ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags5d21 |
|---|---|
| Clone Library Name | barley_pub |
>MYO4_CAEEL (P02566) Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated| protein 54) Length = 1966 Score = 39.3 bits (90), Expect = 0.010 Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 1/101 (0%) Frame = -2 Query: 618 KVTKLKRKRQGKALPCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKEKLEFAKLKQ 439 ++ ++K+K +G + K D Q L + +E++ E+QL++ +E+ A ++ Sbjct: 1622 ELLRIKKKLEGDINELEIALDHANKANADAQKNLKRYQEQVRELQLQVEEEQRNGADTRE 1681 Query: 438 QEAK-DKKETTLYEKYSELLMADTSRFSDFQKAEYEKAVKR 319 Q +K+ T L + ELL+A+ + ++AEYE A R Sbjct: 1682 QFFNAEKRATLLQSEKEELLVANEAAERARKQAEYEAADAR 1722 Score = 36.2 bits (82), Expect = 0.085 Identities = 25/102 (24%), Positives = 49/102 (48%) Frame = -2 Query: 609 KLKRKRQGKALPCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKEKLEFAKLKQQEA 430 K KRK +G+ + E ++ DL+ L K ++ V RL E+ +KL++Q Sbjct: 1062 KQKRKVEGELKIAQENIDESGRQRHDLENNLKKKESELHSVSSRLEDEQALVSKLQRQIK 1121 Query: 429 KDKKETTLYEKYSELLMADTSRFSDFQKAEYEKAVKRMGEML 304 + + E+ E S+ +D K++ ++ ++ +GE L Sbjct: 1122 DGQSRISELEEELENERQSRSK-ADRAKSDLQRELEELGEKL 1162
>CEP2_HUMAN (Q9BV73) Centrosomal protein 2 (Centrosomal Nek2-associated protein| 1) (C-NAP1) (Centrosome protein 250) (Centrosome-associated protein CEP250) Length = 2442 Score = 38.1 bits (87), Expect = 0.022 Identities = 29/132 (21%), Positives = 58/132 (43%), Gaps = 13/132 (9%) Frame = -2 Query: 645 ESKTGAQSCKVTKLKRKRQGKALPCSSEVQEDIKRAVDLQTMLMKDREKM-SEVQLRLSK 469 E +T ++ + + + + Q ++ C +++ + +R L+T+L +E + QL + Sbjct: 893 EQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLR 952 Query: 468 EKLEFAKLKQQEAKDKKETTLYEKYSELLMADTSRFSDF------------QKAEYEKAV 325 + ++ KLK+QE +T L E EL A D K + +K V Sbjct: 953 QDMKVQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQV 1012 Query: 324 KRMGEMLFGRDD 289 + + L +DD Sbjct: 1013 EDLKSQLVAQDD 1024
>MYPT1_MOUSE (Q9DBR7) Protein phosphatase 1 regulatory subunit 12A (Myosin| phosphatase-targeting subunit 1) (Myosin phosphatase target subunit 1) Length = 1004 Score = 37.4 bits (85), Expect = 0.038 Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 4/128 (3%) Frame = -2 Query: 645 ESKTGAQSCKVTKLKRKRQGKALPCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKE 466 ES+ A+S + + +R QG L E ++ I R+ +T ++ EK E + + KE Sbjct: 677 ESQRKARSRQARQSRRSTQGVTLTDLQEAEKTIGRSRSTRTREQENEEKEKEEKEKQDKE 736 Query: 465 KLEFAK----LKQQEAKDKKETTLYEKYSELLMADTSRFSDFQKAEYEKAVKRMGEMLFG 298 K E K ++ E K K T E Y+ TS S A ++ +G L+ Sbjct: 737 KQEEKKESEASREDEYKQKYSRTYDETYTRYRPVSTSSSS----APSSSSLSTLGSTLYA 792 Query: 297 RDDR*LNR 274 LNR Sbjct: 793 SSQ--LNR 798
>MYPT1_RAT (Q10728) Protein phosphatase 1 regulatory subunit 12A (Myosin| phosphatase-targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit) (MBSP) (Serine/threonine protein phosphatase PP1 smooth muscle reg Length = 1032 Score = 36.2 bits (82), Expect = 0.085 Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 4/100 (4%) Frame = -2 Query: 645 ESKTGAQSCKVTKLKRKRQGKALPCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKE 466 ES+ A+S + + +R QG L E ++ I R+ +T ++ EK E + + KE Sbjct: 680 ESQRKARSRQARQSRRSTQGVTLTDLQEAEKTIGRSRSTRTREQENEEKDKEEKEKQDKE 739 Query: 465 KLEFAK----LKQQEAKDKKETTLYEKYSELLMADTSRFS 358 K E K ++ E K K T E Y+ TS S Sbjct: 740 KQEEKKESEVSREDEYKQKYSRTYDETYARYRPVSTSSSS 779
