| Clone Name | rbags5d07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_481639.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1647 Score = 250 bits (126), Expect = 4e-63 Identities = 216/248 (87%) Strand = Plus / Minus Query: 278 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 337 ||||||||||||||||| ||||| || || ||||||||||| |||||||||||||||||| Sbjct: 1311 gggctgtcaactgcaagccccattgtattgagtccattgtcaacgtaaacagtcgagcca 1252 Query: 338 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgcc 397 ||||| || |||||||| ||||||||||| |||||||| || ||||| ||||| |||||| Sbjct: 1251 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccccacttcgtctgcc 1192 Query: 398 agaagctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaat 457 | || || |||||||| ||||| || ||||||||||| || |||||||||||||||||| Sbjct: 1191 aacagttctttctgcaacggtgcattaacataagagtattctatcatcttctcaatgaat 1132 Query: 458 ccaattgccttggcggctctgcttnccagaggacctgcanatatggngttnactcnnatt 517 |||||||||||||| |||| |||| ||| |||||||||| |||||| ||| |||| ||| Sbjct: 1131 ccaattgccttggcagctcggcttcccaaaggacctgcagatatggtgttaactctgatt 1072 Query: 518 ttgccttt 525 || ||||| Sbjct: 1071 ttcccttt 1064 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 182 tactaactaactaagctctttattcaa 208 ||||| ||||||||||||||||||||| Sbjct: 1404 tactacctaactaagctctttattcaa 1378
>gb|DQ083199.1| Oryza sativa (indica cultivar-group) clone 5S11F12 mRNA sequence Length = 443 Score = 250 bits (126), Expect = 4e-63 Identities = 216/248 (87%) Strand = Plus / Minus Query: 278 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 337 ||||||||||||||||| ||||| || || ||||||||||| |||||||||||||||||| Sbjct: 270 gggctgtcaactgcaagccccattgtattgagtccattgtcaacgtaaacagtcgagcca 211 Query: 338 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgcc 397 ||||| || |||||||| ||||||||||| |||||||| || ||||| ||||| |||||| Sbjct: 210 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccccacttcgtctgcc 151 Query: 398 agaagctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaat 457 | || || |||||||| ||||| || ||||||||||| || |||||||||||||||||| Sbjct: 150 aacagttctttctgcaacggtgcattaacataagagtattctatcatcttctcaatgaat 91 Query: 458 ccaattgccttggcggctctgcttnccagaggacctgcanatatggngttnactcnnatt 517 |||||||||||||| |||| |||| ||| |||||||||| |||||| ||| |||| ||| Sbjct: 90 ccaattgccttggcagctcggcttcccaaaggacctgcagatatggtgttaactctgatt 31 Query: 518 ttgccttt 525 || ||||| Sbjct: 30 ttcccttt 23 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 182 tactaactaactaagctctttattcaa 208 ||||| ||||||||||||||||||||| Sbjct: 363 tactacctaactaagctctttattcaa 337
>dbj|AK070992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077K10, full insert sequence Length = 1647 Score = 250 bits (126), Expect = 4e-63 Identities = 216/248 (87%) Strand = Plus / Minus Query: 278 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 337 ||||||||||||||||| ||||| || || ||||||||||| |||||||||||||||||| Sbjct: 1311 gggctgtcaactgcaagccccattgtattgagtccattgtcaacgtaaacagtcgagcca 1252 Query: 338 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgcc 397 ||||| || |||||||| ||||||||||| |||||||| || ||||| ||||| |||||| Sbjct: 1251 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccccacttcgtctgcc 1192 Query: 398 agaagctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaat 457 | || || |||||||| ||||| || ||||||||||| || |||||||||||||||||| Sbjct: 1191 aacagttctttctgcaacggtgcattaacataagagtattctatcatcttctcaatgaat 1132 Query: 458 ccaattgccttggcggctctgcttnccagaggacctgcanatatggngttnactcnnatt 517 |||||||||||||| |||| |||| ||| |||||||||| |||||| ||| |||| ||| Sbjct: 1131 ccaattgccttggcagctcggcttcccaaaggacctgcagatatggtgttaactctgatt 1072 Query: 518 ttgccttt 525 || ||||| Sbjct: 1071 ttcccttt 1064 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 182 tactaactaactaagctctttattcaa 208 ||||| ||||||||||||||||||||| Sbjct: 1404 tactacctaactaagctctttattcaa 1378
