>gb|U83414.1|HVU83414 Hordeum vulgare cytosolic triosephosphate isomerase mRNA, complete
           cds
          Length = 1028

 Score = 71.9 bits (36), Expect = 8e-11
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                               
Query: 1   acaaaattactagcatagtacacataataaacataa 36
           ||||||||||||||||||||||||||||||||||||
Sbjct: 936 acaaaattactagcatagtacacataataaacataa 901

>emb|Z26875.1|SCTRPIS S.cereale tpi gene for triosephosphate isomerase
          Length = 1033

 Score = 52.0 bits (26), Expect = 7e-05
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 1   acaaaattactagcatagtacacata 26
           ||||||||||||||||||||||||||
Sbjct: 928 acaaaattactagcatagtacacata 903

>emb|BX000480.6| Zebrafish DNA sequence from clone DKEY-14C5 in linkage group 17,
             complete sequence
          Length = 191781

 Score = 40.1 bits (20), Expect = 0.27
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    agtacacataataaacataa 36
             ||||||||||||||||||||
Sbjct: 40602 agtacacataataaacataa 40621

>gb|BC072750.1| Xenopus laevis MGC79115 protein, mRNA (cDNA clone MGC:79115
            IMAGE:5049282), complete cds
          Length = 6004

 Score = 38.2 bits (19), Expect = 1.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 14   catagtacacataataaacataa 36
            ||||| |||||||||||||||||
Sbjct: 3624 catagaacacataataaacataa 3646

>emb|BX649600.8| Zebrafish DNA sequence from clone CH211-222M18 in linkage group 18,
              complete sequence
          Length = 228633

 Score = 38.2 bits (19), Expect = 1.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 18     gtacacataataaacataa 36
              |||||||||||||||||||
Sbjct: 143034 gtacacataataaacataa 143016

>gb|AC119905.11| Mus musculus chromosome 17, clone RP24-238N14, complete sequence
          Length = 179042

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 5      aattactagcatagtaca 22
              ||||||||||||||||||
Sbjct: 178566 aattactagcatagtaca 178583

>gb|AC135242.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0070D14, complete sequence
          Length = 174780

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 4     aaattactagcatagtac 21
             ||||||||||||||||||
Sbjct: 96908 aaattactagcatagtac 96925

>emb|Z15118.1|KTTBMAXVR T.brucei kinetoplast maxicircle variable region DNA
          Length = 7395

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 19   tacacataataaacataa 36
            ||||||||||||||||||
Sbjct: 7347 tacacataataaacataa 7330

>emb|CT009574.5| Mouse DNA sequence from clone RP23-140H11 on chromosome 17, complete
              sequence
          Length = 204822

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 5      aattactagcatagtaca 22
              ||||||||||||||||||
Sbjct: 190182 aattactagcatagtaca 190165

>emb|CR536604.6| Zebrafish DNA sequence from clone DKEY-57A22 in linkage group 9, complete
              sequence
          Length = 217381

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 19     tacacataataaacataa 36
              ||||||||||||||||||
Sbjct: 202576 tacacataataaacataa 202559

>emb|AL606605.4|OSJN00049 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089E12,
             complete sequence
          Length = 154111

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 4     aaattactagcatagtac 21
             ||||||||||||||||||
Sbjct: 92622 aaattactagcatagtac 92639

>emb|AL161551.2|ATCHRIV51 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 51
          Length = 197114

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 19    tacacataataaacataa 36
             ||||||||||||||||||
Sbjct: 49376 tacacataataaacataa 49393

>emb|AL021768.1|ATF24J7 Arabidopsis thaliana DNA chromosome 4, BAC clone F24J7 (ESSA project)
          Length = 86554

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 19    tacacataataaacataa 36
             ||||||||||||||||||
Sbjct: 52016 tacacataataaacataa 52033

>emb|CR788242.3| Zebrafish DNA sequence from clone DKEY-239H16 in linkage group 13,
             complete sequence
          Length = 143940

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 18    gtacacataataaacata 35
             ||||||||||||||||||
Sbjct: 74810 gtacacataataaacata 74793

>gb|AC100835.2| Homo sapiens chromosome 15, clone CTD-3154N5, complete sequence
          Length = 165036

