Clone Information

BLAST Search Result

Clone Name	rbags5e23
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL5A_ORYSA (P49625) 60S ribosomal protein L5-1	220	2e-57
2	RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2	219	4e-57
3	RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5	191	1e-48
4	RL5_ARATH (P49227) 60S ribosomal protein L5	181	9e-46
5	RL5_SOLME (P93779) 60S ribosomal protein L5 (Fragment)	162	6e-40
6	RL5_BOMMO (O76190) 60S ribosomal protein L5	116	5e-26
7	RL5_STYCL (Q26481) 60S ribosomal protein L5	116	5e-26
8	RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)	111	1e-24
9	RL5_HELAN (O65353) 60S ribosomal protein L5	111	1e-24
10	RL5_CAEEL (P49405) 60S ribosomal protein L5	110	3e-24
11	RL5_DUNSA (O22608) 60S ribosomal protein L5	109	4e-24
12	RL5B_SCHPO (O74306) 60S ribosomal protein L5-B	107	2e-23
13	RL5B_XENLA (P15126) 60S ribosomal protein L5-B	105	8e-23
14	RL5A_SCHPO (P52822) 60S ribosomal protein L5-A	105	8e-23
15	RL5A_XENLA (P15125) 60S ribosomal protein L5-A	104	1e-22
16	RL5_MACFA (Q4R5M0) 60S ribosomal protein L5	104	2e-22
17	RL5_HUMAN (P46777) 60S ribosomal protein L5	104	2e-22
18	RL5_RAT (P09895) 60S ribosomal protein L5	103	2e-22
19	RL5_MOUSE (P47962) 60S ribosomal protein L5	103	2e-22
20	RL5_CHICK (P22451) 60S ribosomal protein L5	103	3e-22
21	RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosoma...	97	4e-20
22	RL5_ANOGA (O44248) 60S ribosomal protein L5	96	8e-20
23	RL18_METKA (Q8TZA5) 50S ribosomal protein L18P	43	5e-04
24	RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P	42	0.001
25	RL18_METMP (Q6LXD4) 50S ribosomal protein L18P	40	0.003
26	RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P	40	0.006
27	RL18_SULTO (Q975J9) 50S ribosomal protein L18P	39	0.012
28	RL18_PYRHO (O59438) 50S ribosomal protein L18P	38	0.016
29	RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)	38	0.016
30	RL18_METJA (P54044) 50S ribosomal protein L18P	38	0.021
31	RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P	38	0.021
32	RL18_METVA (P14033) 50S ribosomal protein L18P	34	0.30
33	ZN674_HUMAN (Q2M3X9) Zinc finger protein 674	33	0.40
34	RL18_METTH (O26130) 50S ribosomal protein L18P	32	1.1
35	RL18_SULAC (O05640) 50S ribosomal protein L18P	32	1.5
36	SRYD_DROME (P07664) Serendipity locus protein delta	31	2.0
37	UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstrea...	30	3.3
38	CTR3_MOUSE (P70423) Cationic amino acid transporter 3 (CAT-3) (S...	30	4.4
39	SCNNB_RAT (P37090) Amiloride-sensitive sodium channel beta-subun...	30	4.4
40	NCKP1_ARATH (Q5S2C4) Protein NAP1 (Nck-associated protein 1) (At...	30	4.4
41	ODO1_RICCN (Q92J42) 2-oxoglutarate dehydrogenase E1 component (E...	30	5.7
42	RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)	30	5.7
43	VTA1_YEAST (Q06263) Vacuolar protein sorting-associated protein ...	30	5.7
44	CTR3_RAT (O08812) Cationic amino acid transporter 3 (CAT-3) (Sol...	29	7.5
45	ZN622_CHICK (Q90Y35) Zinc finger protein 622 (Zn-finger protein ...	29	7.5
46	PTPR2_MOUSE (P80560) Receptor-type tyrosine-protein phosphatase ...	29	7.5
47	GIDA_BORGA (Q662I6) tRNA uridine 5-carboxymethylaminomethyl modi...	29	7.5
48	UBF1B_XENLA (P25980) Nucleolar transcription factor 1-B (Upstrea...	29	7.5
49	NCKP1_ORYSA (Q6ZBH9) Probable protein NAP1 (Nck-associated prote...	29	9.7
50	Y132_BUCAP (Q8KA02) Hypothetical protein BUsg132	29	9.7
51	Y1664_METJA (Q59058) Hypothetical protein MJ1664	29	9.7
52	TREF1_HUMAN (Q96PN7) Transcriptional-regulating factor 1 (Transc...	29	9.7
53	OAF1_YEAST (P39720) Oleate-activated transcription factor 1	29	9.7

