ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4n24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK059169.1| Oryza sativa (japonica cultivar-group) cDNA clon... 363 5e-97
2ref|NM_191995.1| Oryza sativa (japonica cultivar-group), predic... 359 8e-96
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 252 1e-63
4dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic D... 252 1e-63
5dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic D... 252 1e-63
6gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome... 56 2e-04
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 56 2e-04
8dbj|AK065592.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 2e-04
9dbj|AK062165.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 2e-04
10ref|NM_123952.1| Arabidopsis thaliana ATP binding / protein kina... 50 0.010
11dbj|AB016870.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 50 0.010
12emb|CR548612.1| Paramecium tetraurelia macronuclear largest chro... 44 0.61
13gb|AC163622.4| Mus musculus BAC clone RP24-566G6 from chromosome... 42 2.4
14gb|AC140187.3| Mus musculus BAC clone RP24-364N20 from chromosom... 42 2.4
15gb|AC156827.4| Medicago truncatula clone mth2-15c17, complete se... 42 2.4
16emb|AL391194.13| Human DNA sequence from clone RP11-352G14 on ch... 42 2.4
17gb|AC151827.5| Mus musculus BAC clone RP24-453P17 from chromosom... 42 2.4
18gb|AC069018.17|AC069018 Mus musculus BAC MGS3-563C15 (Genome Sy... 42 2.4
19gb|AC166288.7| Mus musculus chromosome 3, clone RP23-464M10, com... 40 9.6
20gb|AC163672.4| Mus musculus BAC clone RP23-23B15 from chromosome... 40 9.6
21gb|AC105323.28| Mus musculus chromosome 3, clone RP23-424L10, co... 40 9.6
22gb|AC101715.8| Mus musculus chromosome 1, clone RP23-283P17, com... 40 9.6
23gb|AC105076.25| Mus musculus chromosome 3, clone RP23-258P2, com... 40 9.6
24gb|AC144630.2| Mus musculus BAC clone RP23-284O15 from chromosom... 40 9.6
25gb|AC154384.2| Mus musculus BAC clone RP23-39K21 from chromosome... 40 9.6
26gb|AC133211.3| Mus musculus BAC clone RP23-36M18 from chromosome... 40 9.6
27gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genom... 40 9.6
28gb|AC163613.5| Mus musculus BAC clone RP24-150N2 from chromosome... 40 9.6
29emb|AL590439.12| Human DNA sequence from clone RP11-394I23 on ch... 40 9.6
30emb|AL358133.11| Human DNA sequence from clone RP11-810I22 on ch... 40 9.6
31emb|AL137796.6| Human DNA sequence from clone RP5-1098D14 on chr... 40 9.6
32emb|CR380952.1| Candida glabrata strain CBS138 chromosome F comp... 40 9.6
33emb|AL645802.11| Mouse DNA sequence from clone RP23-128D9 on chr... 40 9.6
34emb|BX294162.23| Zebrafish DNA sequence from clone CH211-270C5 i... 40 9.6
35gb|AC147640.3| Mus musculus BAC clone RP23-131P20 from chromosom... 40 9.6
36emb|AL844596.5| Mouse DNA sequence from clone RP23-35J22 on chro... 40 9.6
37tpg|BK000655.1| TPA: TPA_exp: Takifugu rubripes otopetrin 1 (Oto... 40 9.6
38gb|AC021019.5|AC021019 Homo sapiens BAC clone RP11-496J3 from 6,... 40 9.6
39dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
40gb|AC022014.3|AC022014 Homo sapiens chromosome 11 clone RP11-91E... 40 9.6
41gb|AC026168.3|AC026168 Homo sapiens chromosome 11 clone RP11-156... 40 9.6
42gb|AC090453.4| Homo sapiens chromosome 8, clone RP11-380B11, com... 40 9.6
43emb|AL935311.10| Zebrafish DNA sequence from clone CH211-241N16,... 40 9.6
44emb|AL845349.13| Mouse DNA sequence from clone RP23-311F6 on chr... 40 9.6
45emb|AL732335.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 9.6
46dbj|AP006301.1| Homo sapiens genomic DNA, chromosome 8 clone:RP1... 40 9.6
47dbj|AP006215.1| Homo sapiens genomic DNA, chromosome 11, clone:R... 40 9.6
48emb|AL627212.21| Mouse DNA sequence from clone RP23-145E1 on chr... 40 9.6
49emb|AL606635.3|OSJN00057 Oryza sativa genomic DNA, chromosome 4,... 40 9.6
50gb|AC131797.3| Mus musculus BAC clone RP24-496C20 from 1, comple... 40 9.6
51emb|AL929336.12| Zebrafish DNA sequence from clone CH211-163J21,... 40 9.6
52dbj|AP004533.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 9.6
53gb|AC161214.4| Mus musculus chromosome 8, clone RP23-78A10, comp... 40 9.6
54gb|AC092818.4| Homo sapiens chromosome 8, clone RP11-419C23, com... 40 9.6
55dbj|AP000073.1| Homo sapiens genomic DNA, chromosome 8p11.2, sen... 40 9.6 
>dbj|AK059169.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E07, full
            insert sequence
          Length = 1396