>MYPT1_HUMAN (O14974) Protein phosphatase 1 regulatory subunit 12A (Myosin| phosphatase-targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit) Length = 1030 Score = 35.8 bits (81), Expect = 0.11 Identities = 24/85 (28%), Positives = 44/85 (51%) Frame = -2 Query: 645 ESKTGAQSCKVTKLKRKRQGKALPCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKE 466 ES+ A+S + + +R QG L E ++ I R+ +T ++ EK E + + KE Sbjct: 679 ESQRKARSRQARQSRRSTQGVTLTDLQEAEKTIGRSRSTRTREQENEEKEKEEKEKQDKE 738 Query: 465 KLEFAKLKQQEAKDKKETTLYEKYS 391 K E +++E++ +E +KYS Sbjct: 739 KQE----EKKESETSREDEYKQKYS 759
>CAF1A_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-1 subunit A)| (Chromatin assembly factor I p150 subunit) (CAF-I 150 kDa subunit) (CAF-Ip150) Length = 938 Score = 35.4 bits (80), Expect = 0.15 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 5/100 (5%) Frame = -2 Query: 603 KRKRQGKALPCSSEVQEDIKRAVDLQT-----MLMKDREKMSEVQLRLSKEKLEFAKLKQ 439 K+ P S+ ++ K+ V T L +D+E++ + QL+L E+ E KLK+ Sbjct: 286 KQHSSTSPFPTSTPLRRITKKFVKGSTEKNKLRLQRDQERLGK-QLKLRAEREEKEKLKE 344 Query: 438 QEAKDKKETTLYEKYSELLMADTSRFSDFQKAEYEKAVKR 319 EAK KE +K E + + R +K E EKA K+ Sbjct: 345 -EAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQ 383 Score = 32.3 bits (72), Expect = 1.2 Identities = 23/99 (23%), Positives = 47/99 (47%) Frame = -2 Query: 618 KVTKLKRKRQGKALPCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKEKLEFAKLKQ 439 K KL+ +R+ K +++E+ KRA + ++ +++ E + R +EK E K ++ Sbjct: 328 KQLKLRAEREEK-----EKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEK 382 Query: 438 QEAKDKKETTLYEKYSELLMADTSRFSDFQKAEYEKAVK 322 Q K+++ E L + + + E EK +K Sbjct: 383 QRLKEERRKERQEALEAKLEEKRKKEEEKRLREEEKRIK 421
>AKAP9_HUMAN (Q99996) A-kinase anchor protein 9 (Protein kinase A-anchoring| protein 9) (PRKA9) (A-kinase anchor protein 450 kDa) (AKAP 450) (A-kinase anchor protein 350 kDa) (AKAP 350) (hgAKAP 350) (AKAP 120-like protein) (Hyperion protein) (Yotiao protei Length = 3911 Score = 35.0 bits (79), Expect = 0.19 Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Frame = -2 Query: 609 KLKRKRQGKALPCSSE-----VQEDIKRAVDLQTMLMKDREKMSEVQLRLSKEKLEFAKL 445 K+ KR+ ++ S E +Q+ + +++Q L +++ +E+Q +LS EK+ A+L Sbjct: 3109 KITLKREQESEKPSQELLEYNIQQKQSQMLEMQVELSSMKDRATELQEQLSSEKMVVAEL 3168 Query: 444 KQQEAKDKKE--TTLYEKYSELLMADTSRFSDFQKAE 340 K + A+ K E TTL ++ L + R K + Sbjct: 3169 KSELAQTKLELETTLKAQHKHLKELEAFRLEVKDKTD 3205
>RF1_HELPY (P55998) Peptide chain release factor 1 (RF-1)| Length = 352 Score = 34.7 bits (78), Expect = 0.25 Identities = 30/97 (30%), Positives = 50/97 (51%) Frame = -2 Query: 606 LKRKRQGKALPCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKEKLEFAKLKQQEAK 427 LKR + AL S+EV DIK+ T L K++ + E+ + SKE L + K Sbjct: 12 LKRYDELTALLSSAEVVSDIKKL----TELSKEQSSIEEISI-ASKEYLSVL----ENIK 62 Query: 426 DKKETTLYEKYSELLMADTSRFSDFQKAEYEKAVKRM 316 + KE ++ SEL + + + QK++ E A+K++ Sbjct: 63 ENKELLEDKELSELAKEEL-KILEIQKSDLETAIKQL 98