>RL5A_ORYSA (P49625) 60S ribosomal protein L5-1|
          Length = 304

 Score =  220 bits (561), Expect = 2e-57
 Identities = 105/123 (85%), Positives = 115/123 (93%)
 Frame = -2

Query: 541 DIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGI 362
           DIPHSDKRFAGFKKDEK LD++IHRKYIYGGHVADYMRS+A+EEPEK+Q HFSEY+KKGI
Sbjct: 172 DIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGI 231

Query: 361 SADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNS 182
            AD MEA+YKKVHAAIRADP+MAKSTK  P THKRYN KKLTYE+RKASLVERLNALN+S
Sbjct: 232 DADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSS 291

Query: 181 AGA 173
           AGA
Sbjct: 292 AGA 294

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>RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2|
          Length = 304

 Score =  219 bits (558), Expect = 4e-57
 Identities = 104/123 (84%), Positives = 115/123 (93%)
 Frame = -2

Query: 541 DIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGI 362
           DIPHSDKRFAGFKKDEK LD++IHRKYIYGGHVADYMRS+A+EEPEK+Q HFSEY+KKGI
Sbjct: 172 DIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGI 231

Query: 361 SADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNS 182
            AD ME++YKKVHAAIRADP+MAKSTK  P THKRYN KKLTYE+RKASLVERLNALN+S
Sbjct: 232 DADGMESLYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSS 291

Query: 181 AGA 173
           AGA
Sbjct: 292 AGA 294

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>RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5|
          Length = 302

 Score =  191 bits (485), Expect = 1e-48
 Identities = 89/121 (73%), Positives = 105/121 (86%)
 Frame = -2

Query: 541 DIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGI 362
           DIPHSDKRFAG+ K+ + LD E+HRKYI+GGHVA YMR+L ++EPEKYQ+HFSEYIKKGI
Sbjct: 171 DIPHSDKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGI 230

Query: 361 SADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNS 182
            AD++E +YKKVHAAIRA+P   KS KP PK HKRYN KKLTY+ERKA LVERLNALN++
Sbjct: 231 EADELEGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSA 290

Query: 181 A 179
           A
Sbjct: 291 A 291

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>RL5_ARATH (P49227) 60S ribosomal protein L5|
          Length = 301

 Score =  181 bits (460), Expect = 9e-46
 Identities = 84/122 (68%), Positives = 100/122 (81%)
 Frame = -2

Query: 541 DIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGI 362
           DIPHSDKRFAGF K+ K LDAEIHR YIYGGHV++YM+ L ++EPEK QTHFS YIKKG+
Sbjct: 171 DIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGV 230

Query: 361 SADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNS 182
            A+ +E +YKKVHAAIRA+P+  K+ K APK HKRYN KKLTYEERK  L+ER+ ALN +
Sbjct: 231 EAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGA 290

Query: 181 AG 176
            G
Sbjct: 291 GG 292

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>RL5_SOLME (P93779) 60S ribosomal protein L5 (Fragment)|
          Length = 121

 Score =  162 bits (410), Expect = 6e-40
 Identities = 77/109 (70%), Positives = 88/109 (80%)
 Frame = -2

Query: 502 KDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVH 323
           KD K LDAE+HRKYIYGGHVA YM  L ++EPEKYQ+HFS YIK  ++ D++E +YKKVH
Sbjct: 3   KDSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVH 62

Query: 322 AAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNSAG 176
           AAIR DPS  KS K  PKTHKRYN KKLTYEERKA L+ERLNALN + G
Sbjct: 63  AAIRPDPSPKKSQKQPPKTHKRYNLKKLTYEERKAKLIERLNALNAAGG 111

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>RL5_BOMMO (O76190) 60S ribosomal protein L5|
          Length = 299

 Score =  116 bits (290), Expect = 5e-26
 Identities = 59/124 (47%), Positives = 82/124 (66%), Gaps = 8/124 (6%)
 Frame = -2

Query: 541 DIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGI 362
           ++PHS KRF G+  + K  +AE+HR +I+G HVA+YMRSL  ++ + ++  FS+YIK G+
Sbjct: 172 NVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGV 231

Query: 361 SADDMEAVYKKVHAAIRADPS-MAKSTKPAPKTHKRYNPKKLTYEER-------KASLVE 206
           +AD +EA+YKK H AIRADPS   K  K      KR+N +KLT  ER       KAS ++
Sbjct: 232 TADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIK 291

Query: 205 RLNA 194
           RL A
Sbjct: 292 RLQA 295

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>RL5_STYCL (Q26481) 60S ribosomal protein L5|
          Length = 294

