ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags4p16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY109243.1| Zea mays PCO082821 mRNA sequence Length = 609 Score = 91.7 bits (46), Expect = 3e-15 Identities = 107/126 (84%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 521 ggtttcttgttggcagcggcggctttggcggccgcctctttcacctccctacacaccctc 580 ||||||||||| ||| || || ||||| ||||||||||||||||| || |||||| | Sbjct: 239 ggtttcttgttattagcagcagccttggcagccgcctctttcacctctctgcacaccttg 298 Query: 581 tccagtatcaccaggaagtcgcgcacgaccacgaacaggcgcaggccctcatcctttccc 640 ||||| ||| ||||||||||||| || || |||||||| ||||||||||||| ||||||| Sbjct: 299 tccaggatccccaggaagtcgcggacaacgacgaacagccgcaggccctcat-ctttccc 357 Query: 641 ggtgct 646 ||||| Sbjct: 358 cgtgct 363
>ref|XM_470938.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2721 Score = 65.9 bits (33), Expect = 2e-07 Identities = 101/121 (83%), Gaps = 2/121 (1%) Strand = Plus / Minus Query: 560 ttcacctccctacacaccctctccagtatcaccaggaagtcgcgcacgaccacgaacagg 619 ||||||||||| |||||| | || || || | ||||||||||||||||| ||||| ||| Sbjct: 2543 ttcacctccctgcacaccttgtcgagaatgccgaggaagtcgcgcacgacgacgaagagg 2484 Query: 620 cgcaggccctcatcctttcccggtgcttgccgtggaagtaatccacgatggagcgcacca 679 || ||||| || ||| || ||||||| ||||||||||||| || ||| ||| |||||||| Sbjct: 2483 cgtaggccttcgtcc-ttgccggtgc-tgccgtggaagtagtcgacggtggcgcgcacca 2426 Query: 680 g 680 | Sbjct: 2425 g 2425 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 376 atcggaatcagaggagctggagctgct 402 ||||||||||||||||||||||||||| Sbjct: 2715 atcggaatcagaggagctggagctgct 2689
>emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1160F02, complete sequence Length = 139971 Score = 65.9 bits (33), Expect = 2e-07 Identities = 101/121 (83%), Gaps = 2/121 (1%) Strand = Plus / Minus Query: 560 ttcacctccctacacaccctctccagtatcaccaggaagtcgcgcacgaccacgaacagg 619 ||||||||||| |||||| | || || || | ||||||||||||||||| ||||| ||| Sbjct: 51898 ttcacctccctgcacaccttgtcgagaatgccgaggaagtcgcgcacgacgacgaagagg 51839 Query: 620 cgcaggccctcatcctttcccggtgcttgccgtggaagtaatccacgatggagcgcacca 679 || ||||| || ||| || ||||||| ||||||||||||| || ||| ||| |||||||| Sbjct: 51838 cgtaggccttcgtcc-ttgccggtgc-tgccgtggaagtagtcgacggtggcgcgcacca 51781 Query: 680 g 680 | Sbjct: 51780 g 51780 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 376 atcggaatcagaggagctggagctgct 402 ||||||||||||||||||||||||||| Sbjct: 52070 atcggaatcagaggagctggagctgct 52044
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 65.9 bits (33), Expect = 2e-07 Identities = 101/121 (83%), Gaps = 2/121 (1%) Strand = Plus / Minus Query: 560 ttcacctccctacacaccctctccagtatcaccaggaagtcgcgcacgaccacgaacagg 619 ||||||||||| |||||| | || || || | ||||||||||||||||| ||||| ||| Sbjct: 51898 ttcacctccctgcacaccttgtcgagaatgccgaggaagtcgcgcacgacgacgaagagg 51839 Query: 620 cgcaggccctcatcctttcccggtgcttgccgtggaagtaatccacgatggagcgcacca 679 || ||||| || ||| || ||||||| ||||||||||||| || ||| ||| |||||||| Sbjct: 51838 cgtaggccttcgtcc-ttgccggtgc-tgccgtggaagtagtcgacggtggcgcgcacca 51781 Query: 680 g 680 | Sbjct: 51780 g 51780 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 376 atcggaatcagaggagctggagctgct 402 ||||||||||||||||||||||||||| Sbjct: 52070 atcggaatcagaggagctggagctgct 52044 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Plus Query: 561 tcacctccctacacaccctctccagtatcaccaggaagtc 600 |||||||| | |||||||||||||| ||| |||||||||| Sbjct: 23053204 tcacctccttgcacaccctctccagcatccccaggaagtc 23053243 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 18360315 atacatacatatatatacatacata 18360291 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 18360123 atacatacatatatatacatacata 18360099 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 2079378 atacatacatatatatacatacata 2079402 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 ttcttgttggcagcggcggc 543 |||||||||||||||||||| Sbjct: 25211669 ttcttgttggcagcggcggc 25211688 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 tacatacatttatatacatacata 253 ||||||||| |||||||||||||| Sbjct: 309943 tacatacatatatatacatacata 309920
>emb|AL845551.2| Zebrafish DNA sequence from clone XX-119C3 Contains 3 novel genes for alpha-type globins and one novel gene for a beta-type globin, complete sequence Length = 40374 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 ||||||||||||||||||||||||| Sbjct: 27763 atacatacatttatatacatacata 27739 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 27781 atacatacatatatatacatacata 27757
>ref|XM_472757.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2502 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Minus Query: 561 tcacctccctacacaccctctccagtatcaccaggaagtc 600 |||||||| | |||||||||||||| ||| |||||||||| Sbjct: 2446 tcacctccttgcacaccctctccagcatccccaggaagtc 2407
>emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1358B12, complete sequence Length = 131246 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Plus Query: 561 tcacctccctacacaccctctccagtatcaccaggaagtc 600 |||||||| | |||||||||||||| ||| |||||||||| Sbjct: 49534 tcacctccttgcacaccctctccagcatccccaggaagtc 49573
>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16, complete sequence Length = 176383 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Plus Query: 561 tcacctccctacacaccctctccagtatcaccaggaagtc 600 |||||||| | |||||||||||||| ||| |||||||||| Sbjct: 147621 tcacctccttgcacaccctctccagcatccccaggaagtc 147660
>dbj|AK106770.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-F08, full insert sequence Length = 2771 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Minus Query: 561 tcacctccctacacaccctctccagtatcaccaggaagtc 600 |||||||| | |||||||||||||| ||| |||||||||| Sbjct: 2558 tcacctccttgcacaccctctccagcatccccaggaagtc 2519
>emb|CR759875.6| Zebrafish DNA sequence from clone DKEY-274K22 in linkage group 1, complete sequence Length = 216255 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 229 atacatacatttatatacataca 251 ||||||||||||||||||||||| Sbjct: 211254 atacatacatttatatacataca 211276
>emb|AL158817.11| Human DNA sequence from clone RP3-429O6 on chromosome 6 Contains part of a novel gene and a CpG island, complete sequence Length = 120529 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 229 atacatacatttatatacataca 251 ||||||||||||||||||||||| Sbjct: 20668 atacatacatttatatacataca 20690
>emb|AL845292.4| Mouse DNA sequence from clone RP23-386I21 on chromosome 2, complete sequence Length = 186607 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 acatacatttatatacatacata 253 ||||||||||||||||||||||| Sbjct: 117879 acatacatttatatacatacata 117857
>gb|AC153385.3| Mus musculus 6 BAC RP23-64D14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226269 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 223 agaatgatacatacatttatatacatacat 252 ||||||||||| ||||||||||||| |||| Sbjct: 85813 agaatgatacaaacatttatatacagacat 85842
>gb|AC118260.7| Mus musculus chromosome 5, clone RP24-374B14, complete sequence Length = 158892 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 atacatttatatacatacataa 254 |||||||||||||||||||||| Sbjct: 21785 atacatttatatacatacataa 21764
>gb|AC101854.8| Mus musculus chromosome 1, clone RP23-298H18, complete sequence Length = 190474 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 gatacatacatttatatacatacata 253 ||||||||||| |||||||||||||| Sbjct: 25464 gatacatacatatatatacatacata 25439
>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence Length = 209986 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacataa 254 |||||||||| ||||||||||||||| Sbjct: 195161 atacatacatatatatacatacataa 195186
>gb|AC137154.2| Mus musculus BAC clone RP24-572L22 from chromosome 5, complete sequence Length = 173460 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacataa 254 |||||||||| ||||||||||||||| Sbjct: 16826 atacatacatatatatacatacataa 16851
>emb|CR925863.7| Zebrafish DNA sequence from clone DKEY-184N1 in linkage group 8, complete sequence Length = 134388 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacataa 254 |||||||||| ||||||||||||||| Sbjct: 89460 atacatacatatatatacatacataa 89485
