ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags5d13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_467534.1| Oryza sativa (japonica cultivar-group), mRNA 347 3e-92
2dbj|AK066163.1| Oryza sativa (japonica cultivar-group) cDNA clon... 347 3e-92
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
4dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
5gb|AY109863.1| Zea mays CL6963_1 mRNA sequence 165 2e-37
6gb|AC149277.11| Mus musculus BAC clone RP24-213J23 from chromoso... 42 2.0
7gb|AC099007.2| Drosophila melanogaster clone BACR16B07, complete... 40 8.0
8gb|AC132412.2| Mus musculus BAC clone RP23-355N5 from chromosome... 40 8.0
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.0
10gb|AC122453.4| Mus musculus BAC clone RP24-258A18 from chromosom... 40 8.0
11gb|AC158340.9| Mus musculus chromosome 1, clone RP24-161N8, comp... 40 8.0
12emb|AL731653.1| Human DNA sequence from clone RP11-33D13 on chro... 40 8.0
13emb|AL121757.7|HSDJ828H9 Human DNA sequence from clone RP5-828H9... 40 8.0
14emb|AL050403.16|HSDJ697P8 Human DNA sequence from clone RP4-697P... 40 8.0
15emb|Y19210.1|HSDNAHB5 Homo sapiens KRTHB5 gene for type II hair ... 40 8.0
16gb|AC104008.4| Homo sapiens chromosome 8, clone RP11-192I2, comp... 40 8.0
17gb|AC016825.12| Homo sapiens chromosome 10 clone RP11-498B4, com... 40 8.0
18gb|AC007184.4| Arabidopsis thaliana chromosome 2 clone T11P11 ma... 40 8.0
19gb|AC093881.2| Homo sapiens BAC clone RP11-655B23 from 4, comple... 40 8.0
20dbj|AK148759.1| Mus musculus 2 days neonate sympathetic ganglion... 40 8.0
21dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
22gb|AC078865.22| Homo sapiens 12 BAC RP3-416H24 (Roswell Park Can... 40 8.0
23gb|AC104244.9| Homo sapiens chromosome 8, clone RP11-1038G5, com... 40 8.0
24gb|AC137076.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 8.0
25gb|AC146595.2| Mus musculus BAC clone RP24-164G18 from chromosom... 40 8.0
26emb|AJ000238.1|HVJ000238 Hordeum vulgare mRNA for expressed sequ... 40 8.0
27gb|AE003452.5| Drosophila melanogaster chromosome 2R, section 60... 40 8.0
28dbj|AP001120.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 8.0
29gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome 40 8.0
30gb|AC128664.3| Mus musculus BAC clone RP24-328H10 from 6, comple... 40 8.0
31gb|AC004313.1|AC004313 Drosophila melanogaster (P1 DS02368 (D205... 40 8.0
32gb|AC135863.4| Mus musculus BAC clone RP23-453H18 from 1, comple... 40 8.0

>ref|XM_467534.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1437

 Score =  347 bits (175), Expect = 3e-92
 Identities = 334/387 (86%)
 Strand = Plus / Minus

                                                                        
Query: 202  ccattccagttctaactccatctcacctgattctacgttctgcagctttaggttcacttc 261
            |||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||
Sbjct: 1210 ccattccagttctaactccatctcacctgattctacattctgcaactttaggtgcacttc 1151

                                                                        
Query: 262  ctgttttacctttcccgacgaaatattgacaatgctgtcgctcaacaggcaattgtctct 321
            |||||||||||| ||||||  || ||||||| |||| ||  ||| ||||  ||||||| |
Sbjct: 1150 ctgttttaccttgcccgacacaacattgacagtgctatctttcaccagggcattgtcttt 1091

                                                                        
Query: 322  ggtcatgaaccaccttccaatttgcatgtctgcgtgacgcgacgggtctccgaaggccat 381
            ||||||||||||||||||||||||||||||  |   |||||| || ||||| ||||||||
Sbjct: 1090 ggtcatgaaccaccttccaatttgcatgtcaccaacacgcgagggatctccaaaggccat 1031

                                                                        
Query: 382  ggcagctgtgatcattggcttcagatctatctctgcttcccccatgatatcgtcagcaga 441
            | | |||||||||||||| |  ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 1030 gacggctgtgatcattggttgaagatctatctccgcttcccccatgatatcatcagcaga 971

