ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4p14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_421778.1| PREDICTED: Gallus gallus similar to Pancreatic ... 44 0.55
2ref|XM_557975.1| Anopheles gambiae str. PEST ENSANGP00000027329 ... 44 0.55
3gb|U39470.1| Caenorhabditis elegans cosmid T08H4, complete sequence 42 2.2
4gb|DP000012.1| Macropus eugenii target 1 genomic scaffold 42 2.2
5ref|XM_800450.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 2.2
6gb|AC009366.8| Drosophila melanogaster 3L BAC RP98-48E10 (Roswel... 42 2.2
7gb|AC023676.4| Drosophila melanogaster 3L BAC RP98-22C11 (Roswel... 42 2.2
8gb|AC122735.18| Mus musculus chromosome 3, clone RP23-215I1, com... 42 2.2
9ref|XM_625254.1| PREDICTED: Apis mellifera hypothetical protein ... 42 2.2
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
11dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
12dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
13gb|AC145409.3| Macropus eugenii clone ME_KBa-528O13, complete se... 42 2.2
14gb|AY109085.1| Zea mays PCO124752 mRNA sequence 42 2.2
15gb|AE003597.4| Drosophila melanogaster chromosome 3L, section 78... 42 2.2
16gb|AC157784.2| Mus musculus chromosome 18, clone RP24-163C18, co... 42 2.2
17gb|AC161932.5| Mus musculus chromosome 18, clone RP24-78F20, com... 42 2.2
18gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome 40 8.5
19gb|AE014834.1| Plasmodium falciparum 3D7 chromosome 10 section 6... 40 8.5
20gb|AC159635.2| Mus musculus BAC clone RP24-111I3 from chromosome... 40 8.5
21gb|AC107692.7| Mus musculus chromosome 3, clone RP24-387H23, com... 40 8.5
22gb|AY815601.1| Schistosoma japonicum SJCHGC05977 protein mRNA, c... 40 8.5
23gb|AC007255.4| Homo sapiens BAC clone RP11-550A18 from 7, comple... 40 8.5
24gb|AC133890.16| Mus musculus chromosome 10, clone RP23-339N24, c... 40 8.5
25gb|AC118689.16| Mus musculus chromosome 10, clone RP23-293N21, c... 40 8.5
26emb|CR318646.27| Zebrafish DNA sequence from clone DKEY-83F18 in... 40 8.5
27gb|AC122817.3| Mus musculus BAC clone RP23-241M6 from 16, comple... 40 8.5
28ref|XM_720249.1| Plasmodium yoelii yoelii str. 17XNL rhoptry pro... 40 8.5
29gb|AC119673.3| Homo sapiens chromosome 1 clone RP11-212H11, comp... 40 8.5
30emb|CR407560.11| Zebrafish DNA sequence from clone CH211-180L14,... 40 8.5
31dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 40 8.5
32gb|AC096763.2| Homo sapiens BAC clone RP11-625A6 from 4, complet... 40 8.5
33gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome 40 8.5
34gb|AC162378.2| Mus musculus BAC clone RP24-82K1 from chromosome ... 40 8.5
35gb|AC159232.2| Mus musculus BAC clone RP24-392E16 from chromosom... 40 8.5
36dbj|AK053186.1| Mus musculus 0 day neonate lung cDNA, RIKEN full... 40 8.5
37gb|AF325111.1|AF325111 Mus musculus aryl-hydrocarbon receptor (A... 40 8.5
38gb|AC011615.4|AC011615 Drosophila melanogaster, chromosome 3R, r... 40 8.5
39gb|AC145987.2| Pan troglodytes BAC clone RP43-165D6 from chromos... 40 8.5
40dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
41gb|AC099744.3| Papio anubis clone RP41-65E12, complete sequence 40 8.5
42gb|AE003713.3| Drosophila melanogaster chromosome 3R, section 51... 40 8.5
43gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 8.5
44emb|AL163152.4|CNS01RID Human chromosome 14 DNA sequence BAC R-9... 40 8.5
45gb|AC139316.4| Mus musculus BAC clone RP24-500I24 from 3, comple... 40 8.5
46gb|AC154370.1| Mus musculus BAC clone RP24-576A8 from 17, comple... 40 8.5
47dbj|AP006638.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 8.5
48emb|AL670544.7| Mouse DNA sequence from clone RP23-16G8 on chrom... 40 8.5
49emb|AL663091.13| Mouse DNA sequence from clone RP23-392P11 on ch... 40 8.5 
>ref|XM_421778.1| PREDICTED: Gallus gallus similar to Pancreatic lipase related protein
            1 precursor (LOC423916), mRNA
          Length = 5721