>gb|AC132095.3| Mus musculus BAC clone RP24-381M10 from chromosome 17, complete sequence Length = 187926 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 225 aatgatacatacatttatatacatacataa 254 ||||||| |||||| ||||||||||||||| Sbjct: 167791 aatgatatatacatatatatacatacataa 167762
>gb|AC133161.4| Mus musculus BAC clone RP24-534C7 from chromosome 1, complete sequence Length = 157891 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 gatacatacatttatatacatacata 253 ||||||||||| |||||||||||||| Sbjct: 125825 gatacatacatatatatacatacata 125800
>gb|AC125135.5| Mus musculus BAC clone RP24-321M1 from chromosome 17, complete sequence Length = 182503 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 225 aatgatacatacatttatatacatacataa 254 ||||||| |||||| ||||||||||||||| Sbjct: 144104 aatgatatatacatatatatacatacataa 144133
>gb|AC128680.6| Homo sapiens 3 BAC RP13-551P9 (Roswell Park Cancer institute Human BAC Library) complete sequence Length = 146175 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 catacatttatatacatacata 253 |||||||||||||||||||||| Sbjct: 83395 catacatttatatacatacata 83416
>emb|AL133546.4| Human DNA sequence from clone RP1-29A6 on chromosome Xq26.2-27.3, complete sequence Length = 113988 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 231 acatacatttatatacatacat 252 |||||||||||||||||||||| Sbjct: 106881 acatacatttatatacatacat 106860
>emb|CR388147.13| Zebrafish DNA sequence from clone DKEYP-72E1 in linkage group 3, complete sequence Length = 194517 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 230 tacatacatttatatacataca 251 |||||||||||||||||||||| Sbjct: 33910 tacatacatttatatacataca 33889
>gb|AC112916.3| Homo sapiens X BAC RP11-765I9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172457 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 tatatacatacataacatagta 261 |||||||||||||||||||||| Sbjct: 46241 tatatacatacataacatagta 46262
>gb|AC097348.5| Homo sapiens X BAC RP11-489K4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 85293 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 tatatacatacataacatagta 261 |||||||||||||||||||||| Sbjct: 46260 tatatacatacataacatagta 46281
>emb|AL954819.21| Zebrafish DNA sequence from clone CH211-1F7 in linkage group 8, complete sequence Length = 177929 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacataa 254 |||||||||| ||||||||||||||| Sbjct: 25841 atacatacatatatatacatacataa 25866
>emb|BX547940.7| Zebrafish DNA sequence from clone DKEYP-108F8 in linkage group 5, complete sequence Length = 50209 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacataa 254 |||||||||| ||||||||||||||| Sbjct: 25535 atacatacatatatatacatacataa 25560
>dbj|AK045604.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230214O09 product:unclassifiable, full insert sequence Length = 1662 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 230 tacatacatttatatacataca 251 |||||||||||||||||||||| Sbjct: 376 tacatacatttatatacataca 397
>gb|AC021237.5|AC021237 Homo sapiens chromosome 8, clone RP11-122A21, complete sequence Length = 175973 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 233 atacatttatatacatacataa 254 |||||||||||||||||||||| Sbjct: 37430 atacatttatatacatacataa 37451
>gb|AC155845.3| Mus musculus 6 BAC RP24-399D24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 145877 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 230 tacatacatttatatacataca 251 |||||||||||||||||||||| Sbjct: 16139 tacatacatttatatacataca 16118
>gb|AC158667.8| Mus musculus 6 BAC RP23-83P5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 234055 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 230 tacatacatttatatacataca 251 |||||||||||||||||||||| Sbjct: 170122 tacatacatttatatacataca 170101
>gb|AF286886.3| Homo sapiens chromosome 8 clone CTA-396G5 map 8q21-q23, complete sequence Length = 128810 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 atacatttatatacatacataa 254 |||||||||||||||||||||| Sbjct: 114368 atacatttatatacatacataa 114347
>gb|AC147872.3| Monodelphis domestica clone VMRC6-555H19, complete sequence Length = 139145 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacataa 254 |||||||||| ||||||||||||||| Sbjct: 44291 atacatacatgtatatacatacataa 44316
>emb|CT573438.2| Pan troglodytes chromosome X clone RP43-057M01 map Xq28, complete sequence Length = 162109 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 231 acatacatttatatacatacat 252 |||||||||||||||||||||| Sbjct: 15889 acatacatttatatacatacat 15910
>gb|U43281.1|SCU43281 Saccharomyces cerevisiae chromosome XVI cosmid 8059/8047 Length = 38669 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 237 atttatatacatacataacata 258 |||||||||||||||||||||| Sbjct: 36082 atttatatacatacataacata 36061
>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold Length = 1833844 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacataa 254 |||||||||| ||||||||||||||| Sbjct: 1680618 atacatacatgtatatacatacataa 1680643 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 550578 atacatacatatatatacatacata 550602
>gb|AC163992.9| Mus musculus chromosome 1, clone RP23-193H10, complete sequence Length = 198062 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 122111 atacatacatatatatacatacata 122087
>gb|AC160761.6| Mus musculus BAC clone RP24-163J22 from chromosome 7, complete sequence Length = 199480 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 24434 atacatacatatatatacatacata 24458
>gb|AC166101.4| Mus musculus BAC clone RP23-385P23 from chromosome 6, complete sequence Length = 223116 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 gatacatacatttatatacatacat 252 ||||||||||||||||| ||||||| Sbjct: 72835 gatacatacatttatatgcatacat 72859
>gb|AC114554.8| Mus musculus chromosome 5, clone RP23-414E14, complete sequence Length = 204467 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 atacatacatttatatacata 249 ||||||||||||||||||||| Sbjct: 40059 atacatacatttatatacata 40039
>gb|AC113300.7| Mus musculus chromosome 5, clone RP23-430C4, complete sequence Length = 176085 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 143352 atacatacatatatatacatacata 143328
>gb|AC151980.3| Mus musculus BAC clone RP24-83M3 from chromosome 8, complete sequence Length = 253457 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 219691 atacatacatatatatacatacata 219715 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 219575 atacatacatatatatacatacata 219599 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 219427 atacatacatatatatacatacata 219451
>ref|XM_514149.1| PREDICTED: Pan troglodytes similar to Rpl7a protein (LOC457681), mRNA Length = 1816 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 ttggcagcggcggctttggcg 550 ||||||||||||||||||||| Sbjct: 679 ttggcagcggcggctttggcg 659
>gb|AC166985.4| Mus musculus chromosome 1, clone RP23-14I20, complete sequence Length = 191452 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 62604 atacatacatatatatacatacata 62628
>gb|AC166986.4| Mus musculus chromosome 1, clone RP24-184H22, complete sequence Length = 164014 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 86428 atacatacatatatatacatacata 86452
>gb|AC137748.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0076A09, complete sequence Length = 157010 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 43588 atacatacatatatatacatacata 43564 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 43560 atacatacatatatatacatacata 43536
>gb|U72728.1|AH007024S1 Oryza longistaminata receptor-like kinase protein (Xa21), family member F, pseudogene sequence Length = 7204 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 7121 atacatacatatatatacatacata 7145
>gb|AC169703.1| Rhesus Macaque BAC CH250-14E24 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 161972 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 aaaaagacacctgcatgtata 76 ||||||||||||||||||||| Sbjct: 17096 aaaaagacacctgcatgtata 17076
>gb|AC104743.28| Mus musculus chromosome 6, clone RP23-27D8, complete sequence Length = 218391 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 188123 atacatacatatatatacatacata 188099