>gb|BT016571.1| Zea mays clone Contig404 mRNA sequence Length = 1517 Score = 194 bits (98), Expect = 2e-46 Identities = 209/248 (84%) Strand = Plus / Minus Query: 278 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 337 |||||||||| |||||| ||||| || || || |||||||| || |||||||||||||| Sbjct: 1178 gggctgtcaattgcaagccccattgtattgagcccattgtcaacataaacagtcgagccg 1119 Query: 338 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgcc 397 ||||||||||||||||| | ||| ||||| ||||| || || ||||| || ||||| ||| Sbjct: 1118 gtgatggcagaagccaatgaagaaaccaggaatgcagctgtgttccccacctcatcagcc 1059 Query: 398 agaagctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaat 457 | |||||||||||||||||||| || ||||| |||||||| |||||||||||||| ||| Sbjct: 1058 aacagctccttctgcaatggtgcattaacatatgagtactctatcatcttctcaataaat 999 Query: 458 ccaattgccttggcggctctgcttnccagaggacctgcanatatggngttnactcnnatt 517 ||||||||||| || |||| ||| | ||||| ||||| |||||| ||| |||| ||| Sbjct: 998 ccaattgccttagcagctcggctcccaagagggcctgctgatatggtgttaactctgatt 939 Query: 518 ttgccttt 525 |||||||| Sbjct: 938 ttgccttt 931
>gb|AY112451.1| Zea mays CL3046_1 mRNA sequence Length = 1482 Score = 194 bits (98), Expect = 2e-46 Identities = 209/248 (84%) Strand = Plus / Minus Query: 278 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 337 |||||||||| |||||| ||||| || || || |||||||| || |||||||||||||| Sbjct: 1174 gggctgtcaattgcaagccccattgtattgagcccattgtcaacataaacagtcgagccg 1115 Query: 338 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgcc 397 ||||||||||||||||| | ||| ||||| ||||| || || ||||| || ||||| ||| Sbjct: 1114 gtgatggcagaagccaatgaagaaaccaggaatgcagctgtgttccccacctcatcagcc 1055 Query: 398 agaagctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaat 457 | |||||||||||||||||||| || ||||| |||||||| |||||||||||||| ||| Sbjct: 1054 aacagctccttctgcaatggtgcattaacatatgagtactctatcatcttctcaataaat 995 Query: 458 ccaattgccttggcggctctgcttnccagaggacctgcanatatggngttnactcnnatt 517 ||||||||||| || |||| ||| | ||||| ||||| |||||| ||| |||| ||| Sbjct: 994 ccaattgccttagcagctcggctcccaagagggcctgctgatatggtgttaactctgatt 935 Query: 518 ttgccttt 525 |||||||| Sbjct: 934 ttgccttt 927
>emb|AJ003025.1|OSENOYLAC Oryza sativa mRNA for enoyl-ACP reductase Length = 1520 Score = 190 bits (96), Expect = 3e-45 Identities = 188/219 (85%) Strand = Plus / Minus Query: 278 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 337 ||||||||||||||||| ||||| || || |||||||||| ||||| |||||||||||| Sbjct: 1148 gggctgtcaactgcaagccccattgtattgagtccattgtgaacgtacacagtcgagcca 1089 Query: 338 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgcc 397 ||||| || |||||||| ||||||||||| |||||||| || ||||| ||||| |||||| Sbjct: 1088 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccccacttcgtctgcc 1029 Query: 398 agaagctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaat 457 | || || ||||| || ||||| | ||||||||||| || || ||||||||||||||| Sbjct: 1028 aacagttctttctgaaacggtgcataaacataagagtattctatgatcttctcaatgaat 969 Query: 458 ccaattgccttggcggctctgcttnccagaggacctgca 496 |||||||||||||| |||| |||| ||| |||||||||| Sbjct: 968 ccaattgccttggcagctcggcttcccaaaggacctgca 930
