ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4p17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RIP6_ORYSA (Q7XD66) Putative ripening-related protein 6 precursor 162 7e-40
2RIP7_ORYSA (Q7XD65) Putative ripening-related protein 7 precursor 147 2e-35
3GRI22_VITVI (Q9M4H4) Ripening-related protein grip22 precursor 142 7e-34
4RIP1_ORYSA (Q7XVA8) Putative ripening-related protein 1 precursor 133 3e-31
5RIP2_ORYSA (Q6H5X0) Putative ripening-related protein 2 precursor 129 5e-30
6KIWEL_ACTCH (P84527) Kiwellin (Allergen Act c ?) 125 7e-29
7RIP5_ORYSA (Q8LN49) Putative ripening-related protein 5 precursor 108 9e-24
8RIP4_ORYSA (Q9FWU1) Putative ripening-related protein 4 precursor 108 9e-24
9RIP3_ORYSA (Q9FWT5) Ripening-related protein 3 precursor 103 2e-22
10EXPR3_ARATH (Q9ZV52) Expansin-related protein 3 precursor (AtEXP... 35 0.12
11WIN1_SOLTU (P09761) Wound-induced protein WIN1 precursor 31 1.8
12WIN2_SOLTU (P09762) Wound-induced protein WIN2 precursor 31 1.8
13BARW_HORVU (P28814) Barwin 31 2.3
14Y2748_XANCP (Q8P765) UPF0301 protein XCC2748 31 2.3
15WHW2_WHEAT (O64393) Wheatwin2 precursor (Pathogenesis-related pr... 31 2.3
16PR4B_TOBAC (P29063) Pathogenesis-related protein PR-4B precursor 30 3.0
17WIN_SOYBN (Q02243) Wound-induced protein (Fragment) 30 5.2
18Y2918_XANAC (Q8PIH9) UPF0301 protein XAC2918 29 6.8
19API_ACHLY (P15636) Protease 1 precursor (EC 3.4.21.50) (Protease... 29 6.8
20WHW1_WHEAT (O64392) Wheatwin1 precursor (Pathogenesis-related pr... 29 6.8
21PR4A_TOBAC (P29062) Pathogenesis-related protein PR-4A precursor 29 8.9

>RIP6_ORYSA (Q7XD66) Putative ripening-related protein 6 precursor|
          Length = 167

 Score =  162 bits (409), Expect = 7e-40
 Identities = 74/115 (64%), Positives = 93/115 (80%), Gaps = 1/115 (0%)
 Frame = -2

Query: 506 PCVSWHSTTGVMTLNGFQKGEEGGGPSACDGKYHSNKEMIVALSSRWYGGGRRCGKMIRI 327
           P VS   T  VMT+NGF++GE+GGGP+ACDG+YHS++ ++ ALS+ W+ GGRRC + IRI
Sbjct: 53  PAVSEDGTPAVMTVNGFEEGEDGGGPAACDGRYHSDRSLVAALSTGWFAGGRRCHRGIRI 112

Query: 326 TSEQNGRTAQAKVVDECDSSN-GCKDSIVDASAAVWKALRLNTDIGEVPVTWTDA 165
           TS QNGR+  A VVDECDS + GCKD IVD SAAVW AL L+T++GEVPVTW+DA
Sbjct: 113 TSRQNGRSVVATVVDECDSRHGGCKDDIVDTSAAVWSALGLDTNVGEVPVTWSDA 167



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>RIP7_ORYSA (Q7XD65) Putative ripening-related protein 7 precursor|
          Length = 162

 Score =  147 bits (371), Expect = 2e-35
 Identities = 68/111 (61%), Positives = 85/111 (76%), Gaps = 8/111 (7%)
 Frame = -2

Query: 476 VMTLNGFQKGEEGGGPSACDGKYHSNKEMIVALSSRWYGGGRRCGKMIRITSEQNG---- 309
           VMT+NGF+KGE+GGGP+ACDG YHS+ E+IVALS+ W+ GGRRC + IRIT  ++G    
Sbjct: 51  VMTVNGFEKGEDGGGPAACDGHYHSDGELIVALSTEWFAGGRRCHRRIRITPSEHGRRGG 110