>gb|AY024216.1| Oryza sativa microsatellite MRG6541 containing (TATG)X15, closest to marker L655, genomic sequence Length = 260 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 91 atacatacatatatatacatacata 67
>gb|AY024204.1| Oryza sativa microsatellite MRG6529 containing (TATG)X7, genomic sequence Length = 228 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 171 atacatacatatatatacatacata 147 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 145 atacatacatatatatacatacata 121 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 111 atacatacatatatatacatacata 87
>gb|AY024197.1| Oryza sativa microsatellite MRG6522 containing (TATG)X6, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 201 atacatacatatatatacatacata 177 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 175 atacatacatatatatacatacata 151 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 141 atacatacatatatatacatacata 117
>gb|AY024191.1| Oryza sativa microsatellite MRG6516 containing (TATG)X6, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 111 atacatacatatatatacatacata 87
>gb|AY024009.1| Oryza sativa microsatellite MRG6334 containing (CATA)X15, closest to marker L655, genomic sequence Length = 260 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 170 atacatacatatatatacatacata 194
>gb|AY023837.1| Oryza sativa microsatellite MRG6162 containing (ATAC)X17, closest to marker L655, genomic sequence Length = 268 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 11 atacatacatatatatacatacata 35
>gb|AY021757.1| Oryza sativa microsatellite MRG4082 containing (TA)X35, closest to marker R1862, genomic sequence Length = 270 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 229 atacatacatatatatacatacata 205
>gb|AY021420.1| Oryza sativa microsatellite MRG3745 containing (TA)X25, genomic sequence Length = 250 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 218 atacatacatatatatacatacata 242
>gb|AY021415.1| Oryza sativa microsatellite MRG3740 containing (TA)X25, genomic sequence Length = 250 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 177 atacatacatatatatacatacata 153
>gb|AY021375.1| Oryza sativa microsatellite MRG3700 containing (TA)X25, genomic sequence Length = 250 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 33 atacatacatatatatacatacata 9
>gb|AY021234.1| Oryza sativa microsatellite MRG3559 containing (TA)X22, closest to marker R1862, genomic sequence Length = 244 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 77 atacatacatatatatacatacata 53
>gb|AY021217.1| Oryza sativa microsatellite MRG3542 containing (TA)X21, genomic sequence Length = 242 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 69 atacatacatatatatacatacata 45
>gb|AY020852.1| Oryza sativa microsatellite MRG3177 containing (TA)X15, closest to marker G376, genomic sequence Length = 230 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 175 atacatacatatatatacatacata 199
>gb|AY020774.1| Oryza sativa microsatellite MRG3099 containing (TA)X13, closest to marker Y6854L, genomic sequence Length = 226 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 165 atacatacatatatatacatacata 141
>gb|AY020770.1| Oryza sativa microsatellite MRG3095 containing (TA)X13, closest to marker R1582, genomic sequence Length = 226 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 164 atacatacatatatatacatacata 188
>gb|AY020735.1| Oryza sativa microsatellite MRG3060 containing (TA)X13, closest to marker C559, genomic sequence Length = 226 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 35 atacatacatatatatacatacata 11
>gb|AY020724.1| Oryza sativa microsatellite MRG3049 containing (TA)X13, closest to marker R1862, genomic sequence Length = 226 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 77 atacatacatatatatacatacata 53
>gb|AY020704.1| Oryza sativa microsatellite MRG3029 containing (TA)X13, closest to marker L655, genomic sequence Length = 226 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 167 atacatacatatatatacatacata 143
>gb|AY019060.1| Oryza sativa microsatellite MRG1385 containing (AT)X26, genomic sequence Length = 252 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 186 atacatacatatatatacatacata 162
>gb|AY019044.1| Oryza sativa microsatellite MRG1369 containing (AT)X25, genomic sequence Length = 250 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 75 atacatacatatatatacatacata 99
>gb|AY018642.1| Oryza sativa microsatellite MRG0967 containing (AT)X19, closest to marker Y2757R, genomic sequence Length = 238 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 188 atacatacatgtatatacatacata 164
>gb|AY018536.1| Oryza sativa microsatellite MRG0861 containing (AT)X17, closest to marker R1582, genomic sequence Length = 234 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 187 atacatacatatatatacatacata 211
>gb|AY018136.1| Oryza sativa microsatellite MRG0461 containing (AT)X12, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 55 atacatacatatatatacatacata 79
>gb|AY017719.1| Oryza sativa microsatellite MRG0044 containing (AC)X15, genomic sequence Length = 230 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 167 atacatacatatatatacatacata 191
>gb|AC119431.13| Mus musculus chromosome 1, clone RP24-100O3, complete sequence Length = 205163 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 ||||| ||||||||||||||||||| Sbjct: 73384 atacacacatttatatacatacata 73408
>gb|AC161450.3| Mus musculus BAC clone RP24-75I4 from chromosome 15, complete sequence Length = 198734 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 81547 atacatacatatatatacatacata 81571
>gb|AC132837.11| Mus musculus chromosome 18, clone RP24-490M12, complete sequence Length = 139563 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 33157 atacatacatatatatacatacata 33133 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 29948 atacatacatatatatacatacata 29924
>gb|AC130481.11| Mus musculus chromosome 1, clone RP24-125E22, complete sequence Length = 159436 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 atacatttatatacatacata 253 ||||||||||||||||||||| Sbjct: 106961 atacatttatatacatacata 106981
>gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0039A21, complete sequence Length = 139074 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 30628 atacatacatatatatacatacata 30604
>gb|AC153974.9| Mus musculus 10 BAC RP24-462I5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162977 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 atacatttatatacatacata 253 ||||||||||||||||||||| Sbjct: 30390 atacatttatatacatacata 30370
>gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007A06, complete sequence Length = 148029 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 98700 atacatacatatatatacatacata 98676
>gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0082P17, complete sequence Length = 157539 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 10485 atacatacatatatatacatacata 10461
>gb|AC139060.5| Mus musculus chromosome 16, clone RP23-58G17, complete sequence Length = 196065 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 103680 atacatacatatatatacatacata 103704
>ref|NM_031437.1| Homo sapiens Ras association (RalGDS/AF-6) domain family 5 (RASSF5), transcript variant 4, mRNA Length = 3498 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 ttggcagcggcggctttggcg 550 ||||||||||||||||||||| Sbjct: 36 ttggcagcggcggctttggcg 16
>ref|NM_182663.1| Homo sapiens Ras association (RalGDS/AF-6) domain family 5 (RASSF5), transcript variant 1, mRNA Length = 2048 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 ttggcagcggcggctttggcg 550 ||||||||||||||||||||| Sbjct: 36 ttggcagcggcggctttggcg 16
>ref|NM_182664.1| Homo sapiens Ras association (RalGDS/AF-6) domain family 5 (RASSF5), transcript variant 2, mRNA Length = 1932 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 ttggcagcggcggctttggcg 550 ||||||||||||||||||||| Sbjct: 36 ttggcagcggcggctttggcg 16
>gb|BC007203.1| Homo sapiens Ras association (RalGDS/AF-6) domain family 5, transcript variant 4, mRNA (cDNA clone MGC:12957 IMAGE:2967057), complete cds Length = 3498 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 ttggcagcggcggctttggcg 550 ||||||||||||||||||||| Sbjct: 36 ttggcagcggcggctttggcg 16