>gb|AY106087.1| Zea mays PCO109463 mRNA sequence Length = 1496 Score = 184 bits (93), Expect = 2e-43 Identities = 210/251 (83%) Strand = Plus / Minus Query: 275 gtggggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgag 334 ||||||||||||| |||||| ||||| ||||| || |||||||| ||||||| ||| || Sbjct: 1223 gtggggctgtcaagtgcaagtcccattgtgttgagcccattgtcaacgtaaatagttgaa 1164 Query: 335 ccagtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatct 394 |||||||| || || ||||||||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 1163 ccagtgattgctgatgccaaaggagacaccaggaatgctgccgtgttccccacttcatct 1104 Query: 395 gccagaagctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatg 454 |||| | ||||| |||| |||||| || |||||||| ||||| ||||||||||| || Sbjct: 1103 gccaataattccttttgcagtggtgcattaacataagaatactctatcatcttctcgata 1044 Query: 455 aatccaattgccttggcggctctgcttnccagaggacctgcanatatggngttnactcnn 514 |||||||| || || || |||| |||| ||| |||||||| |||||| ||| |||| Sbjct: 1043 aatccaatggcttttgctgctcggcttcccaatggacctgctgatatggtgttcactctg 984 Query: 515 attttgccttt 525 ||||||||||| Sbjct: 983 attttgccttt 973
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 131 bits (66), Expect = 3e-27 Identities = 105/118 (88%) Strand = Plus / Minus Query: 278 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 337 ||||||||||||||||| ||||| || || ||||||||||| |||||||||||||||||| Sbjct: 14411413 gggctgtcaactgcaagccccattgtattgagtccattgtcaacgtaaacagtcgagcca 14411354 Query: 338 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctg 395 ||||| || |||||||| ||||||||||| |||||||| || ||||| ||||| |||| Sbjct: 14411353 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccccacttcgtctg 14411296 Score = 103 bits (52), Expect = 6e-19 Identities = 78/87 (89%) Strand = Plus / Minus Query: 407 ttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaatccaattgcc 466 |||||||| ||||| || ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 14411178 ttctgcaacggtgcattaacataagagtattctatcatcttctcaatgaatccaattgcc 14411119 Query: 467 ttggcggctctgcttnccagaggacct 493 ||||| |||| |||| ||| ||||||| Sbjct: 14411118 ttggcagctcggcttcccaaaggacct 14411092 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 182 tactaactaactaagctctttattcaa 208 ||||| ||||||||||||||||||||| Sbjct: 14411506 tactacctaactaagctctttattcaa 14411480
>dbj|AP005490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0049I01 Length = 140261 Score = 131 bits (66), Expect = 3e-27 Identities = 105/118 (88%) Strand = Plus / Minus Query: 278 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 337 ||||||||||||||||| ||||| || || ||||||||||| |||||||||||||||||| Sbjct: 6281 gggctgtcaactgcaagccccattgtattgagtccattgtcaacgtaaacagtcgagcca 6222 Query: 338 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctg 395 ||||| || |||||||| ||||||||||| |||||||| || ||||| ||||| |||| Sbjct: 6221 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccccacttcgtctg 6164 Score = 103 bits (52), Expect = 6e-19 Identities = 78/87 (89%) Strand = Plus / Minus Query: 407 ttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaatccaattgcc 466 |||||||| ||||| || ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 6046 ttctgcaacggtgcattaacataagagtattctatcatcttctcaatgaatccaattgcc 5987 Query: 467 ttggcggctctgcttnccagaggacct 493 ||||| |||| |||| ||| ||||||| Sbjct: 5986 ttggcagctcggcttcccaaaggacct 5960 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 182 tactaactaactaagctctttattcaa 208 ||||| ||||||||||||||||||||| Sbjct: 6374 tactacctaactaagctctttattcaa 6348
