| Clone Name | rbags4p07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_184994.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1859 Score = 442 bits (223), Expect = e-121 Identities = 427/495 (86%) Strand = Plus / Minus Query: 202 ctagaatgatttcttctcgtacgacactagcccgtggatgcctccctccacttgagctgc 261 |||||||| ||||||||||||||||||||||| || || || || || ||||| || || Sbjct: 1506 ctagaatgccttcttctcgtacgacactagcccatgtatccccccttcaacttgcgcggc 1447 Query: 262 gccggtcctcacctctaatcgaagagtctcagctcgtaaaagatcatgagctgactgcaa 321 ||| ||||||||||||||| | |||||| | ||| | || ||||||||||||||||| Sbjct: 1446 gccagtcctcacctctaatttgatagtctccgatcgcagcagctcatgagctgactgcaa 1387 Query: 322 agaggatgcaccaagatcttggaatccttgtttaacagcttgcattgtgtacggaataaa 381 ||| || ||||||||||||||||| ||||| ||||||||||||||||| || ||||| || Sbjct: 1386 agatgacgcaccaagatcttggaacccttgcttaacagcttgcattgtataaggaatgaa 1327 Query: 382 cctcagaacagaacctttgtcagctaccgctccaacaactccctgggcaactttaagctt 441 |||||| ||||||||||| ||||| || |||||||||||||||||||| ||||||||||| Sbjct: 1326 cctcagcacagaacctttatcagcaactgctccaacaactccctgggcgactttaagctt 1267 Query: 442 cagagtatcaccaagataccttgcatcgctcccctttgtcatggcttcgagggagcccat 501 || ||||| || || ||||| || || |||||||||||||| |||||||| |||||||| Sbjct: 1266 gagggtatcgcctaggtacctggcgtcactcccctttgtcattgcttcgagagagcccat 1207 Query: 502 gcctctgtacttttttactcggtggccgtccttgtattcataggccccaggagcctcatg 561 ||||| ||| ||||| || |||||||| |||||||| || || | |||||||| ||||| Sbjct: 1206 gcctcggtattttttaacacggtggccatccttgtactcgtaagtaccaggagcttcatg 1147 Query: 562 gctgccagccaagaaactgcccatcataacagttgatgcccccagtgacaaggccttcac 621 ||||||||||||||| || |||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 1146 gctgccagccaagaagctacccatcataacagtggatgcccccagagacaaagccttcac 1087 Query: 622 aatatgcccagagtatgaaataccaccatcagctataactggcacattctgatccttggc 681 |||||| ||||||| |||||| |||||||| || || ||||||||||| ||||| ||||| Sbjct: 1086 aatatgtccagagtttgaaattccaccatccgcaatgactggcacattgtgatctttggc 1027 Query: 682 atatgatgcaacctt 696 ||| ||||||||||| Sbjct: 1026 ataagatgcaacctt 1012
>dbj|AK061643.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B05, full insert sequence Length = 1018 Score = 442 bits (223), Expect = e-121 Identities = 427/495 (86%) Strand = Plus / Minus Query: 202 ctagaatgatttcttctcgtacgacactagcccgtggatgcctccctccacttgagctgc 261 |||||||| ||||||||||||||||||||||| || || || || || ||||| || || Sbjct: 664 ctagaatgccttcttctcgtacgacactagcccatgtatccccccttcaacttgcgcggc 605 Query: 262 gccggtcctcacctctaatcgaagagtctcagctcgtaaaagatcatgagctgactgcaa 321 ||| ||||||||||||||| | |||||| | ||| | || ||||||||||||||||| Sbjct: 604 gccagtcctcacctctaatttgatagtctccgatcgcagcagctcatgagctgactgcaa 545 Query: 322 agaggatgcaccaagatcttggaatccttgtttaacagcttgcattgtgtacggaataaa 381 ||| || ||||||||||||||||| ||||| ||||||||||||||||| || ||||| || Sbjct: 544 agatgacgcaccaagatcttggaacccttgcttaacagcttgcattgtataaggaatgaa 485 Query: 382 cctcagaacagaacctttgtcagctaccgctccaacaactccctgggcaactttaagctt 441 |||||| ||||||||||| ||||| || |||||||||||||||||||| ||||||||||| Sbjct: 484 cctcagcacagaacctttatcagcaactgctccaacaactccctgggcgactttaagctt 425 Query: 442 cagagtatcaccaagataccttgcatcgctcccctttgtcatggcttcgagggagcccat 501 || ||||| || || ||||| || || |||||||||||||| |||||||| |||||||| Sbjct: 424 gagggtatcgcctaggtacctggcgtcactcccctttgtcattgcttcgagagagcccat 365 Query: 502 gcctctgtacttttttactcggtggccgtccttgtattcataggccccaggagcctcatg 561 ||||| ||| ||||| || |||||||| |||||||| || || | |||||||| ||||| Sbjct: 364 gcctcggtattttttaacacggtggccatccttgtactcgtaagtaccaggagcttcatg 305 Query: 562 gctgccagccaagaaactgcccatcataacagttgatgcccccagtgacaaggccttcac 621 ||||||||||||||| || |||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 304 gctgccagccaagaagctacccatcataacagtggatgcccccagagacaaagccttcac 245 Query: 622 aatatgcccagagtatgaaataccaccatcagctataactggcacattctgatccttggc 681 |||||| ||||||| |||||| |||||||| || || ||||||||||| ||||| ||||| Sbjct: 244 aatatgtccagagtttgaaattccaccatccgcaatgactggcacattgtgatctttggc 185 Query: 682 atatgatgcaacctt 696 ||| ||||||||||| Sbjct: 184 ataagatgcaacctt 170
>dbj|AK065289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M23, full insert sequence Length = 2774 Score = 404 bits (204), Expect = e-109 Identities = 345/392 (88%) Strand = Plus / Minus Query: 305 tcatgagctgactgcaaagaggatgcaccaagatcttggaatccttgtttaacagcttgc 364 |||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||||| Sbjct: 1490 tcatgagctgactgcaaagatgacgcaccaagatcttggaacccttgcttaacagcttgc 1431 Query: 365 attgtgtacggaataaacctcagaacagaacctttgtcagctaccgctccaacaactccc 424 ||||| || ||||| |||||||| ||||||||||| ||||| || ||||||||||||||| Sbjct: 1430 attgtataaggaatgaacctcagcacagaacctttatcagcaactgctccaacaactccc 1371 Query: 425 tgggcaactttaagcttcagagtatcaccaagataccttgcatcgctcccctttgtcatg 484 ||||| ||||||||||| || ||||| || || ||||| || || |||||||||||||| Sbjct: 1370 tgggcgactttaagcttgagggtatcgcctaggtacctggcgtcactcccctttgtcatt 1311 Query: 485 gcttcgagggagcccatgcctctgtacttttttactcggtggccgtccttgtattcatag 544 |||||||| ||||||||||||| ||| ||||| || |||||||| |||||||| || || Sbjct: 1310 gcttcgagagagcccatgcctcggtattttttaacacggtggccatccttgtactcgtaa 1251 Query: 545 gccccaggagcctcatggctgccagccaagaaactgcccatcataacagttgatgccccc 604 | |||||||| |||||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 1250 gtaccaggagcttcatggctgccagccaagaagctacccatcataacagtggatgccccc 1191 Query: 605 agtgacaaggccttcacaatatgcccagagtatgaaataccaccatcagctataactggc 664 || ||||| |||||||||||||| ||||||| |||||| |||||||| || || |||||| Sbjct: 1190 agagacaaagccttcacaatatgtccagagtttgaaattccaccatccgcaatgactggc 1131 Query: 665 acattctgatccttggcatatgatgcaacctt 696 ||||| ||||| |||||||| ||||||||||| Sbjct: 1130 acattgtgatctttggcataagatgcaacctt 1099 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 202 ctagaatgatttcttctcgtacgacactagcccgtggatgcctccctccacttgagctgc 261 |||||||| ||||||||||||||||||||||| || || || || || ||||| || || Sbjct: 2421 ctagaatgccttcttctcgtacgacactagcccatgtatccccccttcaacttgcgcggc 2362 Query: 262 gccggtcctcacct 275 ||| |||||||||| Sbjct: 2361 gccagtcctcacct 2348