>RF1_HELPJ (Q9ZMZ0) Peptide chain release factor 1 (RF-1)| Length = 352 Score = 33.5 bits (75), Expect = 0.55 Identities = 31/97 (31%), Positives = 49/97 (50%) Frame = -2 Query: 606 LKRKRQGKALPCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKEKLEFAKLKQQEAK 427 LKR + AL S EV DIK+ T L K++ + E+ + SKE L + K Sbjct: 12 LKRYDELTALLSSVEVVSDIKKL----TELSKEQSSIEEISV-ASKEYLSVL----EGIK 62 Query: 426 DKKETTLYEKYSELLMADTSRFSDFQKAEYEKAVKRM 316 + KE ++ SEL + + + QK+E E A+K++ Sbjct: 63 ENKELLEDKELSELAKEEL-KILEIQKSELETAIKQL 98
>BAZ2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain 2A (Transcription| termination factor I-interacting protein 5) (TTF-I-interacting protein 5) (Tip5) (hWALp3) Length = 1878 Score = 33.1 bits (74), Expect = 0.72 Identities = 24/116 (20%), Positives = 50/116 (43%), Gaps = 2/116 (1%) Frame = -2 Query: 645 ESKTGAQSCKVTKLKRKRQGKAL--PCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLS 472 E+ K+ K K+K + K C + +Q + +T +K +E + + Sbjct: 673 ETLNEEDKAKIAKSKKKMRQKVQRGECLTTIQGQARNKRKQETKSLKHKEAKKKSKAEKE 732 Query: 471 KEKLEFAKLKQQEAKDKKETTLYEKYSELLMADTSRFSDFQKAEYEKAVKRMGEML 304 K K + KLK++ ++KKE ++ E+ A + +D A + +R + + Sbjct: 733 KGKTKQEKLKEKVKREKKEKVKMKEKEEVTKAKPACKADKTLATQRRLEERQKQQM 788
>CENPH_MOUSE (Q9QYM8) Centromere protein H (Kinetochore protein CENP-H)| (Centromere autoantigen H) Length = 241 Score = 32.7 bits (73), Expect = 0.94 Identities = 22/91 (24%), Positives = 43/91 (47%) Frame = -2 Query: 576 PCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKEKLEFAKLKQQEAKDKKETTLYEK 397 P + + +D+K + LQ ++MK +E+ SE++ +L + + +LKQ K Sbjct: 115 PENCVLTDDMKHILKLQKLIMKSQEESSELEKKLLDVRKKRLQLKQASR---------SK 165 Query: 396 YSELLMADTSRFSDFQKAEYEKAVKRMGEML 304 E+ + + D K E + +K M + L Sbjct: 166 LLEIQIEKNKQKEDVDKMENSEMIKTMKKKL 196
>PRKDC_XENLA (Q9DEI1) DNA-dependent protein kinase catalytic subunit (EC 2.7.11.1)| (DNA-PK catalytic subunit) (DNA-PKcs) Length = 4146 Score = 32.3 bits (72), Expect = 1.2 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Frame = -2 Query: 588 GKALPCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLR--LSKEKLEFAKLKQQEAKDKKE 415 G ++ ED + L+ +KDREK+S + R +++K E A +Q+ K + Sbjct: 2734 GDVTDSKTKSMEDRSDILRLRRRFLKDREKLSLIYARKGTAEQKREKAIKIEQKMKQDAQ 2793 Query: 414 TTLYEKYSE 388 TLY Y + Sbjct: 2794 ITLYRNYRQ 2802
>XMAS2_DROME (Q9U3V9) Protein xmas-2| Length = 1370 Score = 32.3 bits (72), Expect = 1.2 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 2/107 (1%) Frame = -2 Query: 618 KVTKLKRKRQGKALPCSSEVQEDIKRAV-DLQTMLMKDREKMS-EVQLRLSKEKLEFAKL 445 KV + +R RQ K E QE +R +L+ +++EK+ E + +L E+L F + Sbjct: 688 KVAEAERVRQQKL----RERQEQQRRQQQELEEQRQREQEKLQLEKERQLKLEQLFF--V 741 Query: 444 KQQEAKDKKETTLYEKYSELLMADTSRFSDFQKAEYEKAVKRMGEML 304 +QQE + K+T E Y E+ + + + +A + ML Sbjct: 742 QQQEREAHKQTRTLELYQEIFQDTLAEICQSEFMSHSRACRSYESML 788