Query: 308 ----RTAQAKVVDECDSSNGCKDSIVDASAAVWKALRLNTDIGEVPVTWTD 168
               R  +A VVDECDS  GCKD +VD+S AVW+AL L+TD GEV VTW+D
Sbjct: 111 GGGRRAVEATVVDECDSRRGCKDDVVDSSPAVWRALGLDTDSGEVRVTWSD 161



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>GRI22_VITVI (Q9M4H4) Ripening-related protein grip22 precursor|
          Length = 220

 Score =  142 bits (357), Expect = 7e-34
 Identities = 75/125 (60%), Positives = 87/125 (69%), Gaps = 10/125 (8%)
 Frame = -2

Query: 509 PPCVSWHSTTGVMTLNGFQKGEEGGGPSACDGKYHSNKEMIVALSSRWYGGGRRCGKMIR 330
           PP  S  ST  V+T N F+KG +GGGPSACD KYH N E IVALS+ WY GG RCGKMIR
Sbjct: 99  PPITS--STPAVLTNNNFEKGGDGGGPSACDNKYHDNSERIVALSTGWYNGGSRCGKMIR 156

Query: 329 ITSEQNGRTAQAKVVDECDSSNG----------CKDSIVDASAAVWKALRLNTDIGEVPV 180
           IT+ QNGR+  AKVVDECDS +G          C ++IVD S AVW AL L+ +IGEV V
Sbjct: 157 ITA-QNGRSVLAKVVDECDSMHGCDKEHAGQPPCDNNIVDGSNAVWNALGLDINIGEVDV 215

Query: 179 TWTDA 165
           TW+ A
Sbjct: 216 TWSMA 220



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>RIP1_ORYSA (Q7XVA8) Putative ripening-related protein 1 precursor|
          Length = 183

 Score =  133 bits (334), Expect = 3e-31
 Identities = 67/127 (52%), Positives = 82/127 (64%), Gaps = 11/127 (8%)
 Frame = -2

Query: 512 CPPCVSWHSTTGVMTLNGFQKGEEGGGPSACDGKYHSNKEMIVALSSRWYGGGRRCGKMI 333
           C P  +  ST  VMTLN F  G +GGGPS CD  YHSN E++VALS+ WY GG RCGK +
Sbjct: 59  CSPPTTGSSTDAVMTLNDFDAGGDGGGPSECDEMYHSNTELVVALSTGWYAGGSRCGKSV 118

Query: 332 RITSEQNGRTAQAKVVDECDSSNG----------CKDSIVDASAAVWKALRL-NTDIGEV 186
           RI +  NGR+  AKVVDECDS  G          C+ ++VDAS AVW AL +   D+GE 
Sbjct: 119 RINA--NGRSVLAKVVDECDSQRGCDEEHAYQPPCRPNVVDASQAVWDALGITGEDVGEY 176

Query: 185 PVTWTDA 165
            +TW+DA
Sbjct: 177 DITWSDA 183



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>RIP2_ORYSA (Q6H5X0) Putative ripening-related protein 2 precursor|
          Length = 192

 Score =  129 bits (324), Expect = 5e-30
 Identities = 67/127 (52%), Positives = 83/127 (65%), Gaps = 11/127 (8%)
 Frame = -2

Query: 512 CPPCVSWHSTTGVMTLNGFQKGEEGGGPSACDGKYHSNKEMIVALSSRWYGGGRRCGKMI 333
           C P  +  ST  VMTLN F+ G +GG PS CDGK+H N E +VALS+ WY  GRRC K I
Sbjct: 69  CSPATTG-STKAVMTLNDFEAGGDGGDPSECDGKFHKNTERVVALSTGWYANGRRCNKNI 127

Query: 332 RITSEQNGRTAQAKVVDECDSSNG----------CKDSIVDASAAVWKALRL-NTDIGEV 186
           RI +  NGR+  AKVVDECDS +G          C+ ++VDAS AVW ALR+   D+GE 
Sbjct: 128 RINA--NGRSVLAKVVDECDSLHGCDKEHAYQPPCRPNVVDASQAVWDALRITGEDVGEY 185