>dbj|AP004759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0670E08 Length = 133106 Score = 131 bits (66), Expect = 3e-27 Identities = 105/118 (88%) Strand = Plus / Minus Query: 278 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 337 ||||||||||||||||| ||||| || || ||||||||||| |||||||||||||||||| Sbjct: 55696 gggctgtcaactgcaagccccattgtattgagtccattgtcaacgtaaacagtcgagcca 55637 Query: 338 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctg 395 ||||| || |||||||| ||||||||||| |||||||| || ||||| ||||| |||| Sbjct: 55636 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccccacttcgtctg 55579 Score = 103 bits (52), Expect = 6e-19 Identities = 78/87 (89%) Strand = Plus / Minus Query: 407 ttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaatccaattgcc 466 |||||||| ||||| || ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 55461 ttctgcaacggtgcattaacataagagtattctatcatcttctcaatgaatccaattgcc 55402 Query: 467 ttggcggctctgcttnccagaggacct 493 ||||| |||| |||| ||| ||||||| Sbjct: 55401 ttggcagctcggcttcccaaaggacct 55375 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 182 tactaactaactaagctctttattcaa 208 ||||| ||||||||||||||||||||| Sbjct: 55789 tactacctaactaagctctttattcaa 55763
>ref|XM_450461.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1652 Score = 107 bits (54), Expect = 4e-20 Identities = 198/248 (79%) Strand = Plus / Minus Query: 278 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 337 |||||||||| |||||| ||||| || || || |||||||| || || | ||| || ||| Sbjct: 1227 gggctgtcaagtgcaagtcccattgtattgagcccattgtcaacatagatagttgatcca 1168 Query: 338 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgcc 397 ||||| ||||| ||||| || || | | |||||||| || ||||| |||||||||||| Sbjct: 1167 gtgattgcagatgccaacggcgatgctaagaatgctgctgtgttccccacttcatctgcc 1108 Query: 398 agaagctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaat 457 | ||||||||||||| ||||||||| || || || ||||| ||||||||||| ||||| Sbjct: 1107 aagagctccttctgcagtggtgcgttcacgtacgaatactctatcatcttctcgatgaaa 1048 Query: 458 ccaattgccttggcggctctgcttnccagaggacctgcanatatggngttnactcnnatt 517 ||||| || ||||| |||| ||| ||| |||||||| |||||| || |||| || Sbjct: 1047 ccaatagctttggctgctcgacttcccaatggacctgctgatatggtattcactctgatc 988 Query: 518 ttgccttt 525 |||||||| Sbjct: 987 ttgccttt 980
>dbj|AK103141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120G12, full insert sequence Length = 1652 Score = 107 bits (54), Expect = 4e-20 Identities = 198/248 (79%) Strand = Plus / Minus Query: 278 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 337 |||||||||| |||||| ||||| || || || |||||||| || || | ||| || ||| Sbjct: 1227 gggctgtcaagtgcaagtcccattgtattgagcccattgtcaacatagatagttgatcca 1168 Query: 338 gtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgcc 397 ||||| ||||| ||||| || || | | |||||||| || ||||| |||||||||||| Sbjct: 1167 gtgattgcagatgccaacggcgatgctaagaatgctgctgtgttccccacttcatctgcc 1108 Query: 398 agaagctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaat 457 | ||||||||||||| ||||||||| || || || ||||| ||||||||||| ||||| Sbjct: 1107 aagagctccttctgcagtggtgcgttcacgtacgaatactctatcatcttctcgatgaaa 1048 Query: 458 ccaattgccttggcggctctgcttnccagaggacctgcanatatggngttnactcnnatt 517 ||||| || ||||| |||| ||| ||| |||||||| |||||| || |||| || Sbjct: 1047 ccaatagctttggctgctcgacttcccaatggacctgctgatatggtattcactctgatc 988 Query: 518 ttgccttt 525 |||||||| Sbjct: 987 ttgccttt 980