>gb|AY110974.1| Zea mays CL34483_1 mRNA sequence Length = 759 Score = 329 bits (166), Expect = 7e-87 Identities = 363/434 (83%) Strand = Plus / Minus Query: 263 ccggtcctcacctctaatcgaagagtctcagctcgtaaaagatcatgagctgactgcaaa 322 ||||| ||||||||||||| || ||||| | || |||||||| ||||||||||| | | Sbjct: 470 ccggttctcacctctaatctgagtgtctctgaccgcaaaagatcgtgagctgactggaga 411 Query: 323 gaggatgcaccaagatcttggaatccttgtttaacagcttgcattgtgtacggaataaac 382 || ||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||| Sbjct: 410 gaatctgcaccaagatcttgtaatccttgcttaactgcttgcattgtgtaaggaataaac 351 Query: 383 ctcagaacagaacctttgtcagctaccgctccaacaactccctgggcaactttaagcttc 442 ||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| |||||| Sbjct: 350 ctcagtacagaacctttgtcagctactgctccaacaacgccctgcgcgactttgagcttc 291 Query: 443 agagtatcaccaagataccttgcatcgctcccctttgtcatggcttcgagggagcccatg 502 || ||||||||||| ||||||||||| ||||| |||||||||||||| || ||||||||| Sbjct: 290 agtgtatcaccaaggtaccttgcatcactcccttttgtcatggcttcaagagagcccatg 231 Query: 503 cctctgtacttttttactcggtggccgtccttgtattcataggccccaggagcctcatgg 562 |||||||| |||||| |||||||||| || ||||| | |||||||| ||||| Sbjct: 230 cctctgtannnnnngactcggaggccgtccttatactcataagtaccaggagcttcatga 171 Query: 563 ctgccagccaagaaactgcccatcataacagttgatgcccccagtgacaaggccttcaca 622 || ||||| ||||||||||||||||| |||| || |||| || |||||| Sbjct: 170 ctaccagctnnnnngctgcccatcataacagtggatgnnnnnagcgacagagctttcaca 111 Query: 623 atatgcccagagtatgaaataccaccatcagctataactggcacattctgatccttggca 682 ||||||||||||| |||||| ||||||||||| ||||| || ||||| |||||||||||| Sbjct: 110 atatgcccagagtttgaaattccaccatcagcaataaccggtacattgtgatccttggca 51 Query: 683 tatgatgcaacctt 696 || |||| |||||| Sbjct: 50 taagatgaaacctt 37
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 240 bits (121), Expect = 5e-60 Identities = 202/229 (88%) Strand = Plus / Minus Query: 305 tcatgagctgactgcaaagaggatgcaccaagatcttggaatccttgtttaacagcttgc 364 |||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||||| Sbjct: 32065938 tcatgagctgactgcaaagatgacgcaccaagatcttggaacccttgcttaacagcttgc 32065879 Query: 365 attgtgtacggaataaacctcagaacagaacctttgtcagctaccgctccaacaactccc 424 ||||| || ||||| |||||||| ||||||||||| ||||| || ||||||||||||||| Sbjct: 32065878 attgtataaggaatgaacctcagcacagaacctttatcagcaactgctccaacaactccc 32065819 Query: 425 tgggcaactttaagcttcagagtatcaccaagataccttgcatcgctcccctttgtcatg 484 ||||| ||||||||||| || ||||| || || ||||| || || |||||||||||||| Sbjct: 32065818 tgggcgactttaagcttgagggtatcgcctaggtacctggcgtcactcccctttgtcatt 32065759 Query: 485 gcttcgagggagcccatgcctctgtacttttttactcggtggccgtcct 533 |||||||| ||||||||||||| ||| ||||| || |||||||| |||| Sbjct: 32065758 gcttcgagagagcccatgcctcggtattttttaacacggtggccatcct 32065710 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Minus Query: 548 ccaggagcctcatggctgccagccaagaaactgcccatcataacagttgatgcccccagt 607 |||||||| |||||||||||||||||||| || |||||||||||||| ||||||||||| Sbjct: 32064593 ccaggagcttcatggctgccagccaagaagctacccatcataacagtggatgcccccaga 32064534 Query: 608 gacaaggccttcacaatatgcccagagtatgaaataccaccatcagctataactggcaca 667 ||||| |||||||||||||| ||||||| |||||| |||||||| || || ||||||||| Sbjct: 32064533 gacaaagccttcacaatatgtccagagtttgaaattccaccatccgcaatgactggcaca 32064474 Query: 668 ttctgatccttggcatatgatgcaacctt 696 || ||||| |||||||| ||||||||||| Sbjct: 32064473 ttgtgatctttggcataagatgcaacctt 32064445 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 202 ctagaatgatttcttctcgtacgacactagcccgtggatgcctccctccacttgagctgc 261 |||||||| ||||||||||||||||||||||| || || || || || ||||| || || Sbjct: 32066869 ctagaatgccttcttctcgtacgacactagcccatgtatccccccttcaacttgcgcggc 32066810 Query: 262 gccggtcctcacct 275 ||| |||||||||| Sbjct: 32066809 gccagtcctcacct 32066796
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 240 bits (121), Expect = 5e-60 Identities = 202/229 (88%) Strand = Plus / Minus Query: 305 tcatgagctgactgcaaagaggatgcaccaagatcttggaatccttgtttaacagcttgc 364 |||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||||| Sbjct: 67063 tcatgagctgactgcaaagatgacgcaccaagatcttggaacccttgcttaacagcttgc 67004 Query: 365 attgtgtacggaataaacctcagaacagaacctttgtcagctaccgctccaacaactccc 424 ||||| || ||||| |||||||| ||||||||||| ||||| || ||||||||||||||| Sbjct: 67003 attgtataaggaatgaacctcagcacagaacctttatcagcaactgctccaacaactccc 66944 Query: 425 tgggcaactttaagcttcagagtatcaccaagataccttgcatcgctcccctttgtcatg 484 ||||| ||||||||||| || ||||| || || ||||| || || |||||||||||||| Sbjct: 66943 tgggcgactttaagcttgagggtatcgcctaggtacctggcgtcactcccctttgtcatt 66884 Query: 485 gcttcgagggagcccatgcctctgtacttttttactcggtggccgtcct 533 |||||||| ||||||||||||| ||| ||||| || |||||||| |||| Sbjct: 66883 gcttcgagagagcccatgcctcggtattttttaacacggtggccatcct 66835 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Minus Query: 548 ccaggagcctcatggctgccagccaagaaactgcccatcataacagttgatgcccccagt 607 |||||||| |||||||||||||||||||| || |||||||||||||| ||||||||||| Sbjct: 65718 ccaggagcttcatggctgccagccaagaagctacccatcataacagtggatgcccccaga 65659 Query: 608 gacaaggccttcacaatatgcccagagtatgaaataccaccatcagctataactggcaca 667 ||||| |||||||||||||| ||||||| |||||| |||||||| || || ||||||||| Sbjct: 65658 gacaaagccttcacaatatgtccagagtttgaaattccaccatccgcaatgactggcaca 65599 Query: 668 ttctgatccttggcatatgatgcaacctt 696 || ||||| |||||||| ||||||||||| Sbjct: 65598 ttgtgatctttggcataagatgcaacctt 65570 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 202 ctagaatgatttcttctcgtacgacactagcccgtggatgcctccctccacttgagctgc 261 |||||||| ||||||||||||||||||||||| || || || || || ||||| || || Sbjct: 67994 ctagaatgccttcttctcgtacgacactagcccatgtatccccccttcaacttgcgcggc 67935 Query: 262 gccggtcctcacct 275 ||| |||||||||| Sbjct: 67934 gccagtcctcacct 67921
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 240 bits (121), Expect = 5e-60 Identities = 202/229 (88%) Strand = Plus / Minus Query: 305 tcatgagctgactgcaaagaggatgcaccaagatcttggaatccttgtttaacagcttgc 364 |||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||||| Sbjct: 32156450 tcatgagctgactgcaaagatgacgcaccaagatcttggaacccttgcttaacagcttgc 32156391 Query: 365 attgtgtacggaataaacctcagaacagaacctttgtcagctaccgctccaacaactccc 424 ||||| || ||||| |||||||| ||||||||||| ||||| || ||||||||||||||| Sbjct: 32156390 attgtataaggaatgaacctcagcacagaacctttatcagcaactgctccaacaactccc 32156331 Query: 425 tgggcaactttaagcttcagagtatcaccaagataccttgcatcgctcccctttgtcatg 484 ||||| ||||||||||| || ||||| || || ||||| || || |||||||||||||| Sbjct: 32156330 tgggcgactttaagcttgagggtatcgcctaggtacctggcgtcactcccctttgtcatt 32156271 Query: 485 gcttcgagggagcccatgcctctgtacttttttactcggtggccgtcct 533 |||||||| ||||||||||||| ||| ||||| || |||||||| |||| Sbjct: 32156270 gcttcgagagagcccatgcctcggtattttttaacacggtggccatcct 32156222 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Minus Query: 548 ccaggagcctcatggctgccagccaagaaactgcccatcataacagttgatgcccccagt 607 |||||||| |||||||||||||||||||| || |||||||||||||| ||||||||||| Sbjct: 32155105 ccaggagcttcatggctgccagccaagaagctacccatcataacagtggatgcccccaga 32155046 Query: 608 gacaaggccttcacaatatgcccagagtatgaaataccaccatcagctataactggcaca 667 ||||| |||||||||||||| ||||||| |||||| |||||||| || || ||||||||| Sbjct: 32155045 gacaaagccttcacaatatgtccagagtttgaaattccaccatccgcaatgactggcaca 32154986 Query: 668 ttctgatccttggcatatgatgcaacctt 696 || ||||| |||||||| ||||||||||| Sbjct: 32154985 ttgtgatctttggcataagatgcaacctt 32154957 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 202 ctagaatgatttcttctcgtacgacactagcccgtggatgcctccctccacttgagctgc 261 |||||||| ||||||||||||||||||||||| || || || || || ||||| || || Sbjct: 32157381 ctagaatgccttcttctcgtacgacactagcccatgtatccccccttcaacttgcgcggc 32157322 Query: 262 gccggtcctcacct 275 ||| |||||||||| Sbjct: 32157321 gccagtcctcacct 32157308
>gb|AY433959.1| Nicotiana tabacum inosine-5'-phosphate dehydrogenase (guaB) mRNA, partial cds Length = 1676 Score = 168 bits (85), Expect = 2e-38 Identities = 289/357 (80%) Strand = Plus / Minus Query: 298 taaaagatcatgagctgactgcaaagaggatgcaccaagatcttggaatccttgtttaac 357 |||||||| |||||| || ||||| ||||| ||||| ||||| ||||||||||| || || Sbjct: 1329 taaaagatgatgagcagattgcaaggaggaagcacctagatcctggaatccttgctttac 1270 Query: 358 agcttgcattgtgtacggaataaacctcagaacagaacctttgtcagctaccgctccaac 417 |||||||||||| || ||||| ||| |||||| ||||||||| ||||| || | ||||| Sbjct: 1269 agcttgcattgtatagggaatgaacttcagaatagaacctttatcagcaactgaaccaac 1210 Query: 418 aactccctgggcaactttaagcttcagagtatcaccaagataccttgcatcgctcccctt 477 ||||||||| |||| || || || ||||||||| | || |||||||| ||||| || Sbjct: 1209 aactccctgagcaatctttagtttagcagtatcacccaagtatcttgcatcactcccttt 1150 Query: 478 tgtcatggcttcgagggagcccatgcctctgtacttttttactcggtggccgtccttgta 537 |||||| ||||| ||||| ||||| |||| || ||||| || || | || | ||| || Sbjct: 1149 tgtcattgcttccagggatcccatacctcgatattttttcacacgcagaccattcttata 1090 Query: 538 ttcataggccccaggagcctcatggctgccagccaagaaactgcccatcataacagttga 597 |||||| | |||||||| |||| || ||||||||||| || |||||||| |||||||| Sbjct: 1089 ttcatatgtgccaggagcttcattactaccagccaagaagcttcccatcatgacagttga 1030 Query: 598 tgcccccagtgacaaggccttcacaatatgcccagagtatgaaataccaccatcagc 654 ||| ||||| || || |||||||| ||||| |||| | |||||| ||||||||||| Sbjct: 1029 tgctcccagggataatgccttcacgatatggccaggatttgaaatcccaccatcagc 973
>gb|AF421559.1| Glycine max inosine-5'-monophosphate dehydrogenase-like protein mRNA, complete cds Length = 1472 Score = 153 bits (77), Expect = 9e-34 Identities = 203/245 (82%) Strand = Plus / Minus Query: 410 gctccaacaactccctgggcaactttaagcttcagagtatcaccaagataccttgcatcg 469 ||||||||||| ||||| |||| ||| ||||| |||||||| | |||||||||||| Sbjct: 969 gctccaacaaccccctgagcaatttttagctttgctgtatcacccaagtaccttgcatcg 910 Query: 470 ctcccctttgtcatggcttcgagggagcccatgcctctgtacttttttactcggtggccg 529 ||||| || ||||||||||| ||||| ||||| |||||||||||||| || || || || Sbjct: 909 ctccctttagtcatggcttctagggaacccattcctctgtactttttcacacgttgacca 850 Query: 530 tccttgtattcataggccccaggagcctcatggctgccagccaagaaactgcccatcata 589 | || || |||| ||||||||||||||| | || ||||| ||||| || ||||||||| Sbjct: 849 ttctgatacacataagccccaggagcctcaagactaccagctaagaagcttcccatcata 790 Query: 590 acagttgatgcccccagtgacaaggccttcacaatatgcccagagtatgaaataccacca 649 |||||||| || |||| |||||| ||||| |||||||| ||||||| ||| || |||||| Sbjct: 789 acagttgacgctcccaatgacaaagccttaacaatatgaccagagtttgagatgccacca 730 Query: 650 tcagc 654 ||||| Sbjct: 729 tcagc 725
