ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags5e06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY946270.1| Zea mays 1-deoxy-D-xylulose 5-phosphate synthase 2 (dxs2) mRNA, partial cds Length = 1658 Score = 248 bits (125), Expect = 2e-62 Identities = 206/233 (88%) Strand = Plus / Minus Query: 387 agggacagcaccgtggcggcgatgtgcctcggcgtcagcccggccgcctccatctggtca 446 ||||||||||| |||||||||||||||| |||||||||||| ||| |||| |||||||| Sbjct: 1238 agggacagcacggtggcggcgatgtgccgcggcgtcagccctgcctcctcgatctggtcc 1179 Query: 447 tccgcggcgccgtggtcaatgtaccggtccggcaggaacatcgatctcagcttgaggggg 506 | || ||||| ||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1178 tgcggtgcgccatggtcgatgtaccggtccggcaggaacatggatctcagtttgaggggc 1119 Query: 507 ccatcgaggaggccgttgaggctgaggtagtgcgcgacgtgggagccaaaccctccgatg 566 || || ||||||||| | |||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 1118 ccgtccaggaggccggtcaggctgaggtagtgggcgacgtgggagccgaacccaccgatg 1059 Query: 567 gagccctcatcggcggtgatgaggatctcgtgctcggcggcgagctcgcggat 619 || ||||| ||||||||||| || | ||||||||||||||||||||| ||||| Sbjct: 1058 gatccctcctcggcggtgatcagcacctcgtgctcggcggcgagctcccggat 1006
>ref|XM_476952.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2870 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 459 tggtcaatgtaccggtccggcaggaacatcgatctcagcttgagggggccatcgaggagg 518 ||||| ||||||| ||| |||| |||||| || |||| |||||||||||||||||||||| Sbjct: 2221 tggtctatgtacctgtctggcaagaacatggacctcaacttgagggggccatcgaggagg 2162 Query: 519 ccgttgaggctgaggtagtgcgcgacgtgggagccaaaccctccgatggagccctcatcg 578 ||| |||||||||||||||| |||||||| || || |||||||||||||||||||| || Sbjct: 2161 ccgctgaggctgaggtagtgggcgacgtgagaaccgaaccctccgatggagccctcctcc 2102 Query: 579 gcggtgatgaggatctcgtgctcggcggcgagctcgcggat 619 | |||| ||||| |||||||||||| |||||||| ||||| Sbjct: 2101 acagtgacgaggacctcgtgctcggcagcgagctcccggat 2061
>dbj|AK100909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132G24, full insert sequence Length = 2870 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 459 tggtcaatgtaccggtccggcaggaacatcgatctcagcttgagggggccatcgaggagg 518 ||||| ||||||| ||| |||| |||||| || |||| |||||||||||||||||||||| Sbjct: 2221 tggtctatgtacctgtctggcaagaacatggacctcaacttgagggggccatcgaggagg 2162 Query: 519 ccgttgaggctgaggtagtgcgcgacgtgggagccaaaccctccgatggagccctcatcg 578 ||| |||||||||||||||| |||||||| || || |||||||||||||||||||| || Sbjct: 2161 ccgctgaggctgaggtagtgggcgacgtgagaaccgaaccctccgatggagccctcctcc 2102 Query: 579 gcggtgatgaggatctcgtgctcggcggcgagctcgcggat 619 | |||| ||||| |||||||||||| |||||||| ||||| Sbjct: 2101 acagtgacgaggacctcgtgctcggcagcgagctcccggat 2061
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 141 bits (71), Expect = 3e-30 Identities = 110/123 (89%) Strand = Plus / Minus Query: 497 cttgagggggccatcgaggaggccgttgaggctgaggtagtgcgcgacgtgggagccaaa 556 ||||||||||||||||||||||||| |||||||||||||||| |||||||| || || || Sbjct: 4855751 cttgagggggccatcgaggaggccgctgaggctgaggtagtgggcgacgtgagaaccgaa 4855692 Query: 557 ccctccgatggagccctcatcggcggtgatgaggatctcgtgctcggcggcgagctcgcg 616 |||||||||||||||||| || | |||| ||||| |||||||||||| |||||||| || Sbjct: 4855691 ccctccgatggagccctcctccacagtgacgaggacctcgtgctcggcagcgagctcccg 4855632 Query: 617 gat 619 ||| Sbjct: 4855631 gat 4855629
>dbj|AP005173.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0003E08 Length = 161095 Score = 141 bits (71), Expect = 3e-30 Identities = 110/123 (89%) Strand = Plus / Minus Query: 497 cttgagggggccatcgaggaggccgttgaggctgaggtagtgcgcgacgtgggagccaaa 556 ||||||||||||||||||||||||| |||||||||||||||| |||||||| || || || Sbjct: 41235 cttgagggggccatcgaggaggccgctgaggctgaggtagtgggcgacgtgagaaccgaa 41176 Query: 557 ccctccgatggagccctcatcggcggtgatgaggatctcgtgctcggcggcgagctcgcg 616 |||||||||||||||||| || | |||| ||||| |||||||||||| |||||||| || Sbjct: 41175 ccctccgatggagccctcctccacagtgacgaggacctcgtgctcggcagcgagctcccg 41116 Query: 617 gat 619 ||| Sbjct: 41115 gat 41113
>dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0002L09 Length = 146343 Score = 141 bits (71), Expect = 3e-30 Identities = 110/123 (89%) Strand = Plus / Minus Query: 497 cttgagggggccatcgaggaggccgttgaggctgaggtagtgcgcgacgtgggagccaaa 556 ||||||||||||||||||||||||| |||||||||||||||| |||||||| || || || Sbjct: 130264 cttgagggggccatcgaggaggccgctgaggctgaggtagtgggcgacgtgagaaccgaa 130205 Query: 557 ccctccgatggagccctcatcggcggtgatgaggatctcgtgctcggcggcgagctcgcg 616 |||||||||||||||||| || | |||| ||||| |||||||||||| |||||||| || Sbjct: 130204 ccctccgatggagccctcctccacagtgacgaggacctcgtgctcggcagcgagctcccg 130145 Query: 617 gat 619 ||| Sbjct: 130144 gat 130142
>gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0040B10, complete sequence Length = 150825 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 537 tgcgcgacgtgggagccaaaccctccgatggagccctcatcggcggtgatgaggatctcg 596 ||||||||||||||||| ||||| ||||||||||| || ||| |||||| ||| | |||| Sbjct: 141578 tgcgcgacgtgggagccgaacccgccgatggagccttcctcgacggtgaggagcacctcg 141637 Query: 597 tg 598 || Sbjct: 141638 tg 141639
>ref|XM_475227.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2658 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 537 tgcgcgacgtgggagccaaaccctccgatggagccctcatcggcggtgatgaggatctcg 596 ||||||||||||||||| ||||| ||||||||||| || ||| |||||| ||| | |||| Sbjct: 2456 tgcgcgacgtgggagccgaacccgccgatggagccttcctcgacggtgaggagcacctcg 2397 Query: 597 tg 598 || Sbjct: 2396 tg 2395
>gb|AC137620.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0014K18, complete sequence Length = 123508 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 537 tgcgcgacgtgggagccaaaccctccgatggagccctcatcggcggtgatgaggatctcg 596 ||||||||||||||||| ||||| ||||||||||| || ||| |||||| ||| | |||| Sbjct: 66128 tgcgcgacgtgggagccgaacccgccgatggagccttcctcgacggtgaggagcacctcg 66187 Query: 597 tg 598 || Sbjct: 66188 tg 66189
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 537 tgcgcgacgtgggagccaaaccctccgatggagccctcatcggcggtgatgaggatctcg 596 ||||||||||||||||| ||||| ||||||||||| || ||| |||||| ||| | |||| Sbjct: 19813504 tgcgcgacgtgggagccgaacccgccgatggagccttcctcgacggtgaggagcacctcg 19813563 Query: 597 tg 598 || Sbjct: 19813564 tg 19813565
>dbj|AK104851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A10, full insert sequence Length = 2522 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 537 tgcgcgacgtgggagccaaaccctccgatggagccctcatcggcggtgatgaggatctcg 596 ||||||||||||||||| ||||| ||||||||||| || ||| |||||| ||| | |||| Sbjct: 2080 tgcgcgacgtgggagccgaacccgccgatggagccttcctcgacggtgaggagcacctcg 2021 Query: 597 tg 598 || Sbjct: 2020 tg 2019
>dbj|AK064944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P14, full insert sequence Length = 2576 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 537 tgcgcgacgtgggagccaaaccctccgatggagccctcatcggcggtgatgaggatctcg 596 ||||||||||||||||| ||||| ||||||||||| || ||| |||||| ||| | |||| Sbjct: 2121 tgcgcgacgtgggagccgaacccgccgatggagccttcctcgacggtgaggagcacctcg 2062 Query: 597 tg 598 || Sbjct: 2061 tg 2060
>gb|AF024512.1|AF024512 Oryza sativa CLA1 transketolase-like protein (CLA1) mRNA, nuclear gene encoding putative chloroplast protein, partial cds Length = 1785 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 537 tgcgcgacgtgggagccaaaccctccgatggagccctcatcggcggtgatgaggatctcg 596 ||||||||||||||||| ||||| ||||||||||| || ||| |||||| ||| | |||| Sbjct: 1735 tgcgcgacgtgggagccgaacccgccgatggagccttcctcgacggtgaggagcacctcg 1676 Query: 597 tg 598 || Sbjct: 1675 tg 1674
>gb|BT009346.1| Triticum aestivum clone wlm4.pk0022.h2:fis, full insert mRNA sequence Length = 2433 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 395 caccgtggcggcgatgtgcctcggcgtcagcccggc 430 |||||| |||||||||||| ||||||||||||||| Sbjct: 2109 caccgtcgcggcgatgtgcgacggcgtcagcccggc 2074