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 164  tgcaaaaggcacctatgtttctgcagtgaa 193
            |||||||||||||||||| | |||||||||
Sbjct: 2925 tgcaaaaggcacctatgtctgtgcagtgaa 2954
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>ref|XM_557975.1| Anopheles gambiae str. PEST ENSANGP00000027329 (ENSANGG00000023631),
            partial mRNA
          Length = 2682

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 486  tagtacaaagtttgctgatgaa 507
            ||||||||||||||||||||||
Sbjct: 2078 tagtacaaagtttgctgatgaa 2099
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>gb|U39470.1| Caenorhabditis elegans cosmid T08H4, complete sequence
          Length = 38006

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 321   ctcgttttccttttccttttc 341
             |||||||||||||||||||||
Sbjct: 36775 ctcgttttccttttccttttc 36755
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>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 375   ctatataatggtggttttttc 395
             |||||||||||||||||||||
Sbjct: 37484 ctatataatggtggttttttc 37504
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>ref|XM_800450.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053507507.30) partial mRNA
          Length = 2505

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 321 ctcgttttccttttccttttc 341
           |||||||||||||||||||||
Sbjct: 360 ctcgttttccttttccttttc 340
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>gb|AC009366.8| Drosophila melanogaster 3L BAC RP98-48E10 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 169841

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 326    tttccttttccttttcaggta 346
              |||||||||||||||||||||
Sbjct: 110286 tttccttttccttttcaggta 110266
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>gb|AC023676.4| Drosophila melanogaster 3L BAC RP98-22C11 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 179613

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 326   tttccttttccttttcaggta 346
             |||||||||||||||||||||
Sbjct: 63816 tttccttttccttttcaggta 63796
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>gb|AC122735.18| Mus musculus chromosome 3, clone RP23-215I1, complete sequence
          Length = 182999

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 170    aggcacctatgtttctgcagt 190
              |||||||||||||||||||||
Sbjct: 129279 aggcacctatgtttctgcagt 129299
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>ref|XM_625254.1| PREDICTED: Apis mellifera hypothetical protein LOC551564
           (LOC551564), mRNA
          Length = 735

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 33  attcgtgtggattgtctcctg 53
           |||||||||||||||||||||
Sbjct: 550 attcgtgtggattgtctcctg 530
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 594      accgaagttgaagtcttcgtcagctccct 622
                |||||||||||||||||| ||| ||||||
Sbjct: 32654355 accgaagttgaagtcttcatcaactccct 32654383



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 320     actcgttttccttttccttt 339
               ||||||||||||||||||||
Sbjct: 4014698 actcgttttccttttccttt 4014679
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>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0695H10
          Length = 136883

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 594    accgaagttgaagtcttcgtcagctccct 622
              |||||||||||||||||| ||| ||||||
Sbjct: 117150 accgaagttgaagtcttcatcaactccct 117178
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>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0490D09
          Length = 154430

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 594   accgaagttgaagtcttcgtcagctccct 622
             |||||||||||||||||| ||| ||||||
Sbjct: 17150 accgaagttgaagtcttcatcaactccct 17178
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>gb|AC145409.3| Macropus eugenii clone ME_KBa-528O13, complete sequence
          Length = 140426

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 375   ctatataatggtggttttttc 395
             |||||||||||||||||||||
Sbjct: 37484 ctatataatggtggttttttc 37504
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>gb|AY109085.1| Zea mays PCO124752 mRNA sequence
          Length = 805

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 493 aagtttgctgatgaaacttcc 513
           |||||||||||||||||||||
Sbjct: 74  aagtttgctgatgaaacttcc 94
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>gb|AE003597.4| Drosophila melanogaster chromosome 3L, section 78 of 83 of the complete
              sequence
          Length = 365612

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 326    tttccttttccttttcaggta 346
              |||||||||||||||||||||
Sbjct: 243178 tttccttttccttttcaggta 243158
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>gb|AC157784.2| Mus musculus chromosome 18, clone RP24-163C18, complete sequence
          Length = 182283

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 569   ggagtttaatgctttctgaca 589
             |||||||||||||||||||||
Sbjct: 33506 ggagtttaatgctttctgaca 33526
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>gb|AC161932.5| Mus musculus chromosome 18, clone RP24-78F20, complete sequence
          Length = 166896