Query: 185 PVTWTDA 165
            +TW+DA
Sbjct: 186 DITWSDA 192



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>KIWEL_ACTCH (P84527) Kiwellin (Allergen Act c ?)|
          Length = 189

 Score =  125 bits (314), Expect = 7e-29
 Identities = 65/125 (52%), Positives = 82/125 (65%), Gaps = 10/125 (8%)
 Frame = -2

Query: 509 PPCVSWHSTTGVMTLNGFQKGEEGGGPSACDGKYHSNKEMIVALSSRWYGGGRRCGKMIR 330
           PP  S  ST   +T N F +G + GGPS CD  YH+N E IVALS+ WY GG RCGKMIR
Sbjct: 68  PPVTS--STPAKLTNNDFSEGGDDGGPSECDESYHNNNERIVALSTGWYNGGSRCGKMIR 125

Query: 329 ITSEQNGRTAQAKVVDECDSSNG----------CKDSIVDASAAVWKALRLNTDIGEVPV 180
           IT+  NG++  AKVVDECDS +G          C+++IVD S AVW AL L+ ++G V +
Sbjct: 126 ITA-SNGKSVSAKVVDECDSRHGCDKEHAGQPPCRNNIVDGSNAVWSALGLDKNVGVVDI 184

Query: 179 TWTDA 165
           TW+ A
Sbjct: 185 TWSMA 189



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>RIP5_ORYSA (Q8LN49) Putative ripening-related protein 5 precursor|
          Length = 276

 Score =  108 bits (270), Expect = 9e-24
 Identities = 54/106 (50%), Positives = 71/106 (66%), Gaps = 11/106 (10%)
 Frame = -2

Query: 458 FQKGEEGGGPSACDGKYHSNKEMIVALSSRWYGGGRRCGKMIRIT-SEQNGRTAQAKVVD 282
           F+KG++GGGPS CD  YHS+ E++VALS+ W+ G  RCG  +RIT S   GR+  AKVVD
Sbjct: 60  FEKGKDGGGPSECDNAYHSDGELVVALSTGWFAGTARCGHRVRITASGGGGRSVVAKVVD 119

Query: 281 ECDSSNGCK----------DSIVDASAAVWKALRLNTDIGEVPVTW 174
           ECDS +GC           ++IVDAS AVW AL L+ ++G   +TW
Sbjct: 120 ECDSVHGCDGEHNYEAPCGNNIVDASPAVWDALGLDKNVGMEHITW 165



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>RIP4_ORYSA (Q9FWU1) Putative ripening-related protein 4 precursor|
          Length = 377

 Score =  108 bits (270), Expect = 9e-24
 Identities = 57/119 (47%), Positives = 74/119 (62%), Gaps = 12/119 (10%)
 Frame = -2

Query: 509 PPCVSWHSTTGVMTLNGFQKGEEGGGPSACDGKYHSNKEMIVALSSRW--YGGGRRCGKM 336
           PP  S   T   +TLN F +G +GGG S+CDG++H +  M+VALSS W    G  RC +M
Sbjct: 91  PPVSSARPTPATLTLNSFARGGDGGGRSSCDGRFHPDTAMVVALSSGWLRLDGASRCNRM 150

Query: 335 IRITSEQNGRTAQAKVVDECDSSNG----------CKDSIVDASAAVWKALRLNTDIGE 189
           IR+ +  NGR+A A+VVDECDS NG          C + +VD S AVWKAL L+  +GE
Sbjct: 151 IRVAA-GNGRSALARVVDECDSVNGCDAEHNFEPPCPNDVVDGSPAVWKALGLDEGVGE 208



 Score = 90.5 bits (223), Expect = 2e-18
 Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 18/124 (14%)
 Frame = -2

