| Clone Name | rbags4p17 |
|---|---|
| Clone Library Name | barley_pub |
>RIP6_ORYSA (Q7XD66) Putative ripening-related protein 6 precursor| Length = 167 Score = 162 bits (409), Expect = 7e-40 Identities = 74/115 (64%), Positives = 93/115 (80%), Gaps = 1/115 (0%) Frame = -2 Query: 506 PCVSWHSTTGVMTLNGFQKGEEGGGPSACDGKYHSNKEMIVALSSRWYGGGRRCGKMIRI 327 P VS T VMT+NGF++GE+GGGP+ACDG+YHS++ ++ ALS+ W+ GGRRC + IRI Sbjct: 53 PAVSEDGTPAVMTVNGFEEGEDGGGPAACDGRYHSDRSLVAALSTGWFAGGRRCHRGIRI 112 Query: 326 TSEQNGRTAQAKVVDECDSSN-GCKDSIVDASAAVWKALRLNTDIGEVPVTWTDA 165 TS QNGR+ A VVDECDS + GCKD IVD SAAVW AL L+T++GEVPVTW+DA Sbjct: 113 TSRQNGRSVVATVVDECDSRHGGCKDDIVDTSAAVWSALGLDTNVGEVPVTWSDA 167
>RIP7_ORYSA (Q7XD65) Putative ripening-related protein 7 precursor| Length = 162 Score = 147 bits (371), Expect = 2e-35 Identities = 68/111 (61%), Positives = 85/111 (76%), Gaps = 8/111 (7%) Frame = -2 Query: 476 VMTLNGFQKGEEGGGPSACDGKYHSNKEMIVALSSRWYGGGRRCGKMIRITSEQNG---- 309 VMT+NGF+KGE+GGGP+ACDG YHS+ E+IVALS+ W+ GGRRC + IRIT ++G Sbjct: 51 VMTVNGFEKGEDGGGPAACDGHYHSDGELIVALSTEWFAGGRRCHRRIRITPSEHGRRGG 110 Query: 308 ----RTAQAKVVDECDSSNGCKDSIVDASAAVWKALRLNTDIGEVPVTWTD 168 R +A VVDECDS GCKD +VD+S AVW+AL L+TD GEV VTW+D Sbjct: 111 GGGRRAVEATVVDECDSRRGCKDDVVDSSPAVWRALGLDTDSGEVRVTWSD 161
>GRI22_VITVI (Q9M4H4) Ripening-related protein grip22 precursor| Length = 220 Score = 142 bits (357), Expect = 7e-34 Identities = 75/125 (60%), Positives = 87/125 (69%), Gaps = 10/125 (8%) Frame = -2 Query: 509 PPCVSWHSTTGVMTLNGFQKGEEGGGPSACDGKYHSNKEMIVALSSRWYGGGRRCGKMIR 330 PP S ST V+T N F+KG +GGGPSACD KYH N E IVALS+ WY GG RCGKMIR Sbjct: 99 PPITS--STPAVLTNNNFEKGGDGGGPSACDNKYHDNSERIVALSTGWYNGGSRCGKMIR 156 Query: 329 ITSEQNGRTAQAKVVDECDSSNG----------CKDSIVDASAAVWKALRLNTDIGEVPV 180 IT+ QNGR+ AKVVDECDS +G C ++IVD S AVW AL L+ +IGEV V Sbjct: 157 ITA-QNGRSVLAKVVDECDSMHGCDKEHAGQPPCDNNIVDGSNAVWNALGLDINIGEVDV 215 Query: 179 TWTDA 165 TW+ A Sbjct: 216 TWSMA 220
>RIP1_ORYSA (Q7XVA8) Putative ripening-related protein 1 precursor| Length = 183 Score = 133 bits (334), Expect = 3e-31 Identities = 67/127 (52%), Positives = 82/127 (64%), Gaps = 11/127 (8%) Frame = -2 Query: 512 CPPCVSWHSTTGVMTLNGFQKGEEGGGPSACDGKYHSNKEMIVALSSRWYGGGRRCGKMI 333 C P + ST VMTLN F G +GGGPS CD YHSN E++VALS+ WY GG RCGK + Sbjct: 59 CSPPTTGSSTDAVMTLNDFDAGGDGGGPSECDEMYHSNTELVVALSTGWYAGGSRCGKSV 118 Query: 332 RITSEQNGRTAQAKVVDECDSSNG----------CKDSIVDASAAVWKALRL-NTDIGEV 186 RI + NGR+ AKVVDECDS G C+ ++VDAS AVW AL + D+GE Sbjct: 119 RINA--NGRSVLAKVVDECDSQRGCDEEHAYQPPCRPNVVDASQAVWDALGITGEDVGEY 176 Query: 185 PVTWTDA 165 +TW+DA Sbjct: 177 DITWSDA 183