>RLUB_VIBPA (Q87NB7) Ribosomal large subunit pseudouridine synthase B (EC| 5.4.99.-) (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) Length = 312 Score = 32.3 bits (72), Expect = 1.2 Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 5/111 (4%) Frame = -2 Query: 630 AQSCKVTKLKRKRQG-----KALPCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKE 466 +Q C V++LKR R G K LP ++ D+K L+ ++ EK E L LSK+ Sbjct: 201 SQECTVSRLKRVRYGDIFLDKKLPRGGWMELDLKEVNYLRELVELRPEK--ETMLDLSKD 258 Query: 465 KLEFAKLKQQEAKDKKETTLYEKYSELLMADTSRFSDFQKAEYEKAVKRMG 313 K++ A+ +K +++ E + R ++ + + +K G Sbjct: 259 N---TSRKRERARSQKIRRAVKRHEERVSTSKGRSNNPARRKPKKNAGEQG 306
>MAP2_RAT (P15146) Microtubule-associated protein 2 (MAP 2) (MAP-2)| Length = 1861 Score = 32.0 bits (71), Expect = 1.6 Identities = 22/64 (34%), Positives = 35/64 (54%) Frame = -2 Query: 579 LPCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKEKLEFAKLKQQEAKDKKETTLYE 400 L SSE ++ + +++ +KD K+SE ++ KEK+ L QEA DK+E+ YE Sbjct: 1085 LTLSSEAPQETDSFMGIESSHVKDGAKVSETEV---KEKVAKPDLVHQEAVDKEES--YE 1139 Query: 399 KYSE 388 E Sbjct: 1140 SSGE 1143
>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (EC 3.6.1.-)| (ATP-dependent helicase xnp-1) (X-linked nuclear protein 1) Length = 1359 Score = 31.6 bits (70), Expect = 2.1 Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 2/105 (1%) Frame = -2 Query: 618 KVTKLKRKR-QGKALPCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKEKLEFAKLK 442 K +K RKR + ++ S+ +ED K++ + + K +EK + + S E + + + Sbjct: 77 KSSKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEER 136 Query: 441 QQEAKDKKETTLYEKYSELL-MADTSRFSDFQKAEYEKAVKRMGE 310 +Q++K K + T + SE ++ R K EK+VK+ E Sbjct: 137 EQKSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKKRAE 181
>CCD39_HUMAN (Q9UFE4) Coiled-coil domain-containing protein 39| Length = 755 Score = 31.6 bits (70), Expect = 2.1 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%) Frame = -2 Query: 546 KRAVDLQTMLMKDREKMSEVQ--------LRLSKEKLEFAKLKQQE 433 K+A +LQT MK++ +SE++ L +KL+F LKQQE Sbjct: 488 KKAQELQTETMKEKAVLSEIEGTRSSLKHLNHQLQKLDFETLKQQE 533
>SYC_HUMAN (P49589) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 748 Score = 31.6 bits (70), Expect = 2.1 Identities = 20/68 (29%), Positives = 39/68 (57%) Frame = -2 Query: 549 IKRAVDLQTMLMKDREKMSEVQLRLSKEKLEFAKLKQQEAKDKKETTLYEKYSELLMADT 370 + + VD T+L K+RE+ V+ K+K E A+ ++QE + K + SE+ +++T Sbjct: 638 VVKLVDRNTLL-KEREEKRRVEEEKRKKKEEAAR-RKQEQEAAKLAKMKIPPSEMFLSET 695 Query: 369 SRFSDFQK 346 ++S F + Sbjct: 696 DKYSKFDE 703
>RAD50_AQUAE (O67124) Probable DNA double-strand break repair rad50 ATPase| Length = 978 Score = 31.2 bits (69), Expect = 2.7 Identities = 27/113 (23%), Positives = 56/113 (49%) Frame = -2 Query: 645 ESKTGAQSCKVTKLKRKRQGKALPCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKE 466 E + A + + L+ +R+ K L + + E K ++ + + D+E E +++ +E Sbjct: 677 EGELSALNESINSLEEERKEK-LKELANIYEVAKSPREVVELYLGDKEAELERKIKEFEE 735 Query: 465 KLEFAKLKQQEAKDKKETTLYEKYSELLMADTSRFSDFQKAEYEKAVKRMGEM 307 + KLK+ E ++K + YE EL +D + K + E+ K++GE+ Sbjct: 736 SFQSLKLKKSEIEEKLKE--YEGIREL--SDIKGEYESVKTQLEEKHKKLGEV 784