>gb|AC113320.7| Mus musculus chromosome 6, clone RP23-445E16, complete sequence Length = 267708 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 2333 atacatacatatatatacatacata 2357
>gb|AC145516.4| Mus musculus BAC clone RP24-157K17 from chromosome Y, complete sequence Length = 202847 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 118586 atacatacatatatatacatacata 118610
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 23202 atacatacatatatatacatacata 23178 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 23176 atacatacatatatatacatacata 23152 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 23142 atacatacatatatatacatacata 23118
>gb|AC146059.4| Pan troglodytes BAC clone RP43-14K1 from 7, complete sequence Length = 210466 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 taacaacaaatgtgatgtgaa 218 ||||||||||||||||||||| Sbjct: 169038 taacaacaaatgtgatgtgaa 169018
>gb|AC125406.4| Mus musculus BAC clone RP23-32C18 from chromosome 19, complete sequence Length = 208557 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 44153 atacatacatatatatacatacata 44177
>gb|AC145466.3| Mus musculus BAC clone RP24-97F9 from chromosome Y, complete sequence Length = 188392 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 181404 atacatacatatatatacatacata 181380
>gb|AC122363.4| Mus musculus BAC clone RP23-437C1 from chromosome 19, complete sequence Length = 180129 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||||||||||||| |||| Sbjct: 135665 atacatacatttatatacatgcata 135689
>gb|AC145607.3| Mus musculus BAC clone RP24-270N6 from chromosome Y, complete sequence Length = 195706 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 62289 atacatacatatatatacatacata 62265
>gb|AC140783.4| Mus musculus BAC clone RP24-253K16 from chromosome 15, complete sequence Length = 165903 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 73818 atacatacatatatatacatacata 73842
>gb|AC142102.3| Mus musculus BAC clone RP24-322L2 from chromosome Y, complete sequence Length = 43938 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 14682 atacatacatatatatacatacata 14706
>gb|AC161572.4| Mus musculus chromosome 15, clone RP23-358J10, complete sequence Length = 218429 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 atacatttatatacatacata 253 ||||||||||||||||||||| Sbjct: 183431 atacatttatatacatacata 183411
>gb|AC156620.10| Mus musculus chromosome 5, clone RP23-80G18, complete sequence Length = 248320 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 60508 atacatacatatatatacatacata 60484
>gb|AC098572.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1234_D05, complete sequence Length = 107476 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 54650 atacatacatatatatacatacata 54674
>gb|AC099711.5| Mus musculus chromosome 15, clone RP23-397C11, complete sequence Length = 207144 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 7365 atacatacatatatatacatacata 7341
>gb|AC114573.11| Mus musculus chromosome 13, clone RP23-146M15, complete sequence Length = 200859 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 120633 atacatacatatatatacatacata 120657 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 120615 atacatacatatatatacatacata 120639 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 120597 atacatacatatatatacatacata 120621
>gb|AC126421.12| Mus musculus chromosome 1, clone RP23-167H24, complete sequence Length = 218458 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 ||||||||||||||||||| ||||| Sbjct: 9055 atacatacatttatatacaaacata 9079
>gb|AC119864.9| Mus musculus chromosome 18, clone RP23-325I21, complete sequence Length = 194834 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 atacatttatatacatacata 253 ||||||||||||||||||||| Sbjct: 183117 atacatttatatacatacata 183097
>gb|AC154992.11| Mus musculus chromosome 1, clone RP23-420P19, complete sequence Length = 217255 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 58411 atacatacatatatatacatacata 58387
>gb|AC165168.3| Mus musculus BAC clone RP23-12D3 from chromosome 19, complete sequence Length = 215151 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 172768 atacatacatatatatacatacata 172792
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 tggcagcggcggctttggcgg 551 ||||||||||||||||||||| Sbjct: 2534412 tggcagcggcggctttggcgg 2534432
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 15622856 atacatacatatatatacatacata 15622832 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 3591366 atacatacatatatatacatacata 3591390
>gb|AC137905.8| Mus musculus chromosome 15, clone RP23-334B11, complete sequence Length = 210548 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 36275 atacatacatatatatacatacata 36299
>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078f20, complete sequence Length = 151042 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 124063 atacatacatatatatacatacata 124039 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 124037 atacatacatatatatacatacata 124013 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 124003 atacatacatatatatacatacata 123979
>gb|AC090330.22| Homo sapiens chromosome 18, clone RP11-813B21, complete sequence Length = 160530 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 119102 atacatacatgtatatacatacata 119078 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 119088 atacatacatatatatacatacata 119064 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 119070 atacatacatgtatatacatacata 119046 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacat 252 |||||||||| ||||||||||||| Sbjct: 119116 atacatacatgtatatacatacat 119093 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacat 252 |||||||||| ||||||||||||| Sbjct: 119056 atacatacatatatatacatacat 119033
>gb|AC127596.3| Mus musculus BAC clone RP23-56B4 from chromosome 10, complete sequence Length = 114020 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 24292 atacatacatatatatacatacata 24268
>gb|AC105297.35| Mus musculus strain C57BL/6J clone rp23-14k19 map 17, complete sequence Length = 236275 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 catttatatacatacataaca 256 ||||||||||||||||||||| Sbjct: 142770 catttatatacatacataaca 142790
>gb|AC134923.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0030I07, complete sequence Length = 122733 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 62466 atacatacatatatatacatacata 62442
>gb|AC147336.2| Pan troglodytes BAC clone CH251-70I12 from Y, complete sequence Length = 194849 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 178309 atacatacatatatatacatacata 178285
>gb|AC147339.2| Pan troglodytes BAC clone CH251-65E18 from Y, complete sequence Length = 178935 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 118248 atacatacatatatatacatacata 118272
>gb|AC113265.25| Mus musculus strain C57BL/6J clone rp23-46k8 map 17, complete sequence Length = 143758 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 86741 atacatacatatatatacatacata 86765
>gb|AC144627.2| Mus musculus BAC clone RP24-164A21 from chromosome Y, complete sequence Length = 135780 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 128258 atacatacatatatatacatacata 128282
>gb|AC126270.4| Mus musculus BAC clone RP23-233A12 from chromosome 10, complete sequence Length = 208709 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 25152 atacatacatatatatacatacata 25176
>gb|AC134335.2| Mus musculus BAC clone RP24-150I18 from chromosome 15, complete sequence Length = 166926 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 24702 atacatacatatatatacatacata 24678
>emb|CR936462.9| Zebrafish DNA sequence from clone DKEY-259H22 in linkage group 5, complete sequence Length = 40246 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 ||||||||||||| ||||||||||| Sbjct: 2959 atacatacatttacatacatacata 2983
>emb|CR932978.13| Zebrafish DNA sequence from clone DKEY-184D2 in linkage group 9, complete sequence Length = 187266 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 atacatttatatacatacata 253 ||||||||||||||||||||| Sbjct: 120803 atacatttatatacatacata 120783