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 597 tgctcggcggcgagctcgcggatg 620 |||||||||||||||||||||||| Sbjct: 280261 tgctcggcggcgagctcgcggatg 280238
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 597 tgctcggcggcgagctcgcggatg 620 |||||||||||||||||||||||| Sbjct: 56088 tgctcggcggcgagctcgcggatg 56065
>emb|BX005407.5| Zebrafish DNA sequence from clone CH211-222C22 in linkage group 5, complete sequence Length = 209796 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 89 catatggatgcatgcatatgtatgtatctat 119 |||||| ||| |||||||||||||||||||| Sbjct: 158936 catatgtatgtatgcatatgtatgtatctat 158966
>gb|AY110050.1| Zea mays CL392_1 mRNA sequence Length = 2624 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Minus Query: 540 gcgacgtgggagccaaaccctccgatggagccctcatcggcggtgatgaggatctcgtg 598 |||||||| ||||| ||||| ||||||||||| || || |||||||||| | |||||| Sbjct: 2269 gcgacgtgcgagccgaacccgccgatggagccttcctccacggtgatgagcacctcgtg 2211
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 accatatggatgcatgcatatg 108 |||||||||||||||||||||| Sbjct: 14150455 accatatggatgcatgcatatg 14150476
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 595 cgtgctcggcggcgagctcgcggatg 620 ||||||||||||||| |||||||||| Sbjct: 1018326 cgtgctcggcggcgacctcgcggatg 1018301
>gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0012F18, from chromosome 3, complete sequence Length = 122903 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 accatatggatgcatgcatatg 108 |||||||||||||||||||||| Sbjct: 24746 accatatggatgcatgcatatg 24767
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 accatatggatgcatgcatatg 108 |||||||||||||||||||||| Sbjct: 14145430 accatatggatgcatgcatatg 14145451
>gb|DQ235143.1| Azospirillum brasilense strain Yu62 TrpL (trpL) and TrpE (trpE) genes, complete cds Length = 3356 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 389 ggacagcaccgtggcggcgatg 410 |||||||||||||||||||||| Sbjct: 721 ggacagcaccgtggcggcgatg 700
>gb|U44127.2|ABU44127 Azospirillum brasilense leader peptide (TrpL) and anthranilate synthase TrpE(G) genes, complete cds Length = 3865 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 389 ggacagcaccgtggcggcgatg 410 |||||||||||||||||||||| Sbjct: 905 ggacagcaccgtggcggcgatg 884
>emb|AL807764.9| Mouse DNA sequence from clone RP23-400F8 on chromosome 4, complete sequence Length = 226637 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 91 tatggatgcatgcatatgtatgtatctatc 120 |||| |||||||||||||||||||| |||| Sbjct: 65807 tatgcatgcatgcatatgtatgtatgtatc 65778
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 595 cgtgctcggcggcgagctcgc 615 ||||||||||||||||||||| Sbjct: 3086713 cgtgctcggcggcgagctcgc 3086693 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 596 gtgctcggcggcgagctcgcggatg 620 ||||||||| ||||||||||||||| Sbjct: 2940754 gtgctcggccgcgagctcgcggatg 2940778 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 ctcgtgctcggcggcgagct 612 |||||||||||||||||||| Sbjct: 3068832 ctcgtgctcggcggcgagct 3068813
>ref|XM_953884.1| Neurospora crassa OR74A hypothetical protein (NCU09030.1) partial mRNA Length = 3081 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 gagggggccatcgaggaggcc 520 ||||||||||||||||||||| Sbjct: 1105 gagggggccatcgaggaggcc 1125
>ref|XM_331421.1| Neurospora crassa OR74A hypothetical protein (NCU09030.1) partial mRNA Length = 3081 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 gagggggccatcgaggaggcc 520 ||||||||||||||||||||| Sbjct: 1105 gagggggccatcgaggaggcc 1125
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 594 tcgtgctcggcggcgagctcg 614 ||||||||||||||||||||| Sbjct: 3174062 tcgtgctcggcggcgagctcg 3174042