 Score =  363 bits (183), Expect = 5e-97
 Identities = 319/363 (87%), Gaps = 1/363 (0%)
 Strand = Plus / Minus

                                                                        
Query: 325  tcctaggttgcttcaactgaaagtatctcaagctctgcccaccaaagcggagataatctc 384
            ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| | ||||
Sbjct: 1171 tcctaggttgcttcaaccgaaaggatctcaagctctgcccaccaaagtggagacagtctc 1112

                                                                        
Query: 385  ggcgttgctgcctccggtgaaatcgctagcacttcccttagtttagtggcgacctctctc 444
            |||||||||||||||||||| || ||||| ||||| || ||| |||||| |||||||| |
Sbjct: 1111 ggcgttgctgcctccggtgagattgctagaacttctctcagtctagtggtgacctctcgc 1052

                                                                        
Query: 445  atacttggtctcttttttggatcactttggatgcaatcctcaatcaactcacaaatggta 504
            || | ||||||||| || || || ||||||||||| ||||  || |||||||| ||| | 
Sbjct: 1051 atgcctggtctcttcttcgggtcgctttggatgcactcctggattaactcacagatgatt 992

                                                                        
Query: 505  tctagatcgttttctttgtgagtcgtcaaggtagggtcaagcaagcaggatatgctccgg 564
            ||||| |||||||||||||||||| |||||||||| |||||||| || |||||  |||||
Sbjct: 991  tctagctcgttttctttgtgagtcttcaaggtaggatcaagcaaacatgatatattccgg 932

                                                                        
Query: 565  tcatccttaatgcactccatagctaagttcgcaagagagccccgtgtgttcagaatatgg 624
            ||||| ||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||
Sbjct: 931  tcatctttaatgcactccatagccaagttcgcaagggag-cccttgtgttcagaatatgg 873

                                                                        
Query: 625  aggctttcccgatatgatttccagcatgagtagaccaaaactacatacattcccagctgg 684
            |||| |||| || ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 872  aggccttcctgagatgatttccagcatgagtagaccaaaactgcacacgttcccagctgg 813

               
Query: 685  atc 687
            |||
Sbjct: 812  atc 810
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>ref|NM_191995.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2007

 Score =  359 bits (181), Expect = 8e-96
 Identities = 317/361 (87%), Gaps = 1/361 (0%)
 Strand = Plus / Minus

                                                                        
Query: 327  ctaggttgcttcaactgaaagtatctcaagctctgcccaccaaagcggagataatctcgg 386
            ||||||||||||||| ||||| ||||||||||||||||||||||| ||||| | ||||||
Sbjct: 2007 ctaggttgcttcaaccgaaaggatctcaagctctgcccaccaaagtggagacagtctcgg 1948

                                                                        
Query: 387  cgttgctgcctccggtgaaatcgctagcacttcccttagtttagtggcgacctctctcat 446
            |||||||||||||||||| || ||||| ||||| || ||| |||||| |||||||| |||
Sbjct: 1947 cgttgctgcctccggtgagattgctagaacttctctcagtctagtggtgacctctcgcat 1888