>emb|BX957328.6| Zebrafish DNA sequence from clone CH211-187F22, complete sequence Length = 106510 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 26822 atacatacatatatatacatacata 26798
>emb|CR626889.13| Zebrafish DNA sequence from clone DKEY-4P15 in linkage group 15, complete sequence Length = 205513 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 173803 atacatacatatatatacatacata 173779 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 173789 atacatacatatatatacatacata 173765
>emb|BX248114.23| Zebrafish DNA sequence from clone CH211-209I22 in linkage group 9, complete sequence Length = 84427 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 12557 atacatacatatatatacatacata 12533
>gb|AC139296.4| Mus musculus BAC clone RP24-131C5 from chromosome 18, complete sequence Length = 165703 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 72154 atacatacatatatatacatacata 72178
>gb|AC135081.3| Mus musculus BAC clone RP24-131A24 from chromosome 7, complete sequence Length = 163138 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 133663 atacatacatatatatacatacata 133687
>gb|AC132319.3| Mus musculus BAC clone RP24-258I12 from chromosome 19, complete sequence Length = 193053 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 106786 atacatacatatatatacatacata 106762
>gb|AC132291.3| Mus musculus BAC clone RP24-319I23 from chromosome 15, complete sequence Length = 164224 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 11467 atacatacatatatatacatacata 11491
>gb|AC126271.4| Mus musculus BAC clone RP23-237H9 from chromosome 5, complete sequence Length = 194736 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 49584 atacatacatatatatacatacata 49608
>gb|AC131722.4| Mus musculus BAC clone RP23-143M5 from chromosome 9, complete sequence Length = 228144 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 atacatttatatacatacata 253 ||||||||||||||||||||| Sbjct: 164295 atacatttatatacatacata 164315
>gb|AC140332.3| Mus musculus BAC clone RP23-408K9 from chromosome 19, complete sequence Length = 206515 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 48937 atacatacatatatatacatacata 48913
>gb|AC013285.10| Homo sapiens chromosome 10 clone RP11-143D9, complete sequence Length = 202500 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 47425 atacatacatatatatacatacata 47401
>gb|AC124382.4| Mus musculus BAC clone RP24-409N22 from chromosome 1, complete sequence Length = 168354 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 102307 atacatacatatatatacatacata 102283
>gb|AC126429.4| Mus musculus BAC clone RP24-403O23 from chromosome 6, complete sequence Length = 152532 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 gatacatacatttatatacatacat 252 ||||||||||||||||| ||||||| Sbjct: 2498 gatacatacatttatatgcatacat 2474
>gb|AC122370.4| Mus musculus BAC clone RP23-459B8 from chromosome 8, complete sequence Length = 176045 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 ||||||||| ||||||||||||||| Sbjct: 94015 atacatacaattatatacatacata 94039
>gb|AC023480.7| Homo sapiens chromosome 3 clone RP11-399K19 map 3p, complete sequence Length = 199814 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 150376 atacatacatatatatacatacata 150400
>gb|AC018822.8| Homo sapiens chromosome 3 clone RP11-324K15 map 3p, complete sequence Length = 189995 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 168879 atacatacatatatatacatacata 168855
>gb|AC125085.4| Mus musculus BAC clone RP24-135G18 from chromosome 8, complete sequence Length = 168721 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 148131 atacatacatctatatacatacata 148107
>emb|CR450787.6| Zebrafish DNA sequence from clone CH211-222O17 in linkage group 12, complete sequence Length = 212974 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 48445 atacatacatatatatacatacata 48421
>emb|AL929044.17| Zebrafish DNA sequence from clone CH211-245D9 in linkage group 1, complete sequence Length = 151090 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 112860 atacatacatatatatacatacata 112884
>emb|CR361563.10| Zebrafish DNA sequence from clone CH211-254L20 in linkage group 25, complete sequence Length = 150089 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 688 atacatacatatatatacatacata 712
>gb|AC114005.5| Mus musculus BAC clone RP23-179L18 from 8, complete sequence Length = 214732 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 174798 atacatacatctatatacatacata 174822
>emb|BX957306.12| Zebrafish DNA sequence from clone DKEY-119H24 in linkage group 1, complete sequence Length = 224487 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 33351 atacatacatatatatacatacata 33375
>emb|CR769783.10| Zebrafish DNA sequence from clone DKEY-40A23 in linkage group 1, complete sequence Length = 222035 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 202194 atacatacatatatatacatacata 202170
>gb|AC121891.2| Mus musculus BAC clone RP24-155I9 from 8, complete sequence Length = 165890 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 104164 atacatacatatatatacatacata 104188
>gb|AC121586.3| Mus musculus BAC clone RP23-273A13 from 2, complete sequence Length = 154614 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 127737 atacatacatatatatacatacata 127713
>gb|AC102627.8| Mus musculus chromosome 14, clone RP23-466M3, complete sequence Length = 193228 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 146886 atacatacatatatatacatacata 146910
>gb|AC138228.10| Mus musculus chromosome 17, clone RP23-304G12, complete sequence Length = 225739 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 56743 atacatacatatatatacatacata 56719
>gb|AC113068.9| Mus musculus chromosome 1, clone RP23-269F19, complete sequence Length = 188836 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 ||||||||||||||||||| ||||| Sbjct: 146973 atacatacatttatatacaaacata 146997
>gb|AC117581.8| Mus musculus chromosome 3, clone RP23-105M18, complete sequence Length = 215747 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 atacatttatatacatacata 253 ||||||||||||||||||||| Sbjct: 145240 atacatttatatacatacata 145220
>gb|AC002089.2| Homo sapiens BAC clone CTA-308B22 from 7, complete sequence Length = 148416 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 aaaaagacacctgcatgtata 76 ||||||||||||||||||||| Sbjct: 105428 aaaaagacacctgcatgtata 105448
>gb|AC072054.10| Homo sapiens BAC clone RP11-33P21 from 7, complete sequence Length = 154037 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 83671 atacatacatatatatacatacata 83695
>gb|AC002461.2| Homo sapiens BAC clone CTA-204I16 from 7, complete sequence Length = 197273 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 taacaacaaatgtgatgtgaa 218 ||||||||||||||||||||| Sbjct: 138196 taacaacaaatgtgatgtgaa 138216
>gb|AC116766.9| Mus musculus chromosome 18, clone RP23-395B17, complete sequence Length = 207631 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 atacatttatatacatacata 253 ||||||||||||||||||||| Sbjct: 83961 atacatttatatacatacata 83941
>gb|AC108392.17| Mus musculus chromosome 10, clone RP23-121B23, complete sequence Length = 207763 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 53972 atacatacatatatatacatacata 53948
>gb|AC137119.7| Mus musculus chromosome 6, clone RP23-252K4, complete sequence Length = 226354 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 105403 atacatacatatatatacatacata 105427
>gb|AC101833.14| Mus musculus chromosome 1, clone RP24-496H15, complete sequence Length = 167684 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 153805 atacatacatatatatacatacata 153781
>gb|AC102510.5| Mus musculus chromosome 5, clone RP24-346C14, complete sequence Length = 180051 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 162971 atacatacatatatatacatacata 162995
>gb|AC005526.20| Mus musculus strain 129S6/SvEvTac clone rp21-455d14 map 15, complete sequence Length = 88442 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 48617 atacatacatatatatacatacata 48593
>emb|BX957253.12| Zebrafish DNA sequence from clone DKEY-234L14 in linkage group 7, complete sequence Length = 197310 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 55244 atacatacatatatatacatacata 55220