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 595 cgtgctcggcggcgagctcgc 615 ||||||||||||||||||||| Sbjct: 147371 cgtgctcggcggcgagctcgc 147391 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 596 gtgctcggcggcgagctcgcggatg 620 ||||||||| ||||||||||||||| Sbjct: 68135 gtgctcggccgcgagctcgcggatg 68159 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 ctcgtgctcggcggcgagct 612 |||||||||||||||||||| Sbjct: 163642 ctcgtgctcggcggcgagct 163661
>gb|AY536438.1| Burkholderia pseudomallei FlhB (flhB) gene, complete cds Length = 1218 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 596 gtgctcggcggcgagctcgcggatg 620 ||||||||| ||||||||||||||| Sbjct: 936 gtgctcggccgcgagctcgcggatg 912
>emb|CT009710.8| Mouse DNA sequence from clone RP23-131M7 on chromosome 16, complete sequence Length = 220104 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tatggatgcatgcatatgtatgtat 115 |||| |||||||||||||||||||| Sbjct: 16598 tatgtatgcatgcatatgtatgtat 16622
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 595 cgtgctcggcggcgagctcgc 615 ||||||||||||||||||||| Sbjct: 3998986 cgtgctcggcggcgagctcgc 3999006 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 596 gtgctcggcggcgagctcgcggatg 620 ||||||||| ||||||||||||||| Sbjct: 3913737 gtgctcggccgcgagctcgcggatg 3913761 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 ctcgtgctcggcggcgagct 612 |||||||||||||||||||| Sbjct: 4015294 ctcgtgctcggcggcgagct 4015313
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 gacagcaccgtggcggcgatg 410 ||||||||||||||||||||| Sbjct: 128841 gacagcaccgtggcggcgatg 128821
>dbj|AP007172.1| Aspergillus oryzae RIB40 genomic DNA, SC206 Length = 343979 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 421 tcagcccggccgcctccatct 441 ||||||||||||||||||||| Sbjct: 329217 tcagcccggccgcctccatct 329197
>gb|AC137711.21| Mus musculus chromosome 5, clone RP23-282A16, complete sequence Length = 181459 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tatggatgcatgcatatgtatgtat 115 |||| |||||||||||||||||||| Sbjct: 84476 tatgtatgcatgcatatgtatgtat 84500
>gb|AC156017.2| Mus musculus BAC clone RP24-239B9 from chromosome 16, complete sequence Length = 166416 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tatggatgcatgcatatgtatgtat 115 |||| |||||||||||||||||||| Sbjct: 127240 tatgtatgcatgcatatgtatgtat 127264
>gb|AC007717.8|AC007717 Homo sapiens chromosome 18, clone RP11-315O17, complete sequence Length = 168787 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 atgcatatgtatgtatctatc 120 ||||||||||||||||||||| Sbjct: 99408 atgcatatgtatgtatctatc 99388
>gb|AC134620.4| Homo sapiens BAC clone RP11-1432C17 from 4, complete sequence Length = 80150 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtatc 116 ||||||||||||||||||||| Sbjct: 70684 atgcatgcatatgtatgtatc 70664
>emb|AL391517.3|CNS06C89 Human chromosome 14 DNA sequence BAC R-322L20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 165840 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 atgcatatgtatgtatctatc 120 ||||||||||||||||||||| Sbjct: 143071 atgcatatgtatgtatctatc 143051
>emb|AL358292.4|CNS05TDZ Human chromosome 14 DNA sequence BAC R-736P16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 180211 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 atgcatatgtatgtatctatc 120 ||||||||||||||||||||| Sbjct: 17825 atgcatatgtatgtatctatc 17805
>gb|AC123676.9| Mus musculus chromosome 1, clone RP23-275F9, complete sequence Length = 169201 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tatggatgcatgcatatgtatgtat 115 |||| |||||||||||||||||||| Sbjct: 102324 tatgtatgcatgcatatgtatgtat 102348
>gb|AF032048.1|ALSEB2MP2 Alouatta seniculus beta-2-microglobulin precursor, gene, exons 2 and 3 and complete cds Length = 1415 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 236 tgagtagggagcggcagcagcagtt 260 |||| |||||||||||||||||||| Sbjct: 727 tgagcagggagcggcagcagcagtt 751