>RIP2_ORYSA (Q6H5X0) Putative ripening-related protein 2 precursor| Length = 192 Score = 129 bits (324), Expect = 5e-30 Identities = 67/127 (52%), Positives = 83/127 (65%), Gaps = 11/127 (8%) Frame = -2 Query: 512 CPPCVSWHSTTGVMTLNGFQKGEEGGGPSACDGKYHSNKEMIVALSSRWYGGGRRCGKMI 333 C P + ST VMTLN F+ G +GG PS CDGK+H N E +VALS+ WY GRRC K I Sbjct: 69 CSPATTG-STKAVMTLNDFEAGGDGGDPSECDGKFHKNTERVVALSTGWYANGRRCNKNI 127 Query: 332 RITSEQNGRTAQAKVVDECDSSNG----------CKDSIVDASAAVWKALRL-NTDIGEV 186 RI + NGR+ AKVVDECDS +G C+ ++VDAS AVW ALR+ D+GE Sbjct: 128 RINA--NGRSVLAKVVDECDSLHGCDKEHAYQPPCRPNVVDASQAVWDALRITGEDVGEY 185 Query: 185 PVTWTDA 165 +TW+DA Sbjct: 186 DITWSDA 192
>KIWEL_ACTCH (P84527) Kiwellin (Allergen Act c ?)| Length = 189 Score = 125 bits (314), Expect = 7e-29 Identities = 65/125 (52%), Positives = 82/125 (65%), Gaps = 10/125 (8%) Frame = -2 Query: 509 PPCVSWHSTTGVMTLNGFQKGEEGGGPSACDGKYHSNKEMIVALSSRWYGGGRRCGKMIR 330 PP S ST +T N F +G + GGPS CD YH+N E IVALS+ WY GG RCGKMIR Sbjct: 68 PPVTS--STPAKLTNNDFSEGGDDGGPSECDESYHNNNERIVALSTGWYNGGSRCGKMIR 125 Query: 329 ITSEQNGRTAQAKVVDECDSSNG----------CKDSIVDASAAVWKALRLNTDIGEVPV 180 IT+ NG++ AKVVDECDS +G C+++IVD S AVW AL L+ ++G V + Sbjct: 126 ITA-SNGKSVSAKVVDECDSRHGCDKEHAGQPPCRNNIVDGSNAVWSALGLDKNVGVVDI 184 Query: 179 TWTDA 165 TW+ A Sbjct: 185 TWSMA 189
>RIP5_ORYSA (Q8LN49) Putative ripening-related protein 5 precursor| Length = 276 Score = 108 bits (270), Expect = 9e-24 Identities = 54/106 (50%), Positives = 71/106 (66%), Gaps = 11/106 (10%) Frame = -2 Query: 458 FQKGEEGGGPSACDGKYHSNKEMIVALSSRWYGGGRRCGKMIRIT-SEQNGRTAQAKVVD 282 F+KG++GGGPS CD YHS+ E++VALS+ W+ G RCG +RIT S GR+ AKVVD Sbjct: 60 FEKGKDGGGPSECDNAYHSDGELVVALSTGWFAGTARCGHRVRITASGGGGRSVVAKVVD 119 Query: 281 ECDSSNGCK----------DSIVDASAAVWKALRLNTDIGEVPVTW 174 ECDS +GC ++IVDAS AVW AL L+ ++G +TW Sbjct: 120 ECDSVHGCDGEHNYEAPCGNNIVDASPAVWDALGLDKNVGMEHITW 165
>RIP4_ORYSA (Q9FWU1) Putative ripening-related protein 4 precursor| Length = 377 Score = 108 bits (270), Expect = 9e-24 Identities = 57/119 (47%), Positives = 74/119 (62%), Gaps = 12/119 (10%) Frame = -2 Query: 509 PPCVSWHSTTGVMTLNGFQKGEEGGGPSACDGKYHSNKEMIVALSSRW--YGGGRRCGKM 336 PP S T +TLN F +G +GGG S+CDG++H + M+VALSS W G RC +M Sbjct: 91 PPVSSARPTPATLTLNSFARGGDGGGRSSCDGRFHPDTAMVVALSSGWLRLDGASRCNRM 150 Query: 335 IRITSEQNGRTAQAKVVDECDSSNG----------CKDSIVDASAAVWKALRLNTDIGE 189 IR+ + NGR+A A+VVDECDS NG C + +VD S AVWKAL L+ +GE Sbjct: 151 IRVAA-GNGRSALARVVDECDSVNGCDAEHNFEPPCPNDVVDGSPAVWKALGLDEGVGE 208 Score = 90.5 bits (223), Expect = 2e-18 Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 18/124 (14%) Frame = -2 Query: 488 STTGVMTLNGFQKGEEGGG-PSACDGKYHSNKEMIVALSSRWY---GGGRRCGKMIR--- 330 +T ++TL F GE+ GG P++CD ++H N E++VALSS W GG RRC + IR Sbjct: 246 TTPAILTLKVFDHGEDDGGVPTSCDMRFHRNTELVVALSSGWLRLGGGRRRCHRRIRVFA 305 Query: 329 ITSEQNGRTA-QAKVVDECDSSNGCKD----------SIVDASAAVWKALRLNTDIGEVP 183 + +GR++ A+VVD+CDS NGC++ + V S VW+ L LN +GE Sbjct: 306 VAGAASGRSSVVARVVDDCDSVNGCREEDGFAPPCRNNAVGGSPVVWEKLGLNASVGEFE 365 Query: 182 VTWT 171 V W+ Sbjct: 366 VVWS 369