>TXLNB_CHICK (Q9I969) Beta-taxilin (Muscle-derived protein 77)| Length = 676 Score = 31.2 bits (69), Expect = 2.7 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 15/86 (17%) Frame = -2 Query: 519 LMKDREKMSEVQLRLSKEK-----------LEFAKLKQQEAKDKKETTLY----EKYSEL 385 L + +E M E + R KEK L+ LK+QE + + TLY E++ + Sbjct: 312 LEQSQEMMKEAEERHQKEKEYLLNQAAEWKLQAKMLKEQETVLQAQITLYSERFEEFQKT 371 Query: 384 LMADTSRFSDFQKAEYEKAVKRMGEM 307 L F+ F K E EK K+M ++ Sbjct: 372 LTKSNEVFATF-KQEMEKMTKKMKKL 396
>SURF6_XENLA (Q9I8B0) Surfeit locus protein 6 homolog| Length = 341 Score = 30.8 bits (68), Expect = 3.6 Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 11/93 (11%) Frame = -2 Query: 642 SKTGAQSCKVTKLKRKRQGKALPCSSEVQ--------EDIKRAVD---LQTMLMKDREKM 496 S+ A+ CK+ +L+ K +GKA S+++ E +K D L+ L + +K Sbjct: 221 SRLEARKCKLEELRAKDEGKAKEFESKIKWTNVLYKAEGVKIKDDEGMLKAALKRKEKKQ 280 Query: 495 SEVQLRLSKEKLEFAKLKQQEAKDKKETTLYEK 397 + + R K + E + Q+ +DK+ + +K Sbjct: 281 KQREKRWDK-RTELTADRMQQRQDKRRRNIMKK 312
>M5_STRP5 (P02977) M protein, serotype 5 precursor| Length = 492 Score = 30.8 bits (68), Expect = 3.6 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 7/110 (6%) Frame = -2 Query: 618 KVTKLKRKRQGKALPCSSEVQEDIKRAVDLQTMLMKDREKMS----EVQLRLSKEKLEFA 451 K+++ RK + L S E ++ +++A++ + EK++ E + KEK E Sbjct: 328 KISEASRKGLRRDLDASREAKKQVEKALEEANSKLAALEKLNKELEESKKLTEKEKAELQ 387 Query: 450 KLKQQEAKDKKETTLYEKYSELLMADTSRFSDFQKAEYE---KAVKRMGE 310 + EAK KE L ++ EL + SD Q + + KAV G+ Sbjct: 388 AKLEAEAKALKE-QLAKQAEELAKLRAGKASDSQTPDTKPGNKAVPGKGQ 436
>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)| Length = 1391 Score = 30.8 bits (68), Expect = 3.6 Identities = 26/117 (22%), Positives = 50/117 (42%), Gaps = 5/117 (4%) Frame = -2 Query: 645 ESKTGAQSCKVTKLKRKRQGKALPCSS----EVQEDIKRAVDLQTMLMKDREKMSEVQLR 478 + K + CK K K + + C++ + +ED K+A K+ ++ + + Sbjct: 327 KEKALKKKCKDLGRKMKEEAEKKKCAALAKKQKEEDEKKACKELAKKKKEADEKKKCEEA 386 Query: 477 LSKEKLEFAKLK-QQEAKDKKETTLYEKYSELLMADTSRFSDFQKAEYEKAVKRMGE 310 +KEK K K ++ AK++KE +K E + + E K +K+ E Sbjct: 387 ANKEKKAAEKKKCEKAAKERKEAAEKKKCEEAAKKEKEAAERKKCEELAKNIKKAAE 443
>BAZ2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain 2A| (Transcription termination factor I-interacting protein 5) (TTF-I-interacting protein 5) (Tip5) Length = 1850 Score = 30.8 bits (68), Expect = 3.6 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%) Frame = -2 Query: 618 KVTKLKRKRQGKALPCSSEV----QEDIKRAVDLQTMLMKDREKMSEVQLRLSKEKLEFA 451 K+TK K+K + K S+ Q KR D +++ KD +K + + K K E Sbjct: 662 KMTKNKKKMRQKVQRGESQTPVQGQARNKRKQDTKSLKQKDTKKKLKAEKEKMKTKQE-- 719 Query: 450 KLKQQEAKDKKE 415 KLK++ ++KKE Sbjct: 720 KLKEKVKREKKE 731
>YAFA_SCHPO (Q09863) Hypothetical protein C29E6.10c in chromosome I| Length = 1085 Score = 30.4 bits (67), Expect = 4.7 Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 18/116 (15%) Frame = -2 Query: 609 KLKRKRQGKALPCSSEVQEDIKRAVDLQTMLMKDREKMSEV--QLRLSKE----KLEFAK 448 K+ ++RQ K L E++E+ KR + + ++++EK + QL+L+KE + E + Sbjct: 563 KVAQQRQAKLL---EEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREAER 619 Query: 447 L------------KQQEAKDKKETTLYEKYSELLMADTSRFSDFQKAEYEKAVKRM 316 L +Q+EA+ K+E ++ E + R +K + ++ K++ Sbjct: 620 LAEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKL 675
