>gb|AY107952.1| Zea mays PCO096371 mRNA sequence
          Length = 1150

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 144/180 (80%)
 Strand = Plus / Minus

                                                                       
Query: 443 taataaagcctgacatcggctctttgagaggcagaaaaaccagactcgataagtgcacga 502
           ||||||||||| ||||| |||||||    |||||  |||||  ||||||||||||  |||
Sbjct: 687 taataaagcctcacatcagctctttctttggcagcgaaaccgaactcgataagtgatcga 628

                                                                       
Query: 503 atcggactgatcccctctgcagcggcgaacaggagcacggtctccgtgtcctcgggcgga 562
           |||| ||||||||||    | || ||||| | ||||||||||| || | | |||||||||
Sbjct: 627 atcgcactgatccccgtccccgccgcgaagatgagcacggtctgcgcgacgtcgggcgga 568

                                                                       
Query: 563 tttatgttctggatggcgaaccccgtccccttgacgggcccgatctccacaacatccccg 622
           |||||  | | || || ||||||| ||||| ||||||  |||| ||||||||||||||||
Sbjct: 567 tttatcctgtcgagggggaaccccttccccgtgacggcgccgagctccacaacatccccg 508

>ref|XM_465306.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1138

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                       
Query: 435 tggcagcgtaataaagcctgacatcggctctttgagaggcagaaaaaccagactcgataa 494
           ||||| |||||||||| |  ||||| |||||||||   |||| ||||||| |||| ||||
Sbjct: 626 tggcaccgtaataaagtcgtacatcagctctttgatccgcagcaaaaccaaactcaataa 567

                                 
Query: 495 gtgcacgaatcggactgatccc 516
           |||  |||| ||||||||||||
Sbjct: 566 gtgaccgaaccggactgatccc 545

>ref|XM_506797.1| PREDICTED Oryza sativa (japonica cultivar-group), P0622F08.20 mRNA
          Length = 1294

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                       
Query: 435 tggcagcgtaataaagcctgacatcggctctttgagaggcagaaaaaccagactcgataa 494
           ||||| |||||||||| |  ||||| |||||||||   |||| ||||||| |||| ||||
Sbjct: 665 tggcaccgtaataaagtcgtacatcagctctttgatccgcagcaaaaccaaactcaataa 606

                                 
Query: 495 gtgcacgaatcggactgatccc 516
           |||  |||| ||||||||||||
Sbjct: 605 gtgaccgaaccggactgatccc 584

>dbj|AK109330.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-C10, full
           insert sequence
          Length = 1138

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                       
Query: 435 tggcagcgtaataaagcctgacatcggctctttgagaggcagaaaaaccagactcgataa 494
           ||||| |||||||||| |  ||||| |||||||||   |||| ||||||| |||| ||||
Sbjct: 626 tggcaccgtaataaagtcgtacatcagctctttgatccgcagcaaaaccaaactcaataa 567

                                 
Query: 495 gtgcacgaatcggactgatccc 516
           |||  |||| ||||||||||||
Sbjct: 566 gtgaccgaaccggactgatccc 545

>dbj|AK104780.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C06, full
           insert sequence
          Length = 1138

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                       
Query: 435 tggcagcgtaataaagcctgacatcggctctttgagaggcagaaaaaccagactcgataa 494
           ||||| |||||||||| |  ||||| |||||||||   |||| ||||||| |||| ||||
Sbjct: 626 tggcaccgtaataaagtcgtacatcagctctttgatccgcagcaaaaccaaactcaataa 567

                                 
Query: 495 gtgcacgaatcggactgatccc 516
           |||  |||| ||||||||||||
Sbjct: 566 gtgaccgaaccggactgatccc 545

>dbj|AK068505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154E10, full
           insert sequence
          Length = 1294