>gb|BT014357.1| Lycopersicon esculentum clone 133634F, mRNA sequence Length = 1793 Score = 149 bits (75), Expect = 1e-32 Identities = 288/359 (80%) Strand = Plus / Minus Query: 302 agatcatgagctgactgcaaagaggatgcaccaagatcttggaatccttgtttaacagct 361 |||| |||||| ||||||| ||||| ||||| ||||| |||||||||||||| |||||| Sbjct: 1542 agatgatgagcagactgcagcgaggaagcacctagatcctggaatccttgttttacagct 1483 Query: 362 tgcattgtgtacggaataaacctcagaacagaacctttgtcagctaccgctccaacaact 421 |||||||| || |||| |||| ||||||||| ||| || ||||| |||| ||||| || Sbjct: 1482 tgcattgtataaggaacaaacttcagaacagtacccttatcagcaaccgaaccaacgaca 1423 Query: 422 ccctgggcaactttaagcttcagagtatcaccaagataccttgcatcgctcccctttgtc 481 ||||| |||| || || || ||||||||| | || ||||||||||| || |||||| Sbjct: 1422 ccctgagcaatctttagtttagcagtatcacccaagtatcttgcatcgcttccttttgtc 1363 Query: 482 atggcttcgagggagcccatgcctctgtacttttttactcggtggccgtccttgtattca 541 || ||||| | || ||||| |||| ||||| || || ||| | || | ||| | |||| Sbjct: 1362 attgcttccaaagatcccatacctcgatacttcttcacacggagaccattcttattttca 1303 Query: 542 taggccccaggagcctcatggctgccagccaagaaactgcccatcataacagttgatgcc 601 || | |||||||| |||| ||| ||||||||||| || |||||||| ||||||||||| Sbjct: 1302 taagtgccaggagcttcattgcttccagccaagaagctccccatcatgacagttgatgct 1243 Query: 602 cccagtgacaaggccttcacaatatgcccagagtatgaaataccaccatcagctataac 660 || || ||||| |||||||| ||||| ||||| | ||||| ||||||||||| ||||| Sbjct: 1242 ccaagcgacaatgccttcacgatatggccagaattagaaatcccaccatcagcgataac 1184
>emb|AJ010201.1|GMA010201 Glycine max mRNA for inosine monophosphate dehydrogenase Length = 2016 Score = 145 bits (73), Expect = 2e-31 Identities = 202/245 (82%) Strand = Plus / Minus Query: 410 gctccaacaactccctgggcaactttaagcttcagagtatcaccaagataccttgcatcg 469 ||||||||||| ||||| |||| ||| ||||| |||||||| | ||||||||||| Sbjct: 1467 gctccaacaaccccctgagcaatttttagctttgctgtatcacccaagtaccttgcatca 1408 Query: 470 ctcccctttgtcatggcttcgagggagcccatgcctctgtacttttttactcggtggccg 529 ||||| || ||||| ||||| ||||| ||||| ||||| |||||||| || || || || Sbjct: 1407 ctccctttagtcatagcttctagggaacccattcctctatactttttgacacgttgacca 1348 Query: 530 tccttgtattcataggccccaggagcctcatggctgccagccaagaaactgcccatcata 589 | || ||| |||| ||||||||||||||| |||| ||||||||||| || ||||||||| Sbjct: 1347 ttctgatatacataagccccaggagcctcaaggctaccagccaagaagcttcccatcata 1288 Query: 590 acagttgatgcccccagtgacaaggccttcacaatatgcccagagtatgaaataccacca 649 |||||||| || |||| |||||| ||||| |||||||| ||||||| || || |||||| Sbjct: 1287 acagttgacgctcccaatgacaaagccttaacaatatgaccagagttcgagatgccacca 1228 Query: 650 tcagc 654 ||||| Sbjct: 1227 tcagc 1223
>gb|AY193837.1| Vigna unguiculata inosine monophosphate dehydrogenase (impdh) mRNA, complete cds Length = 2053 Score = 123 bits (62), Expect = 8e-25 Identities = 197/242 (81%) Strand = Plus / Minus Query: 410 gctccaacaactccctgggcaactttaagcttcagagtatcaccaagataccttgcatcg 469 ||||||||||| ||||| |||| ||| ||||| |||||||| | ||||||||||| Sbjct: 1455 gctccaacaaccccctgagcaatttttagctttgctgtatcacccaagtaccttgcatca 1396 Query: 470 ctcccctttgtcatggcttcgagggagcccatgcctctgtacttttttactcggtggccg 529 ||||| || ||||| ||||| ||||| ||||| ||||| |||||||| || || || || Sbjct: 1395 ctccctttagtcatagcttctagggaacccatacctctatactttttgacacgttgacca 1336 Query: 530 tccttgtattcataggccccaggagcctcatggctgccagccaagaaactgcccatcata 589 | || ||| |||| || || |||||||||||||| ||||||||||| || ||||||||| Sbjct: 1335 ttctgatatacataagcacccggagcctcatggctaccagccaagaagcttcccatcata 1276 Query: 590 acagttgatgcccccagtgacaaggccttcacaatatgcccagagtatgaaataccacca 649 ||||||| || |||| ||| || ||||| |||||||| ||||||| ||| || |||||| Sbjct: 1275 gcagttgacgctcccaatgataaagccttaacaatatgaccagagtttgagatgccacca 1216 Query: 650 tc 651 || Sbjct: 1215 tc 1214
>gb|AC182660.2| Populus trichocarpa clone Pop1-125N19, complete sequence Length = 99621 Score = 97.6 bits (49), Expect = 5e-17 Identities = 163/201 (81%) Strand = Plus / Plus Query: 304 atcatgagctgactgcaaagaggatgcaccaagatcttggaatccttgtttaacagcttg 363 ||||||||| ||| ||||||||||||| |||||||| ||||||||||| || || ||||| Sbjct: 81767 atcatgagcagaccgcaaagaggatgcgccaagatcctggaatccttgcttgactgcttg 81826 Query: 364 cattgtgtacggaataaacctcagaacagaacctttgtcagctaccgctccaacaactcc 423 ||| ||||| || | | | ||| |||||||||||| ||||| || ||||| || ||||| Sbjct: 81827 catggtgtaaggtacatgcttcaaaacagaacctttatcagcaactgctcccacgactcc 81886 Query: 424 ctgggcaactttaagcttcagagtatcaccaagataccttgcatcgctcccctttgtcat 483 ||| |||| || ||||| ||||||||| | || ||| ||| ||||| || ||||| Sbjct: 81887 ctgagcaatctttagcttagcagtatcacccaagtatctttgatcactccctttagtcat 81946 Query: 484 ggcttcgagggagcccatgcc 504 ||||| |||||||||||||| Sbjct: 81947 tgcttcaagggagcccatgcc 81967 Score = 42.1 bits (21), Expect = 2.5 Identities = 90/113 (79%) Strand = Plus / Plus Query: 539 tcataggccccaggagcctcatggctgccagccaagaaactgcccatcataacagttgat 598 ||||| ||||||||||| ||| || ||||| || || || |||||||| ||||| ||| Sbjct: 82789 tcataagccccaggagcttcagtacttccagctaaaaagcttcccatcattacagtagat 82848 Query: 599 gcccccagtgacaaggccttcacaatatgcccagagtatgaaataccaccatc 651 ||||| || || ||| || |||||||| || ||| ||||||| |||||||| Sbjct: 82849 gccccaagcaccagggctttgacaatatgacctgagaatgaaatgccaccatc 82901
>gb|AY962822.1| Prunus armeniaca inosine-5'-monophosphate dehydrogenase mRNA, partial cds Length = 215 Score = 97.6 bits (49), Expect = 5e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 329 gcaccaagatcttggaatccttgtttaacagcttgcattgtgtacggaataaacctcaga 388 ||||||||||||||||| |||||||| ||||||||||||||||| || || ||| ||| | Sbjct: 169 gcaccaagatcttggaaaccttgtttcacagcttgcattgtgtaaggtatgaacttcaaa 110 Query: 389 acagaacctttgtcagctaccgctccaacaactccctgggcaactttaagctt 441 |||||||||||||| || || || ||||| || ||||| |||| ||| ||||| Sbjct: 109 acagaacctttgtctgcaactgccccaaccaccccctgtgcaattttcagctt 57