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 65.9 bits (33), Expect = 1e-07 Identities = 80/96 (83%) Strand = Plus / Minus Query: 401 agctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaatcca 460 ||||||||||||| ||||||||| || || || ||||| ||||||||||| ||||| ||| Sbjct: 5731119 agctccttctgcagtggtgcgttcacgtacgaatactctatcatcttctcgatgaaacca 5731060 Query: 461 attgccttggcggctctgcttnccagaggacctgca 496 || || ||||| |||| ||| ||| ||||||||| Sbjct: 5731059 atagctttggctgctcgacttcccaatggacctgca 5731024
>dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701E06 Length = 123415 Score = 65.9 bits (33), Expect = 1e-07 Identities = 80/96 (83%) Strand = Plus / Minus Query: 401 agctccttctgcaatggtgcgttgacataagagtactcgatcatcttctcaatgaatcca 460 ||||||||||||| ||||||||| || || || ||||| ||||||||||| ||||| ||| Sbjct: 27324 agctccttctgcagtggtgcgttcacgtacgaatactctatcatcttctcgatgaaacca 27265 Query: 461 attgccttggcggctctgcttnccagaggacctgca 496 || || ||||| |||| ||| ||| ||||||||| Sbjct: 27264 atagctttggctgctcgacttcccaatggacctgca 27229
>emb|AJ243090.1|BNA243090 Brassica napus mRNA for enoyl-[acyl-carrier protein] reductase, isoform B2 (enrB2 gene) Length = 1380 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 335 ccagtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatct 394 ||||| |||||||| ||||| ||||| |||| || ||||||| |||||| ||||||||| Sbjct: 1137 ccagttatggcagatgccaatggagataccaagaaggctgccgcattcccaacttcatct 1078 Query: 395 gc 396 || Sbjct: 1077 gc 1076
>gb|S60064.1|S60064 Brassica napus enoyl-acyl carrier protein reductase mRNA, complete cds Length = 1358 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 335 ccagtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatct 394 ||||| |||||||| ||||| ||||| |||| || ||||||| |||||| ||||||||| Sbjct: 1119 ccagttatggcagatgccaatggagataccaagaaggctgccgcattcccaacttcatct 1060 Query: 395 gc 396 || Sbjct: 1059 gc 1058
>emb|AJ003124.1|PHAJ3124 Petunia hybrida pte gene Length = 5047 Score = 50.1 bits (25), Expect = 0.007 Identities = 64/77 (83%) Strand = Plus / Minus Query: 311 ccattgtcgacgtaaacagtcgagccagtgatggcagaagccaaaggagacaccagaaat 370 |||||||| || || ||||| | ||||||||| || |||||||||||||| ||||||| Sbjct: 4265 ccattgtcaacatacacagtggcgccagtgattgctgaagccaaaggagatgccagaaaa 4206 Query: 371 gctgccgtattcccgac 387 || || || |||||||| Sbjct: 4205 gcagcagtgttcccgac 4189
>gb|AC105749.2| Homo sapiens chromosome 3 clone RP11-640L9, complete sequence Length = 200450 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 128 cagccatcccctcttttttctcctgcc 154 ||||| ||||||||||||||||||||| Sbjct: 178821 cagccttcccctcttttttctcctgcc 178847
>gb|AC097360.2| Homo sapiens chromosome 3 clone RP11-344C13, complete sequence Length = 166349 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 128 cagccatcccctcttttttctcctgcc 154 ||||| ||||||||||||||||||||| Sbjct: 121280 cagccttcccctcttttttctcctgcc 121306
>emb|AJ243088.1|BNA243088 Brassica napus mRNA for enoyl-[acyl-carrier protein] reductase, isoform A2 (enrA2 gene) Length = 1332 Score = 44.1 bits (22), Expect = 0.45 Identities = 52/62 (83%) Strand = Plus / Minus Query: 335 ccagtgatggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatct 394 ||||| |||||||| ||||| ||||| |||| || ||||| | |||||| ||||||||| Sbjct: 1112 ccagttatggcagaggccaatggagataccaagaaggctgctgcattcccaacttcatct 1053 Query: 395 gc 396 || Sbjct: 1052 gc 1051
>gb|AC025056.5|AC025056 Homo sapiens chromosome 8, clone RP11-400G5, complete sequence Length = 166222 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 ctctttattcaacacaatcaag 218 |||||||||||||||||||||| Sbjct: 88371 ctctttattcaacacaatcaag 88350
