Clone Name	rbags5d15
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_469817.1| Oryza sativa (japonica cultivar-group), mRNA	305	8e-80
2	dbj|AK099399.1| Oryza sativa (japonica cultivar-group) cDNA clon...	305	8e-80
3	gb|AY104090.1| Zea mays PCO128580 mRNA sequence	293	3e-76
4	ref|XM_469818.1| Oryza sativa (japonica cultivar-group), mRNA	100	9e-18
5	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	100	9e-18
6	gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genom...	100	9e-18
7	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	100	9e-18
8	gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence	96	1e-16
9	emb|X64114.1|BNACCP05 B.napus ACP05 gene for acyl carrier protein	54	5e-04
10	gb|S84968.1| Bcg4-4=acyl carrier protein [Brassica rapa, Genomic...	52	0.002
11	ref|NM_111373.2| Arabidopsis thaliana unknown protein AT3G05010 ...	50	0.008
12	gb|AY046040.1| Arabidopsis thaliana unknown protein (At3g05010) ...	50	0.008
13	emb|BX822218.1|CNS0A5TG Arabidopsis thaliana Full-length cDNA Co...	50	0.008
14	emb|AL591146.21| Mouse DNA sequence from clone RP23-252E4 on chr...	46	0.12
15	ref|NM_122603.1| Arabidopsis thaliana unknown protein AT5G27210 ...	44	0.48
16	emb|CR855374.5| Zebrafish DNA sequence from clone CH211-9M16 in ...	44	0.48
17	gb|AY039860.1| Arabidopsis thaliana AT5g27210/T21B4_120 mRNA, co...	44	0.48
18	gb|AY088841.1| Arabidopsis thaliana clone 96808 mRNA, complete s...	44	0.48
19	emb|AL844887.10| Zebrafish DNA sequence from clone DKEY-66C10, c...	44	0.48
20	gb|AF007271.1|TM021B04 Arabidopsis thaliana BAC TM021B04	44	0.48
21	emb|CR391966.8| Zebrafish DNA sequence from clone CH211-269M15 i...	42	1.9
22	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.9
23	dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic D...	42	1.9
24	dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic D...	42	1.9
25	gb|AC153642.7| Mus musculus 6 BAC RP23-334E23 (Roswell Park Canc...	42	1.9
26	gb|AC153640.6| Mus musculus 6 BAC RP23-230A2 (Roswell Park Cance...	42	1.9
27	gb|AC125012.12| Mus musculus chromosome 7, clone RP24-143K11, co...	40	7.5
28	gb|AC163222.4| Mus musculus chromosome 7, clone RP24-157O12, com...	40	7.5
29	emb|CR352226.16| Zebrafish DNA sequence from clone CH211-209L18 ...	40	7.5
30	gb|AC106461.6| Rattus norvegicus 1 BAC CH230-208N10 (Children's ...	40	7.5
31	emb|AL450346.4| Human DNA sequence from clone RP11-184C23 on chr...	40	7.5
32	emb|BX936324.6| Zebrafish DNA sequence from clone CH211-74F16 in...	40	7.5
33	emb|CR847548.8| Zebrafish DNA sequence from clone DKEY-185L9 in ...	40	7.5
34	emb|CR354422.7| Zebrafish DNA sequence from clone CH211-129O4 in...	40	7.5
35	dbj|BS000654.1| Pan troglodytes chromosome Y clone:PTB-129E12, c...	40	7.5
36	gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence	40	7.5
37	gb|AC079336.5| Homo sapiens chromosome 17, clone RP11-466A19, co...	40	7.5
38	gb|AC136451.9| Medicago truncatula clone mth2-17d19, complete se...	40	7.5
39	gb|AC172374.4| Pan troglodytes BAC clone CH251-119H6 from chromo...	40	7.5
40	gb|AC150909.3| Pan troglodytes BAC clone CH251-1056O7 from chrom...	40	7.5
41	gb|AC156805.2| Pan troglodytes BAC clone CH251-830G14 from chrom...	40	7.5
42	gb|AC092959.6| Homo sapiens 3 BAC RP11-649A16 (Roswell Park Canc...	40	7.5
43	gb|AF490843.1| Homo sapiens clone PAC 70L19, HOXC gene cluster	40	7.5
44	gb|AC012531.11|AC012531 Homo sapiens, clone RP11-83K1, complete ...	40	7.5
45	gb|AC002119.2| Homo sapiens chromosome 17, clone CTC-347H5, comp...	40	7.5
46	emb|BX085195.5| Zebrafish DNA sequence from clone DKEY-226A5 in ...	40	7.5
47	dbj|AB025617.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	40	7.5
48	emb|BX088722.8| Zebrafish DNA sequence from clone CH211-253P18 i...	40	7.5
49	gb|AF064516.1|AF064516 Tetrahymena thermophila Rad51 (RAD51) gen...	40	7.5
50	emb|AL845490.8| Mouse DNA sequence from clone RP23-259M16 on chr...	40	7.5