>gb|AC156613.9| Mus musculus chromosome 1, clone RP24-139P17, complete sequence Length = 132714 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 62878 atacatacatatatatacatacata 62902
>gb|AC165265.2| Mus musculus BAC clone RP23-15M14 from chromosome 13, complete sequence Length = 237830 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 230 tacatacatttatatacatacataacata 258 |||||||||||| |||||||||| ||||| Sbjct: 114007 tacatacatttacatacatacattacata 113979
>gb|AC153364.4| Mus musculus BAC clone RP23-35J21 from chromosome 10, complete sequence Length = 231668 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 169995 atacatacatatatatacatacata 170019
>emb|BX663608.26| Zebrafish DNA sequence from clone DKEY-223I19 in linkage group 7, complete sequence Length = 190528 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 139024 atacatacatatatatacatacata 139000
>emb|CR752649.9| Zebrafish DNA sequence from clone DKEY-238J13, complete sequence Length = 164233 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 111770 atacatacatatatatacatacata 111794
>emb|BX537131.17| Zebrafish DNA sequence from clone CH211-266K2 in linkage group 14, complete sequence Length = 140171 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 51283 atacatacatatatatacatacata 51259
>emb|CR954965.4| Mouse DNA sequence from clone RP23-19H11 on chromosome X, complete sequence Length = 176114 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 157219 atacatacatatatatacatacata 157243
>emb|CR382289.17| Zebrafish DNA sequence from clone DKEY-161J10 in linkage group 10, complete sequence Length = 187296 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 10819 atacatacatatatatacatacata 10843
>emb|Z99714.2|HS1048E9 Human DNA sequence from clone CTB-1048E9 on chromosome 22, complete sequence Length = 87646 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 23523 atacatacatatatatacatacata 23547
>emb|CR381612.5| Zebrafish DNA sequence from clone DKEY-274K7, complete sequence Length = 96276 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 14691 atacatacatatatatacatacata 14715
>emb|AL592309.24| Human DNA sequence from clone RP11-293F5 on chromosome 1 Contains a novel gene, a novel pseudogene, a novel gene similar to heparan sulfate 6-O-sulfotransferase 1 (HS6ST1), a pseudogene similar to part of a novel gene, the gene for a hypothetical protein AE2, a profilin 1 (PFN1) pseudogene, the 5' end of the ALPL gene for alkaline phosphatase, liver/bone/kidney and a CpG island, complete sequence Length = 206231 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 47709 atacatacatatatatacatacata 47685 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 47695 atacatacatatatatacatacata 47671
>emb|AL512642.18| Human DNA sequence from clone RP11-469L23 on chromosome 13 Contains the ALOX5AP gene for arachidonate 5-lipoxygenase-activating protein (FLAP) and a novel gene, complete sequence Length = 139255 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 13749 atacatacatatatatacatacata 13773
>emb|AL512600.5| Human DNA sequence from clone RP11-452A14 on chromosome 6, complete sequence Length = 141172 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 93720 atacatacatatatatacatacata 93696
>emb|AL445209.4| Human DNA sequence from clone RP11-52L5 on chromosome 13 Contains a transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) (TCEB1) pseudogene, a novel gene, the POU4F1 gene for POU domain, class 4, transcription factor 1 (BRN3A, RDC-1), the 3' end a novel gene (contains FLJ13449, possible ortholog of mouse 2810449K13Rik protein) and 3 CpG islands, complete sequence Length = 157302 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 aaaaagacacctgcatgtata 76 ||||||||||||||||||||| Sbjct: 56054 aaaaagacacctgcatgtata 56074
>gb|AC093450.20| Mus musculus strain C57BL/6J clone rp23-297j19 map 17, complete sequence Length = 202803 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 64914 atacatacatatatatacatacata 64938
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced Length = 1285452 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 645554 atacatacatatatatacatacata 645530
>emb|AL353811.12| Human DNA sequence from clone RP11-482I10 on chromosome 9, complete sequence Length = 190651 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 188549 atacatacatatatatacatacata 188573
>emb|AL354736.10| Human DNA sequence from clone RP11-205B18 on chromosome 13 Contains the 5' end of a novel gene (FLJ32909), complete sequence Length = 158460 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 130181 atacatacatatatatacatacata 130205
>emb|AL354681.8| Human DNA sequence from clone RP11-534L20 on chromosome 1 Contains the IKBKE gene for inhibitor of kappa light polypeptide gene enhancer in B-cells kinase epsilon, a novel gene, the 5' end of the RASSF5 gene for Ras association (RalGDS/AF-6) domain family 5, a ribosomal protein L7a (RPL7A) pseudogene and a CpG island, complete sequence Length = 107689 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 ttggcagcggcggctttggcg 550 ||||||||||||||||||||| Sbjct: 41219 ttggcagcggcggctttggcg 41199
>emb|AL353072.8| Human DNA sequence from clone RP11-489C13 on chromosome 1q31.1-31.3 Contains a translocase of inner mitochondrial membrane 17 homolog A (yeast) (TIMM17A) pseudogene, complete sequence Length = 171682 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 atacatacatttatatacata 249 ||||||||||||||||||||| Sbjct: 145666 atacatacatttatatacata 145646
>gb|AC115802.10| Mus musculus, clone RP23-408J7, complete sequence Length = 185710 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 153827 atacatacatatatatacatacata 153803
>emb|AL139081.21| Human DNA sequence from clone RP11-179A7 on chromosome 13 Contains parts of 2 novel genes and the RFC3 gene for replication factor C (activator 1) 3, 38kDa, complete sequence Length = 185602 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 119891 atacatacatatatatacatacata 119867
>gb|AC116320.5| Mus musculus chromosome 18 clone RP23-269B16, complete sequence Length = 195630 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 26098 atacatacatatatatacatacata 26122
>emb|AL157382.14| Human DNA sequence from clone RP13-62H24 on chromosome Xq21.1-21.33 Contains a ribosomal protein L7 (RPL7) pseudogene, complete sequence Length = 92160 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 87276 atacatacatatatatacatacata 87252
>emb|AL157812.5| Human DNA sequence from clone RP11-14B2 on chromosome 13q21.1-21.3 Contains GSSs and STSs, complete sequence Length = 166971 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 108442 atacatacatatatatacatacata 108418
>emb|AL137006.5| Human DNA sequence from clone RP1-233D9 on chromosome 6, complete sequence Length = 36113 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 3105 atacatacatatatatacatacata 3081
>emb|AL035593.11|HS310J6 Human DNA sequence from clone RP1-310J6 on chromosome 6q22.1-22.3 Contains the 3' end of the gene for a novel protein highly similar to FLJ30899, complete sequence Length = 87942 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 20894 atacatacatatatatacatacata 20870
>emb|AL008723.8|HS90G24 Human DNA sequence from clone RP1-90G24 on chromosome 22 Contains the 5' end of a novel gene, the RFPL2 gene for ret finger protein-like 2, a Immunoglobulin Lambda Light Chain C region (IGLC) pseudogene (IGLCOR22-1), the SLC5A4 gene for solute carrier family 5 (low affinity glucose cotransporter), member 4 and a pseudogene similar to part of cleavage and polyadenylation specific factor 1, 160kDa (CPSF1), complete sequence Length = 154414 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 22597 atacatacatatatatacatacata 22621
>emb|AL022145.1|HS423N22 Human DNA sequence from clone RP3-423N22 on chromosome 1q24-25 Contains part of the ASTN gene for astrotactin, complete sequence Length = 135007 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 aaaaagacacctgcatgtata 76 ||||||||||||||||||||| Sbjct: 30781 aaaaagacacctgcatgtata 30761