 Score =  116 bits (290), Expect = 5e-26
 Identities = 53/107 (49%), Positives = 76/107 (71%)
 Frame = -2

Query: 541 DIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGI 362
           DIPHS KRF G+  +     AE+HR +I+GGHV++YM+ L +E+ E ++  FS+YIK G+
Sbjct: 171 DIPHSTKRFPGYDDESGDFSAEVHRSHIFGGHVSNYMKELEEEDEEAFKRQFSQYIKHGV 230

Query: 361 SADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERK 221
           +AD +E +Y K HAAIR DP+  K T  A KT KR+N KK+T+ +R+
Sbjct: 231 TADTVEEMYTKAHAAIREDPTPKKKTDFAGKT-KRWNRKKMTFSQRR 276

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>RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)|
          Length = 301

 Score =  111 bits (278), Expect = 1e-24
 Identities = 56/126 (44%), Positives = 81/126 (64%), Gaps = 8/126 (6%)
 Frame = -2

Query: 538 IPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGIS 359
           IPHS+ RF G+  + + LDAE  +KYI+GGHVA+YM +LAD++ E+Y++ F+ YI+  + 
Sbjct: 176 IPHSENRFPGYDMESEELDAETLKKYIFGGHVAEYMETLADDDEERYKSQFNRYIEDDLE 235

Query: 358 ADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHK--------RYNPKKLTYEERKASLVER 203
           AD +E +Y + HAAIR DP   K+   APK  K        +Y   KLT E+R A + ER
Sbjct: 236 ADGLEDLYAEAHAAIREDP-FKKAESEAPKKTKEEWKAESLKYKKSKLTREQRAAGVQER 294

Query: 202 LNALNN 185
           + AL +
Sbjct: 295 IAALRS 300

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>RL5_HELAN (O65353) 60S ribosomal protein L5|
          Length = 297

 Score =  111 bits (277), Expect = 1e-24
 Identities = 55/111 (49%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
 Frame = -2

Query: 541 DIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGI 362
           +I HS KRF GF  + K  +A++HR++I+G HVA+YMR LA+E+ E Y+  FS+YIK G+
Sbjct: 172 NILHSTKRFPGFDSESKEFNADVHRQHIFGQHVAEYMRQLAEEDDEAYKRQFSQYIKLGL 231

Query: 361 SADDMEAVYKKVHAAIRADPSMAKSTKPA-PKTHKRYNPKKLTYEERKASL 212
           +AD +E +YKK H AIRA+P+     K A PK  KR+  KKLT E+R+  +
Sbjct: 232 NADAIEGLYKKAHEAIRANPARKTVAKKAHPK--KRWTEKKLTREQRQGKV 280

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>RL5_CAEEL (P49405) 60S ribosomal protein L5|
          Length = 293

 Score =  110 bits (274), Expect = 3e-24
 Identities = 52/113 (46%), Positives = 78/113 (69%)
 Frame = -2

Query: 541 DIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGI 362
           ++PHS+ RF GF ++ K  +AE HR  I G HVADYM  L +E+ ++Y+  FS+++  G+
Sbjct: 171 NVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGL 230

Query: 361 SADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 203
           +AD++ A Y+KVH+AIRAD S A   K A K  KR+  K+LTY+ERK  + ++
Sbjct: 231 NADNLVATYQKVHSAIRADASPA--AKKAAKPSKRHTAKRLTYDERKQRVADK 281

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>RL5_DUNSA (O22608) 60S ribosomal protein L5|
          Length = 271

 Score =  109 bits (273), Expect = 4e-24
 Identities = 49/99 (49%), Positives = 69/99 (69%)
 Frame = -2

Query: 541 DIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGI 362
           DIPH++KRF G+   +K LD E+ +KYIYGGHVA+Y  ++ +EEPEKYQ HFS Y++  I
Sbjct: 172 DIPHNEKRFVGYA--DKKLDTEVLQKYIYGGHVAEYQETMQEEEPEKYQAHFSSYVENEI 229

Query: 361 SADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPK 245
             D +E +YK+VHA IR +P   K  +  P   KR++P+
Sbjct: 230 EPDGIEDMYKEVHAKIRENPCPPKKERTKPADAKRWSPQ 268

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>RL5B_SCHPO (O74306) 60S ribosomal protein L5-B|
          Length = 294

 Score =  107 bits (267), Expect = 2e-23
 Identities = 61/126 (48%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
 Frame = -2

Query: 538 IPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGIS 359
           IPHS  RF GF  + + LD E  RKYIYGGHVA+YM  L D++ E+YQ  FS  I  GI 
Sbjct: 173 IPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIE 232