>emb|CT009576.9| Mouse DNA sequence from clone RP23-36H10 on chromosome 16, complete sequence Length = 256007 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tatggatgcatgcatatgtatgtat 115 |||| |||||||||||||||||||| Sbjct: 227742 tatgtatgcatgcatatgtatgtat 227766
>gb|AC115749.12| Mus musculus chromosome 3, clone RP23-14C17, complete sequence Length = 230988 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 70067 atgcatgcatatgtatgtat 70048
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcccggccgcctccatctg 442 |||||||||||||||||||| Sbjct: 2769791 agcccggccgcctccatctg 2769772
>gb|AC120003.6| Mus musculus chromosome 8, clone RP24-148H22, complete sequence Length = 210466 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 140279 atgcatgcatatgtatgtat 140298
>gb|AC111060.5| Mus musculus chromosome 1, clone RP24-121I5, complete sequence Length = 138419 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtatctat 119 ||||||| |||||||||||||||| Sbjct: 8343 atgcatgtatatgtatgtatctat 8366
>gb|AC147502.2| Mus musculus BAC clone RP23-111N9 from chromosome 7, complete sequence Length = 202934 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 136688 atgcatgcatatgtatgtat 136669
>gb|AC140471.2| Mus musculus BAC clone RP24-400H5 from chromosome 19, complete sequence Length = 185153 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 137096 atgcatgcatatgtatgtat 137115
>gb|AC156554.13| Mus musculus chromosome 8, clone RP23-15O21, complete sequence Length = 221400 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 182500 atgcatgcatatgtatgtat 182481
>gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, complete sequence Length = 186062 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 122663 atgcatgcatatgtatgtat 122682
>gb|AC132371.2| Mus musculus BAC clone RP23-477D20 from chromosome 5, complete sequence Length = 193291 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 585 atgcatgcatatgtatgtat 604
>gb|AC124438.4| Mus musculus BAC clone RP24-260K9 from chromosome 7, complete sequence Length = 183326 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 12997 atgcatgcatatgtatgtat 12978
>gb|AC125147.4| Mus musculus BAC clone RP24-350A15 from chromosome 7, complete sequence Length = 184180 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 18643 atgcatgcatatgtatgtat 18662
>gb|AC098713.4| Mus musculus BAC clone RP23-2C16 from 5, complete sequence Length = 217286 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 212847 atgcatgcatatgtatgtat 212866
>emb|BX548003.29| Zebrafish DNA sequence from clone DKEY-97I5 in linkage group 9, complete sequence Length = 145468 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 4113 atgcatgcatatgtatgtat 4094
>emb|BX000357.7| Human DNA sequence from clone DAQB-256B5 on chromosome 6 Contains the GNL1 gene for guanine nucleotide binding protein-like 1, the PRR3 gene for proline-rich polypeptide 3, the ABCF1 gene for ATP-binding cassette, sub-family F (GCN20), member 1 and 2 CpG islands, complete sequence Length = 64172 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 63 atgcatgcatatgtatgtat 82
>emb|AL844213.2| Human DNA sequence from clone DAQB-352F19 on chromosome 6 Contains the TMPOP1 pseudogene for thymopoietin-like 1, the SUCLA2P pseudogene for succinate-CoA ligase, ADP-forming, beta subunit, the RANP1 pseudogene for RAN, member RAS oncogene family pseudogene 1, HLA-E gene for major histocompatibility complex, class I, E, and 6 CpG islands, complete sequence Length = 97630 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 95693 atgcatgcatatgtatgtat 95712