Query: 488 STTGVMTLNGFQKGEEGGG-PSACDGKYHSNKEMIVALSSRWY---GGGRRCGKMIR--- 330
           +T  ++TL  F  GE+ GG P++CD ++H N E++VALSS W    GG RRC + IR   
Sbjct: 246 TTPAILTLKVFDHGEDDGGVPTSCDMRFHRNTELVVALSSGWLRLGGGRRRCHRRIRVFA 305

Query: 329 ITSEQNGRTA-QAKVVDECDSSNGCKD----------SIVDASAAVWKALRLNTDIGEVP 183
           +    +GR++  A+VVD+CDS NGC++          + V  S  VW+ L LN  +GE  
Sbjct: 306 VAGAASGRSSVVARVVDDCDSVNGCREEDGFAPPCRNNAVGGSPVVWEKLGLNASVGEFE 365

Query: 182 VTWT 171
           V W+
Sbjct: 366 VVWS 369



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>RIP3_ORYSA (Q9FWT5) Ripening-related protein 3 precursor|
          Length = 213

 Score =  103 bits (258), Expect = 2e-22
 Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
 Frame = -2

Query: 518 CKCPPCVSWHSTTGVMTLNGFQKGEEGGGPSACDGKYHSNKEMIVALSSRWYGGGRRCGK 339
           C  P       T  ++TLN F  G +GGG  +C G+++ + +++VALS+ W+ G  RC K
Sbjct: 87  CSPPVAAGGTGTAALLTLNSFADGGDGGGAPSCTGRFYDDGQLVVALSTGWFDGRSRCEK 146

Query: 338 MIRITSEQNGRTAQAKVVDECDSSNG----------CKDSIVDASAAVWKALRLNTDIGE 189
            + I +   G +  A VVDECDS  G          C+++IVD S AVW AL LN D GE
Sbjct: 147 DVVIRA-SGGASVTAMVVDECDSQRGCDSDHNFEPPCRNNIVDGSPAVWDALGLNKDDGE 205

Query: 188 VPVTWTDA 165
             +TW+DA
Sbjct: 206 AQITWSDA 213



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>EXPR3_ARATH (Q9ZV52) Expansin-related protein 3 precursor (AtEXPR3)|
           (Ath-ExpGamma-1.2)
          Length = 130

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 10/96 (10%)
 Frame = -2

Query: 428 SACDGKYHSNKEMIVALSSRWYGGGRRCGKMIRITS---------EQNGRTAQAKVVDEC 276
           SAC G     + ++V + +  +  GR CG+  R+              GRT   KVVD C
Sbjct: 40  SACYGT--QRETLVVGVKNNLWQNGRACGRRYRVRCIGATYNFDRACTGRTVDVKVVDFC 97

Query: 275 -DSSNGCKDSIVDASAAVWKALRLNTDIGEVPVTWT 171
            +  NG  +   DA   +      NTD G + V +T
Sbjct: 98  REPCNGDLNLSRDAFRVI-----ANTDAGNIRVVYT 128



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>WIN1_SOLTU (P09761) Wound-induced protein WIN1 precursor|
          Length = 200

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 359 GGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKD 252
           G   CGK +R+T+ + G     ++VD+C  SNG  D
Sbjct: 134 GRDSCGKCLRVTNTRTGAQTTVRIVDQC--SNGGLD 167



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>WIN2_SOLTU (P09762) Wound-induced protein WIN2 precursor|
          Length = 211

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 359 GGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKD 252
           G   CGK +R+T+ + G     ++VD+C  SNG  D
Sbjct: 133 GRDSCGKCLRVTNTRTGAQTTVRIVDQC--SNGGLD 166



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>BARW_HORVU (P28814) Barwin|
          Length = 125

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 359 GGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKD 252
           G   CGK +R+T+   G    A++VD+C  +NG  D
Sbjct: 59  GQAACGKCLRVTNPATGAQITARIVDQC--ANGGLD 92



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>Y2748_XANCP (Q8P765) UPF0301 protein XCC2748|
          Length = 188

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 22/112 (19%), Positives = 52/112 (46%)
 Frame = -2

Query: 431 PSACDGKYHSNKEMIVALSSRWYGGGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKD 252
           P    G  H  +  ++   +R +      G+ + +T+ ++       +++   + +G ++
Sbjct: 72  PVLSGGPVHPERGFVIHDDARAWDSSLEVGQGVYLTTSRD-------ILEAMAAGDGPRN 124