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 569    ggagtttaatgctttctgaca 589
              |||||||||||||||||||||
Sbjct: 146832 ggagtttaatgctttctgaca 146852
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>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome
          Length = 2427734

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 288     atagttcatatacaaaacaa 307
               ||||||||||||||||||||
Sbjct: 1647764 atagttcatatacaaaacaa 1647783
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>gb|AE014834.1| Plasmodium falciparum 3D7 chromosome 10 section 6 of 7 of the complete
              sequence
          Length = 253001

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 322    tcgttttccttttccttttc 341
              ||||||||||||||||||||
Sbjct: 184328 tcgttttccttttccttttc 184309
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>gb|AC159635.2| Mus musculus BAC clone RP24-111I3 from chromosome 12, complete sequence
          Length = 168623

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   taaattgcagaaatgctaga 440
             ||||||||||||||||||||
Sbjct: 71204 taaattgcagaaatgctaga 71185
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>gb|AC107692.7| Mus musculus chromosome 3, clone RP24-387H23, complete sequence
          Length = 148965

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   agaagccaacaagtagaatc 459
             ||||||||||||||||||||
Sbjct: 53506 agaagccaacaagtagaatc 53487
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>gb|AY815601.1| Schistosoma japonicum SJCHGC05977 protein mRNA, complete cds
          Length = 1555

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 587 acaatcaaccgaagttgaag 606
           ||||||||||||||||||||
Sbjct: 490 acaatcaaccgaagttgaag 509
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>gb|AC007255.4| Homo sapiens BAC clone RP11-550A18 from 7, complete sequence
          Length = 157092

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 289  tagttcatatacaaaacaaaactg 312
            ||||||| ||||||||||||||||
Sbjct: 5384 tagttcaaatacaaaacaaaactg 5407
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>gb|AC133890.16| Mus musculus chromosome 10, clone RP23-339N24, complete sequence
          Length = 211758

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   acaaaacaaaactgcttaca 318
             ||||||||||||||||||||
Sbjct: 15898 acaaaacaaaactgcttaca 15917
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>gb|AC118689.16| Mus musculus chromosome 10, clone RP23-293N21, complete sequence
          Length = 163917

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 299    acaaaacaaaactgcttaca 318
              ||||||||||||||||||||
Sbjct: 102247 acaaaacaaaactgcttaca 102266
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>emb|CR318646.27| Zebrafish DNA sequence from clone DKEY-83F18 in linkage group 22,
             complete sequence
          Length = 224271

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   gttttccttttccttttcag 343
             ||||||||||||||||||||
Sbjct: 52084 gttttccttttccttttcag 52065
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>gb|AC122817.3| Mus musculus BAC clone RP23-241M6 from 16, complete sequence
          Length = 185702

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   tttctgcagtgaattaacgg 200
             ||||||||||||||||||||
Sbjct: 62333 tttctgcagtgaattaacgg 62352
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>ref|XM_720249.1| Plasmodium yoelii yoelii str. 17XNL rhoptry protein (PY04959) partial
            mRNA
          Length = 4680

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 322  tcgttttccttttccttttc 341
            ||||||||||||||||||||
Sbjct: 1322 tcgttttccttttccttttc 1303
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>gb|AC119673.3| Homo sapiens chromosome 1 clone RP11-212H11, complete sequence
          Length = 187660

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   acaaaacaaaactgcttaca 318
             ||||||||||||||||||||
Sbjct: 82396 acaaaacaaaactgcttaca 82415
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>emb|CR407560.11| Zebrafish DNA sequence from clone CH211-180L14, complete sequence
          Length = 127482

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    tatacaaaacaaaactgctt 315
              ||||||||||||||||||||
Sbjct: 100197 tatacaaaacaaaactgctt 100216
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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 322     tcgttttccttttccttttc 341
               ||||||||||||||||||||
Sbjct: 2897003 tcgttttccttttccttttc 2896984
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>gb|AC096763.2| Homo sapiens BAC clone RP11-625A6 from 4, complete sequence
          Length = 168710

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 79     gaatgtctaatatgtcacatatgt 102
              |||||| |||||||||||||||||
Sbjct: 114327 gaatgtataatatgtcacatatgt 114304
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>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome
          Length = 1176248

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 529    agatcagttttcgcaaatga 548
              ||||||||||||||||||||
Sbjct: 795643 agatcagttttcgcaaatga 795662
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>gb|AC162378.2| Mus musculus BAC clone RP24-82K1 from chromosome 16, complete sequence
          Length = 210112