                                                                        
Query: 447  acttggtctcttttttggatcactttggatgcaatcctcaatcaactcacaaatggtatc 506
             | ||||||||| || || || ||||||||||| ||||  || |||||||| ||| | ||
Sbjct: 1887 gcctggtctcttcttcgggtcgctttggatgcactcctggattaactcacagatgatttc 1828

                                                                        
Query: 507  tagatcgttttctttgtgagtcgtcaaggtagggtcaagcaagcaggatatgctccggtc 566
            ||| |||||||||||||||||| |||||||||| |||||||| || |||||  |||||||
Sbjct: 1827 tagctcgttttctttgtgagtcttcaaggtaggatcaagcaaacatgatatattccggtc 1768

                                                                        
Query: 567  atccttaatgcactccatagctaagttcgcaagagagccccgtgtgttcagaatatggag 626
            ||| ||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||
Sbjct: 1767 atctttaatgcactccatagccaagttcgcaagggag-cccttgtgttcagaatatggag 1709

                                                                        
Query: 627  gctttcccgatatgatttccagcatgagtagaccaaaactacatacattcccagctggat 686
            || |||| || ||||||||||||||||||||||||||||| || || |||||||||||||
Sbjct: 1708 gccttcctgagatgatttccagcatgagtagaccaaaactgcacacgttcccagctggat 1649

             
Query: 687  c 687
            |
Sbjct: 1648 c 1648
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  252 bits (127), Expect = 1e-63
 Identities = 229/263 (87%)
 Strand = Plus / Minus

                                                                            
Query: 325      tcctaggttgcttcaactgaaagtatctcaagctctgcccaccaaagcggagataatctc 384
                ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| | ||||
Sbjct: 27732752 tcctaggttgcttcaaccgaaaggatctcaagctctgcccaccaaagtggagacagtctc 27732693

                                                                            
Query: 385      ggcgttgctgcctccggtgaaatcgctagcacttcccttagtttagtggcgacctctctc 444
                |||||||||||||||||||| || ||||| ||||| || ||| |||||| |||||||| |
Sbjct: 27732692 ggcgttgctgcctccggtgagattgctagaacttctctcagtctagtggtgacctctcgc 27732633

                                                                            
Query: 445      atacttggtctcttttttggatcactttggatgcaatcctcaatcaactcacaaatggta 504
                || | ||||||||| || || || ||||||||||| ||||  || |||||||| ||| | 
Sbjct: 27732632 atgcctggtctcttcttcgggtcgctttggatgcactcctggattaactcacagatgatt 27732573

                                                                            
Query: 505      tctagatcgttttctttgtgagtcgtcaaggtagggtcaagcaagcaggatatgctccgg 564
                ||||| |||||||||||||||||| |||||||||| |||||||| || |||||  |||||
Sbjct: 27732572 tctagctcgttttctttgtgagtcttcaaggtaggatcaagcaaacatgatatattccgg 27732513

                                       
Query: 565      tcatccttaatgcactccatagc 587
                ||||| |||||||||||||||||
Sbjct: 27732512 tcatctttaatgcactccatagc 27732490



 Score =  117 bits (59), Expect = 5e-23
 Identities = 90/99 (90%), Gaps = 1/99 (1%)
 Strand = Plus / Minus

                                                                            
Query: 589      aagttcgcaagagagccccgtgtgttcagaatatggaggctttcccgatatgatttccag 648
                ||||||||||| ||||||  |||||||||||||||||||| |||| || |||||||||||
Sbjct: 27732378 aagttcgcaagggagccct-tgtgttcagaatatggaggccttcctgagatgatttccag 27732320

                                                       
Query: 649      catgagtagaccaaaactacatacattcccagctggatc 687
                |||||||||||||||||| || || ||||||||||||||
Sbjct: 27732319 catgagtagaccaaaactgcacacgttcccagctggatc 27732281



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                           
Query: 12       taaagaatatttctgtaaactccatggtacattacacaatcac 54
                |||||||||||||  ||||| ||||||||||||||||||||||
Sbjct: 27733055 taaagaatatttccttaaaccccatggtacattacacaatcac 27733013



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 76       ctctaggatgacctgaatcattcta 100
                ||||||||| |||||||||||||||
Sbjct: 27732981 ctctaggataacctgaatcattcta 27732957
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>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1117_G01
          Length = 125454

