective search space: 11897448606576
effective search space used: 11897448606576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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