>emb|AL118557.5|CNS01DRT Human chromosome 14 DNA sequence BAC R-1033H12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 214175 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 caacagccatcccctctttttt 146 |||||||||||||||||||||| Sbjct: 81157 caacagccatcccctctttttt 81178
>dbj|AB009777.1| Homo sapiens gene for osteonidogen, promoter region Length = 5332 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 125 caacagccatcccctctttttt 146 |||||||||||||||||||||| Sbjct: 510 caacagccatcccctctttttt 489
>gb|AC157562.8| Mus musculus chromosome 1, clone RP24-304A3, complete sequence Length = 120189 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 acagtatcagcaacaacaaca 60 ||||||||||||||||||||| Sbjct: 53372 acagtatcagcaacaacaaca 53352
>emb|AL450345.6| Human DNA sequence from clone RP11-300M24 on chromosome 6 Contains a novel gene, complete sequence Length = 183342 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 acagtatcagcaacaacaaca 60 ||||||||||||||||||||| Sbjct: 48741 acagtatcagcaacaacaaca 48721
>emb|AL158214.33| Human DNA sequence from clone RP11-543E8 on chromosome 1q42.2-43 Contains a novel gene, a ribosomal protein S24 (RPS24) pseudogene, the COG2 gene for component of oligomeric golgi complex 2, the 3' end of the AGT gene for angiotensinogen (serine (or cysteine) proteinase inhibitor,clade A (alpha-1 antiproteinase, antitrypsin), member 8) and a CpG island, complete sequence Length = 181175 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 ttttctcctgccctcagctct 163 ||||||||||||||||||||| Sbjct: 70400 ttttctcctgccctcagctct 70380
>gb|AC079320.9| Homo sapiens chromosome 5, clone RP11-729C24, complete sequence Length = 160042 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 cctcttttttctcctgccctc 157 ||||||||||||||||||||| Sbjct: 33748 cctcttttttctcctgccctc 33728
>gb|AC116366.2| Homo sapiens chromosome 5 clone RP11-89G4, complete sequence Length = 169385 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 cctcttttttctcctgccctc 157 ||||||||||||||||||||| Sbjct: 98711 cctcttttttctcctgccctc 98691
>gb|AC112083.7| Rattus norvegicus BAC CH230-288C21 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 191137 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 332 gagccagtgatggcagaagccaaag 356 |||| |||||||||||||||||||| Sbjct: 66016 gagcaagtgatggcagaagccaaag 65992
>gb|AC156804.2| Pan troglodytes BAC clone CH251-371A18 from chromosome unknown, complete sequence Length = 232130 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 cctcttttttctcctgccctc 157 ||||||||||||||||||||| Sbjct: 95165 cctcttttttctcctgccctc 95145
>gb|AC005386.1|AC005386 citb_57_l_21, complete sequence Length = 196361 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 ttttctcctgccctcagctct 163 ||||||||||||||||||||| Sbjct: 163508 ttttctcctgccctcagctct 163488
>gb|L81766.1|HSL81766 Homo sapiens (subclone 9_d11 from P1 H18) DNA sequence, complete sequence Length = 4220 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 cctcttttttctcctgccctc 157 ||||||||||||||||||||| Sbjct: 3882 cctcttttttctcctgccctc 3902
>gb|L05072.1|HUMIFNRF1A Homo sapiens interferon regulatory factor 1 gene, complete cds Length = 7721 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 cctcttttttctcctgccctc 157 ||||||||||||||||||||| Sbjct: 3606 cctcttttttctcctgccctc 3626