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    acaaaacaaaactgcttaca 318
              ||||||||||||||||||||
Sbjct: 143555 acaaaacaaaactgcttaca 143536
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>gb|AC159232.2| Mus musculus BAC clone RP24-392E16 from chromosome 13, complete
             sequence
          Length = 169281

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 326   tttccttttccttttcaggt 345
             ||||||||||||||||||||
Sbjct: 75878 tttccttttccttttcaggt 75897
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>dbj|AK053186.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched
           library, clone:E030028J09 product:inferred: selective
           hybridizing clone, full insert sequence
          Length = 1612

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 324 gttttccttttccttttcag 343
           ||||||||||||||||||||
Sbjct: 951 gttttccttttccttttcag 932
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>gb|AF325111.1|AF325111 Mus musculus aryl-hydrocarbon receptor (Ahr) gene, complete cds
          Length = 74146

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   taaattgcagaaatgctaga 440
             ||||||||||||||||||||
Sbjct: 37229 taaattgcagaaatgctaga 37210
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>gb|AC011615.4|AC011615 Drosophila melanogaster, chromosome 3R, region 89D-89D, BAC clone
             BACR01H23, complete sequence
          Length = 199653

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 325   ttttccttttccttttcaggtaag 348
             ||||||||||||||||||| ||||
Sbjct: 72572 ttttccttttccttttcagctaag 72549
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>gb|AC145987.2| Pan troglodytes BAC clone RP43-165D6 from chromosome 7, complete sequence
          Length = 158415

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 289    tagttcatatacaaaacaaaactg 312
              ||||||| ||||||||||||||||
Sbjct: 132052 tagttcaaatacaaaacaaaactg 132075
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>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0013F10
          Length = 163095

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    actcgttttccttttccttt 339
              ||||||||||||||||||||
Sbjct: 136602 actcgttttccttttccttt 136583
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>gb|AC099744.3| Papio anubis clone RP41-65E12, complete sequence
          Length = 173295

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 289   tagttcatatacaaaacaaaactg 312
             ||||||| ||||||||||||||||
Sbjct: 91725 tagttcaaatacaaaacaaaactg 91748
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>gb|AE003713.3| Drosophila melanogaster chromosome 3R, section 51 of 118 of the
             complete sequence
          Length = 226561

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 325   ttttccttttccttttcaggtaag 348
             ||||||||||||||||||| ||||
Sbjct: 70740 ttttccttttccttttcagctaag 70717
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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 519     gttcaacattagatcagttt 538
               ||||||||||||||||||||
Sbjct: 1120466 gttcaacattagatcagttt 1120447
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>emb|AL163152.4|CNS01RID Human chromosome 14 DNA sequence BAC R-98N22 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 159772

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 199   ggaaatgatttcattntttctta 221
             ||||||||||||||| |||||||
Sbjct: 56898 ggaaatgatttcattctttctta 56876
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>gb|AC139316.4| Mus musculus BAC clone RP24-500I24 from 3, complete sequence
          Length = 187000

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    cacatatgtggtgaacatat 113
             ||||||||||||||||||||
Sbjct: 51198 cacatatgtggtgaacatat 51179
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>gb|AC154370.1| Mus musculus BAC clone RP24-576A8 from 17, complete sequence
          Length = 167763

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 322    tcgttttccttttccttttc 341
              ||||||||||||||||||||
Sbjct: 153497 tcgttttccttttccttttc 153516
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>dbj|AP006638.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT47I16, TM0208c,
             complete sequence
          Length = 48081

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   catatacaaaacaaaactgc 313
             ||||||||||||||||||||
Sbjct: 17950 catatacaaaacaaaactgc 17969
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>emb|AL670544.7| Mouse DNA sequence from clone RP23-16G8 on chromosome X, complete
              sequence
          Length = 236946

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     ctaatatgtcacatatgtgg 104
              ||||||||||||||||||||
Sbjct: 176171 ctaatatgtcacatatgtgg 176152
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>emb|AL663091.13| Mouse DNA sequence from clone RP23-392P11 on chromosome 2, complete
             sequence
          Length = 196078

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 325   ttttccttttccttttcagg 344
             ||||||||||||||||||||
Sbjct: 70041 ttttccttttccttttcagg 70022


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,069,470
Number of Sequences: 3902068
Number of extensions: 6069470
Number of successful extensions: 124086
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123814
Number of HSP's gapped (non-prelim): 272
length of query: 627
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 604
effective length of database: 17,143,297,704
effective search space: 10354551813216
effective search space used: 10354551813216
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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