>gb|AF068844.1|AF068844 Prunus persica inosine-5'-monophosphate dehydrogenase mRNA, partial cds Length = 683 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Minus Query: 329 gcaccaagatcttggaatccttgtttaacagcttgcattgtgtacggaataaacctcaga 388 ||||||||||||||||| |||||||| |||||||| |||||||| || || ||| ||| | Sbjct: 224 gcaccaagatcttggaaaccttgtttcacagcttggattgtgtaaggtatgaacttcaaa 165 Query: 389 acagaacctttgtcagctaccgctccaacaactccctgggcaactttaagctt 441 |||||||||||||| || || || ||||| || ||||| |||| ||| ||||| Sbjct: 164 acagaacctttgtctgcaactgccccaaccaccccctgtgcaattttcagctt 112
>ref|NM_101501.1| Arabidopsis thaliana IMP dehydrogenase/ catalytic AT1G16350 mRNA, complete cds Length = 1509 Score = 63.9 bits (32), Expect = 7e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 308 tgagctgactgcaaagaggatgcaccaagatcttggaatccttgtttaacagcttgcatt 367 ||||| ||||||||||| || ||||| |||||||| || ||||| || || || |||||| Sbjct: 1403 tgagcagactgcaaagaagaagcaccgagatcttgaaaaccttgcttcacggcatgcatt 1344 Query: 368 gtgtacggaataaacctcagaacagaacctttgtcagctaccgctccaacaactcc 423 ||||| || |||||| ||| || || ||||| || || ||||||||||| ||||| Sbjct: 1343 gtgtatggtataaacttcaacactgagcctttatctgcaaccgctccaaccactcc 1288 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 536 tattcataggccccaggagcctcatggctgccagccaagaaactgcccatcataacagtt 595 ||||||||||| ||||||||||| ||| ||||||||||| || |||||||| || ||| Sbjct: 1175 tattcataggctccaggagcctcggtgcttccagccaagaagcttcccatcatcaccgtt 1116 Query: 596 gatgcccccag 606 ||||| ||||| Sbjct: 1115 gatgctcccag 1105
>dbj|AK118098.1| Arabidopsis thaliana At1g16350 mRNA for putative inosine-5'-monophosphate dehydrogenase, complete cds, clone: RAFL19-35-K17 Length = 1195 Score = 63.9 bits (32), Expect = 7e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 308 tgagctgactgcaaagaggatgcaccaagatcttggaatccttgtttaacagcttgcatt 367 ||||| ||||||||||| || ||||| |||||||| || ||||| || || || |||||| Sbjct: 954 tgagcagactgcaaagaagaagcaccgagatcttgaaaaccttgcttcacggcatgcatt 895 Query: 368 gtgtacggaataaacctcagaacagaacctttgtcagctaccgctccaacaactcc 423 ||||| || |||||| ||| || || ||||| || || ||||||||||| ||||| Sbjct: 894 gtgtatggtataaacttcaacactgagcctttatctgcaaccgctccaaccactcc 839 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 536 tattcataggccccaggagcctcatggctgccagccaagaaactgcccatcataacagtt 595 ||||||||||| ||||||||||| ||| ||||||||||| || |||||||| || ||| Sbjct: 726 tattcataggctccaggagcctcggtgcttccagccaagaagcttcccatcatcaccgtt 667 Query: 596 gatgcccccag 606 ||||| ||||| Sbjct: 666 gatgctcccag 656
>gb|AC006341.2|F3O9 Arabidopsis thaliana chromosome 1 BAC F3O9 sequence, complete sequence Length = 114498 Score = 63.9 bits (32), Expect = 7e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 308 tgagctgactgcaaagaggatgcaccaagatcttggaatccttgtttaacagcttgcatt 367 ||||| ||||||||||| || ||||| |||||||| || ||||| || || || |||||| Sbjct: 47676 tgagcagactgcaaagaagaagcaccgagatcttgaaaaccttgcttcacggcatgcatt 47617 Query: 368 gtgtacggaataaacctcagaacagaacctttgtcagctaccgctccaacaactcc 423 ||||| || |||||| ||| || || ||||| || || ||||||||||| ||||| Sbjct: 47616 gtgtatggtataaacttcaacactgagcctttatctgcaaccgctccaaccactcc 47561 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 536 tattcataggccccaggagcctcatggctgccagccaagaaactgcccatcataacagtt 595 ||||||||||| ||||||||||| ||| ||||||||||| || |||||||| || ||| Sbjct: 47355 tattcataggctccaggagcctcggtgcttccagccaagaagcttcccatcatcaccgtt 47296 Query: 596 gatgcccccag 606 ||||| ||||| Sbjct: 47295 gatgctcccag 47285
>ref|NM_106595.2| Arabidopsis thaliana IMP dehydrogenase/ catalytic AT1G79470 mRNA, complete cds Length = 1782 Score = 56.0 bits (28), Expect = 2e-04 Identities = 72/84 (85%), Gaps = 2/84 (2%) Strand = Plus / Minus Query: 581 cccatcataacagttgatgcccccagtgacaag-gccttcacaatatgcccagagtatga 639 |||||||||||||||||||| || || ||| || ||||| ||||| ||||| || | ||| Sbjct: 1229 cccatcataacagttgatgctccaag-gacgagagcctttacaatgtgccctgaatttga 1171 Query: 640 aataccaccatcagctataactgg 663 ||||||||||| ||||||||||| Sbjct: 1170 gataccaccatccgctataactgg 1147 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 306 catgagctgactgcaaagaggatgcaccaagatcttggaatccttgtttaacagcttgca 365 ||||||| || ||||| || || |||||||| |||||||| |||||||| || || |||| Sbjct: 1504 catgagcagattgcaaggaagaagcaccaaggtcttggaaaccttgtttcacggcgtgca 1445 Query: 366 ttgtgta 372 ||||||| Sbjct: 1444 ttgtgta 1438
>gb|BT000820.1| Arabidopsis thaliana putative inosine-5'-monophosphate dehydrogenase (At1g79470/T8K14_11) mRNA, complete cds Length = 1512 Score = 56.0 bits (28), Expect = 2e-04 Identities = 72/84 (85%), Gaps = 2/84 (2%) Strand = Plus / Minus Query: 581 cccatcataacagttgatgcccccagtgacaag-gccttcacaatatgcccagagtatga 639 |||||||||||||||||||| || || ||| || ||||| ||||| ||||| || | ||| Sbjct: 1133 cccatcataacagttgatgctccaag-gacgagagcctttacaatgtgccctgaatttga 1075 Query: 640 aataccaccatcagctataactgg 663 ||||||||||| ||||||||||| Sbjct: 1074 gataccaccatccgctataactgg 1051 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 306 catgagctgactgcaaagaggatgcaccaagatcttggaatccttgtttaacagcttgca 365 ||||||| || ||||| || || |||||||| |||||||| |||||||| || || |||| Sbjct: 1408 catgagcagattgcaaggaagaagcaccaaggtcttggaaaccttgtttcacggcgtgca 1349 Query: 366 ttgtgta 372 ||||||| Sbjct: 1348 ttgtgta 1342