>NANE_LACJO (Q74HT0) Putative N-acetylmannosamine-6-phosphate 2-epimerase (EC| 5.1.3.9) (ManNAc-6-P epimerase) Length = 230 Score = 30.4 bits (67), Expect = 4.7 Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 1/114 (0%) Frame = -2 Query: 636 TGAQSCKVTKLKRKRQGKALPCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKEKLE 457 TG ++ V +K+ ++ LP ++ D T MK+ +++ E + + Sbjct: 47 TGLRANSVRDIKQIKKIVDLPMIGIIKRDYPPEKPYITPTMKEVDELVETGVEVIAIDAT 106 Query: 456 FAKLKQQEAKDKKETTLYEKY-SELLMADTSRFSDFQKAEYEKAVKRMGEMLFG 298 + ++ + KY ++LLMADTS F + + A YE V +G L G Sbjct: 107 LRPRHDGKTVNEFIKEIKTKYPNQLLMADTSNFEEAKNA-YEAGVDFVGTTLSG 159
>IF2_IDILO (Q5QTY8) Translation initiation factor IF-2| Length = 896 Score = 30.4 bits (67), Expect = 4.7 Identities = 27/104 (25%), Positives = 50/104 (48%) Frame = -2 Query: 633 GAQSCKVTKLKRKRQGKALPCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKEKLEF 454 G S + +K+ KR+ K+ ++ V+++ + SE Q R +E+L Sbjct: 55 GGGSSEPSKMTLKRKTKSTLSVGGGRDSKSVQVEVRKKRTYVKRSASEEQEREEQERLAQ 114 Query: 453 AKLKQQEAKDKKETTLYEKYSELLMADTSRFSDFQKAEYEKAVK 322 K + +EAK ++E E+ + A+ ++ +KAE EKA K Sbjct: 115 EK-EAEEAKLREEEKQREEEQQRKEAEAKAKAEREKAEKEKAEK 157
>INO80_NEUCR (Q872I5) Putative DNA helicase ino-80 (EC 3.6.1.-)| Length = 2001 Score = 30.4 bits (67), Expect = 4.7 Identities = 19/79 (24%), Positives = 37/79 (46%) Frame = -2 Query: 570 SSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKEKLEFAKLKQQEAKDKKETTLYEKYS 391 S+E +E I++A+D E E +LRL +E+ E+ + + + ++ Y+ Sbjct: 575 SAENEEKIRKAMDRIETRELPHEDEFEEELRLWRERREYKRQQMNQRDLRQRRQRRADYT 634 Query: 390 ELLMADTSRFSDFQKAEYE 334 E+ +DF K Y+ Sbjct: 635 EVEAQKLKLHADFGKRRYD 653
>CCD43_CHICK (Q5ZK95) Coiled-coil domain-containing protein 43| Length = 217 Score = 30.4 bits (67), Expect = 4.7 Identities = 18/53 (33%), Positives = 32/53 (60%) Frame = -2 Query: 555 EDIKRAVDLQTMLMKDREKMSEVQLRLSKEKLEFAKLKQQEAKDKKETTLYEK 397 ED+ A L+ L++D + + Q +L +EK + AK +++E K+KK T E+ Sbjct: 164 EDVLNARKLERELLRDEFQKKKEQDKLQREKDKLAKQERKE-KEKKRTQKGER 215
>ITSN1_XENLA (O42287) Intersectin-1| Length = 1270 Score = 30.0 bits (66), Expect = 6.1 Identities = 19/77 (24%), Positives = 38/77 (49%) Frame = -2 Query: 627 QSCKVTKLKRKRQGKALPCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKEKLEFAK 448 Q + K+K+K + +++E+ KR + Q L +DR K E + + E+ E + Sbjct: 621 QDFETEKIKQKELERKTSELDKLKEEDKRRMLEQDKLWQDRVKQEEERYKFQDEEKEKRE 680 Query: 447 LKQQEAKDKKETTLYEK 397 Q+ + +K+ + EK Sbjct: 681 ESVQKCEVEKKPEIQEK 697