                                                                        
Query: 442  gaaagtgtcgtgatcatacacttcaagttttaaaggtccataatttcgaggaactgatag 501
            ||| || || || || || ||||||||||| | |||||||||||||||||||| ||||| 
Sbjct: 970  gaacgtatcatggtcgtatacttcaagtttaagaggtccataatttcgaggaattgatat 911

                                                                        
Query: 502  agtaagaacctcattccataccgggttcaggtcactcgctttaactgttgtttgagcctt 561
              |||| |||||||||||||| ||||||| |||||||| |||||| || |||||||| ||
Sbjct: 910  cttaagcacctcattccatactgggttcaagtcactcggtttaacagtggtttgagcttt 851

                                       
Query: 562  ctgctctccaagacttaaaacaacata 588
            |||||| |||||  ||| |||||||||
Sbjct: 850  ctgctccccaagtgttagaacaacata 824



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>dbj|AK066163.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051C01, full
            insert sequence
          Length = 1438

 Score =  347 bits (175), Expect = 3e-92
 Identities = 334/387 (86%)
 Strand = Plus / Minus

                                                                        
Query: 202  ccattccagttctaactccatctcacctgattctacgttctgcagctttaggttcacttc 261
            |||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||
Sbjct: 1210 ccattccagttctaactccatctcacctgattctacattctgcaactttaggtgcacttc 1151

                                                                        
Query: 262  ctgttttacctttcccgacgaaatattgacaatgctgtcgctcaacaggcaattgtctct 321
            |||||||||||| ||||||  || ||||||| |||| ||  ||| ||||  ||||||| |
Sbjct: 1150 ctgttttaccttgcccgacacaacattgacagtgctatctttcaccagggcattgtcttt 1091

                                                                        
Query: 322  ggtcatgaaccaccttccaatttgcatgtctgcgtgacgcgacgggtctccgaaggccat 381
            ||||||||||||||||||||||||||||||  |   |||||| || ||||| ||||||||
Sbjct: 1090 ggtcatgaaccaccttccaatttgcatgtcaccaacacgcgagggatctccaaaggccat 1031

                                                                        
Query: 382  ggcagctgtgatcattggcttcagatctatctctgcttcccccatgatatcgtcagcaga 441
            | | |||||||||||||| |  ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 1030 gacggctgtgatcattggttgaagatctatctccgcttcccccatgatatcatcagcaga 971

                                                                        
Query: 442  gaaagtgtcgtgatcatacacttcaagttttaaaggtccataatttcgaggaactgatag 501
            ||| || || || || || ||||||||||| | |||||||||||||||||||| ||||| 
Sbjct: 970  gaacgtatcatggtcgtatacttcaagtttaagaggtccataatttcgaggaattgatat 911

                                                                        
Query: 502  agtaagaacctcattccataccgggttcaggtcactcgctttaactgttgtttgagcctt 561
              |||| |||||||||||||| ||||||| |||||||| |||||| || |||||||| ||
Sbjct: 910  cttaagcacctcattccatactgggttcaagtcactcggtttaacagtggtttgagcttt 851

                                       
Query: 562  ctgctctccaagacttaaaacaacata 588
            |||||| |||||  ||| |||||||||
Sbjct: 850  ctgctccccaagtgttagaacaacata 824



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  244 bits (123), Expect = 3e-61
 Identities = 213/243 (87%)
 Strand = Plus / Plus

                                                                            
Query: 202      ccattccagttctaactccatctcacctgattctacgttctgcagctttaggttcacttc 261
                |||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||
Sbjct: 30017046 ccattccagttctaactccatctcacctgattctacattctgcaactttaggtgcacttc 30017105

                                                                            
Query: 262      ctgttttacctttcccgacgaaatattgacaatgctgtcgctcaacaggcaattgtctct 321
                |||||||||||| ||||||  || ||||||| |||| ||  ||| ||||  ||||||| |
Sbjct: 30017106 ctgttttaccttgcccgacacaacattgacagtgctatctttcaccagggcattgtcttt 30017165

                                                                            
Query: 322      ggtcatgaaccaccttccaatttgcatgtctgcgtgacgcgacgggtctccgaaggccat 381
                ||||||||||||||||||||||||||||||  |   |||||| || ||||| ||||||||
Sbjct: 30017166 ggtcatgaaccaccttccaatttgcatgtcaccaacacgcgagggatctccaaaggccat 30017225

