>STAG2_MOUSE (O35638) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)|
          Length = 1231

 Score = 32.3 bits (72), Expect = 0.85
 Identities = 22/62 (35%), Positives = 33/62 (53%)
 Frame = -3

Query: 525 RAEKPELLTVILPQSLKKQPPESQELLSKVQNLIEKPQYDHLPLIEASRLCNMDIISKVQ 346
           R    EL  V LPQ L K   +++    KV NL++ PQY  L +    RL N D+ + ++
Sbjct: 560 RTRITELFAVALPQLLAKYSVDAE----KVTNLLQLPQYFDLEIYTTGRLEN-DLDALLR 614

Query: 345 QV 340
           Q+
Sbjct: 615 QI 616

>STAG2_HUMAN (Q8N3U4) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)|
          Length = 1231

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = -3

Query: 525 RAEKPELLTVILPQSLKKQPPESQELLSKVQNLIEKPQYDHLPLIEASRL 376
           R +  EL  V LPQ L K   +++    KV NL++ PQY  L +    RL
Sbjct: 560 RTKITELFAVALPQLLAKYSVDAE----KVTNLLQLPQYFDLEIYTTGRL 605

>STAG2_XENLA (Q9DGN0) Cohesin subunit SA-2 (xSA-2) (Stromal antigen 2 homolog)|
           (SCC3 homolog 2)
          Length = 1194

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = -3

Query: 510 ELLTVILPQSLKKQPPESQELLSKVQNLIEKPQYDHLPLIEASRL 376
           EL  V LPQ L K   +++    KV NL++ PQY  L +    RL
Sbjct: 496 ELFAVSLPQLLAKYSVDAE----KVTNLLQLPQYFDLEIYTTGRL 536

>EX7S_METCA (Q60AM9) Probable exodeoxyribonuclease VII small subunit (EC|
           3.1.11.6) (Exonuclease VII small subunit)
          Length = 76

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 11/35 (31%), Positives = 25/35 (71%)
 Frame = -3

Query: 480 LKKQPPESQELLSKVQNLIEKPQYDHLPLIEASRL 376
           + ++PP  +E L++++ L+E+ +  +LPL E+ +L
Sbjct: 1   MARKPPSFEEALTELEQLVERMEQGNLPLEESLKL 35

>CTPE_MYCTU (P0A504) Probable cation-transporting ATPase E (EC 3.6.3.-)|
          Length = 797

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -2

Query: 262 ALLLGLASTSGRFYPLFVRRPVNGML-FGLVIPVYT 158
           A +L LA  + R YP FVRR +   + FGLVI V T
Sbjct: 647 AFILSLAPNNERAYPGFVRRVMTSAVPFGLVIGVAT 682

>CTPE_MYCBO (P0A505) Probable cation-transporting ATPase E (EC 3.6.3.-)|
          Length = 797

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -2

Query: 262 ALLLGLASTSGRFYPLFVRRPVNGML-FGLVIPVYT 158
           A +L LA  + R YP FVRR +   + FGLVI V T
Sbjct: 647 AFILSLAPNNERAYPGFVRRVMTSAVPFGLVIGVAT 682

>T3JAM_MOUSE (Q8C0G2) TRAF3-interacting JNK-activating modulator|
           (TRAF3-interacting protein 3)
          Length = 513

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 18/43 (41%), Positives = 20/43 (46%)
 Frame = -3

Query: 492 LPQSLKKQPPESQELLSKVQNLIEKPQYDHLPLIEASRLCNMD 364
           L   LKK   E Q L+SKVQ L    Q   L L E  +L   D
Sbjct: 396 LQDQLKKSEEEKQALVSKVQQLQSLLQNQSLQLQEQEKLLKKD 438

>TRPM7_HUMAN (Q96QT4) Transient receptor potential cation channel subfamily M|
           member 7 (EC 2.7.11.1) (Long transient receptor
           potential channel 7) (LTrpC7) (Channel-kinase 1)
          Length = 1865

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
 Frame = -3

Query: 507 LLTVILPQSLKKQPPESQELLSKVQNLIEKPQYDHLPLIEASRL---CNMDIISKVQQVI 337
           +LTV+  + L++ PP    +        +   Y H    E   L      DIIS +++  
Sbjct: 297 ILTVL--EYLQESPPVPVVVCEGTGRAADLLAYIHKQTEEGGNLPDAAEPDIISTIKKTF 354

Query: 336 CFAFHDSRLLMETCQEAKNMRKIVTLFYL 250
            F  +++  L +T  E    ++++T+F++
Sbjct: 355 NFGQNEALHLFQTLMECMKRKELITVFHI 383


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,914,852
Number of Sequences: 219361
Number of extensions: 1448464
Number of successful extensions: 3584
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3583
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4142954952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)