>U2AFL_HUMAN (Q15695) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit-related protein 1 (U2(RNU2) small nuclear RNA auxillary factor 1-like 1) Length = 479 Score = 30.0 bits (66), Expect = 6.1 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 19/120 (15%) Frame = -2 Query: 618 KVTKLKRKRQGKA----LPCSSEVQEDI---KRAVDLQTMLMKDREKMSE---------- 490 K K K++RQ A S E +ED ++ ++ + +L ++RE++ E Sbjct: 29 KKEKRKKRRQELARLRDSGLSQEEEEDTFIEEQQLEEEKLLERERERLHEEWLLREQKAQ 88 Query: 489 VQLRLSKEKLEFAK--LKQQEAKDKKETTLYEKYSELLMADTSRFSDFQKAEYEKAVKRM 316 + R+ KEK E AK L++QE K K++ K + + +K E E+AV++M Sbjct: 89 EEFRIKKEKEEAAKKWLEEQERKLKEQW----KEQQRKEREEEEQKQQEKKEKEEAVQKM 144
>MYO2_SACKL (Q875Q8) Myosin-2 (Class V unconventional myosin MYO2) (Type V myosin| heavy chain MYO2) (Myosin V MYO2) Length = 1554 Score = 30.0 bits (66), Expect = 6.1 Identities = 20/77 (25%), Positives = 40/77 (51%) Frame = -2 Query: 570 SSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKEKLEFAKLKQQEAKDKKETTLYEKYS 391 S+ ++E + D + +++ ++ +VQ +EKL AK + +EAK++ E L K Sbjct: 971 SANIKELLNSQKDEHSKVLQQQKDAHDVQFNEVQEKLVNAKKEVEEAKEEIE-QLIAKQD 1029 Query: 390 ELLMADTSRFSDFQKAE 340 EL ++ + KA+ Sbjct: 1030 ELKAEVRTKIEELNKAK 1046
>Y80K_PARPR (O00844) Hypothetical 80 kDa protein| Length = 682 Score = 30.0 bits (66), Expect = 6.1 Identities = 15/52 (28%), Positives = 27/52 (51%) Frame = -2 Query: 528 QTMLMKDREKMSEVQLRLSKEKLEFAKLKQQEAKDKKETTLYEKYSELLMAD 373 Q+++ D + + LRL+ ++Q+ +KK LYE Y EL +A+ Sbjct: 496 QSLIHGDLKNKRDDTLRLTMSSKSLLGIRQKYNTEKKFNKLYEAYEELALAE 547
>YGH5_YEAST (P53159) Hypothetical 44.6 kDa protein in RPL7A-HSF1 intergenic| region Length = 387 Score = 30.0 bits (66), Expect = 6.1 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 2/90 (2%) Frame = -2 Query: 606 LKRKRQGKALPCSSEVQ-EDIKRAVDLQTMLMKDREK-MSEVQLRLSKEKLEFAKLKQQE 433 L R GKAL EVQ E++KR + + L+++ E+ +SE+++RL + ++A ++Q Sbjct: 154 LSRNNIGKAL----EVQVEELKRELTAKQSLLQENERQVSELKIRLETYQEKYASIQQ-- 207 Query: 432 AKDKKETTLYEKYSELLMADTSRFSDFQKA 343 RFSD QKA Sbjct: 208 ----------------------RFSDLQKA 215
>ABCF1_MOUSE (Q6P542) ATP-binding cassette sub-family F member 1| Length = 837 Score = 30.0 bits (66), Expect = 6.1 Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 15/119 (12%) Frame = -2 Query: 645 ESKTGAQSCKVTKLKRKRQGKALPCSS-----EVQEDIKRAVDLQTMLMKDREKMSEVQL 481 E G +S K + K K + K+ P ++ E +ED + + KDR+K E + Sbjct: 166 EEPPGLRSKKGKEEKSKGKAKSKPAAADSEGEEEEEDTAKEKE-PPQQGKDRDK-KEAEQ 223 Query: 480 RLSKEKLE----------FAKLKQQEAKDKKETTLYEKYSELLMADTSRFSDFQKAEYE 334 +EK E +A L ++E K K+ YE+ E L A + +DF ++ E Sbjct: 224 GSGEEKEEKEGDLKANDPYANLSKKEKKKLKKQMDYERQVESLKAANAAENDFSVSQAE 282
>LA_DROME (P40796) La protein homolog (La ribonucleoprotein) (La autoantigen| homolog) Length = 390 Score = 29.6 bits (65), Expect = 8.0 Identities = 15/50 (30%), Positives = 29/50 (58%) Frame = -2 Query: 564 EVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKEKLEFAKLKQQEAKDKKE 415 E ++ K ++ + ++ K+RE + + Q+ KEK E K ++ K+KKE Sbjct: 202 ETKDQAKAFLEQEKIVYKERELLRKWQVDYLKEKQEEYAQKNEKRKNKKE 251
>INVS_BRARE (Q8UVC1) Inversin| Length = 1021 Score = 29.6 bits (65), Expect = 8.0 Identities = 20/71 (28%), Positives = 35/71 (49%) Frame = -2 Query: 525 TMLMKDREKMSEVQLRLSKEKLEFAKLKQQEAKDKKETTLYEKYSELLMADTSRFSDFQK 346 T + + +EK E + K+K + +Q ++K++ T E+ E LM T + + Sbjct: 799 TSVTRQKEKRQEKETHREKDKRSRTEGDKQTVREKQKGTGIERAKERLMGRTRK----KL 854 Query: 345 AEYEKAVKRMG 313 AE EK K+ G Sbjct: 855 AEKEKEKKKDG 865