---

>ref|XM_469817.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 930

 Score =  305 bits (154), Expect = 8e-80
 Identities = 295/342 (86%)
 Strand = Plus / Minus

                                                                       
Query: 205 aatcccagtcagcatcaaagaacccggcatctttcatctccgagtagtatacgttctcca 264
           ||||||||||||||||||||||||| || ||||||||||| |||||||| |||||||| |
Sbjct: 928 aatcccagtcagcatcaaagaacccagcgtctttcatctctgagtagtagacgttctcta 869

                                                                       
Query: 265 gaagcatgtcttcctcctggaagaagtctgctaagaaagtcacatatagaagtggaaggt 324
           | ||||| |||||||||||||| |||||||||| |||||||||||| |||||||||||||
Sbjct: 868 ggagcatatcttcctcctggaaaaagtctgctaggaaagtcacatagagaagtggaaggt 809

                                                                       
Query: 325 aaagagcatggtaacagacagtagtgaggttgtaaagccatagaccaaatccagctccac 384
           |||||| ||| ||||| ||| | ||||| ||||| | ||||| |||||||||||||||| 
Sbjct: 808 aaagagaatgataacatacactggtgagattgtacaaccataaaccaaatccagctccag 749

                                                                       
Query: 385 atgtaacgaggaaacagccaaacagcgataagccgttaagtgccagcattgcacacacat 444
            || ||| |||||||| |||||||| |||| ||| || |||   | ||| ||||| ||||
Sbjct: 748 ttgcaacaaggaaacatccaaacagtgatatgccattcagtagtaacatcgcacagacat 689

                                                                       
Query: 445 actggtaatatgccggttttgcaggtagcctgtctttccaccttgagtgatgcatgaaaa 504
           | |  |||||||| ||||||||||||| ||||||| ||||||||||||||| |||||| |
Sbjct: 688 agttataatatgctggttttgcaggtaacctgtctctccaccttgagtgatacatgaaca 629

                                                     
Query: 505 caatcaaaccatagactcctgtaagcaccaatttgtggagaa 546
           ||||||  |||||||| || ||||||||||||||||| ||||
Sbjct: 628 caatcaggccatagacaccagtaagcaccaatttgtgtagaa 587

---

>dbj|AK099399.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O17, full
            insert sequence
          Length = 1344

 Score =  305 bits (154), Expect = 8e-80
 Identities = 295/342 (86%)
 Strand = Plus / Minus

                                                                        
Query: 205  aatcccagtcagcatcaaagaacccggcatctttcatctccgagtagtatacgttctcca 264
            ||||||||||||||||||||||||| || ||||||||||| |||||||| |||||||| |
Sbjct: 1061 aatcccagtcagcatcaaagaacccagcgtctttcatctctgagtagtagacgttctcta 1002

                                                                        
Query: 265  gaagcatgtcttcctcctggaagaagtctgctaagaaagtcacatatagaagtggaaggt 324
            | ||||| |||||||||||||| |||||||||| |||||||||||| |||||||||||||
Sbjct: 1001 ggagcatatcttcctcctggaaaaagtctgctaggaaagtcacatagagaagtggaaggt 942

                                                                        
Query: 325  aaagagcatggtaacagacagtagtgaggttgtaaagccatagaccaaatccagctccac 384
            |||||| ||| ||||| ||| | ||||| ||||| | ||||| |||||||||||||||| 
Sbjct: 941  aaagagaatgataacatacactggtgagattgtacaaccataaaccaaatccagctccag 882

                                                                        
Query: 385  atgtaacgaggaaacagccaaacagcgataagccgttaagtgccagcattgcacacacat 444
             || ||| |||||||| |||||||| |||| ||| || |||   | ||| ||||| ||||
Sbjct: 881  ttgcaacaaggaaacatccaaacagtgatatgccattcagtagtaacatcgcacagacat 822