>emb|BX511111.16| Zebrafish DNA sequence from clone RP71-62I8 in linkage group 17, complete sequence Length = 123253 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 37329 atacatacatatatatacatacata 37305 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 37211 atacatacatatatatacatacata 37187
>gb|AC182632.2| Mus musculus BAC clone RP24-70C5 from chromosome y, complete sequence Length = 219872 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 171590 atacatacatatatatacatacata 171566
>gb|AC023049.14| Homo sapiens 3 BAC RP11-468F18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 117951 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 21108 atacatacatgtatatacatacata 21132
>gb|AC084324.8| Mus musculus Strain C57BL6/J chromosome 2 BAC, RP23-96L7 Complete Sequence, complete sequence Length = 205893 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 36307 atacatacatatatatacatacata 36331
>gb|AC159547.4| Mus musculus 6 BAC RP23-235P6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 204498 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 63177 atacatacatatatatacatacata 63201
>emb|AL929356.1|PFA929356 Plasmodium falciparum strain 3D7, chromosome 9; segment 2/5 Length = 335050 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 ||||||||||||||||| ||||||| Sbjct: 109118 atacatacatttatataaatacata 109142
>emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chromosome 5, segment 4/4 Length = 340552 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 ||||||||||||||||| ||||||| Sbjct: 168242 atacatacatttatatatatacata 168266
>emb|AL772146.4| Zebrafish DNA sequence from clone CH211-12P8 in linkage group 7 Contains part of a novel gene similar to SCRIB (scrribble), a novel gene similar to SIAHBP1 (fuse-binding protein-interacting repressor), a novel gene similar to HTR5A (5-hydroxytryptamine (serotonin) receptor 5A) and three CpG islands, complete sequence Length = 187241 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 54821 atacatacatatatatacatacata 54845
>emb|AL669837.3| Mouse DNA sequence from clone RP23-219P13 on chromosome 11 Contains the Hus1 gene for Hus1 homolog (S. pombe), the gene for a novel protein similar to sperm associated antigen 4 (Spag4), a novel gene and a CpG island, complete sequence Length = 113836 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 4645 atacatacatatatatacatacata 4669
>emb|AL645795.3| Zebrafish DNA sequence from clone BUSM1-31B14 in linkage group 6 Contains the hoxa10b, hoxa9b and hoxa2b genes for homeo box proteins, a novel gene for a protein similar to SRC-associated adaptor protein and a CpG island, complete sequence Length = 78000 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 22420 atacatacatctatatacatacata 22444
>emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2 Length = 384550 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 119698 atacatacatatatatacatacata 119722
>emb|BX294164.13| Zebrafish DNA sequence from clone CH211-266D19 in linkage group 24, complete sequence Length = 177516 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 104347 atacatacatatatatacatacata 104371
>emb|BX537273.16| Zebrafish DNA sequence from clone CH211-151F2 in linkage group 10, complete sequence Length = 167226 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 93884 atacatacatatatatacatacata 93908
>emb|BX510998.12| Zebrafish DNA sequence from clone CH211-272L18 in linkage group 12, complete sequence Length = 148753 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 125680 atacatacatatatatacatacata 125704
>emb|CR457484.9| Zebrafish DNA sequence from clone CH211-132F3 in linkage group 18, complete sequence Length = 169672 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 35521 atacatacatatatatacatacata 35497
>emb|CR626943.15| Zebrafish DNA sequence from clone DKEY-262D7 in linkage group 17, complete sequence Length = 185291 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 68345 atacatacatatatatacatacata 68369
>emb|CR376766.8| Zebrafish DNA sequence from clone CH211-71K24 in linkage group 13, complete sequence Length = 155126 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 34489 atacatacatatatatacatacata 34465 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 34132 atacatacatatatatacatacata 34108
>emb|AL596130.13| Mouse DNA sequence from clone RP23-209O5 on chromosome 11, complete sequence Length = 203000 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 36163 atacatacatatatatacatacata 36187
>gb|AC117419.5| Homo sapiens 3 BAC RP11-138C11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 63032 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 6752 atacatacatatatatacatacata 6776
>emb|AL604024.7| Mouse DNA sequence from clone RP23-421F23 on chromosome 11 Contains part of the Bcas3 gene for breast carcinoma amplified sequence 3, complete sequence Length = 217278 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 43955 atacatacatatatatacatacata 43979
>emb|AL603917.5| Mouse DNA sequence from clone RP23-107J13 on chromosome 11 Contains a novel gene, a glyoxalase 1 (Glo1) pseudogene and a pseudogene similar to part of nuclear pore membrane protein 121 Pom121, complete sequence Length = 212255 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 65385 atacatacatatatatacatacata 65361
>emb|CR450730.4| Zebrafish DNA sequence from clone DKEY-43P5 in linkage group 4, complete sequence Length = 121826 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 40543 atacatacatatatatacatacata 40567 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 40521 atacatacatatatatacatacata 40545 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 40499 atacatacatatatatacatacata 40523
>gb|AC063947.30| Homo sapiens 12 BAC RP11-350G24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 196877 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 185782 atacatacatatatatacatacata 185758
>emb|BX511252.17| Zebrafish DNA sequence from clone CH211-240E14 in linkage group 16, complete sequence Length = 137574 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 47118 atacatacatatatatacatacata 47094
>emb|CR846083.9| Zebrafish DNA sequence from clone DKEYP-34A6 in linkage group 14, complete sequence Length = 163337 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 34807 atacatacatatatatacatacata 34831
>emb|AL589699.4| Mouse DNA sequence from clone RP23-92G13 on chromosome 13 Contains the 3' end of the gene for a novel protein similar to KIAA0386, five novel genes, the Gmnn gene for geminin, gene PNAS-27, the Ttrap gene for Traf and Tnf receptor associated protein, the gene for a novel protein similar to KIAA0319, the gene for the ortholog of human and rat aldehyde dehydrogenase 5A1 (succinate-semialdehyde dehydrogenase) (ALDH5A1) (SSADH), the 5' end of the Gpld1 gene for glycosylphosphatidylinositol specific phospholipase D1 and four CpG islands, complete sequence Length = 256608 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 18275 atacatacatatatatacatacata 18251
>emb|AL645667.14| Mouse DNA sequence from clone RP23-316N16 on chromosome 13 contains the vomeronasal receptor 1 H1 pseudogene V1rh1, the V1rh3, V1ri4, V1ri7 and V1rh11 genes for vomeronasal receptors 1 H3, I4, I7 and H11, three vomeronasal receptors 1 H pseudogenes, a vomeronasal receptor 1 I pseudogene, an ABC transporter pseudogene, the gene for a novel vomeronasal receptor 1, I family member, a novel gene and two CpG islands, complete sequence Length = 179902 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 95518 atacatacatatatatacatacata 95494
>emb|AL591851.12| Mouse DNA sequence from clone RP23-43M4 on chromosome 13 Contains a novel gene, an X-linked lymphocyte-regulated 5 (Xlr5) pseudogene and the 5' end of the gene for novel protein similar to human C6orf32 (KIAA0386, DIFF48), complete sequence Length = 53867 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 25392 atacatacatatatatacatacata 25416
>emb|BX537343.8| Zebrafish DNA sequence from clone CH211-192A19 in linkage group 16, complete sequence Length = 59017 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 20929 atacatacatatatatacatacata 20953