>emb|AL662822.4| Human DNA sequence from clone XXbac-17K10 on chromosome 6 contains a major histocompatibility complex class 1-related polypeptide sequence B (MICB) pseudogene, a thymopoietin (TMPO) pseudogene, a succinate-CoA ligase, ADP forming, beta subunit (SUCLA2) pseudogene, a RAN, member RAS oncogene family pseudogene, the HLA-E gene for major histocompatibility complex, class I, E and six CpG islands, complete sequence Length = 162948 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 152839 atgcatgcatatgtatgtat 152858
>emb|AL662800.4| Human DNA sequence from clone XXbac-249D20 on chromosome 6 contains the GNL1 gene for guanine nucleotide binding protein-like 1, the gene for CAT56 protein, the ABCF1 gene for ATP-binding cassette, subfamily F, member 1, the PPP1R10 gene for protein phosphatase 1, regulatory subunit 10, the MRPS18B gene for mitochondrial ribosomal protein S18B, two novel proteins, a prothymosin alpha (PTMA) pseudogene and four CpG islands, complete sequence Length = 151228 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 34724 atgcatgcatatgtatgtat 34743
>emb|AL035406.25|HS233K16 Human DNA sequence from clone RP1-233K16 on chromosome 1p36.21-36.33 Contains the 5' end of the NPHP4 gene for nephronophthisis 4, the KCNAB2 gene for potassium voltage-gated channel, shaker-related subfamily, beta member 2, the 3' end of the CHD5 gene for chromodomain helicase DNA binding protein 5 and a CpG island, complete sequence Length = 161651 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 gacccacaagggacagcacc 398 |||||||||||||||||||| Sbjct: 18999 gacccacaagggacagcacc 18980
>emb|AL008722.16|HS732E4 Human DNA sequence from clone CTA-732E4 on chromosome 22q12.1 Contains ESTs, STSs and GSSs, complete sequence Length = 90497 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 71626 atgcatgcatatgtatgtat 71645
>emb|CR352233.9| Zebrafish DNA sequence from clone CH211-193J5 in linkage group 13, complete sequence Length = 149899 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 gtggtcaatgtaccggtccg 477 |||||||||||||||||||| Sbjct: 88748 gtggtcaatgtaccggtccg 88729
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 597 tgctcggcggcgagctcgcggatg 620 |||||||||||||| ||||||||| Sbjct: 192602 tgctcggcggcgagttcgcggatg 192579
>emb|CR936927.1| Human DNA sequence from clone DAMC-32J6 on chromosome 6, complete sequence Length = 44783 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 22100 atgcatgcatatgtatgtat 22119
>emb|AL645566.15| Mouse DNA sequence from clone RP23-398M13 on chromosome 11 Contains a CpG island, complete sequence Length = 192808 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 120688 atgcatgcatatgtatgtat 120669
>emb|BX649413.8| Mouse DNA sequence from clone RP23-193P21 on chromosome 4 Contains the 5' end of the Dbccr1 gene for deleted in bladder cancer 1, complete sequence Length = 186197 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 tgcatgcatatgtatgtatctatc 120 ||||||||||||||||||| |||| Sbjct: 175410 tgcatgcatatgtatgtatatatc 175387
>emb|AL645970.15| Mouse DNA sequence from clone DN-258M5 on chromosome 3, complete sequence Length = 141160 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 131246 atgcatgcatatgtatgtat 131265
>emb|CR759912.6| Human DNA sequence from clone DAAP-394O23 on chromosome 6, complete sequence Length = 47462 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 27616 atgcatgcatatgtatgtat 27635
>gb|AC069524.18| Homo sapiens 3 BAC RP11-181C6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161806 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 105501 atgcatgcatatgtatgtat 105482
>gb|AC092993.3| Homo sapiens 3 BAC RP11-649C16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147859 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 80569 atgcatgcatatgtatgtat 80588
>emb|CR751550.1| Human DNA sequence from clone DASS-94P17 on chromosome 6, complete sequence Length = 10086 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 8051 atgcatgcatatgtatgtat 8070