                                                                        
Query: 445  actggtaatatgccggttttgcaggtagcctgtctttccaccttgagtgatgcatgaaaa 504
            | |  |||||||| ||||||||||||| ||||||| ||||||||||||||| |||||| |
Sbjct: 821  agttataatatgctggttttgcaggtaacctgtctctccaccttgagtgatacatgaaca 762

                                                      
Query: 505  caatcaaaccatagactcctgtaagcaccaatttgtggagaa 546
            ||||||  |||||||| || ||||||||||||||||| ||||
Sbjct: 761  caatcaggccatagacaccagtaagcaccaatttgtgtagaa 720

---

>gb|AY104090.1| Zea mays PCO128580 mRNA sequence
          Length = 703

 Score =  293 bits (148), Expect = 3e-76
 Identities = 301/352 (85%)
 Strand = Plus / Minus

                                                                       
Query: 198 acggtttaatcccagtcagcatcaaagaacccggcatctttcatctccgagtagtatacg 257
           |||| |||||||||||||||||| |||||||| ||||| ||||| || || ||||| |||
Sbjct: 498 acggattaatcccagtcagcatcgaagaacccagcatccttcatttcagaatagtagacg 439

                                                                       
Query: 258 ttctccagaagcatgtcttcctcctggaagaagtctgctaagaaagtcacatatagaagt 317
           ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 438 ttctctaggagcatgtcttcctcctggaagaagtctgctaagaaagtcacatataggagg 379

                                                                       
Query: 318 ggaaggtaaagagcatggtaacagacagtagtgaggttgtaaagccatagaccaaatcca 377
           ||||||||||||| ||| || || || || ||||| || || | ||||| ||||||||||
Sbjct: 378 ggaaggtaaagagaatgatagcatacggttgtgagattatataaccataaaccaaatcca 319

                                                                       
Query: 378 gctccacatgtaacgaggaaacagccaaacagcgataagccgttaagtgccagcattgca 437
           ||||||| || ||  |||||||| |||||||| |||| ||| || |||  || |||  ||
Sbjct: 318 gctccacttgcaataaggaaacatccaaacagtgatatgccattcagtagcaacatcaca 259

                                                                       
Query: 438 cacacatactggtaatatgccggttttgcaggtagcctgtctttccaccttgagtgatgc 497
           || ||||| | ||| ||||| ||||||||||| ||||||||| |||| ||||| ||||||
Sbjct: 258 catacatagttgtagtatgctggttttgcaggcagcctgtctctccatcttgaatgatgc 199

                                                               
Query: 498 atgaaaacaatcaaaccatagactcctgtaagcaccaatttgtggagaatcc 549
           |||||||||||||  ||||||||||| |||||||| | ||||||||||||||
Sbjct: 198 atgaaaacaatcagcccatagactccagtaagcacaagtttgtggagaatcc 147

---

>ref|XM_469818.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1948

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 71/78 (91%)
 Strand = Plus / Minus

                                                                        
Query: 205  aatcccagtcagcatcaaagaacccggcatctttcatctccgagtagtatacgttctcca 264
            ||||||||||||||||||||||||| || ||||||||||| |||||||| |||||||| |
Sbjct: 1941 aatcccagtcagcatcaaagaacccagcgtctttcatctctgagtagtagacgttctcta 1882

                              
Query: 265  gaagcatgtcttcctcct 282
            | ||||| ||||||||||
Sbjct: 1881 ggagcatatcttcctcct 1864



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                        
Query: 466  caggtagcctgtctttccaccttgagtgatgcatgaaaacaatcaaaccatagactcctg 525
            |||||| ||||||| ||||||||||||||| |||||| |||||||  |||||||| || |
Sbjct: 1367 caggtaacctgtctctccaccttgagtgatacatgaacacaatcaggccatagacaccag 1308

                                 
Query: 526  taagcaccaatttgtggagaa 546
            |||||||||||||||| ||||
Sbjct: 1307 taagcaccaatttgtgtagaa 1287



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                        
Query: 280  cctggaagaagtctgctaagaaagtcacatatagaagtggaaggtaaagagcatggtaac 339
            ||||||| |||||||||| |||||||||||| ||||||||||||||||||| ||| ||||
Sbjct: 1729 cctggaaaaagtctgctaggaaagtcacatagagaagtggaaggtaaagagaatgataac 1670

                               
Query: 340  agacagtagtgaggttgta 358
            | ||| | ||||| |||||
Sbjct: 1669 atacactggtgagattgta 1651



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 362  ccatagaccaaatccagctccacatgtaacgaggaaacagccaaacagcgata 414
            ||||| ||||||||||||||||  || ||| |||||||| |||||||| ||||
Sbjct: 1561 ccataaaccaaatccagctccagttgcaacaaggaaacatccaaacagtgata 1509