 Score =  252 bits (127), Expect = 1e-63
 Identities = 229/263 (87%)
 Strand = Plus / Minus

                                                                         
Query: 325   tcctaggttgcttcaactgaaagtatctcaagctctgcccaccaaagcggagataatctc 384
             ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| | ||||
Sbjct: 24807 tcctaggttgcttcaaccgaaaggatctcaagctctgcccaccaaagtggagacagtctc 24748

                                                                         
Query: 385   ggcgttgctgcctccggtgaaatcgctagcacttcccttagtttagtggcgacctctctc 444
             |||||||||||||||||||| || ||||| ||||| || ||| |||||| |||||||| |
Sbjct: 24747 ggcgttgctgcctccggtgagattgctagaacttctctcagtctagtggtgacctctcgc 24688

                                                                         
Query: 445   atacttggtctcttttttggatcactttggatgcaatcctcaatcaactcacaaatggta 504
             || | ||||||||| || || || ||||||||||| ||||  || |||||||| ||| | 
Sbjct: 24687 atgcctggtctcttcttcgggtcgctttggatgcactcctggattaactcacagatgatt 24628

                                                                         
Query: 505   tctagatcgttttctttgtgagtcgtcaaggtagggtcaagcaagcaggatatgctccgg 564
             ||||| |||||||||||||||||| |||||||||| |||||||| || |||||  |||||
Sbjct: 24627 tctagctcgttttctttgtgagtcttcaaggtaggatcaagcaaacatgatatattccgg 24568

                                    
Query: 565   tcatccttaatgcactccatagc 587
             ||||| |||||||||||||||||
Sbjct: 24567 tcatctttaatgcactccatagc 24545



 Score =  117 bits (59), Expect = 5e-23
 Identities = 90/99 (90%), Gaps = 1/99 (1%)
 Strand = Plus / Minus

                                                                         
Query: 589   aagttcgcaagagagccccgtgtgttcagaatatggaggctttcccgatatgatttccag 648
             ||||||||||| ||||||  |||||||||||||||||||| |||| || |||||||||||
Sbjct: 24433 aagttcgcaagggagccct-tgtgttcagaatatggaggccttcctgagatgatttccag 24375

                                                    
Query: 649   catgagtagaccaaaactacatacattcccagctggatc 687
             |||||||||||||||||| || || ||||||||||||||
Sbjct: 24374 catgagtagaccaaaactgcacacgttcccagctggatc 24336



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 12    taaagaatatttctgtaaactccatggtacattacacaatcac 54
             |||||||||||||  ||||| ||||||||||||||||||||||
Sbjct: 25110 taaagaatatttccttaaaccccatggtacattacacaatcac 25068



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 76    ctctaggatgacctgaatcattcta 100
             ||||||||| |||||||||||||||
Sbjct: 25036 ctctaggataacctgaatcattcta 25012
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>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0485G01
          Length = 167203

 Score =  252 bits (127), Expect = 1e-63
 Identities = 229/263 (87%)
 Strand = Plus / Minus

                                                                          
Query: 325    tcctaggttgcttcaactgaaagtatctcaagctctgcccaccaaagcggagataatctc 384
              ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| | ||||
Sbjct: 141318 tcctaggttgcttcaaccgaaaggatctcaagctctgcccaccaaagtggagacagtctc 141259

                                                                          
Query: 385    ggcgttgctgcctccggtgaaatcgctagcacttcccttagtttagtggcgacctctctc 444
              |||||||||||||||||||| || ||||| ||||| || ||| |||||| |||||||| |
Sbjct: 141258 ggcgttgctgcctccggtgagattgctagaacttctctcagtctagtggtgacctctcgc 141199

                                                                          
Query: 445    atacttggtctcttttttggatcactttggatgcaatcctcaatcaactcacaaatggta 504
              || | ||||||||| || || || ||||||||||| ||||  || |||||||| ||| | 
Sbjct: 141198 atgcctggtctcttcttcgggtcgctttggatgcactcctggattaactcacagatgatt 141139

