ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4p16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y2910_MYCBO (P65046) Hypothetical protein Mb2910c 31 3.1
2Y2886_MYCTU (P65045) Hypothetical protein Rv2886c/MT2954 31 3.1

>Y2910_MYCBO (P65046) Hypothetical protein Mb2910c|
          Length = 295

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +1

Query: 454 VAERWLRLGRLPAPFRRCCR 513
           +A RWLR+GRLP P RR  R
Sbjct: 116 IAYRWLRVGRLPVPARRVGR 135



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>Y2886_MYCTU (P65045) Hypothetical protein Rv2886c/MT2954|
          Length = 295

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +1

Query: 454 VAERWLRLGRLPAPFRRCCR 513
           +A RWLR+GRLP P RR  R
Sbjct: 116 IAYRWLRVGRLPVPARRVGR 135


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,554,493
Number of Sequences: 219361
Number of extensions: 1712588
Number of successful extensions: 4600
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4599
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6769072002
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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