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                            
Query: 205      aatcccagtcagcatcaaagaacccggcatctttcatctccgagtagtatacgttctcca 264
                ||||||||||||||||||||||||| || ||||||||||| |||||||| |||||||| |
Sbjct: 30917059 aatcccagtcagcatcaaagaacccagcgtctttcatctctgagtagtagacgttctcta 30917118

                                  
Query: 265      gaagcatgtcttcctcct 282
                | ||||| ||||||||||
Sbjct: 30917119 ggagcatatcttcctcct 30917136



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                            
Query: 466      caggtagcctgtctttccaccttgagtgatgcatgaaaacaatcaaaccatagactcctg 525
                |||||| ||||||| ||||||||||||||| |||||| |||||||  |||||||| || |
Sbjct: 30917633 caggtaacctgtctctccaccttgagtgatacatgaacacaatcaggccatagacaccag 30917692

                                     
Query: 526      taagcaccaatttgtggagaa 546
                |||||||||||||||| ||||
Sbjct: 30917693 taagcaccaatttgtgtagaa 30917713



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                            
Query: 280      cctggaagaagtctgctaagaaagtcacatatagaagtggaaggtaaagagcatggtaac 339
                ||||||| |||||||||| |||||||||||| ||||||||||||||||||| ||| ||||
Sbjct: 30917271 cctggaaaaagtctgctaggaaagtcacatagagaagtggaaggtaaagagaatgataac 30917330

                                   
Query: 340      agacagtagtgaggttgta 358
                | ||| | ||||| |||||
Sbjct: 30917331 atacactggtgagattgta 30917349



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                     
Query: 362      ccatagaccaaatccagctccacatgtaacgaggaaacagccaaacagcgata 414
                ||||| ||||||||||||||||  || ||| |||||||| |||||||| ||||
Sbjct: 30917439 ccataaaccaaatccagctccagttgcaacaaggaaacatccaaacagtgata 30917491

---

>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete
             sequence
          Length = 122496

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 71/78 (91%)
 Strand = Plus / Minus

                                                                         
Query: 205   aatcccagtcagcatcaaagaacccggcatctttcatctccgagtagtatacgttctcca 264
             ||||||||||||||||||||||||| || ||||||||||| |||||||| |||||||| |
Sbjct: 26031 aatcccagtcagcatcaaagaacccagcgtctttcatctctgagtagtagacgttctcta 25972

                               
Query: 265   gaagcatgtcttcctcct 282
             | ||||| ||||||||||
Sbjct: 25971 ggagcatatcttcctcct 25954



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                         
Query: 466   caggtagcctgtctttccaccttgagtgatgcatgaaaacaatcaaaccatagactcctg 525
             |||||| ||||||| ||||||||||||||| |||||| |||||||  |||||||| || |
Sbjct: 25457 caggtaacctgtctctccaccttgagtgatacatgaacacaatcaggccatagacaccag 25398

                                  
Query: 526   taagcaccaatttgtggagaa 546
             |||||||||||||||| ||||
Sbjct: 25397 taagcaccaatttgtgtagaa 25377



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                         
Query: 280   cctggaagaagtctgctaagaaagtcacatatagaagtggaaggtaaagagcatggtaac 339
             ||||||| |||||||||| |||||||||||| ||||||||||||||||||| ||| ||||
Sbjct: 25819 cctggaaaaagtctgctaggaaagtcacatagagaagtggaaggtaaagagaatgataac 25760

                                
Query: 340   agacagtagtgaggttgta 358
             | ||| | ||||| |||||
Sbjct: 25759 atacactggtgagattgta 25741



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 362   ccatagaccaaatccagctccacatgtaacgaggaaacagccaaacagcgata 414
             ||||| ||||||||||||||||  || ||| |||||||| |||||||| ||||
Sbjct: 25651 ccataaaccaaatccagctccagttgcaacaaggaaacatccaaacagtgata 25599

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                            
Query: 205      aatcccagtcagcatcaaagaacccggcatctttcatctccgagtagtatacgttctcca 264
                ||||||||||||||||||||||||| || ||||||||||| |||||||| |||||||| |
Sbjct: 31007582 aatcccagtcagcatcaaagaacccagcgtctttcatctctgagtagtagacgttctcta 31007641

                                  
Query: 265      gaagcatgtcttcctcct 282
                | ||||| ||||||||||
Sbjct: 31007642 ggagcatatcttcctcct 31007659