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 19     tacacataataaacataa 36
              ||||||||||||||||||
Sbjct: 126230 tacacataataaacataa 126247

>gb|AC068688.10| Homo sapiens chromosome 18, clone RP11-10C23, complete sequence
          Length = 108479

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 19    tacacataataaacataa 36
             ||||||||||||||||||
Sbjct: 23636 tacacataataaacataa 23619

>gb|AC009866.6| Homo sapiens chromosome 11, clone RP11-61E7, complete sequence
          Length = 177564

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 19    tacacataataaacataa 36
             ||||||||||||||||||
Sbjct: 60371 tacacataataaacataa 60354

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 4       aaattactagcatagtac 21
               ||||||||||||||||||
Sbjct: 3749201 aaattactagcatagtac 3749218

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 4        aaattactagcatagtac 21
                ||||||||||||||||||
Sbjct: 15103944 aaattactagcatagtac 15103961

>gb|AC078931.9|AC078931 Mus musculus  BAC RP23-419E4 (Roswell Park Cancer Institute Mouse BAC
              Library) complete sequence
          Length = 188750

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 5      aattactagcatagtaca 22
              ||||||||||||||||||
Sbjct: 158161 aattactagcatagtaca 158144

>gb|AC115857.16| Mus musculus chromosome 5, clone RP24-280I13, complete sequence
          Length = 163661

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 17   agtacacataataaacat 34
            ||||||||||||||||||
Sbjct: 6295 agtacacataataaacat 6278

>gb|AC154189.2| Mus musculus BAC clone RP24-458A18 from 17, complete sequence
          Length = 175733

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 5     aattactagcatagtaca 22
             ||||||||||||||||||
Sbjct: 91871 aattactagcatagtaca 91888

>gb|AC154260.2| Mus musculus BAC clone RP24-225C5 from 17, complete sequence
          Length = 187652

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 19    tacacataataaacataa 36
             ||||||||||||||||||
Sbjct: 77179 tacacataataaacataa 77162

>gb|AC105335.27| Mus musculus chromosome 5, clone RP23-377H14, complete sequence
          Length = 171789

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 17    agtacacataataaacat 34
             ||||||||||||||||||
Sbjct: 22181 agtacacataataaacat 22198

>emb|CT573013.7| Mouse DNA sequence from clone RP23-303A9 on chromosome 17, complete
             sequence
          Length = 109475

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 5     aattactagcatagtaca 22
             ||||||||||||||||||
Sbjct: 11160 aattactagcatagtaca 11143

>emb|CT573043.10| Mouse DNA sequence from clone RP23-24G19 on chromosome 17, complete
             sequence
          Length = 93027

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 5     aattactagcatagtaca 22
             ||||||||||||||||||
Sbjct: 41396 aattactagcatagtaca 41413

>emb|BX511097.21| Zebrafish DNA sequence from clone DKEYP-93C5 in linkage group 2,
             complete sequence
          Length = 134883

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 19    tacacataataaacataa 36
             ||||||||||||||||||
Sbjct: 33060 tacacataataaacataa 33077

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 4        aaattactagcatagtac 21
                ||||||||||||||||||
Sbjct: 15185642 aaattactagcatagtac 15185659

>gb|AC010625.6| Homo sapiens chromosome 5 clone CTD-2128F4, complete sequence
          Length = 139409

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 10    ctagcatagtacacataa 27
             ||||||||||||||||||
Sbjct: 36234 ctagcatagtacacataa 36251

>gb|M18978.1|TRBKPVR T.brucei kinetoplast maxicircle DNA, variable region R3-D3
          Length = 1335

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 19   tacacataataaacataa 36
            ||||||||||||||||||
Sbjct: 1313 tacacataataaacataa 1296

>gb|M94286.1|TRBKPGEN Trypanosoma brucei brucei kinetoplast maxicircle genes, putative cds
          Length = 23016

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 19   tacacataataaacataa 36
            ||||||||||||||||||
Sbjct: 1315 tacacataataaacataa 1298


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 350,920
Number of Sequences: 3902068
Number of extensions: 350920
Number of successful extensions: 85397
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85270
Number of HSP's gapped (non-prelim): 127
length of query: 39
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 19
effective length of database: 17,155,003,908
effective search space: 325945074252
effective search space used: 325945074252
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)