Query: 251 SIVDASAAVWKALRLNTDIGEVPVTWTDA*SHASIHW*AGADDRKDGSAYRL 96
           ++V    A W A +L  ++GE   +W  A S A++ +    +DR   +A R+
Sbjct: 125 ALVALGCAGWGAGQLEFELGE--NSWLTAPSDANVLFDTALEDRWQTAAGRI 174



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>WHW2_WHEAT (O64393) Wheatwin2 precursor (Pathogenesis-related protein 4b)|
          Length = 148

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 359 GGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKD 252
           G   CGK +R+T+   G    A++VD+C  +NG  D
Sbjct: 82  GQAACGKCLRVTNPATGAQITARIVDQC--ANGGLD 115



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>PR4B_TOBAC (P29063) Pathogenesis-related protein PR-4B precursor|
          Length = 147

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 359 GGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKD 252
           G   CG+ +R+T+   G  A  ++VD+C  SNG  D
Sbjct: 82  GQDSCGRCLRVTNTGTGTQATVRIVDQC--SNGGLD 115



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>WIN_SOYBN (Q02243) Wound-induced protein (Fragment)|
          Length = 102

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 359 GGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKD 252
           G   CGK +R+T+   G     ++VD+C  SNG  D
Sbjct: 22  GRDSCGKCLRVTNTGTGANTIVRIVDQC--SNGGLD 55



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>Y2918_XANAC (Q8PIH9) UPF0301 protein XAC2918|
          Length = 188

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 21/107 (19%), Positives = 50/107 (46%)
 Frame = -2

Query: 416 GKYHSNKEMIVALSSRWYGGGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKDSIVDA 237
           G  H  +  ++   +R +      G+ + +T+ ++       +++   +  G ++++V  
Sbjct: 77  GPVHPERGFVIHDDARDWDSSLEVGQGVYLTTSRD-------ILEAMAAGEGPRNALVAL 129

Query: 236 SAAVWKALRLNTDIGEVPVTWTDA*SHASIHW*AGADDRKDGSAYRL 96
             A W A +L  ++GE   +W  A S A++ +    +DR   +A R+
Sbjct: 130 GCAGWGAGQLEFELGE--NSWLTAPSDANVLFATALEDRWQTAAGRI 174



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>API_ACHLY (P15636) Protease 1 precursor (EC 3.4.21.50) (Protease I) (API)|
           (Lysyl endopeptidase)
          Length = 653

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 16/63 (25%), Positives = 28/63 (44%)
 Frame = -2

Query: 449 GEEGGGPSACDGKYHSNKEMIVALSSRWYGGGRRCGKMIRITSEQNGRTAQAKVVDECDS 270
           G+  GGPS+C     +  +    + + W GGG       R++   +  +  A+ +D  DS
Sbjct: 412 GQLHGGPSSCSATGTNRSDQYGRVFTSWTGGGAAAS---RLSDWLDPASTGAQFIDGLDS 468

Query: 269 SNG 261
             G
Sbjct: 469 GGG 471



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>WHW1_WHEAT (O64392) Wheatwin1 precursor (Pathogenesis-related protein 4a)|
           (Protein 0.14)
          Length = 146

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 359 GGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKD 252
           G   CGK +++T+   G    A++VD+C  +NG  D
Sbjct: 80  GQASCGKCLQVTNPATGAQITARIVDQC--ANGGLD 113



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>PR4A_TOBAC (P29062) Pathogenesis-related protein PR-4A precursor|
          Length = 147

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 359 GGRRCGKMIRITSEQNGRTAQAKVVDECDSSNGCKD 252
           G   CG+ +R+T+   G     ++VD+C  SNG  D
Sbjct: 82  GQDSCGRCLRVTNTGTGTQTTVRIVDQC--SNGGLD 115


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,537,307
Number of Sequences: 219361
Number of extensions: 1105941
Number of successful extensions: 2735
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2713
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3927707336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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