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                       
Query: 435 tggcagcgtaataaagcctgacatcggctctttgagaggcagaaaaaccagactcgataa 494
           ||||| |||||||||| |  ||||| |||||||||   |||| ||||||| |||| ||||
Sbjct: 665 tggcaccgtaataaagtcgtacatcagctctttgatccgcagcaaaaccaaactcaataa 606

                                 
Query: 495 gtgcacgaatcggactgatccc 516
           |||  |||| ||||||||||||
Sbjct: 605 gtgaccgaaccggactgatccc 584

>gb|AC159229.2| Mus musculus BAC clone RP24-351I2 from chromosome 12, complete sequence
          Length = 134517

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 288   aaagtggatttcctattatcccattga 314
             |||||| ||||||||||||||||||||
Sbjct: 50260 aaagtgaatttcctattatcccattga 50234

>gb|AC009314.4| Homo sapiens BAC clone RP11-465K4 from 8, complete sequence
          Length = 161788

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 334   ttcctgaatattttctttttt 354
             |||||||||||||||||||||
Sbjct: 88440 ttcctgaatattttctttttt 88460

>gb|AC166107.4| Mus musculus BAC clone RP23-205A7 from chromosome 6, complete sequence
          Length = 177843

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 219    catggtctaaaaggactcca 238
              ||||||||||||||||||||
Sbjct: 120045 catggtctaaaaggactcca 120026

>gb|AC102143.10| Mus musculus chromosome 7, clone RP23-292M1, complete sequence
          Length = 169980

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   tcctgaatattttctttttt 354
             ||||||||||||||||||||
Sbjct: 28448 tcctgaatattttctttttt 28429

>gb|AC144817.3| Mus musculus BAC clone RP24-265M7 from chromosome 10, complete sequence
          Length = 141466

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   cctagaccattgaggccaaa 150
             ||||||||||||||||||||
Sbjct: 18387 cctagaccattgaggccaaa 18406

>emb|CR720593.2|CNS0GIYF Tetraodon nigroviridis full-length cDNA
          Length = 1239

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 470 gaggcagaaaaaccagactc 489
           ||||||||||||||||||||
Sbjct: 295 gaggcagaaaaaccagactc 314

>emb|CR715209.2|CNS0GET1 Tetraodon nigroviridis full-length cDNA
          Length = 678

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 470 gaggcagaaaaaccagactc 489
           ||||||||||||||||||||
Sbjct: 298 gaggcagaaaaaccagactc 317

>emb|CR714022.2|CNS0GDW2 Tetraodon nigroviridis full-length cDNA
          Length = 629

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 470 gaggcagaaaaaccagactc 489
           ||||||||||||||||||||
Sbjct: 242 gaggcagaaaaaccagactc 261

>emb|CR692281.2|CNS0FX45 Tetraodon nigroviridis full-length cDNA
          Length = 1204

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 470 gaggcagaaaaaccagactc 489
           ||||||||||||||||||||
Sbjct: 274 gaggcagaaaaaccagactc 293

>emb|CR674522.2|CNS0FJFK Tetraodon nigroviridis full-length cDNA
          Length = 1222

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 470 gaggcagaaaaaccagactc 489
           ||||||||||||||||||||
Sbjct: 280 gaggcagaaaaaccagactc 299

>emb|CR662762.2|CNS0FACW Tetraodon nigroviridis full-length cDNA
          Length = 1221

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 470 gaggcagaaaaaccagactc 489
           ||||||||||||||||||||
Sbjct: 279 gaggcagaaaaaccagactc 298

>gb|AC138263.8| Mus musculus chromosome 6, clone RP23-291O5, complete sequence
          Length = 206016

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    catggtctaaaaggactcca 238
              ||||||||||||||||||||
Sbjct: 203102 catggtctaaaaggactcca 203121