>RIP3_ORYSA (Q9FWT5) Ripening-related protein 3 precursor| Length = 213 Score = 103 bits (258), Expect = 2e-22 Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 10/128 (7%) Frame = -2 Query: 518 CKCPPCVSWHSTTGVMTLNGFQKGEEGGGPSACDGKYHSNKEMIVALSSRWYGGGRRCGK 339 C P T ++TLN F G +GGG +C G+++ + +++VALS+ W+ G RC K Sbjct: 87 CSPPVAAGGTGTAALLTLNSFADGGDGGGAPSCTGRFYDDGQLVVALSTGWFDGRSRCEK 146 Query: 338 MIRITSEQNGRTAQAKVVDECDSSNG----------CKDSIVDASAAVWKALRLNTDIGE 189 + I + G + A VVDECDS G C+++IVD S AVW AL LN D GE Sbjct: 147 DVVIRA-SGGASVTAMVVDECDSQRGCDSDHNFEPPCRNNIVDGSPAVWDALGLNKDDGE 205 Query: 188 VPVTWTDA 165 +TW+DA Sbjct: 206 AQITWSDA 213
>EXPR3_ARATH (Q9ZV52) Expansin-related protein 3 precursor (AtEXPR3)| (Ath-ExpGamma-1.2) Length = 130 Score = 35.0 bits (79), Expect = 0.12 Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 10/96 (10%) Frame = -2 Query: 428 SACDGKYHSNKEMIVALSSRWYGGGRRCGKMIRITS---------EQNGRTAQAKVVDEC 276 SAC G + ++V + + + GR CG+ R+ GRT KVVD C Sbjct: 40 SACYGT--QRETLVVGVKNNLWQNGRACGRRYRVRCIGATYNFDRACTGRTVDVKVVDFC 97 Query: 275 -DSSNGCKDSIVDASAAVWKALRLNTDIGEVPVTWT 171 + NG + DA + NTD G + V +T Sbjct: 98 REPCNGDLNLSRDAFRVI-----ANTDAGNIRVVYT 128
>WIN1_SOLTU (P09761) Wound-induced protein WIN1 precursor| Length = 200 Score = 31.2 bits (69), Expect = 1.8 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = -2 Query: 359 GGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKD 252 G CGK +R+T+ + G ++VD+C SNG D Sbjct: 134 GRDSCGKCLRVTNTRTGAQTTVRIVDQC--SNGGLD 167
>WIN2_SOLTU (P09762) Wound-induced protein WIN2 precursor| Length = 211 Score = 31.2 bits (69), Expect = 1.8 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = -2 Query: 359 GGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKD 252 G CGK +R+T+ + G ++VD+C SNG D Sbjct: 133 GRDSCGKCLRVTNTRTGAQTTVRIVDQC--SNGGLD 166
>BARW_HORVU (P28814) Barwin| Length = 125 Score = 30.8 bits (68), Expect = 2.3 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = -2 Query: 359 GGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKD 252 G CGK +R+T+ G A++VD+C +NG D Sbjct: 59 GQAACGKCLRVTNPATGAQITARIVDQC--ANGGLD 92
>Y2748_XANCP (Q8P765) UPF0301 protein XCC2748| Length = 188 Score = 30.8 bits (68), Expect = 2.3 Identities = 22/112 (19%), Positives = 52/112 (46%) Frame = -2 Query: 431 PSACDGKYHSNKEMIVALSSRWYGGGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKD 252 P G H + ++ +R + G+ + +T+ ++ +++ + +G ++ Sbjct: 72 PVLSGGPVHPERGFVIHDDARAWDSSLEVGQGVYLTTSRD-------ILEAMAAGDGPRN 124 Query: 251 SIVDASAAVWKALRLNTDIGEVPVTWTDA*SHASIHW*AGADDRKDGSAYRL 96 ++V A W A +L ++GE +W A S A++ + +DR +A R+ Sbjct: 125 ALVALGCAGWGAGQLEFELGE--NSWLTAPSDANVLFDTALEDRWQTAAGRI 174