                                                                            
Query: 382      ggcagctgtgatcattggcttcagatctatctctgcttcccccatgatatcgtcagcaga 441
                | | |||||||||||||| |  ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 30017226 gacggctgtgatcattggttgaagatctatctccgcttcccccatgatatcatcagcaga 30017285

                   
Query: 442      gaa 444
                |||
Sbjct: 30017286 gaa 30017288



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                            
Query: 465      caagttttaaaggtccataatttcgaggaactgatagagtaagaacctcattccataccg 524
                ||||||| | |||||||||||||||||||| |||||   |||| |||||||||||||| |
Sbjct: 30018076 caagtttaagaggtccataatttcgaggaattgatatcttaagcacctcattccatactg 30018135

                                                         
Query: 525      ggttcaggtcactcgctttaactgttgtttgagccttctgc 565
                |||||| |||||||| |||||| || |||||||| ||||||
Sbjct: 30018136 ggttcaagtcactcggtttaacagtggtttgagctttctgc 30018176



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>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0654B04
          Length = 156907

 Score =  244 bits (123), Expect = 3e-61
 Identities = 213/243 (87%)
 Strand = Plus / Plus

                                                                          
Query: 202    ccattccagttctaactccatctcacctgattctacgttctgcagctttaggttcacttc 261
              |||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||
Sbjct: 117322 ccattccagttctaactccatctcacctgattctacattctgcaactttaggtgcacttc 117381

                                                                          
Query: 262    ctgttttacctttcccgacgaaatattgacaatgctgtcgctcaacaggcaattgtctct 321
              |||||||||||| ||||||  || ||||||| |||| ||  ||| ||||  ||||||| |
Sbjct: 117382 ctgttttaccttgcccgacacaacattgacagtgctatctttcaccagggcattgtcttt 117441

                                                                          
Query: 322    ggtcatgaaccaccttccaatttgcatgtctgcgtgacgcgacgggtctccgaaggccat 381
              ||||||||||||||||||||||||||||||  |   |||||| || ||||| ||||||||
Sbjct: 117442 ggtcatgaaccaccttccaatttgcatgtcaccaacacgcgagggatctccaaaggccat 117501

                                                                          
Query: 382    ggcagctgtgatcattggcttcagatctatctctgcttcccccatgatatcgtcagcaga 441
              | | |||||||||||||| |  ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 117502 gacggctgtgatcattggttgaagatctatctccgcttcccccatgatatcatcagcaga 117561

                 
Query: 442    gaa 444
              |||
Sbjct: 117562 gaa 117564



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                          
Query: 465    caagttttaaaggtccataatttcgaggaactgatagagtaagaacctcattccataccg 524
              ||||||| | |||||||||||||||||||| |||||   |||| |||||||||||||| |
Sbjct: 118352 caagtttaagaggtccataatttcgaggaattgatatcttaagcacctcattccatactg 118411

                                                       
Query: 525    ggttcaggtcactcgctttaactgttgtttgagccttctgc 565
              |||||| |||||||| |||||| || |||||||| ||||||
Sbjct: 118412 ggttcaagtcactcggtttaacagtggtttgagctttctgc 118452



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>gb|AY109863.1| Zea mays CL6963_1 mRNA sequence
          Length = 1436

 Score =  165 bits (83), Expect = 2e-37
 Identities = 161/187 (86%)
 Strand = Plus / Minus

                                                                        
Query: 314  ttgtctctggtcatgaaccaccttccaatttgcatgtctgcgtgacgcgacgggtctccg 373
            |||||| |||||||||||||||| ||||||||||||||  |  |||| || |  ||||| 
Sbjct: 1011 ttgtctttggtcatgaaccacctcccaatttgcatgtcaccaagacgtgaagtatctcca 952

                                                                        
Query: 374  aaggccatggcagctgtgatcattggcttcagatctatctctgcttcccccatgatatcg 433
            ||||||||||| ||||||||||||||||  ||||||||||||||||| ||||||||||| 
Sbjct: 951  aaggccatggcggctgtgatcattggctggagatctatctctgcttcacccatgatatca 892

                                                                        
Query: 434  tcagcagagaaagtgtcgtgatcatacacttcaagttttaaaggtccataatttcgagga 493
            || || |||||  | || || ||||||||||||||||||| |||||| ||||||||||||
Sbjct: 891  tcggctgagaacatatcatggtcatacacttcaagttttagaggtccgtaatttcgagga 832

