| Clone Name | rbags5d18 |
|---|---|
| Clone Library Name | barley_pub |
>RP8L3_ARATH (Q9FJB5) Probable disease resistance RPP8-like protein 3| Length = 901 Score = 39.7 bits (91), Expect = 0.005 Identities = 20/71 (28%), Positives = 43/71 (60%), Gaps = 3/71 (4%) Frame = -1 Query: 430 DGALPCXEGLYVVSLSKLDKVPQGIESLSSLKKLWLVGLHGGFKTQWDKNGMQQ---KMV 260 +G++PC L + S KL+++P G++ ++SLK+L + G+ K +W + + + K+ Sbjct: 830 EGSMPCLRDLIIHSCEKLEELPDGLKYVTSLKELKIEGM----KREWKEKLVGEDYYKVQ 885 Query: 259 HVQEVRV*NSE 227 H+ +V+ N + Sbjct: 886 HIPDVQFFNCD 896
>DRL13_ARATH (Q9XIF0) Putative disease resistance protein At1g59780| Length = 906 Score = 37.4 bits (85), Expect = 0.022 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Frame = -1 Query: 430 DGALPCXEGLYVVSLSKLDKVPQGIESLSSLKKLWLVGLHGGFKTQWDKNGMQ-QKMVHV 254 +G++P L++V KL ++P G+ +SSLK+L + F+ + K G KM HV Sbjct: 822 EGSMPLLHTLHIVDCKKLKEIPDGLRFISSLKELAIRTNEKVFQKKVSKGGEDYYKMQHV 881 Query: 253 QEVR 242 +R Sbjct: 882 PLIR 885
>RPP8_ARATH (Q8W4J9) Disease resistance protein RPP8 (Resistance to Peronospora| parasitica protein 8) Length = 908 Score = 37.0 bits (84), Expect = 0.029 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Frame = -1 Query: 430 DGALPCXEGLYVVSLSKLDKVPQGIESLSSLKKLWLVGLHGGFKTQWDKNGMQ-QKMVHV 254 +G++PC L + KL ++P G++ ++SLK+L + G+ +K + G K+ H+ Sbjct: 839 EGSMPCLRTLTIDDCKKLKELPDGLKYITSLKELKIEGMKREWKEKLVPGGEDYYKVQHI 898 Query: 253 QEVRV*NSE 227 +V+ N + Sbjct: 899 PDVQFINCD 907
>RP8HA_ARATH (P59584) Disease resistance protein RPH8A (RPP8 homolog A)| Length = 910 Score = 37.0 bits (84), Expect = 0.029 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Frame = -1 Query: 430 DGALPCXEGLYVVSLSKLDKVPQGIESLSSLKKLWLVGLHGGFKTQWDKNGMQ-QKMVHV 254 +G++PC L + KL ++P G++ ++SLK+L + G+ +K + G K+ H+ Sbjct: 841 EGSMPCLRTLTIHDCEKLKELPDGLKYITSLKELKIEGMKREWKEKLVPGGEDYYKVQHI 900 Query: 253 QEVRV*NSE 227 +V+ N + Sbjct: 901 PDVQFINCD 909
>RP8L4_ARATH (Q9FJK8) Probable disease resistance RPP8-like protein 4| Length = 908 Score = 33.5 bits (75), Expect = 0.32 Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Frame = -1 Query: 430 DGALPCXEGLYVVSLSKLDKVPQGIESLSSLKKLWLVGLHGGFKTQWDKNGMQ-QKMVHV 254 +G++PC L + KL ++P G++ ++SLK+L + + +K + G K+ H+ Sbjct: 839 EGSMPCLRTLTIHDCEKLKELPDGLKYITSLKELKIREMKREWKEKLVPGGEDYYKVQHI 898 Query: 253 QEVRV*NSE 227 +V+ N + Sbjct: 899 PDVQFINCD 907
>RPM1_ARATH (Q39214) Disease resistance protein RPM1 (Resistance to Pseudomonas| syringae protein 3) Length = 926 Score = 32.7 bits (73), Expect = 0.55 Identities = 20/58 (34%), Positives = 33/58 (56%) Frame = -1 Query: 493 FXHXKSXTXKXMHNVNXXKIIDGALPCXEGLYVVSLSKLDKVPQGIESLSSLKKLWLV 320 F + K M ++ I DGA+ + LYV + L+ VP+GIE+L +L++L L+ Sbjct: 825 FQNLKILEIVQMKHLTEVVIEDGAMFELQKLYVRACRGLEYVPRGIENLINLQELHLI 882
>RP8L2_ARATH (Q9MAG6) Probable disease resistance RPP8-like protein 2| Length = 1271 Score = 30.4 bits (67), Expect = 2.7 Identities = 11/37 (29%), Positives = 25/37 (67%) Frame = -1 Query: 439 KIIDGALPCXEGLYVVSLSKLDKVPQGIESLSSLKKL 329 ++ +G++PC L + + KL ++P G++ ++ LK+L Sbjct: 834 RVEEGSMPCLRTLTIDNCKKLKQLPDGLKYVTCLKEL 870
>ROBO4_HUMAN (Q8WZ75) Roundabout homolog 4 precursor (Magic roundabout)| Length = 1007 Score = 30.0 bits (66), Expect = 3.6 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Frame = +1 Query: 229 QSFRHEPP--EHAPSSAAFRSCPTEF*SPHASPPTRASSGS*GIQCLEGPYPASTTTQHT 402 QS + +PP APSS + P SP + P +ASS L GP PAS+ + Sbjct: 728 QSQQTQPPVAPQAPSSILLPAAPIPILSPCSPPSPQASS-------LSGPSPASSRLSSS 780 Query: 403 NL 408 +L Sbjct: 781 SL 782
>REPS2_MOUSE (Q80XA6) RalBP1-associated Eps domain-containing protein 2| (RalBP1-interacting protein 2) (Partner of RalBP1) Length = 521 Score = 29.3 bits (64), Expect = 6.1 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +1 Query: 241 HEPPEHAPSSAAFRSCPTEF*SPHASPPTR 330 H APS AA S PT+ +PHA PP++ Sbjct: 397 HSQLNRAPSQAA-ESSPTKMDAPHAQPPSK 425 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,415,454 Number of Sequences: 219361 Number of extensions: 1406451 Number of successful extensions: 3503 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3411 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3503 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3523384522 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)