Query: 358 ADDMEAVYKKVHAAIRADPSMAKSTKPA---PKTHKRYNPKKLTYEERKASLVERLNALN 188
           +D +E +Y + +A IR DPS  KS K A        +Y  +KLT EERK    ER NA  
Sbjct: 233 SDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKYTQRKLTAEERK----ERFNAKV 288

Query: 187 NSAGAA 170
             AG A
Sbjct: 289 IEAGRA 294

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>RL5B_XENLA (P15126) 60S ribosomal protein L5-B|
          Length = 295

 Score =  105 bits (262), Expect = 8e-23
 Identities = 48/112 (42%), Positives = 74/112 (66%)
 Frame = -2

Query: 538 IPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGIS 359
           IPHS KRF G+  + K  + E+HRK+I+  ++A+YMR L +E+ + Y+  FS+YIK G++
Sbjct: 172 IPHSTKRFPGYDSESKEFNPEVHRKHIFAQNIAEYMRLLMEEDEDAYKKQFSQYIKNGVA 231

Query: 358 ADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 203
           AD +E +YKK HA IR +P   K  K   K  KR+N  KL+ E++K  + ++
Sbjct: 232 ADQLEDIYKKAHAGIRENPVHEKKPKKEVK-KKRWNRAKLSLEQKKDRVAQK 282

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>RL5A_SCHPO (P52822) 60S ribosomal protein L5-A|
          Length = 294

 Score =  105 bits (262), Expect = 8e-23
 Identities = 60/126 (47%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
 Frame = -2

Query: 538 IPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGIS 359
           IPHS  RF GF  + + LD E  RKYIYGGHVA+YM  L D++ E+YQ  FS  I  GI 
Sbjct: 173 IPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIE 232

Query: 358 ADDMEAVYKKVHAAIRADPSMAKSTKPA---PKTHKRYNPKKLTYEERKASLVERLNALN 188
           +D +E +Y + +A IR DPS  KS K A        ++  +KLT EERK    ER NA  
Sbjct: 233 SDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKHTQRKLTAEERK----ERFNAKV 288

Query: 187 NSAGAA 170
             AG A
Sbjct: 289 IEAGRA 294

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>RL5A_XENLA (P15125) 60S ribosomal protein L5-A|
          Length = 295

 Score =  104 bits (260), Expect = 1e-22
 Identities = 49/112 (43%), Positives = 74/112 (66%)
 Frame = -2

Query: 538 IPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGIS 359
           IPHS KRF G+  + K  + E+HRK+I+  +VA+YMR L +E+ + Y+  FS+YIK G++
Sbjct: 172 IPHSTKRFPGYDSESKEFNPEVHRKHIFAQNVAEYMRLLMEEDEDAYKKQFSQYIKNGVT 231

Query: 358 ADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 203
           AD +E +YKK HA IR +P   K  K   K  KR+N  KL+ E++K  + ++
Sbjct: 232 ADQVEDLYKKAHAGIRENPVHEKKPKKEVK-KKRWNRAKLSLEQKKDRVAQK 282

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>RL5_MACFA (Q4R5M0) 60S ribosomal protein L5|
          Length = 296

 Score =  104 bits (259), Expect = 2e-22
 Identities = 50/112 (44%), Positives = 73/112 (65%)
 Frame = -2

Query: 538 IPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGIS 359
           IPHS KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  ++
Sbjct: 172 IPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVT 231

Query: 358 ADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 203
            D ME +YKK HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 232 PDMMEEMYKKAHAAIRENPVYEKKPKKEVK-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5_HUMAN (P46777) 60S ribosomal protein L5|
          Length = 296

 Score =  104 bits (259), Expect = 2e-22
 Identities = 50/112 (44%), Positives = 73/112 (65%)
 Frame = -2

Query: 538 IPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGIS 359
           IPHS KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  ++
Sbjct: 172 IPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVT 231

Query: 358 ADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 203
            D ME +YKK HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 232 PDMMEEMYKKAHAAIRENPVYEKKPKKEVK-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5_RAT (P09895) 60S ribosomal protein L5|
          Length = 296

 Score =  103 bits (258), Expect = 2e-22
 Identities = 50/112 (44%), Positives = 73/112 (65%)
 Frame = -2

Query: 538 IPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGIS 359
           IPHS KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  ++
Sbjct: 172 IPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVT 231

Query: 358 ADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 203
            D ME +YKK HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 232 PDMMEEMYKKAHAAIRENPVYEKKPKREVK-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5_MOUSE (P47962) 60S ribosomal protein L5|
          Length = 296

 Score =  103 bits (258), Expect = 2e-22
 Identities = 50/112 (44%), Positives = 73/112 (65%)
 Frame = -2