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                            
Query: 466      caggtagcctgtctttccaccttgagtgatgcatgaaaacaatcaaaccatagactcctg 525
                |||||| ||||||| ||||||||||||||| |||||| |||||||  |||||||| || |
Sbjct: 31008156 caggtaacctgtctctccaccttgagtgatacatgaacacaatcaggccatagacaccag 31008215

                                     
Query: 526      taagcaccaatttgtggagaa 546
                |||||||||||||||| ||||
Sbjct: 31008216 taagcaccaatttgtgtagaa 31008236



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                            
Query: 280      cctggaagaagtctgctaagaaagtcacatatagaagtggaaggtaaagagcatggtaac 339
                ||||||| |||||||||| |||||||||||| ||||||||||||||||||| ||| ||||
Sbjct: 31007794 cctggaaaaagtctgctaggaaagtcacatagagaagtggaaggtaaagagaatgataac 31007853

                                   
Query: 340      agacagtagtgaggttgta 358
                | ||| | ||||| |||||
Sbjct: 31007854 atacactggtgagattgta 31007872



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                     
Query: 362      ccatagaccaaatccagctccacatgtaacgaggaaacagccaaacagcgata 414
                ||||| ||||||||||||||||  || ||| |||||||| |||||||| ||||
Sbjct: 31007962 ccataaaccaaatccagctccagttgcaacaaggaaacatccaaacagtgata 31008014

---

>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence
          Length = 142376

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                         
Query: 466   caggtagcctgtctttccaccttgagtgatgcatgaaaacaatcaaaccatagactcctg 525
             |||| ||||||||| |||| ||||| |||||||||||||||||||  ||||||||||| |
Sbjct: 85623 caggcagcctgtctctccatcttgaatgatgcatgaaaacaatcaggccatagactccag 85682

                                     
Query: 526   taagcaccaatttgtggagaatcc 549
             ||||||| | ||||||||||||||
Sbjct: 85683 taagcacaagtttgtggagaatcc 85706



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                                
Query: 280   cctggaagaagtctgctaagaaagtcacatatagaagtggaaggtaaagag 330
             |||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 85269 cctggaagaagtctgctaagaaagtcacatataggaggggaaggtaaagag 85319



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                         
Query: 205   aatcccagtcagcatcaaagaacccggcatctttcatctccgagtagtatacgttctcca 264
             |||||||||| |||||||||||||| ||||| ||||| || || ||||| |||||||| |
Sbjct: 85100 aatcccagtccgcatcaaagaacccagcatccttcatttcagaatagtagacgttctcta 85159

                               
Query: 265   gaagcatgtcttcctcct 282
             | ||||||||||||||||
Sbjct: 85160 ggagcatgtcttcctcct 85177



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 362   ccatagaccaaatccagctccacatgtaacgaggaaacagccaaacagcgata 414
             ||||| ||||||||||||||||| || || ||||||||| |||||||| ||||
Sbjct: 85436 ccataaaccaaatccagctccacttgcaatgaggaaacatccaaacagtgata 85488

---

>emb|X64114.1|BNACCP05 B.napus ACP05 gene for acyl carrier protein
          Length = 2227

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                        
Query: 202  tttaatcccagtcagcatcaaagaacccggcatctttcatctccgagtagtatacgttct 261
            |||| ||||| ||||| |||||||| || |||||||||||||| || ||||| || ||||
Sbjct: 2139 tttattcccaatcagcgtcaaagaatccagcatctttcatctctgaatagtagacattct 2198

               
Query: 262  cca 264
            |||
Sbjct: 2199 cca 2201

---

>gb|S84968.1| Bcg4-4=acyl carrier protein [Brassica rapa, Genomic, 3898 nt]
          Length = 3898

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                      
Query: 207  tcccagtcagcatcaaagaacccggcatctttcatctccgagtagtatacgttctcca 264
            ||||| ||||| |||||||| || |||||||||||||| || ||||| || |||||||
Sbjct: 2669 tcccaatcagcgtcaaagaatccagcatctttcatctctgaatagtagacattctcca 2726



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 280  cctggaagaagtctgctaagaaagtcacatatagaagtggaag 322
            |||||||||||||||| | |||||| ||||| ||||| |||||
Sbjct: 2866 cctggaagaagtctgcaaggaaagtaacatagagaagaggaag 2908

---

>ref|NM_111373.2| Arabidopsis thaliana unknown protein AT3G05010 mRNA, complete cds
          Length = 1270