                   
Query: 494  actgata 500
            || ||||
Sbjct: 831  acagata 825



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                        
Query: 202  ccattccagttctaactccatctcacctgattctacgttctgcagctttaggttcacttc 261
            |||||| || |||||||||| |||||| |||||||||||||||||||||| || ||| ||
Sbjct: 1123 ccattctagctctaactccagctcaccagattctacgttctgcagctttaagtgcacctc 1064

                        
Query: 262  ctgttttacctt 273
            ||||||||||||
Sbjct: 1063 ctgttttacctt 1052



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>gb|AC149277.11| Mus musculus BAC clone RP24-213J23 from chromosome 7, complete sequence
          Length = 198579

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 119    aagcttcattaactagatatg 139
              |||||||||||||||||||||
Sbjct: 184438 aagcttcattaactagatatg 184458



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>gb|AC099007.2| Drosophila melanogaster clone BACR16B07, complete sequence
          Length = 172393

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 121    gcttcattaactagatatgttttg 144
              |||||||||||||||| |||||||
Sbjct: 100454 gcttcattaactagatgtgttttg 100431



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>gb|AC132412.2| Mus musculus BAC clone RP23-355N5 from chromosome 6, complete sequence
          Length = 171747

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     acattgtacagccttcattt 90
              ||||||||||||||||||||
Sbjct: 170822 acattgtacagccttcattt 170803



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 390      tgatcattggcttcagatct 409
                ||||||||||||||||||||
Sbjct: 13722667 tgatcattggcttcagatct 13722686



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>gb|AC122453.4| Mus musculus BAC clone RP24-258A18 from chromosome 17, complete
             sequence
          Length = 177389

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   taactagatatgttttgaag 147
             ||||||||||||||||||||
Sbjct: 21282 taactagatatgttttgaag 21301



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>gb|AC158340.9| Mus musculus chromosome 1, clone RP24-161N8, complete sequence
          Length = 163123

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 372   cgaaggccatggcagctgtg 391
             ||||||||||||||||||||
Sbjct: 45217 cgaaggccatggcagctgtg 45236



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>emb|AL731653.1| Human DNA sequence from clone RP11-33D13 on chromosome 10 Contains the
             gene for pancreatic lipase (PNLIP) and a pseudogene
             similar to part of pancreatic lipase (PNLIP), complete
             sequence
          Length = 65205

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 366   ggtctccgaaggccatggcagctg 389
             ||||||||||| ||||||||||||
Sbjct: 63843 ggtctccgaagtccatggcagctg 63866



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>emb|AL121757.7|HSDJ828H9 Human DNA sequence from clone RP5-828H9 on chromosome 20 Contains
           two novel genes and two CpG islands, complete sequence
          Length = 167013

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 204 attccagttctaactccatctcac 227
           ||||||||||| ||||||||||||
Sbjct: 277 attccagttctcactccatctcac 254



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>emb|AL050403.16|HSDJ697P8 Human DNA sequence from clone RP4-697P8 on chromosome 20 Contains two
             novel genes and the FAT1P1 gene for FAT tumour suppressor
             homolog 1 (Drosophila) pseudogene 1, complete sequence
          Length = 144924

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 153   cagcataaagggcaaaaggataca 176
             |||||||||||| |||||||||||
Sbjct: 39420 cagcataaaggggaaaaggataca 39397



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>emb|Y19210.1|HSDNAHB5 Homo sapiens KRTHB5 gene for type II hair keratin 5, exons 1 to 9
          Length = 9851

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 318 ctctggtcatgaaccaccttccaa 341
           |||||||| |||||||||||||||
Sbjct: 918 ctctggtcctgaaccaccttccaa 941



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>gb|AC104008.4| Homo sapiens chromosome 8, clone RP11-192I2, complete sequence
          Length = 129898

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 332   caccttccaatttgcatgtctgcg 355
             |||||||||||||||||| |||||
Sbjct: 11546 caccttccaatttgcatggctgcg 11569



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>gb|AC016825.12| Homo sapiens chromosome 10 clone RP11-498B4, complete sequence
          Length = 198261

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 366 ggtctccgaaggccatggcagctg 389
           ||||||||||| ||||||||||||
Sbjct: 638 ggtctccgaagtccatggcagctg 661