Query: 538 IPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGIS 359
           IPHS KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  ++
Sbjct: 172 IPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVT 231

Query: 358 ADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 203
            D ME +YKK HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 232 PDMMEEMYKKAHAAIRENPVYEKKPKREVK-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5_CHICK (P22451) 60S ribosomal protein L5|
          Length = 296

 Score =  103 bits (257), Expect = 3e-22
 Identities = 51/112 (45%), Positives = 72/112 (64%)
 Frame = -2

Query: 538 IPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGIS 359
           IPHS KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  I+
Sbjct: 172 IPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNIT 231

Query: 358 ADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 203
            D ME +YKK HAAIR +P   K  K   K  KR N  K++  ++K  + ++
Sbjct: 232 PDGMEEMYKKAHAAIRDNPVHEKKPKREVK-KKRVNSTKMSLAQKKDRVAQK 282

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>RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosomal 5S|
           RNA-binding protein)
          Length = 296

 Score = 96.7 bits (239), Expect = 4e-20
 Identities = 47/121 (38%), Positives = 70/121 (57%), Gaps = 5/121 (4%)
 Frame = -2

Query: 538 IPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGIS 359
           +PHS+ RF G+  + + +D E+ R YI+GGHV+ YM  LAD++ E++   F  Y+   I 
Sbjct: 172 VPHSENRFPGWDFETEEIDPELLRSYIFGGHVSQYMEELADDDEERFSELFKGYLADDID 231

Query: 358 ADDMEAVYKKVHAAIRADPSMAKSTKPAPKTH-----KRYNPKKLTYEERKASLVERLNA 194
           AD +E +Y   H AIRADP+   + K   K       K+Y   KL+ EER A +  ++ A
Sbjct: 232 ADSLEDIYTSAHEAIRADPAFKPTEKKFTKEQYAAESKKYRQTKLSKEERAARVAAKIAA 291

Query: 193 L 191
           L
Sbjct: 292 L 292

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>RL5_ANOGA (O44248) 60S ribosomal protein L5|
          Length = 327

 Score = 95.5 bits (236), Expect = 8e-20
 Identities = 45/97 (46%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
 Frame = -2

Query: 541 DIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGI 362
           +IPHS KRF G+  + KS +AE+HR +I+G HVA+YMR+L +E+ E ++  FS+YI  GI
Sbjct: 172 NIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKRQFSKYISLGI 231

Query: 361 SADDMEAVYKKVHAAIR-ADPSMAKSTKPAPKTHKRY 254
            ADD+E +YK  HA+IR   PS     + +P++  R+
Sbjct: 232 KADDIENIYKNAHASIRKIPPSRRNPRRRSPRSGGRW 268

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>RL18_METKA (Q8TZA5) 50S ribosomal protein L18P|
          Length = 202

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 15/52 (28%), Positives = 35/52 (67%)
 Frame = -2

Query: 460 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRAD 305
           I G H+A+  R + +E+PE+Y+  FS+Y+++G+  +++   +++V + I  +
Sbjct: 147 IRGEHIANLARQIKEEDPEEYERRFSKYLERGLKPEELPEHFEEVKSKIEEE 198

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>RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P|
          Length = 205

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = -2

Query: 460 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 314
           I G HVA+Y   L +E PE Y+  FS Y+++G+  + +   +++V   I
Sbjct: 143 IKGKHVAEYAEKLKEENPEAYKARFSRYLQRGLEPEKLPEHFEEVKKKI 191

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>RL18_METMP (Q6LXD4) 50S ribosomal protein L18P|
          Length = 193

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 24/65 (36%), Positives = 37/65 (56%)
 Frame = -2

Query: 541 DIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGI 362
           DIPH DK  A    DE+ L+         G HV +Y  SL  E+ + Y+  FS+Y++KG+
Sbjct: 129 DIPHGDKIIA----DEERLN---------GTHVKNYAESLK-EDADAYKKQFSKYLEKGL 174

Query: 361 SADDM 347
           + +D+
Sbjct: 175 NPEDL 179

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>RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P|
          Length = 203

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 16/49 (32%), Positives = 30/49 (61%)
 Frame = -2

Query: 460 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 314
           I G H+A+Y R L +++ EK++  F  Y++KG+  + +   + +V A I
Sbjct: 144 IRGEHIAEYARMLKEQDEEKFRRQFGGYLEKGLDPEKLPEHFDEVKARI 192

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>RL18_SULTO (Q975J9) 50S ribosomal protein L18P|
          Length = 196

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 17/59 (28%), Positives = 34/59 (57%)
 Frame = -2