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                        
Query: 207  tcccagtcagcatcaaagaacccggcatctttcatctccgagtagtatacgttctccaga 266
            ||||| ||||| || ||||| || ||||||||||| || || ||||| || ||||||| |
Sbjct: 1053 tcccaatcagcgtcgaagaatccagcatctttcatttctgaatagtagacattctccaaa 994

                                         
Query: 267  agcatgtcttcctcctggaagaagtctgc 295
              ||  |||||||||||||| ||||||||
Sbjct: 993  ttcagatcttcctcctggaaaaagtctgc 965

---

>gb|AY046040.1| Arabidopsis thaliana unknown protein (At3g05010) mRNA, complete cds
          Length = 1275

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                        
Query: 207  tcccagtcagcatcaaagaacccggcatctttcatctccgagtagtatacgttctccaga 266
            ||||| ||||| || ||||| || ||||||||||| || || ||||| || ||||||| |
Sbjct: 1053 tcccaatcagcgtcgaagaatccagcatctttcatttctgaatagtagacattctccaaa 994

                                         
Query: 267  agcatgtcttcctcctggaagaagtctgc 295
              ||  |||||||||||||| ||||||||
Sbjct: 993  ttcagatcttcctcctggaaaaagtctgc 965

---

>emb|BX822218.1|CNS0A5TG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB20ZC04 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1222

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                        
Query: 207  tcccagtcagcatcaaagaacccggcatctttcatctccgagtagtatacgttctccaga 266
            ||||| ||||| || ||||| || ||||||||||| || || ||||| || ||||||| |
Sbjct: 1019 tcccaatcagcgtcgaagaatccagcatctttcatttctgaatagtagacattctccaaa 960

                                         
Query: 267  agcatgtcttcctcctggaagaagtctgc 295
              ||  |||||||||||||| ||||||||
Sbjct: 959  ttcagatcttcctcctggaaaaagtctgc 931

---

>emb|AL591146.21| Mouse DNA sequence from clone RP23-252E4 on chromosome 11 Contains the 3'
              end of the Myo1d gene for myosin ID, two novel genes, the
              Cdk5r gene for cyclin-dependent kinase 5 regulatory subunit
              (p35), the Psmd11 gene for non-ATPase proteasome (prosome,
              macropain) 26S subunit 11, the Zfp207 gene for zinc finger
              protein 207 and the 3' end of the Rhbdl4 gene for rhomboid
              veinlet-like 4 (Drosophila), complete sequence
          Length = 195208

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 496    gcatgaaaacaatcaaaccatagactc 522
              |||||||||||||||||||| ||||||
Sbjct: 167524 gcatgaaaacaatcaaaccaaagactc 167550

---

>ref|NM_122603.1| Arabidopsis thaliana unknown protein AT5G27210 mRNA, complete cds
          Length = 1187

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 231 gcatctttcatctccgagtagtatacgttctcca 264
           ||||| |||||||| ||||||||||| |||||||
Sbjct: 926 gcatccttcatctctgagtagtatacattctcca 893

---

>emb|CR855374.5| Zebrafish DNA sequence from clone CH211-9M16 in linkage group 16,
            complete sequence
          Length = 78429

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 336  taacagacagtagtgaggttgtaaag 361
            |||||||||||||||| |||||||||
Sbjct: 5546 taacagacagtagtgatgttgtaaag 5571

---

>gb|AY039860.1| Arabidopsis thaliana AT5g27210/T21B4_120 mRNA, complete cds
          Length = 1167

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 231 gcatctttcatctccgagtagtatacgttctcca 264
           ||||| |||||||| ||||||||||| |||||||
Sbjct: 910 gcatccttcatctctgagtagtatacattctcca 877

---

>gb|AY088841.1| Arabidopsis thaliana clone 96808 mRNA, complete sequence
          Length = 1188

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 231 gcatctttcatctccgagtagtatacgttctcca 264
           ||||| |||||||| ||||||||||| |||||||
Sbjct: 926 gcatccttcatctctgagtagtatacattctcca 893

---

>emb|AL844887.10| Zebrafish DNA sequence from clone DKEY-66C10, complete sequence
          Length = 243870

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 336    taacagacagtagtgaggttgtaaag 361
              |||||||||||||||| |||||||||
Sbjct: 125284 taacagacagtagtgatgttgtaaag 125309

---

>gb|AF007271.1|TM021B04 Arabidopsis thaliana BAC TM021B04
          Length = 90019