>emb|AL160165.17| Human DNA sequence from clone RP11-143F18 on chromosome 9 Contains the 5'
              end of the DDX31 gene for DEAD/H box polypeptide 31, the
              GTF3C4 gene for general transcription factor IIIC,
              polypeptide 4, the 3' end of gene FLJ32704, a novel gene
              and a CpG island, complete sequence
          Length = 139776

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 320    tgttccaagaaaggttcctgaatatttt 347
              ||||| |||||||| |||||||||||||
Sbjct: 128253 tgttctaagaaagggtcctgaatatttt 128280

>gb|AC159330.9| Mus musculus 10 BAC RP23-91L18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 224664

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    cctagaccattgaggccaaa 150
              ||||||||||||||||||||
Sbjct: 128189 cctagaccattgaggccaaa 128170

>gb|AC127343.3| Mus musculus BAC clone RP23-194I18 from chromosome 10, complete
             sequence
          Length = 198624

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   cctagaccattgaggccaaa 150
             ||||||||||||||||||||
Sbjct: 41252 cctagaccattgaggccaaa 41233

>gb|AC104185.2| Homo sapiens chromosome 3 clone RP11-268J19, complete sequence
          Length = 165918

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 617   tccccgacgtggagcttgca 636
             ||||||||||||||||||||
Sbjct: 64275 tccccgacgtggagcttgca 64256

>gb|AF381614.1|AF381614 Magnaporthe grisea clone BAC 14F6 gene sequence
          Length = 110467

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 338  tgaatattttcttttttgag 357
            ||||||||||||||||||||
Sbjct: 2217 tgaatattttcttttttgag 2236

>gb|AC155641.8| Mus musculus 10 BAC RP24-121N1 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 195480

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     tggaacaggaaaacaaacat 24
             ||||||||||||||||||||
Sbjct: 45567 tggaacaggaaaacaaacat 45548

>gb|AC073218.6| Homo sapiens BAC clone RP11-529E15 from 2, complete sequence
          Length = 150263

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    tgaatattttcttttttgag 357
              ||||||||||||||||||||
Sbjct: 130644 tgaatattttcttttttgag 130663

>gb|AC016647.7| Homo sapiens chromosome 16 clone RP11-89G14, complete sequence
          Length = 160358

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      ttggaacaggaaaacaaaca 23
              ||||||||||||||||||||
Sbjct: 105195 ttggaacaggaaaacaaaca 105176

>gb|AC002395.1| Homo sapiens 12 PAC RPCI1-315L5 (Roswell Park Cancer Institute Human PAC
              library) complete sequence
          Length = 155022

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 334    ttcctgaatattttcttttttgag 357
              |||||||||||||| |||||||||
Sbjct: 109114 ttcctgaatattttattttttgag 109091

>gb|AC147512.15| Mus musculus chromosome 10, clone RP23-464F18, complete sequence
          Length = 187826

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    cctagaccattgaggccaaa 150
              ||||||||||||||||||||
Sbjct: 158326 cctagaccattgaggccaaa 158345

>dbj|AP006635.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02F07, TM0101,
             complete sequence
          Length = 114487

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    gaaaacaaacatagccatcg 32
             ||||||||||||||||||||
Sbjct: 48411 gaaaacaaacatagccatcg 48392

>dbj|AP004917.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16A13, TM0075,
             complete sequence
          Length = 83881

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    gaaaacaaacatagccatcg 32
             ||||||||||||||||||||
Sbjct: 24726 gaaaacaaacatagccatcg 24745

>gb|AC170753.7| Mus musculus  BAC RP24-547D11 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 234156

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    cctagaccattgaggccaaa 150
              ||||||||||||||||||||
Sbjct: 159748 cctagaccattgaggccaaa 159729


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,299,500
Number of Sequences: 3902068
Number of extensions: 6299500
Number of successful extensions: 135145
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 135083
Number of HSP's gapped (non-prelim): 59
length of query: 664
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 641
effective length of database: 17,143,297,704
effective search space: 10988853828264
effective search space used: 10988853828264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)