Query: 484 DAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRA 308
           D  I    I G H+A Y + L  E PE ++  FS+Y+++G+   D+ + ++++   I++
Sbjct: 135 DLGIKEDRIKGVHIASYAQKLEAENPELFKRLFSKYLERGLHPKDLPSHFEEILNKIKS 193

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>RL18_PYRHO (O59438) 50S ribosomal protein L18P|
          Length = 203

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 14/49 (28%), Positives = 31/49 (63%)
 Frame = -2

Query: 460 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 314
           I G H+A+Y R L +++ ++++  F  Y++KG+  + +   +++V A I
Sbjct: 144 IRGEHIAEYARMLKEQDEDRFRRQFGGYLEKGLDPEKLPEHFEEVKARI 192

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>RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)|
          Length = 203

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 15/49 (30%), Positives = 30/49 (61%)
 Frame = -2

Query: 460 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 314
           I G H+A+Y + L +++ EK++  F  Y+ KG+  + +   +++V A I
Sbjct: 144 IRGEHIAEYAKMLKEQDEEKFRRQFGGYLVKGLDPEKLPEHFEEVKARI 192

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>RL18_METJA (P54044) 50S ribosomal protein L18P|
          Length = 195

 Score = 37.7 bits (86), Expect = 0.021
 Identities = 14/49 (28%), Positives = 30/49 (61%)
 Frame = -2

Query: 460 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 314
           I G H+  Y   L +++ E+Y+  FS+Y++KG+  + +   ++++ A I
Sbjct: 143 IRGEHIKAYAEMLKEQDEERYKKQFSKYLEKGLEPEKLPEHFEEIKAKI 191

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>RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P|
          Length = 201

 Score = 37.7 bits (86), Expect = 0.021
 Identities = 16/49 (32%), Positives = 30/49 (61%)
 Frame = -2

Query: 460 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 314
           I G H+A+Y ++L +E+   Y+  FS Y+ KG+  + +   +++V A I
Sbjct: 144 INGEHIANYAKALKEEDEALYRKQFSGYLVKGLEPEKLPEHFEEVKAKI 192

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>RL18_METVA (P14033) 50S ribosomal protein L18P|
          Length = 195

 Score = 33.9 bits (76), Expect = 0.30
 Identities = 14/47 (29%), Positives = 29/47 (61%)
 Frame = -2

Query: 454 GGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 314
           G H+  Y   L ++E E Y+  FS+Y++KG++ +D+   ++++   I
Sbjct: 147 GTHIKQYAELLKEDE-EAYKKQFSKYLEKGLNPEDLPEHFEELKGKI 192

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>ZN674_HUMAN (Q2M3X9) Zinc finger protein 674|
          Length = 581

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = -2

Query: 397 QTHFSEYIKKGISADDMEAVYKKVHAAIR---ADPSMAKSTKPAPKTHKRYNPKKLTYE 230
           +TH  +   KGI       +Y+++H + +   ++   A   KP+P  H R + K+  YE
Sbjct: 328 KTHIRQAFYKGIKCTTSSLIYQRIHTSEKPQCSEHGKASDEKPSPTKHWRTHTKENIYE 386

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>RL18_METTH (O26130) 50S ribosomal protein L18P|
          Length = 192

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = -2

Query: 460 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 314
           I G H+ +Y  SL +EE  K    FS+Y+++G+S  D+   + ++   I
Sbjct: 143 IRGEHIMEYAESLDEEELRK---RFSKYLERGLSPVDLPEHFDEIKKRI 188

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>RL18_SULAC (O05640) 50S ribosomal protein L18P|
          Length = 197

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 460 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGI 362
           + G H++ Y + L +E  E Y   FS YI++G+
Sbjct: 143 VNGSHISAYAQKLKNENQELYNKLFSSYIQRGL 175

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>SRYD_DROME (P07664) Serendipity locus protein delta|
          Length = 433

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = -2

Query: 529 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 350
           +D  F    KD++  D EI R+++             DEE E+      E+I + +   D
Sbjct: 126 ADALFVELVKDQEESDTEIKREFV-------------DEEEEEDDDDDDEFICEDVDVGD 172

Query: 349 MEAVYKK 329
            EA+Y K
Sbjct: 173 SEALYGK 179

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>UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstream binding|
           factor 1-A) (UBF-1-A) (xUBF-1)
          Length = 677

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = -2

Query: 439 DYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPK 269
           DY + LA+++   Y+T F  ++ KG+S+ D  A YK+ ++  R   S AK   P  K
Sbjct: 531 DYYKKLAEDQQRVYRTQFDTWM-KGLSSQD-RAAYKEQNSNKR--KSTAKIQVPVAK 583