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 231   gcatctttcatctccgagtagtatacgttctcca 264
             ||||| |||||||| ||||||||||| |||||||
Sbjct: 49914 gcatccttcatctctgagtagtatacattctcca 49881

---

>emb|CR391966.8| Zebrafish DNA sequence from clone CH211-269M15 in linkage group 8,
            complete sequence
          Length = 105854

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 50   gtgtattgataaatttacacatttt 74
            |||||||||||||| ||||||||||
Sbjct: 9710 gtgtattgataaatatacacatttt 9686

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 37       acaaataaagtgtgtgtattg 57
                |||||||||||||||||||||
Sbjct: 17173237 acaaataaagtgtgtgtattg 17173217

---

>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0091C18
          Length = 154416

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 37    acaaataaagtgtgtgtattg 57
             |||||||||||||||||||||
Sbjct: 97092 acaaataaagtgtgtgtattg 97072

---

>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1770_H03
          Length = 189893

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 37    acaaataaagtgtgtgtattg 57
             |||||||||||||||||||||
Sbjct: 33862 acaaataaagtgtgtgtattg 33842

---

>gb|AC153642.7| Mus musculus 6 BAC RP23-334E23 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 227781

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 312   agaagtggaaggtaaagagca 332
             |||||||||||||||||||||
Sbjct: 19645 agaagtggaaggtaaagagca 19665

---

>gb|AC153640.6| Mus musculus 6 BAC RP23-230A2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 208897

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 312    agaagtggaaggtaaagagca 332
              |||||||||||||||||||||
Sbjct: 195508 agaagtggaaggtaaagagca 195528

---

>gb|AC125012.12| Mus musculus chromosome 7, clone RP24-143K11, complete sequence
          Length = 141809

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 423   agtgccagcattgcacacacatac 446
             ||||||||||||||| ||||||||
Sbjct: 53788 agtgccagcattgcagacacatac 53765

---

>gb|AC163222.4| Mus musculus chromosome 7, clone RP24-157O12, complete sequence
          Length = 180557

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 423    agtgccagcattgcacacacatac 446
              ||||||||||||||| ||||||||
Sbjct: 136019 agtgccagcattgcagacacatac 135996

---

>emb|CR352226.16| Zebrafish DNA sequence from clone CH211-209L18 in linkage group 22,
             complete sequence
          Length = 209197

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 489   gagtgatgcatgaaaacaat 508
             ||||||||||||||||||||
Sbjct: 69210 gagtgatgcatgaaaacaat 69229

---

>gb|AC106461.6| Rattus norvegicus 1 BAC CH230-208N10 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 212829

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 63     tttacacattttcattgattataa 86
              ||||||||| ||||||||||||||
Sbjct: 118237 tttacacatcttcattgattataa 118214

---

>emb|AL450346.4| Human DNA sequence from clone RP11-184C23 on chromosome 6 Contains the
             gene for a novel protein similar to FK506-binding protein
             (FKBP-12) (Peptidyl-prolyl cis-trans isomerase)(PPiase)
             (Rotamase), a pseudogene similar to part of serine
             palmitoyltransferase long chain base subunit 1(SPTLC1) and
             a novel pseudogene, complete sequence
          Length = 168467

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 78    tgattataatggttgttgcttgtt 101
             |||||||||||||| |||||||||
Sbjct: 74717 tgattataatggtttttgcttgtt 74740

---

>emb|BX936324.6| Zebrafish DNA sequence from clone CH211-74F16 in linkage group 3,
              complete sequence
          Length = 154312

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 489    gagtgatgcatgaaaacaatcaaa 512
              |||||||||||||||| |||||||
Sbjct: 139278 gagtgatgcatgaaaaaaatcaaa 139301

---

>emb|CR847548.8| Zebrafish DNA sequence from clone DKEY-185L9 in linkage group 8,
            complete sequence
          Length = 249728

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 486  cttgagtgatgcatgaaaac 505
            ||||||||||||||||||||
Sbjct: 5397 cttgagtgatgcatgaaaac 5416

---

>emb|CR354422.7| Zebrafish DNA sequence from clone CH211-129O4 in linkage group 20,
              complete sequence
          Length = 177570

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 60     aaatttacacattttcattgatta 83
              ||||||||||||||| ||||||||
Sbjct: 163102 aaatttacacattttaattgatta 163125

---

>dbj|BS000654.1| Pan troglodytes chromosome Y clone:PTB-129E12, complete sequences
          Length = 193714