                                                                          
Query: 505    tctagatcgttttctttgtgagtcgtcaaggtagggtcaagcaagcaggatatgctccgg 564
              ||||| |||||||||||||||||| |||||||||| |||||||| || |||||  |||||
Sbjct: 141138 tctagctcgttttctttgtgagtcttcaaggtaggatcaagcaaacatgatatattccgg 141079

                                     
Query: 565    tcatccttaatgcactccatagc 587
              ||||| |||||||||||||||||
Sbjct: 141078 tcatctttaatgcactccatagc 141056



 Score =  117 bits (59), Expect = 5e-23
 Identities = 90/99 (90%), Gaps = 1/99 (1%)
 Strand = Plus / Minus

                                                                          
Query: 589    aagttcgcaagagagccccgtgtgttcagaatatggaggctttcccgatatgatttccag 648
              ||||||||||| ||||||  |||||||||||||||||||| |||| || |||||||||||
Sbjct: 140944 aagttcgcaagggagccct-tgtgttcagaatatggaggccttcctgagatgatttccag 140886

                                                     
Query: 649    catgagtagaccaaaactacatacattcccagctggatc 687
              |||||||||||||||||| || || ||||||||||||||
Sbjct: 140885 catgagtagaccaaaactgcacacgttcccagctggatc 140847



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                         
Query: 12     taaagaatatttctgtaaactccatggtacattacacaatcac 54
              |||||||||||||  ||||| ||||||||||||||||||||||
Sbjct: 141621 taaagaatatttccttaaaccccatggtacattacacaatcac 141579



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 76     ctctaggatgacctgaatcattcta 100
              ||||||||| |||||||||||||||
Sbjct: 141547 ctctaggataacctgaatcattcta 141523
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>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06,
             complete sequence
          Length = 139139

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 361   gcccaccaaagcggagataatctcggcgttgctgcctccggtgaaatcgcta 412
             |||||||| |||||||| ||||| ||||||||||| ||||| ||||| ||||
Sbjct: 31051 gcccaccagagcggagacaatctgggcgttgctgcatccggcgaaatggcta 31102
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                    
Query: 361      gcccaccaaagcggagataatctcggcgttgctgcctccggtgaaatcgcta 412
                |||||||| |||||||| ||||| ||||||||||| ||||| ||||| ||||
Sbjct: 27666493 gcccaccagagcggagacaatctgggcgttgctgcatccggcgaaatggcta 27666544
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>dbj|AK065592.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027G15, full
            insert sequence
          Length = 1973

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 361  gcccaccaaagcggagataatctcggcgttgctgcctccggtgaaatcgcta 412
            |||||||| |||||||| ||||| ||||||||||| ||||| ||||| ||||
Sbjct: 1767 gcccaccagagcggagacaatctgggcgttgctgcatccggcgaaatggcta 1716
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>dbj|AK062165.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-B06, full
            insert sequence
          Length = 2243

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 361  gcccaccaaagcggagataatctcggcgttgctgcctccggtgaaatcgcta 412
            |||||||| |||||||| ||||| ||||||||||| ||||| ||||| ||||
Sbjct: 2037 gcccaccagagcggagacaatctgggcgttgctgcatccggcgaaatggcta 1986
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>ref|NM_123952.1| Arabidopsis thaliana ATP binding / protein kinase/ protein
            serine/threonine kinase/ protein-tyrosine kinase
            AT5G45840 mRNA, complete cds
          Length = 2007

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 349  atctcaagctctgcccaccaaagcggaga 377
            ||||||||||||||||||||||| |||||
Sbjct: 1985 atctcaagctctgcccaccaaagaggaga 1957
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>dbj|AB016870.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15I22
          Length = 59648

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 349   atctcaagctctgcccaccaaagcggaga 377
             ||||||||||||||||||||||| |||||
Sbjct: 11426 atctcaagctctgcccaccaaagaggaga 11454
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>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence
          Length = 984602

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 140    aactcaagaagaaacaagaatt 161
              ||||||||||||||||||||||
Sbjct: 215839 aactcaagaagaaacaagaatt 215860
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>gb|AC163622.4| Mus musculus BAC clone RP24-566G6 from chromosome y, complete sequence
          Length = 166756