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>gb|AC007184.4| Arabidopsis thaliana chromosome 2 clone T11P11 map mi54, complete
             sequence
          Length = 17599

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   attaactagatatgttttga 145
             ||||||||||||||||||||
Sbjct: 11498 attaactagatatgttttga 11517



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>gb|AC093881.2| Homo sapiens BAC clone RP11-655B23 from 4, complete sequence
          Length = 181245

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 137    atgttttgaagccatccagcataa 160
              ||||||| ||||||||||||||||
Sbjct: 114754 atgttttcaagccatccagcataa 114777



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>dbj|AK148759.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
            full-length enriched library, clone:7120442P12
            product:unclassifiable, full insert sequence
          Length = 5840

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 71   acattgtacagccttcattt 90
            ||||||||||||||||||||
Sbjct: 2585 acattgtacagccttcattt 2604



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 390      tgatcattggcttcagatct 409
                ||||||||||||||||||||
Sbjct: 13717642 tgatcattggcttcagatct 13717661



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>gb|AC078865.22| Homo sapiens 12 BAC RP3-416H24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 69230

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 318   ctctggtcatgaaccaccttccaa 341
             |||||||| |||||||||||||||
Sbjct: 45124 ctctggtcctgaaccaccttccaa 45147



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>gb|AC104244.9| Homo sapiens chromosome 8, clone RP11-1038G5, complete sequence
          Length = 155899

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 332   caccttccaatttgcatgtctgcg 355
             |||||||||||||||||| |||||
Sbjct: 64266 caccttccaatttgcatggctgcg 64243



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>gb|AC137076.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0033D20, from chromosome 3, complete sequence
          Length = 128707

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 390    tgatcattggcttcagatct 409
              ||||||||||||||||||||
Sbjct: 113339 tgatcattggcttcagatct 113358



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>gb|AC146595.2| Mus musculus BAC clone RP24-164G18 from chromosome 17, complete sequence
          Length = 132103

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    taactagatatgttttgaag 147
              ||||||||||||||||||||
Sbjct: 115212 taactagatatgttttgaag 115231



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>emb|AJ000238.1|HVJ000238 Hordeum vulgare mRNA for expressed sequence tag
          Length = 300

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 442 gaaagtgtcgtgatcatacacttc 465
           |||||||||||||||||| |||||
Sbjct: 113 gaaagtgtcgtgatcataaacttc 90



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>gb|AE003452.5| Drosophila melanogaster chromosome 2R, section 60 of 73 of the complete
              sequence
          Length = 303438

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 121    gcttcattaactagatatgttttg 144
              |||||||||||||||| |||||||
Sbjct: 291685 gcttcattaactagatgtgttttg 291708



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>dbj|AP001120.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-677O4, complete
              sequence
          Length = 181123

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    tcacttcctgttttaccttt 274
              ||||||||||||||||||||
Sbjct: 113707 tcacttcctgttttaccttt 113726



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>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome
          Length = 1992676

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 84      ttcatttttacacatttcgg 103
               ||||||||||||||||||||
Sbjct: 1345326 ttcatttttacacatttcgg 1345345



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>gb|AC128664.3| Mus musculus BAC clone RP24-328H10 from 6, complete sequence
          Length = 147041

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    acattgtacagccttcattt 90
             ||||||||||||||||||||
Sbjct: 46262 acattgtacagccttcattt 46243



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>gb|AC004313.1|AC004313 Drosophila melanogaster (P1 DS02368 (D205)) DNA sequence, complete
             sequence
          Length = 80993

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 121   gcttcattaactagatatgttttg 144
             |||||||||||||||| |||||||
Sbjct: 64364 gcttcattaactagatgtgttttg 64341



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>gb|AC135863.4| Mus musculus BAC clone RP23-453H18 from 1, complete sequence
          Length = 197162

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 281    gaaatattgacaatgctgtc 300
              ||||||||||||||||||||
Sbjct: 118637 gaaatattgacaatgctgtc 118618


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,389,435
Number of Sequences: 3902068
Number of extensions: 5389435
Number of successful extensions: 96155
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96010
Number of HSP's gapped (non-prelim): 141
length of query: 591
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 568
effective length of database: 17,143,297,704
effective search space: 9737393095872
effective search space used: 9737393095872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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