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    gtggaatggaatcagacggt 202
              ||||||||||||||||||||
Sbjct: 172306 gtggaatggaatcagacggt 172287

---

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 183     gtggaatggaatcagacggt 202
               ||||||||||||||||||||
Sbjct: 6017055 gtggaatggaatcagacggt 6017036

---

>gb|AC079336.5| Homo sapiens chromosome 17, clone RP11-466A19, complete sequence
          Length = 168851

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 496   gcatgaaaacaatcaaacca 515
             ||||||||||||||||||||
Sbjct: 95147 gcatgaaaacaatcaaacca 95166

---

>gb|AC136451.9| Medicago truncatula clone mth2-17d19, complete sequence
          Length = 132473

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 171   aagtcatacagcgtggaatggaatcaga 198
             ||||||||||  ||||||||||||||||
Sbjct: 67125 aagtcatacatggtggaatggaatcaga 67098

---

>gb|AC172374.4| Pan troglodytes BAC clone CH251-119H6 from chromosome y, complete
             sequence
          Length = 176115

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   gtggaatggaatcagacggt 202
             ||||||||||||||||||||
Sbjct: 50721 gtggaatggaatcagacggt 50702

---

>gb|AC150909.3| Pan troglodytes BAC clone CH251-1056O7 from chromosome y, complete
              sequence
          Length = 178039

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    gtggaatggaatcagacggt 202
              ||||||||||||||||||||
Sbjct: 177762 gtggaatggaatcagacggt 177743

---

>gb|AC156805.2| Pan troglodytes BAC clone CH251-830G14 from chromosome y, complete
             sequence
          Length = 230623

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   gtggaatggaatcagacggt 202
             ||||||||||||||||||||
Sbjct: 91891 gtggaatggaatcagacggt 91910

---

>gb|AC092959.6| Homo sapiens 3 BAC RP11-649A16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 179714

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    cattttcattgattataatg 88
             ||||||||||||||||||||
Sbjct: 89636 cattttcattgattataatg 89655

---

>gb|AF490843.1| Homo sapiens clone PAC 70L19, HOXC gene cluster
          Length = 152740

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    aaataaagtgtgtgtattga 58
             ||||||||||||||||||||
Sbjct: 59314 aaataaagtgtgtgtattga 59295

---

>gb|AC012531.11|AC012531 Homo sapiens, clone RP11-83K1, complete sequence
          Length = 171949

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     aaataaagtgtgtgtattga 58
              ||||||||||||||||||||
Sbjct: 119122 aaataaagtgtgtgtattga 119103

---

>gb|AC002119.2| Homo sapiens chromosome 17, clone CTC-347H5, complete sequence
          Length = 107977

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 496   gcatgaaaacaatcaaacca 515
             ||||||||||||||||||||
Sbjct: 73571 gcatgaaaacaatcaaacca 73552

---

>emb|BX085195.5| Zebrafish DNA sequence from clone DKEY-226A5 in linkage group 3,
             complete sequence
          Length = 227111

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 489   gagtgatgcatgaaaacaatcaaa 512
             |||||||||||||||| |||||||
Sbjct: 73807 gagtgatgcatgaaaaaaatcaaa 73784

---

>dbj|AB025617.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K7B16
          Length = 26721

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    gtattgataaatttacacat 71
             ||||||||||||||||||||
Sbjct: 10613 gtattgataaatttacacat 10632

---

>emb|BX088722.8| Zebrafish DNA sequence from clone CH211-253P18 in linkage group 20,
              complete sequence
          Length = 195359

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 60     aaatttacacattttcattgatta 83
              ||||||||||||||| ||||||||
Sbjct: 179357 aaatttacacattttaattgatta 179380

---

>gb|AF064516.1|AF064516 Tetrahymena thermophila Rad51 (RAD51) gene, complete cds
          Length = 4630

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 59   taaatttacacattttcatt 78
            ||||||||||||||||||||
Sbjct: 3480 taaatttacacattttcatt 3499

---

>emb|AL845490.8| Mouse DNA sequence from clone RP23-259M16 on chromosome 2, complete
             sequence
          Length = 200794

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   tgtaacgaggaaacagccaa 405
             ||||||||||||||||||||
Sbjct: 50640 tgtaacgaggaaacagccaa 50659


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,737,844
Number of Sequences: 3902068
Number of extensions: 5737844
Number of successful extensions: 97598
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 97257
Number of HSP's gapped (non-prelim): 339
length of query: 550
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 527
effective length of database: 17,143,297,704
effective search space: 9034517890008
effective search space used: 9034517890008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---