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>CTR3_MOUSE (P70423) Cationic amino acid transporter 3 (CAT-3) (Solute carrier|
           family 7 member 3) (Cationic amino acid transporter y+)
          Length = 618

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +2

Query: 389 VSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLLETSKSLVT 529
           +S  L G ++   PHV++  P    LA+ L +  LLVL  +  +LVT
Sbjct: 144 ISRTLKGTILLKMPHVLAEYPDFFALALVLLLTGLLVLGASKSALVT 190

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>SCNNB_RAT (P37090) Amiloride-sensitive sodium channel beta-subunit|
           (Epithelial Na+ channel beta subunit) (Beta ENaC)
           (Nonvoltage-gated sodium channel 1 beta subunit) (SCNEB)
           (Beta NaCH)
          Length = 638

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 388 SEFGTSRVPHLLATSCSQQHALHRCTCGESQHP 486
           S++ T+        SC Q H +H C+CG   +P
Sbjct: 373 SDYNTTYSIQACLHSCFQDHMIHNCSCGHYLYP 405

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>NCKP1_ARATH (Q5S2C4) Protein NAP1 (Nck-associated protein 1) (AtNAP1)|
           (AtNAP125) (p125Nap1) (NAP of plants) (ARP2/3 regulatory
           protein subunit NAPP) (Protein GNARLED)
          Length = 1425

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = +2

Query: 326 NLLVNCFHVIS*DSLLDVLTEVSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLL 505
           ++L N  H +    L +V +    VLLG+L+C  P  +  + SID+  V L    ++ L 
Sbjct: 302 DILTNSAHPMRAQDLANVTSYREWVLLGYLVC--PDELLRVTSIDIALVVLKENLVVTLF 359

Query: 506 ETSKSL 523
               SL
Sbjct: 360 RDEVSL 365

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>ODO1_RICCN (Q92J42) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)|
           (Alpha-ketoglutarate dehydrogenase)
          Length = 928

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 10/103 (9%)
 Frame = -2

Query: 532 HSDKRFAGFKKDEKSLDAEIHRKYIYGG-------HVADYMRSLADEEPEKYQTHFSEYI 374
           H D  F G     +SL       Y  GG       +   +  + AD    +Y T F++ I
Sbjct: 350 HGDAAFCGQGVVAESLSMSPLAAYDIGGILHFVINNQLGFTANAADTRASRYSTEFAKII 409

Query: 373 KKGI---SADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRY 254
              I   + DD+EAV K  + A+       K        +++Y
Sbjct: 410 AAPILHVNGDDIEAVLKATNIAVEYRQKFGKDVVVEIICYRKY 452

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>RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)|
          Length = 101

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = -2

Query: 379 YIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 203
           Y +K +   D        HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 30  YARKRLVIQDKNKYNTPAHAAIRENPVYEKKPKREVK-KKRWNRPKMSLAQKKDRVAQK 87

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>VTA1_YEAST (Q06263) Vacuolar protein sorting-associated protein VTA1|
           (VPS20-associated protein 1)
          Length = 330

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 25/84 (29%), Positives = 40/84 (47%)
 Frame = -2

Query: 421 ADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKK 242
           AD   E+ QT   +  +  I+ D+ + V K+V     + PS     +PA   HK Y   +
Sbjct: 231 ADSVNEEEQT--VDKNEDAITKDEQQVVKKEVDLTRPSAPS-----EPAAAEHKSYTKDE 283

Query: 241 LTYEERKASLVERLNALNNSAGAA 170
           LT    +AS +E++  L   A +A
Sbjct: 284 LTKIMDRASKIEQIQKLAKYAISA 307

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>CTR3_RAT (O08812) Cationic amino acid transporter 3 (CAT-3) (Solute carrier|
           family 7 member 3) (Cationic amino acid transporter y+)
          Length = 619

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +2

Query: 389 VSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLLETSKSLVT 529
           +S  L G ++   PHV++  P    LA+ L +  LLVL      LVT
Sbjct: 144 ISQTLKGTILLNMPHVLAEYPDFFALALVLLLTGLLVLGANESGLVT 190

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>ZN622_CHICK (Q90Y35) Zinc finger protein 622 (Zn-finger protein C47)|
          Length = 405

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
 Frame = -2

Query: 523 KRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISAD--D 350
           KRF+ F   E  L ++ H          +  +       +K +    + ++KG++ +  D
Sbjct: 74  KRFSTFNAYENHLKSKKH---------LELEKKAVQAVSKKVKILNEKNLEKGLAVESVD 124

Query: 349 MEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNP 248
            + +   +  AIRA PS +    P P +H   +P
Sbjct: 125 KDEMNAAIQQAIRAQPSSSPKKVPLPPSHASSSP 158