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 436 ccatctggtcatccgcggcgccgtggtc 463 ||||| ||||||| |||||||||||||| Sbjct: 811154 ccatcgggtcatcggcggcgccgtggtc 811181
>gb|AC158506.9| Pan troglodytes clone rp43-145f17, complete sequence Length = 155707 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 85518 atgcatgcatatgtatgtat 85537
>emb|CR388372.6| Human DNA sequence from clone DADB-87H23 on chromosome 6, complete sequence Length = 70448 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 29711 atgcatgcatatgtatgtat 29730
>gb|AC112198.2| Homo sapiens chromosome 5 clone RP11-45H22, complete sequence Length = 194079 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gaattggcagaaatgacact 144 |||||||||||||||||||| Sbjct: 49120 gaattggcagaaatgacact 49139
>gb|AC013807.9| Homo sapiens chromosome , clone RP11-21B14, complete sequence Length = 188367 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catatgtatgtatctatcca 122 |||||||||||||||||||| Sbjct: 98141 catatgtatgtatctatcca 98122
>emb|BX927220.8| Human DNA sequence from clone DAMA-199F12 on chromosome 6, complete sequence Length = 82724 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 22672 atgcatgcatatgtatgtat 22691
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 581 ggtgatgaggatctcgtgctcggcggcgagct 612 |||||| ||||||||||||||| |||||||| Sbjct: 5050442 ggtgatcaggatctcgtgctcgttggcgagct 5050411
>ref|NM_062967.1| Caenorhabditis elegans T14B4.5 (T14B4.5) mRNA, complete cds Length = 585 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 catatggatgcatgcatatgtatg 112 |||||||||||||| ||||||||| Sbjct: 147 catatggatgcatggatatgtatg 170
>gb|AC016045.8|AC016045 Homo sapiens chromosome 15 clone RP11-96N2 map 15q21, complete sequence Length = 164868 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 atgcatatgtatgtatctat 119 |||||||||||||||||||| Sbjct: 152790 atgcatatgtatgtatctat 152809
>gb|AC156459.2| Mus musculus BAC clone RP23-269A9 from chromosome 13, complete sequence Length = 188142 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 9354 atgcatgcatatgtatgtat 9373
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 599 ctcggcggcgagctcgcgga 618 |||||||||||||||||||| Sbjct: 3707095 ctcggcggcgagctcgcgga 3707114
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 1407640 atgcatgcatatgtatgtat 1407621
>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region Length = 1750601 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 982958 atgcatgcatatgtatgtat 982939
>gb|AC010436.4|AC010436 Homo sapiens chromosome 5 clone CTD-2214G1, complete sequence Length = 118396 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 gaattggcagaaatgacact 144 |||||||||||||||||||| Sbjct: 47967 gaattggcagaaatgacact 47948
>gb|AE004979.1| Halobacterium sp. NRC-1 section 10 of 170 of the complete genome Length = 10672 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 598 gctcggcggcgagctcgcgg 617 |||||||||||||||||||| Sbjct: 1051 gctcggcggcgagctcgcgg 1032
>emb|AL772303.11| Mouse DNA sequence from clone RP23-185P20 on chromosome 2, complete sequence Length = 202001 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 60953 atgcatgcatatgtatgtat 60972
>emb|AL672015.7| Mouse DNA sequence from clone RP23-154O12 on chromosome X, complete sequence Length = 194287 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 atatggatgcatgcatatgtatgt 113 ||||||||||||||||||| |||| Sbjct: 37545 atatggatgcatgcatatgcatgt 37522
>emb|AJ007559.1|CRE7559 Chlamydomonas reinhardtii mRNA for 1-deoxy-D-xylulose-5-phosphate synthase, partial Length = 3232 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 454 cgccgtggtcaatgtaccggtccggcag 481 |||||||||| ||||| ||||||||||| Sbjct: 2220 cgccgtggtcgatgtagcggtccggcag 2193