>ref|NM_187851.1| Oryza sativa (japonica cultivar-group), Ozsa8295 predicted mRNA Length = 2382 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 gtatcagcaacaacaacatt 62 |||||||||||||||||||| Sbjct: 1748 gtatcagcaacaacaacatt 1729
>gb|AC118698.7| Mus musculus chromosome 1, clone RP24-82I5, complete sequence Length = 233783 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 339 tgatggcagaagccaaaggagaca 362 |||||||||||||||||| ||||| Sbjct: 50005 tgatggcagaagccaaagcagaca 49982
>gb|AC126469.7| Homo sapiens 3 BAC RP11-644C3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 110204 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 atggcagaagccaaaggaga 360 |||||||||||||||||||| Sbjct: 25665 atggcagaagccaaaggaga 25684
>emb|AL109627.18|HSJ733M16 Human DNA sequence from clone RP4-733M16 on chromosome 1p36.11-36.23 Contains four novel genes, a novel gene (FLJ33962), a novel gene (MGC10731), the 3' end of a novel gene (KIAA1332), a metallothionein family pseudogene and three CpG islands, complete sequence Length = 120825 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 atggcagaagccaaaggaga 360 |||||||||||||||||||| Sbjct: 30330 atggcagaagccaaaggaga 30311
>emb|X95462.1|BNENOYLRD B.napus mRNA for enoyl reductase Length = 1351 Score = 40.1 bits (20), Expect = 7.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 341 atggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgc 396 |||||||| ||||| ||||| |||| || ||||| | |||||| ||||||||||| Sbjct: 1129 atggcagaggccaatggagataccaagaaggctgctgcattcccaacttcatctgc 1074
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 451 aatgaatccaattgccttggcggc 474 ||||||||||| |||||||||||| Sbjct: 1150460 aatgaatccaactgccttggcggc 1150483
>gb|DQ121061.1| Hucho taimen clone ZA-56 microsatellite sequence Length = 726 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cagtatcagcaacaacaaca 60 |||||||||||||||||||| Sbjct: 498 cagtatcagcaacaacaaca 517
>emb|AL935259.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 8/11 Length = 254050 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 acaccagaaatgctgccgta 379 |||||||||||||||||||| Sbjct: 129282 acaccagaaatgctgccgta 129301
>emb|AL031744.8|PFMAL1P1 Plasmodium falciparum DNA from MAL1P1, complete sequence Length = 124330 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 ccatcccctcttttttctcc 150 |||||||||||||||||||| Sbjct: 13448 ccatcccctcttttttctcc 13429
>emb|AJ243087.1|BNA243087 Brassica napus mRNA for enoyl-[acyl-carrier protein] reductase, isoform 1A, (enrA1 gene) Length = 1349 Score = 40.1 bits (20), Expect = 7.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 341 atggcagaagccaaaggagacaccagaaatgctgccgtattcccgacttcatctgc 396 |||||||| ||||| ||||| |||| || ||||| | |||||| ||||||||||| Sbjct: 1131 atggcagaggccaatggagataccaagaaggctgctgcattcccaacttcatctgc 1076
>gb|AC008705.6| Homo sapiens chromosome 5 clone CTB-77H17, complete sequence Length = 159709 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 atggcagaagccaaaggaga 360 |||||||||||||||||||| Sbjct: 931 atggcagaagccaaaggaga 912
>gb|AC011369.4| Homo sapiens chromosome 5 clone CTB-105N12, complete sequence Length = 141529 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 atggcagaagccaaaggaga 360 |||||||||||||||||||| Sbjct: 98981 atggcagaagccaaaggaga 98962
>gb|AC087772.5|AC087772 Genomic Sequence for Mus musculus, clone RP23-326L17, complete sequence Length = 218905 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tgggccaaagaggtggtgct 102 |||||||||||||||||||| Sbjct: 108792 tgggccaaagaggtggtgct 108811
