| Clone Name | rbags5d19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | gb|AF464763.1| Candida dubliniensis hypothetical protein gene, c... | 42 | 0.73 | 2 | emb|AL161644.6| Human DNA sequence from clone RP5-997D24 on chro... | 40 | 2.9 | 3 | emb|AL928859.13| Mouse DNA sequence from clone RP23-479N10 on ch... | 40 | 2.9 |
|---|
>gb|AF464763.1| Candida dubliniensis hypothetical protein gene, complete cds; and hypothetical protein YOL57 gene, partial cds Length = 6737 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 ctccaaaaacaatccaaacagcagc 125 |||||| |||||||||||||||||| Sbjct: 3330 ctccaataacaatccaaacagcagc 3306
>emb|AL161644.6| Human DNA sequence from clone RP5-997D24 on chromosome 1 Contains the 3' end of the MRPL37 gene for mitochondrial ribosomal protein L37, two novel genes, the 3' end of the SSBP3 gene for single stranded DNA binding protein 3, a novel protein (MSTP128) and a CpG island, complete sequence Length = 83463 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 tgatgaatacagcaaccacc 209 |||||||||||||||||||| Sbjct: 79063 tgatgaatacagcaaccacc 79082
>emb|AL928859.13| Mouse DNA sequence from clone RP23-479N10 on chromosome 2, complete sequence Length = 135750 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 agctggtaggctgatgaatacagc 202 |||||||||||||||||| ||||| Sbjct: 41389 agctggtaggctgatgaacacagc 41412 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,717,684 Number of Sequences: 3902068 Number of extensions: 1717684 Number of successful extensions: 127797 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 127793 Number of HSP's gapped (non-prelim): 4 length of query: 227 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 205 effective length of database: 17,147,199,772 effective search space: 3515175953260 effective search space used: 3515175953260 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)