>M24_STRPY (P12379) M protein, serotype 24 precursor| Length = 539 Score = 29.6 bits (65), Expect = 8.0 Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 7/110 (6%) Frame = -2 Query: 618 KVTKLKRKRQGKALPCSSEVQEDIKRAVDLQTMLMKDREKMS----EVQLRLSKEKLEFA 451 K+++ R+ + L S E ++ +++A++ + EK++ E + KEK E Sbjct: 375 KISEASRQSLRRDLDASREAKKQVEKALEEANSKLAALEKLNKELEESKKLTEKEKAELQ 434 Query: 450 KLKQQEAKDKKETTLYEKYSELLMADTSRFSDFQKAEYE---KAVKRMGE 310 + EAK KE L ++ EL + SD Q + + KAV G+ Sbjct: 435 AKLEAEAKALKE-KLAKQAEELAKLRAGKASDSQTPDAKPGNKAVPGKGQ 483
>ATR_ASHGO (Q75DB8) Serine/threonine-protein kinase MEC1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1) (ATR homolog) Length = 2324 Score = 29.6 bits (65), Expect = 8.0 Identities = 25/88 (28%), Positives = 41/88 (46%) Frame = -3 Query: 269 LVGYIKRFC*SANLSMLLYLLIWPARRLSNTTCTVYLSSALVRSSSCLDFK*PTLQVLKL 90 +VG +K FC S NL+ + L + C L +L+ ++ PT ++LKL Sbjct: 1401 VVGVLKVFC-SNNLTSRIEELQYSDNWKMAQDCFDALGDSLLNEQGGVENSVPTSRMLKL 1459 Query: 89 EGEHNLMADGLKLNFGSIKL*VPKGRRQ 6 +H L LK ++L +P +RQ Sbjct: 1460 MYDHQLYDQTLK----KLELNIPSKKRQ 1483
>OPTN_BRARE (Q5RI56) Optineurin| Length = 517 Score = 29.6 bits (65), Expect = 8.0 Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 12/91 (13%) Frame = -2 Query: 555 EDIKRAVDLQTMLMKDREKMSEVQ--LRLSKEKLEFA-KLKQQEAKDKKE---------T 412 +D+++ + + D++K+ L++ E L+ A KL+Q++ +D+K T Sbjct: 276 KDLEQDLGTLKTQLGDKQKVQAENDCLKVQMESLQAAIKLEQKKTQDEKNNLNQLKDAYT 335 Query: 411 TLYEKYSELLMADTSRFSDFQKAEYEKAVKR 319 L+E YSEL R S K +Y++ R Sbjct: 336 KLFEDYSELQEEKKKRESCVSKDDYDELQTR 366
>UBR1_CAEEL (P91133) Ubiquitin-protein ligase E3 component N-recognin (EC| 6.-.-.-) (Ubiquitin-protein ligase E3-alpha) Length = 1927 Score = 29.6 bits (65), Expect = 8.0 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 2/90 (2%) Frame = -2 Query: 576 PCSSEVQEDIKRAVDLQTMLMKDREKMSEVQLRLSKEKLEFAKLKQQEAKDKKETTLYEK 397 P SE + KRA M K KMS +Q + K K++ +E KD+ +T EK Sbjct: 1039 PAQSEEEIKAKRAARAAEMRQKAMAKMSNMQSKFMK------KIEDEEKKDESQTP-SEK 1091 Query: 396 YSELLMADTSRFSDFQKAEY--EKAVKRMG 313 ++ D D+ + E VK++G Sbjct: 1092 SETVVKKD-----DYDNKHFFDEDVVKQVG 1116
>SYCP3_BOVIN (Q3T0E2) Synaptonemal complex protein 3 (SCP-3)| Length = 225 Score = 29.6 bits (65), Expect = 8.0 Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 5/96 (5%) Frame = -2 Query: 603 KRKRQGKALPCSSEVQEDIKR-AVDLQTMLMKDREKM---SEVQLRLSKEKLEFAKLKQQ 436 K++ EVQ ++R D+ L+ R+++ ++ L+ S +KLE QQ Sbjct: 55 KKRTSAAVEDMGGEVQNMLERFGADINKSLLAKRKRLEMYTKASLKTSNQKLENVWKIQQ 114 Query: 435 EAKDKKETTLYEKYSELLMADTSRFS-DFQKAEYEK 331 E + K L ++YS+ + ++ D QKAE ++ Sbjct: 115 EQRQK----LNQEYSQQFLTLFQQWDIDMQKAEEQE 146 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,510,150 Number of Sequences: 219361 Number of extensions: 1444880 Number of successful extensions: 4604 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 4396 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4574 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