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>PTPR2_MOUSE (P80560) Receptor-type tyrosine-protein phosphatase N2 precursor|
           (EC 3.1.3.48) (R-PTP-N2) (PTP IA-2beta) (Protein
           tyrosine phosphatase-NP) (PTP-NP)
          Length = 1001

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 248 QEAHLRGEEGQPRREAQRPQQL 183
           QE+H RG EGQPR +   P+ +
Sbjct: 340 QESHGRGAEGQPREQTDAPETM 361

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>GIDA_BORGA (Q662I6) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 621

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 3/116 (2%)
 Frame = -2

Query: 529 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 350
           SDKR      D   +D E + KY++     + ++ L  +     +    E +KK +S D 
Sbjct: 441 SDKRLIKIGYDLGLVDEERYSKYLFKKRRVEEIKELLKQRRLSLKDVADEQLKKHVSKDF 500

Query: 349 MEAVYK---KVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNAL 191
              +      +   I+ DPS++ S     +     + K   Y  R+  L+++LN L
Sbjct: 501 YHILKDPSISLDNLIKIDPSLSDSKVILEQV--ELDVKYEGYINRQKDLIKKLNNL 554

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>UBF1B_XENLA (P25980) Nucleolar transcription factor 1-B (Upstream binding|
           factor 1-B) (UBF-1-B) (xUBF-2)
          Length = 701

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = -2

Query: 439 DYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKT 266
           DY + LA+++   Y+T F  ++ KG+S  D  A YK+ +   R   S  K   P+ K+
Sbjct: 553 DYYKKLAEDQQRLYRTQFDTWM-KGLSTQD-RAAYKEQNTNKR--KSTTKIQAPSSKS 606

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>NCKP1_ORYSA (Q6ZBH9) Probable protein NAP1 (Nck-associated protein 1)|
           (P125Nap1) (NAP of plants)
          Length = 1359

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +2

Query: 326 NLLVNCFHVIS*DSLLDVLTEVSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVL 502
           ++L N  H +    L +V +    VLLG+L+C  P  +  + SIDV  V L    +L L
Sbjct: 291 DILTNSAHPMRAQDLANVTSYREWVLLGYLVC--PDELLRVTSIDVAMVVLKENLVLSL 347

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>Y132_BUCAP (Q8KA02) Hypothetical protein BUsg132|
          Length = 252

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 128 LPSVVLQRAFLLKSGT-MHNGPVPFCLGYLAGVIDCYXGIMC 6
           LP +V    F+   GT + NG +PF   ++AG+I C  G  C
Sbjct: 36  LPGIV----FMATLGTFIGNGKLPFYPSWIAGIIGCLLGDWC 73

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>Y1664_METJA (Q59058) Hypothetical protein MJ1664|
          Length = 226

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
 Frame = -2

Query: 433 MRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVH---AAIRADPSMAKSTKPAPKTH 263
           M  L  +  ++ +  F EY   G S+D+   +YK  +   + IR   +M +     PK  
Sbjct: 1   MNKLKLKNEKEVRIKFGEYKLTGFSSDNGNNLYKLFNLTLSKIRYRKAMLEHNFQLPKIK 60

Query: 262 KRYNPKKLT--YEERKASLVERLNAL 191
           + + PK++T   +E     +E +N +
Sbjct: 61  ESHKPKEITEKIKENDIYFLELINEI 86

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>TREF1_HUMAN (Q96PN7) Transcriptional-regulating factor 1|
           (Transcriptional-regulating protein 132) (Zinc finger
           transcription factor TReP-132) (Zinc finger protein
           rapa)
          Length = 1200

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -1

Query: 293 QINQASSQ--DSQEVQPQEAHLRGEEGQPRREAQRPQQL 183
           Q  QA  Q    QE+Q Q   +R  + QP  + Q+PQQL
Sbjct: 274 QQQQAGQQRISMQEIQTQPQQIRPSQPQPPPQQQQPQQL 312

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>OAF1_YEAST (P39720) Oleate-activated transcription factor 1|
          Length = 1047

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
 Frame = -2

Query: 454 GGHVADYMRSLADEEP---------EKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADP 302
           GG  +D +R+L +E           E+Y+ HF EY+   +   ++E   + +   I  DP
Sbjct: 319 GGEYSDLLRNLINECEAILPSYEIIERYKNHFYEYVYPSLPFIELEIFEESLSQTIFPDP 378

Query: 301 S 299
           +
Sbjct: 379 N 379


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,662,247
Number of Sequences: 219361
Number of extensions: 1198563
Number of successful extensions: 4250
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 4094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4235
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result