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 gagtactcgatcatcttctc 450 |||||||||||||||||||| Sbjct: 4139676 gagtactcgatcatcttctc 4139657
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 gtatcagcaacaacaacatt 62 |||||||||||||||||||| Sbjct: 8268088 gtatcagcaacaacaacatt 8268069
>gb|AC020968.3| Mus musculus chromosome 18 clone RP23-193O23, complete sequence Length = 199704 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tgggccaaagaggtggtgct 102 |||||||||||||||||||| Sbjct: 54397 tgggccaaagaggtggtgct 54416
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 gtatcagcaacaacaacatt 62 |||||||||||||||||||| Sbjct: 62019 gtatcagcaacaacaacatt 62000
>emb|BX649333.9| Zebrafish DNA sequence from clone DKEY-200F3 in linkage group 4, complete sequence Length = 273859 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 ccatcccctcttttttctcc 150 |||||||||||||||||||| Sbjct: 48803 ccatcccctcttttttctcc 48822
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 gagtactcgatcatcttctc 450 |||||||||||||||||||| Sbjct: 49690 gagtactcgatcatcttctc 49671
>gb|AC007955.4|AC007955 Homo sapiens chromosome 14 clone CTD-3014H8 and RP11-285P21 map 14q24.3, complete sequence Length = 163312 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 tcatcttctcaatgaatcca 460 |||||||||||||||||||| Sbjct: 114150 tcatcttctcaatgaatcca 114131
>ref|XM_308264.2| Anopheles gambiae str. PEST ENSANGP00000010835 (ENSANGG00000008346), partial mRNA Length = 381 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 atcagcaacaacaacattcg 64 |||||||||||||||||||| Sbjct: 269 atcagcaacaacaacattcg 288
>emb|AJ330610.1|HSA330610 Homo sapiens genomic sequence surrounding NotI site, clone HSJ4P-E15RS Length = 676 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 acaaatgggccaaagaggtggtgc 101 |||||||||||||||| ||||||| Sbjct: 524 acaaatgggccaaagaagtggtgc 501
>emb|BX000462.10| Zebrafish DNA sequence from clone DKEY-114F6 in linkage group 1, complete sequence Length = 167671 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 ccatcccctcttttttctcc 150 |||||||||||||||||||| Sbjct: 117201 ccatcccctcttttttctcc 117182
>emb|AL121768.4|CNS01DSB Human chromosome 14 DNA sequence BAC R-976B16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 213239 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 atggcagaagccaaaggaga 360 |||||||||||||||||||| Sbjct: 55793 atggcagaagccaaaggaga 55812
>emb|AL049832.3|CNS0000G Human chromosome 14 DNA sequence BAC R-63D17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 177172 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 tcatcttctcaatgaatcca 460 |||||||||||||||||||| Sbjct: 2655 tcatcttctcaatgaatcca 2674
>dbj|AP004250.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT47K21, TM0260, complete sequence Length = 79947 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cagtatcagcaacaacaaca 60 |||||||||||||||||||| Sbjct: 74546 cagtatcagcaacaacaaca 74527 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,972,036 Number of Sequences: 3902068 Number of extensions: 4972036 Number of successful extensions: 101411 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101176 Number of HSP's gapped (non-prelim): 235 length of query: 525 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 502 effective length of database: 17,143,297,704 effective search space: 8605935447408 effective search space used: 8605935447408 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)