>emb|CR925743.18| Zebrafish DNA sequence from clone CH211-107N13 in linkage group 20, complete sequence Length = 161957 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 gtggtcaatgtaccggtccg 477 |||||||||||||||||||| Sbjct: 84222 gtggtcaatgtaccggtccg 84241
>gb|AC123621.10| Mus musculus chromosome 19, clone RP23-74D13, complete sequence Length = 197720 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 184979 atgcatgcatatgtatgtat 184960
>dbj|AP001181.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-2M23, complete sequence Length = 121755 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 catatgtatgtatctatcca 122 |||||||||||||||||||| Sbjct: 27376 catatgtatgtatctatcca 27395
>dbj|AP000790.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-736I10, complete sequence Length = 176944 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 catatgtatgtatctatcca 122 |||||||||||||||||||| Sbjct: 164692 catatgtatgtatctatcca 164711
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 597 tgctcggcggcgagctcgcggatg 620 |||||||| ||||||||||||||| Sbjct: 3616269 tgctcggccgcgagctcgcggatg 3616292
>gb|AC004209.1|AC004209 Homo sapiens clone UWGC:y55c025 from 6p21, complete sequence Length = 43600 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 33094 atgcatgcatatgtatgtat 33075
>emb|AL929294.12| Zebrafish DNA sequence from clone CH211-66E19, complete sequence Length = 162474 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 gtggtcaatgtaccggtccg 477 |||||||||||||||||||| Sbjct: 108877 gtggtcaatgtaccggtccg 108858
>emb|AL590873.17| Mouse DNA sequence from clone RP23-217I3 on chromosome 11, complete sequence Length = 180309 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 176911 atgcatgcatatgtatgtat 176892
>gb|AC132373.4| Mus musculus BAC clone RP23-480H8 from 1, complete sequence Length = 192562 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtatctat 119 ||||||| |||||||||||||||| Sbjct: 33741 atgcatgtatatgtatgtatctat 33718
>gb|AC154219.1| Mus musculus BAC clone RP24-362C22 from 13, complete sequence Length = 175346 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 70674 atgcatgcatatgtatgtat 70655
>gb|AC149060.4| Mus musculus BAC clone RP23-242D8 from 7, complete sequence Length = 205543 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 197143 atgcatgcatatgtatgtat 197124 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 27564 atgcatgcatatgtatgtat 27545
>gb|U50191.3| Caenorhabditis elegans cosmid T14B4, complete sequence Length = 36773 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 catatggatgcatgcatatgtatg 112 |||||||||||||| ||||||||| Sbjct: 12450 catatggatgcatggatatgtatg 12473
>emb|AL732317.13| Mouse DNA sequence from clone RP23-139F8 on chromosome 2, complete sequence Length = 222471 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 catgcatatgtatgtatctatcca 122 ||||||||||||||||| |||||| Sbjct: 148117 catgcatatgtatgtatgtatcca 148094
>emb|AL691448.24| Mouse DNA sequence from clone RP23-103A1 on chromosome 11, complete sequence Length = 197959 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 26898 atgcatgcatatgtatgtat 26879
>dbj|AB014077.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region, Cosmid clone:TY7H8, complete sequence Length = 30452 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgcatgcatatgtatgtat 115 |||||||||||||||||||| Sbjct: 28153 atgcatgcatatgtatgtat 28134 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,073,473 Number of Sequences: 3902068 Number of extensions: 5073473 Number of successful extensions: 96163 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94819 Number of HSP's gapped (non-prelim): 1344 length of query: 620 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 597 effective length of database: 17,143,297,704 effective search space: 10234548729288 effective search space used: 10234548729288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