>WHW2_WHEAT (O64393) Wheatwin2 precursor (Pathogenesis-related protein 4b)| Length = 148 Score = 30.8 bits (68), Expect = 2.3 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = -2 Query: 359 GGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKD 252 G CGK +R+T+ G A++VD+C +NG D Sbjct: 82 GQAACGKCLRVTNPATGAQITARIVDQC--ANGGLD 115
>PR4B_TOBAC (P29063) Pathogenesis-related protein PR-4B precursor| Length = 147 Score = 30.4 bits (67), Expect = 3.0 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = -2 Query: 359 GGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKD 252 G CG+ +R+T+ G A ++VD+C SNG D Sbjct: 82 GQDSCGRCLRVTNTGTGTQATVRIVDQC--SNGGLD 115
>WIN_SOYBN (Q02243) Wound-induced protein (Fragment)| Length = 102 Score = 29.6 bits (65), Expect = 5.2 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -2 Query: 359 GGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKD 252 G CGK +R+T+ G ++VD+C SNG D Sbjct: 22 GRDSCGKCLRVTNTGTGANTIVRIVDQC--SNGGLD 55
>Y2918_XANAC (Q8PIH9) UPF0301 protein XAC2918| Length = 188 Score = 29.3 bits (64), Expect = 6.8 Identities = 21/107 (19%), Positives = 50/107 (46%) Frame = -2 Query: 416 GKYHSNKEMIVALSSRWYGGGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKDSIVDA 237 G H + ++ +R + G+ + +T+ ++ +++ + G ++++V Sbjct: 77 GPVHPERGFVIHDDARDWDSSLEVGQGVYLTTSRD-------ILEAMAAGEGPRNALVAL 129 Query: 236 SAAVWKALRLNTDIGEVPVTWTDA*SHASIHW*AGADDRKDGSAYRL 96 A W A +L ++GE +W A S A++ + +DR +A R+ Sbjct: 130 GCAGWGAGQLEFELGE--NSWLTAPSDANVLFATALEDRWQTAAGRI 174
>API_ACHLY (P15636) Protease 1 precursor (EC 3.4.21.50) (Protease I) (API)| (Lysyl endopeptidase) Length = 653 Score = 29.3 bits (64), Expect = 6.8 Identities = 16/63 (25%), Positives = 28/63 (44%) Frame = -2 Query: 449 GEEGGGPSACDGKYHSNKEMIVALSSRWYGGGRRCGKMIRITSEQNGRTAQAKVVDECDS 270 G+ GGPS+C + + + + W GGG R++ + + A+ +D DS Sbjct: 412 GQLHGGPSSCSATGTNRSDQYGRVFTSWTGGGAAAS---RLSDWLDPASTGAQFIDGLDS 468 Query: 269 SNG 261 G Sbjct: 469 GGG 471
>WHW1_WHEAT (O64392) Wheatwin1 precursor (Pathogenesis-related protein 4a)| (Protein 0.14) Length = 146 Score = 29.3 bits (64), Expect = 6.8 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = -2 Query: 359 GGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKD 252 G CGK +++T+ G A++VD+C +NG D Sbjct: 80 GQASCGKCLQVTNPATGAQITARIVDQC--ANGGLD 113
>PR4A_TOBAC (P29062) Pathogenesis-related protein PR-4A precursor| Length = 147 Score = 28.9 bits (63), Expect = 8.9 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = -2 Query: 359 GGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKD 252 G CG+ +R+T+ G ++VD+C SNG D Sbjct: 82 GQDSCGRCLRVTNTGTGTQTTVRIVDQC--SNGGLD 115 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,537,307 Number of Sequences: 219361 Number of extensions: 1105941 Number of successful extensions: 2735 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 2661 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2713 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)