>gb|AF462859.1|AF462859 Arabidopsis thaliana At1g79470/T8K14_11 mRNA, complete cds Length = 1797 Score = 56.0 bits (28), Expect = 2e-04 Identities = 72/84 (85%), Gaps = 2/84 (2%) Strand = Plus / Minus Query: 581 cccatcataacagttgatgcccccagtgacaag-gccttcacaatatgcccagagtatga 639 |||||||||||||||||||| || || ||| || ||||| ||||| ||||| || | ||| Sbjct: 1229 cccatcataacagttgatgctccaag-gacgagagcctttacaatgtgccctgaatttga 1171 Query: 640 aataccaccatcagctataactgg 663 ||||||||||| ||||||||||| Sbjct: 1170 gataccaccatccgctataactgg 1147 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 306 catgagctgactgcaaagaggatgcaccaagatcttggaatccttgtttaacagcttgca 365 ||||||| || ||||| || || |||||||| |||||||| |||||||| || || |||| Sbjct: 1504 catgagcagattgcaaggaagaagcaccaaggtcttggaaaccttgtttcacggcgtgca 1445 Query: 366 ttgtgta 372 ||||||| Sbjct: 1444 ttgtgta 1438
>gb|AC007202.3|T8K14 Arabidopsis thaliana chromosome 1 BAC T8K14 sequence, complete sequence Length = 80374 Score = 56.0 bits (28), Expect = 2e-04 Identities = 72/84 (85%), Gaps = 2/84 (2%) Strand = Plus / Minus Query: 581 cccatcataacagttgatgcccccagtgacaag-gccttcacaatatgcccagagtatga 639 |||||||||||||||||||| || || ||| || ||||| ||||| ||||| || | ||| Sbjct: 42667 cccatcataacagttgatgctccaag-gacgagagcctttacaatgtgccctgaatttga 42609 Query: 640 aataccaccatcagctataactgg 663 ||||||||||| ||||||||||| Sbjct: 42608 gataccaccatccgctataactgg 42585 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 306 catgagctgactgcaaagaggatgcaccaagatcttggaatccttgtttaacagcttgca 365 ||||||| || ||||| || || |||||||| |||||||| |||||||| || || |||| Sbjct: 43022 catgagcagattgcaaggaagaagcaccaaggtcttggaaaccttgtttcacggcgtgca 42963 Query: 366 ttgtgta 372 ||||||| Sbjct: 42962 ttgtgta 42956
>gb|L34684.1|ATHIMPDH Arabidopsis thaliana IMP dehydrogenase (IMPDH) gene exons 1-5, complete cds Length = 2056 Score = 56.0 bits (28), Expect = 2e-04 Identities = 72/84 (85%), Gaps = 2/84 (2%) Strand = Plus / Minus Query: 581 cccatcataacagttgatgcccccagtgacaag-gccttcacaatatgcccagagtatga 639 |||||||||||||||||||| || || ||| || ||||| ||||| ||||| || | ||| Sbjct: 1503 cccatcataacagttgatgctccaag-gacgagagcctttacaatgtgccctgaatttga 1445 Query: 640 aataccaccatcagctataactgg 663 ||||||||||| ||||||||||| Sbjct: 1444 gataccaccatccgctataactgg 1421 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 306 catgagctgactgcaaagaggatgcaccaagatcttggaatccttgtttaacagcttgca 365 ||||||| || ||||| || || |||||||| |||||||| |||||||| || || |||| Sbjct: 1858 catgagcagattgcaaggaagaagcaccaaggtcttggaaaccttgtttcacggcgtgca 1799 Query: 366 ttgtgta 372 ||||||| Sbjct: 1798 ttgtgta 1792
>gb|AY088810.1| Arabidopsis thaliana clone 95749 mRNA, complete sequence Length = 1736 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 306 catgagctgactgcaaagaggatgcaccaagatcttggaatccttgtttaacagcttgca 365 ||||||| || ||||| || || |||||||| |||||||| |||||||| || || |||| Sbjct: 1489 catgagcagattgcaaggaagaagcaccaaggtcttggaaaccttgtttcacggcgtgca 1430 Query: 366 ttgtgta 372 ||||||| Sbjct: 1429 ttgtgta 1423 Score = 48.1 bits (24), Expect = 0.040 Identities = 71/84 (84%), Gaps = 2/84 (2%) Strand = Plus / Minus Query: 581 cccatcataacagttgatgcccccagtgacaag-gccttcacaatatgcccagagtatga 639 |||||||||||||||||||| || || ||| || ||||| ||||| || || || | ||| Sbjct: 1214 cccatcataacagttgatgctccaag-gacgagagcctttacaatgtgacctgaatttga 1156 Query: 640 aataccaccatcagctataactgg 663 ||||||||||| ||||||||||| Sbjct: 1155 gataccaccatccgctataactgg 1132
>gb|AC157684.2| Xenopus tropicalis clone ISB1-162F14, complete sequence Length = 111177 Score = 48.1 bits (24), Expect = 0.040 Identities = 33/36 (91%) Strand = Plus / Minus Query: 481 catggcttcgagggagcccatgcctctgtacttttt 516 |||||| || || ||||||||||||||||||||||| Sbjct: 107849 catggcatccagtgagcccatgcctctgtacttttt 107814
>ref|NM_001017283.2| Xenopus tropicalis IMP (inosine monophosphate) dehydrogenase 1 (impdh1), mRNA Length = 2843 Score = 48.1 bits (24), Expect = 0.040 Identities = 33/36 (91%) Strand = Plus / Minus Query: 481 catggcttcgagggagcccatgcctctgtacttttt 516 |||||| || || ||||||||||||||||||||||| Sbjct: 1275 catggcatccagtgagcccatgcctctgtacttttt 1240
>gb|AC156246.2| Xenopus tropicalis clone ISB1-149P6, complete sequence Length = 58474 Score = 48.1 bits (24), Expect = 0.040 Identities = 33/36 (91%) Strand = Plus / Minus Query: 481 catggcttcgagggagcccatgcctctgtacttttt 516 |||||| || || ||||||||||||||||||||||| Sbjct: 47658 catggcatccagtgagcccatgcctctgtacttttt 47623
>emb|CR855714.2| Xenopus tropicalis finished cDNA, clone TGas108k24 Length = 2843 Score = 48.1 bits (24), Expect = 0.040 Identities = 33/36 (91%) Strand = Plus / Minus Query: 481 catggcttcgagggagcccatgcctctgtacttttt 516 |||||| || || ||||||||||||||||||||||| Sbjct: 1275 catggcatccagtgagcccatgcctctgtacttttt 1240
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 629 ccagagtatgaaataccaccatcagctataactgg 663 ||||||||| ||||||||||||||| |||||||| Sbjct: 16510 ccagagtatttaataccaccatcagcaataactgg 16476
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 629 ccagagtatgaaataccaccatcagctataactgg 663 ||||||||| ||||||||||||||| |||||||| Sbjct: 16511 ccagagtatttaataccaccatcagcaataactgg 16477
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 629 ccagagtatgaaataccaccatcagctataactgg 663 ||||||||| ||||||||||||||| |||||||| Sbjct: 16510 ccagagtatttaataccaccatcagcaataactgg 16476
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 gaatccttgtttaacagcttgc 364 |||||||||||||||||||||| Sbjct: 1269366 gaatccttgtttaacagcttgc 1269345