>emb|BX323799.14| Zebrafish DNA sequence from clone CH211-159B19 in linkage group 13, complete sequence Length = 188145 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 tgatacatacatttatatacataca 251 |||||||||||| |||||||||||| Sbjct: 30230 tgatacatacatatatatacataca 30254
>emb|CR361570.15| Zebrafish DNA sequence from clone DKEY-148L23 in linkage group 13, complete sequence Length = 51161 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 tgatacatacatttatatacataca 251 |||||||||||| |||||||||||| Sbjct: 14708 tgatacatacatatatatacataca 14684
>emb|CR556697.5| Mouse DNA sequence from clone RP24-406I24 on chromosome X, complete sequence Length = 180845 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 142820 atacatacatatatatacatacata 142796
>emb|BX571703.10| Zebrafish DNA sequence from clone DKEY-188E21 in linkage group 20, complete sequence Length = 50908 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 29665 atacatacatatatatacatacata 29689
>emb|AL928834.15| Zebrafish DNA sequence from clone CH211-51E12 in linkage group 4 Contains the gene for a novel protein (zgc:56546), the gene for a novel protein similar to the Tctex-1 family, the gene for a novel protein similar to vertebrate tubby like protein 4 (TULP4), the gene for a novel protein similar to vertebrate mitochondrial ribosomal protein S10 (MRPS10), the 3' end of a novel gene, two novel genes and three CpG islands, complete sequence Length = 189764 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 169223 atacatacatatatatacatacata 169247
>emb|BX005124.7| Zebrafish DNA sequence from clone CH211-284A16 in linkage group 20 Contains the 5' end of the xrn2 gene for 5'-3' exoribonuclease 2, a novel gene and a CpG island, complete sequence Length = 148325 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 140421 atacatacatatatatacatacata 140397 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 140403 atacatacatatatatacatacata 140379 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 140351 atacatacatatatatacatacata 140327 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 97085 atacatacatatatatacatacata 97061
>emb|BX005003.10| Zebrafish DNA sequence from clone DKEY-241F8 in linkage group 13, complete sequence Length = 172889 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 80843 atacatacatatatatacatacata 80819
>gb|AC184104.1| Mus musculus chromosome UNK clone CH33-226F23, complete sequence Length = 191521 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 94265 atacatacatatatatacatacata 94289
>gb|AC161204.7| Mus musculus chromosome 3, clone RP23-479L7, complete sequence Length = 170814 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 ||||||| ||||||||||||||||| Sbjct: 43879 atacatatatttatatacatacata 43855
>emb|BX510651.9| Zebrafish DNA sequence from clone DKEY-232A10 in linkage group 23, complete sequence Length = 74936 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 70605 atacatacatatatatacatacata 70581
>emb|BX470231.8| Zebrafish DNA sequence from clone CH211-63H10 in linkage group 3, complete sequence Length = 180778 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 162045 atacatacatatatatacatacata 162069
>gb|AC163294.2| Mus musculus BAC clone RP23-187J1 from chromosome 9, complete sequence Length = 203706 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 63531 atacatacatatatatacatacata 63507
>gb|BC004270.1| Homo sapiens Ras association (RalGDS/AF-6) domain family 5, transcript variant 4, mRNA (cDNA clone MGC:10823 IMAGE:3613993), complete cds Length = 3498 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 ttggcagcggcggctttggcg 550 ||||||||||||||||||||| Sbjct: 36 ttggcagcggcggctttggcg 16
>gb|AC079601.25| Homo sapiens 12 BAC RP11-328C8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 96201 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 aaaaagacacctgcatgtata 76 ||||||||||||||||||||| Sbjct: 73984 aaaaagacacctgcatgtata 74004
>emb|BX927142.17| Zebrafish DNA sequence from clone DKEY-85G17 in linkage group 13, complete sequence Length = 140609 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aatgatacatacatttatatacatacata 253 |||||||||||||| || ||||||||||| Sbjct: 65282 aatgatacatacatatacatacatacata 65254
>emb|BX296538.9| Zebrafish DNA sequence from clone DKEY-275P19 in linkage group 25, complete sequence Length = 192787 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 47773 atacatacatatatatacatacata 47797
>gb|AF279873.4| Homo sapiens chromosome 8 clone RP1-25D10, RP1-273G13, RP1-103E7 map 8p21-p11, complete sequence Length = 301232 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 132277 atacatacatatatatacatacata 132253
>dbj|BS000651.1| Pan troglodytes chromosome Y clone: PTBY-012K02, complete sequence Length = 162358 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 118023 atacatacatatatatacatacata 118047
>dbj|BS000559.1| Pan troglodytes chromosome Y clone:PTB-473B14, complete sequences Length = 127252 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 108297 atacatacatatatatacatacata 108321
>dbj|BS000549.1| Pan troglodytes chromosome Y clone:PTB-240N05, complete sequences Length = 148562 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 40702 atacatacatatatatacatacata 40726
>dbj|AB236428.1| Pyrus communis Se-RNase gene for Se-RNase, complete cds Length = 1641 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 1589 atacatacatatatatacatacata 1613
>gb|AC021657.19| Homo sapiens 3 BAC RP11-490B19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170046 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 159855 atacatacatatatatacatacata 159831
>emb|AL928657.21| Zebrafish DNA sequence from clone CH211-194I10 in linkage group 3, complete sequence Length = 187734 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 62954 atacatacatatatatacatacata 62930
>emb|BX005378.13| Zebrafish DNA sequence from clone DKEY-40H20 in linkage group 5, complete sequence Length = 168015 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 121117 atacatacatatatatacatacata 121141
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 16574666 atacatacatatatatacatacata 16574642
>emb|BX571730.9| Zebrafish DNA sequence from clone DKEY-35I22 in linkage group 5, complete sequence Length = 160875 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 128947 atacatacatatatatacatacata 128971
>emb|BX470133.27| Zebrafish DNA sequence from clone DKEY-169N7 in linkage group 9, complete sequence Length = 178929 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 53601 atacatacatatatatacatacata 53577
>gb|AC091076.7| Homo sapiens chromosome 8, clone RP11-53M11, complete sequence Length = 162374 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 97372 atacatacatatatatacatacata 97348
>gb|AC087894.15| Homo sapiens 12 BAC RP11-749H20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169117 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 28436 atacatacatgtatatacatacata 28460
>gb|AC105129.4| Homo sapiens chromosome 15, clone RP11-349G13, complete sequence Length = 198295 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 115165 atacatacatatatatacatacata 115189
>gb|AC114283.2| Homo sapiens chromosome 5 clone CTD-2319M2, complete sequence Length = 154535 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 atacatacatttatatacatacata 253 |||||||||| |||||||||||||| Sbjct: 128228 atacatacatatatatacatacata 128204 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,702,004 Number of Sequences: 3902068 Number of extensions: 5702004 Number of successful extensions: 159093 Number of sequences better than 10.0: 595 Number of HSP's better than 10.0 without gapping: 623 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 153921 Number of HSP's gapped (non-prelim): 5166 length of query: 683 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 660 effective length of database: 17,143,297,704 effective search space: 11314576484640 effective search space used: 11314576484640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