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 gaatccttgtttaacagcttgc 364 |||||||||||||||||||||| Sbjct: 1512354 gaatccttgtttaacagcttgc 1512333
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 gaatccttgtttaacagcttgc 364 |||||||||||||||||||||| Sbjct: 1347802 gaatccttgtttaacagcttgc 1347781
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 gaatccttgtttaacagcttgc 364 |||||||||||||||||||||| Sbjct: 1272777 gaatccttgtttaacagcttgc 1272756
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 gaatccttgtttaacagcttgc 364 |||||||||||||||||||||| Sbjct: 1275131 gaatccttgtttaacagcttgc 1275110
>gb|L28709.1|ECOCHAABC Escherichia coli cation transport protein (chaC), cation transport regulator (chaB), and calcium/proton antiporter (chaA)s, complete cds Length = 3900 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 343 gaatccttgtttaacagcttgc 364 |||||||||||||||||||||| Sbjct: 483 gaatccttgtttaacagcttgc 504
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 gaatccttgtttaacagcttgc 364 |||||||||||||||||||||| Sbjct: 1269081 gaatccttgtttaacagcttgc 1269060
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 gaatccttgtttaacagcttgc 364 |||||||||||||||||||||| Sbjct: 1810835 gaatccttgtttaacagcttgc 1810814
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 gaatccttgtttaacagcttgc 364 |||||||||||||||||||||| Sbjct: 1718899 gaatccttgtttaacagcttgc 1718878
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 gaatccttgtttaacagcttgc 364 |||||||||||||||||||||| Sbjct: 1175352 gaatccttgtttaacagcttgc 1175331
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 343 gaatccttgtttaacagcttgc 364 |||||||||||||||||||||| Sbjct: 1829637 gaatccttgtttaacagcttgc 1829658
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 343 gaatccttgtttaacagcttgc 364 |||||||||||||||||||||| Sbjct: 2061203 gaatccttgtttaacagcttgc 2061224
>ref|NM_001014369.1| Danio rerio si:dkey-31f5.7 (si:dkey-31f5.7), mRNA Length = 3115 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 581 cccatcataacagttgatgcccccagtgacaaggccttcac 621 |||||||| || || ||||||||||| ||||| |||||||| Sbjct: 1331 cccatcatcactgtcgatgcccccagagacaaagccttcac 1291
>dbj|AB126081.1| Homo sapiens genomic DNA, chromosome 21, PCR fragment for clone gap 2 (GAP2), MX1-D21S171 region, complete sequence Length = 27543 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 ctgcaaagaggatgcaccaag 336 ||||||||||||||||||||| Sbjct: 16289 ctgcaaagaggatgcaccaag 16309
>gb|BC091790.1| Danio rerio si:dkey-31f5.7, mRNA (cDNA clone MGC:113446 IMAGE:6906166), complete cds Length = 3115 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 581 cccatcataacagttgatgcccccagtgacaaggccttcac 621 |||||||| || || ||||||||||| ||||| |||||||| Sbjct: 1331 cccatcatcactgtcgatgcccccagagacaaagccttcac 1291
>emb|CT573074.1| Kuenenia stuttgartiensis genome fragment KUST_B (2 of 5) Length = 132284 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 598 tgcccccagtgacaaggccttcacaatatgccc 630 ||||||||| ||||| ||||| ||||||||||| Sbjct: 127129 tgcccccagggacaatgccttgacaatatgccc 127097
>emb|CR759813.6| Zebrafish DNA sequence from clone DKEY-150H10 in linkage group 18, complete sequence Length = 152902 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 573 agaaactgcccatcataacag 593 ||||||||||||||||||||| Sbjct: 72519 agaaactgcccatcataacag 72539
>gb|AC160027.16| Mus musculus 10 BAC RP23-192N23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207847 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 ggagcctcatggctgccagc 570 |||||||||||||||||||| Sbjct: 105094 ggagcctcatggctgccagc 105113
>ref|XM_594262.2| PREDICTED: Bos taurus similar to UDP glycosyltransferase 1 family, polypeptide A3 precursor (LOC516120), mRNA Length = 1023 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 590 acagttgatgcccccagtga 609 |||||||||||||||||||| Sbjct: 987 acagttgatgcccccagtga 968
>ref|XM_610075.2| PREDICTED: Bos taurus similar to UDP glycosyltransferase 1 family, polypeptide A3 precursor (LOC531577), mRNA Length = 828 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 590 acagttgatgcccccagtga 609 |||||||||||||||||||| Sbjct: 741 acagttgatgcccccagtga 722
>gb|AC160054.2| Gallus gallus BAC clone TAM32-10H18 from chromosome unknown, complete sequence Length = 173827 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 ggagcctcatggctgccagc 570 |||||||||||||||||||| Sbjct: 53721 ggagcctcatggctgccagc 53702
>gb|AC145894.3| Pan troglodytes BAC clone RP43-8D18 from 7, complete sequence Length = 199372 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 636 atgaaataccaccatcagctataa 659 ||||||| |||||||||||||||| Sbjct: 50655 atgaaatgccaccatcagctataa 50632
>gb|BC046868.1| Xenopus laevis inosine 5'-phosphate dehydrogenase 1, mRNA (cDNA clone MGC:52763 IMAGE:4684136), complete cds Length = 2878 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 cccatgcctctgtacttttt 516 |||||||||||||||||||| Sbjct: 1366 cccatgcctctgtacttttt 1347
>gb|AC146110.2| Pan troglodytes BAC clone RP43-22L15 from 7, complete sequence Length = 185754 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 636 atgaaataccaccatcagctataa 659 ||||||| |||||||||||||||| Sbjct: 62075 atgaaatgccaccatcagctataa 62052
>emb|AL645487.8| Human DNA sequence from clone RP11-310N1 on chromosome 1 Contains part of a novel gene, complete sequence Length = 3994 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tgactgcaaagaggatgcac 332 |||||||||||||||||||| Sbjct: 3379 tgactgcaaagaggatgcac 3398
>emb|AL390718.11| Human DNA sequence from clone RP11-502H18 on chromosome 1 Contains the 3' end of a novel gene, a novel gene, the QSCN6 gene for quiescin Q6 and a CpG island, complete sequence Length = 176123 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tgactgcaaagaggatgcac 332 |||||||||||||||||||| Sbjct: 1385 tgactgcaaagaggatgcac 1404
>emb|BX571868.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 10/17 Length = 345829 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 640 aataccaccatcagctataactgg 663 ||||||||||||||| |||||||| Sbjct: 91805 aataccaccatcagcaataactgg 91828
>emb|AL713915.10| Mouse DNA sequence from clone RP23-437C4 on chromosome 11 Contains part of the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila), complete sequence Length = 201133 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ttacagccttccatgtccat 33 |||||||||||||||||||| Sbjct: 107140 ttacagccttccatgtccat 107121
>gb|AC115282.2| Homo sapiens chromosome 3 clone RP11-122D19, complete sequence Length = 181061 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 agcccgtggatgcctccctccact 253 |||||||| ||||||||||||||| Sbjct: 141001 agcccgtgcatgcctccctccact 140978
>gb|AC109581.2| Homo sapiens chromosome 3 clone RP11-168H3, complete sequence Length = 155332 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 agcccgtggatgcctccctccact 253 |||||||| ||||||||||||||| Sbjct: 25451 agcccgtgcatgcctccctccact 25428
>dbj|AB035643.1| Bacillus cereus impdh gene for IMP dehydrogenase, complete cds Length = 2065 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 640 aataccaccatcagctataactgg 663 ||||||||||||||| |||||||| Sbjct: 1459 aataccaccatcagcaataactgg 1436
>ref|NM_057638.3| Drosophila melanogaster purity of essence CG14472-RA (poe), mRNA Length = 16183 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 664 cacattctgatccttggcat 683 |||||||||||||||||||| Sbjct: 12640 cacattctgatccttggcat 12621
>gb|AF096897.1|AF096897 Drosophila melanogaster pushover (push) mRNA, complete cds Length = 16135 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 664 cacattctgatccttggcat 683 |||||||||||||||||||| Sbjct: 12640 cacattctgatccttggcat 12621
>gb|AF096896.1|AF096896 Drosophila melanogaster pushover (push) gene, complete cds Length = 17595 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 664 cacattctgatccttggcat 683 |||||||||||||||||||| Sbjct: 13976 cacattctgatccttggcat 13957
>gb|AC007416.12|AC007416 Drosophila melanogaster, chromosome 2L, region 28B-28B, BAC clone BACR08I01, complete sequence Length = 169427 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 664 cacattctgatccttggcat 683 |||||||||||||||||||| Sbjct: 110623 cacattctgatccttggcat 110642
>gb|AC025016.8| Homo sapiens chromosome 11, clone RP11-302E22, complete sequence Length = 155661 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 cccagtgacaaggccttcac 621 |||||||||||||||||||| Sbjct: 13569 cccagtgacaaggccttcac 13550
>emb|BX548065.6| Mouse DNA sequence from clone RP23-163B21 on chromosome X, complete sequence Length = 225082 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 564 tgccagccaagaaactgccc 583 |||||||||||||||||||| Sbjct: 166768 tgccagccaagaaactgccc 166787
>gb|AE003619.3| Drosophila melanogaster chromosome 2L, section 28 of 83 of the complete sequence Length = 289516 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 664 cacattctgatccttggcat 683 |||||||||||||||||||| Sbjct: 236854 cacattctgatccttggcat 236873
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 640 aataccaccatcagctataactgg 663 ||||||||||||||| |||||||| Sbjct: 16380 aataccaccatcagcaataactgg 16357
>gb|AY390700.1| Pachymerus cardo cytochrome b (cytb) gene, partial cds; mitochondrial Length = 782 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ccttttattgttacagcctt 23 |||||||||||||||||||| Sbjct: 465 ccttttattgttacagcctt 484
>emb|AL611936.11| Mouse DNA sequence from clone RP23-40G2 on chromosome 4, complete sequence Length = 166167 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 gatgatgatgcccatgttac 83 |||||||||||||||||||| Sbjct: 65493 gatgatgatgcccatgttac 65474
>emb|AL772190.6| Mouse DNA sequence from clone RP23-124P7 on chromosome 2, complete sequence Length = 206240 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 acacacagaaaaccagtatg 177 |||||||||||||||||||| Sbjct: 163456 acacacagaaaaccagtatg 163475
>emb|AL844156.2| Mouse DNA sequence from clone RP23-274I9 on chromosome X, complete sequence Length = 148890 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 tgcaccaagatcttggaatc 347 |||||||||||||||||||| Sbjct: 35470 tgcaccaagatcttggaatc 35489
>emb|Y17920.1|DME17920 Drosophila melanogaster mRNA for calossin protein Length = 12373 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 664 cacattctgatccttggcat 683 |||||||||||||||||||| Sbjct: 8998 cacattctgatccttggcat 8979 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,852,610 Number of Sequences: 3902068 Number of extensions: 5852610 Number of successful extensions: 116183 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115693 Number of HSP's gapped (non-prelim): 475 length of query: 711 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 688 effective length of database: 17,143,297,704 effective search space: 11794588820352 effective search space used: 11794588820352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)