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 148    aagaaacaagaattacccaga 168
              |||||||||||||||||||||
Sbjct: 133131 aagaaacaagaattacccaga 133151
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>gb|AC140187.3| Mus musculus BAC clone RP24-364N20 from chromosome Y, complete sequence
          Length = 151358

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 148    aagaaacaagaattacccaga 168
              |||||||||||||||||||||
Sbjct: 123540 aagaaacaagaattacccaga 123520
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>gb|AC156827.4| Medicago truncatula clone mth2-15c17, complete sequence
          Length = 110578

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                           
Query: 132    atagagaaaactcaagaagaaacaagaat 160
              ||||||||||| |||||||||||||||||
Sbjct: 102582 atagagaaaac-caagaagaaacaagaat 102555
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>emb|AL391194.13| Human DNA sequence from clone RP11-352G14 on chromosome 6 Contains
           the SLC17A4 gene for solute carrier family 17 (sodium
           phosphate) member 4 and the 3' end of the SLC17A1 gene
           for solute carrier family 17 (sodium phosphate) member
           1, complete sequence
          Length = 48243

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 242 caacaaagatgtacaaggttg 262
           |||||||||||||||||||||
Sbjct: 231 caacaaagatgtacaaggttg 251
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>gb|AC151827.5| Mus musculus BAC clone RP24-453P17 from chromosome y, complete sequence
          Length = 166980

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 148   aagaaacaagaattacccaga 168
             |||||||||||||||||||||
Sbjct: 36475 aagaaacaagaattacccaga 36495
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>gb|AC069018.17|AC069018 Mus musculus  BAC MGS3-563C15 (Genome Systems Mouse BAC Library)
             complete sequence
          Length = 157665

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 148   aagaaacaagaattacccaga 168
             |||||||||||||||||||||
Sbjct: 55894 aagaaacaagaattacccaga 55914
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>gb|AC166288.7| Mus musculus chromosome 3, clone RP23-464M10, complete sequence
          Length = 183724

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 575    tgcactccatagctaagttc 594
              ||||||||||||||||||||
Sbjct: 154655 tgcactccatagctaagttc 154636
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>gb|AC163672.4| Mus musculus BAC clone RP23-23B15 from chromosome 3, complete sequence
          Length = 190599

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   aaactcaagaagaaacaaga 158
             ||||||||||||||||||||
Sbjct: 99664 aaactcaagaagaaacaaga 99683
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>gb|AC105323.28| Mus musculus chromosome 3, clone RP23-424L10, complete sequence
          Length = 183897

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 575    tgcactccatagctaagttc 594
              ||||||||||||||||||||
Sbjct: 152367 tgcactccatagctaagttc 152386
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>gb|AC101715.8| Mus musculus chromosome 1, clone RP23-283P17, complete sequence
          Length = 148387

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    aaactcaagaagaaacaaga 158
              ||||||||||||||||||||
Sbjct: 121245 aaactcaagaagaaacaaga 121226
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>gb|AC105076.25| Mus musculus chromosome 3, clone RP23-258P2, complete sequence
          Length = 193458

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 462   tggatcactttggatgcaat 481
             ||||||||||||||||||||
Sbjct: 62141 tggatcactttggatgcaat 62160
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>gb|AC144630.2| Mus musculus BAC clone RP23-284O15 from chromosome 1, complete sequence
          Length = 188928

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    aaactcaagaagaaacaaga 158
              ||||||||||||||||||||
Sbjct: 138533 aaactcaagaagaaacaaga 138552
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>gb|AC154384.2| Mus musculus BAC clone RP23-39K21 from chromosome 14, complete sequence
          Length = 242114

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   aaactcaagaagaaacaaga 158
             ||||||||||||||||||||
Sbjct: 92427 aaactcaagaagaaacaaga 92408
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>gb|AC133211.3| Mus musculus BAC clone RP23-36M18 from chromosome 12, complete sequence
          Length = 238126

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    tttgaatttatggggcgggg 191
              ||||||||||||||||||||
Sbjct: 189993 tttgaatttatggggcgggg 190012
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>gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genomic sequence, complete
             sequence
          Length = 100975

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 133   tagagaaaactcaagaagaaacaa 156
             ||||| ||||||||||||||||||
Sbjct: 98046 tagagtaaactcaagaagaaacaa 98023
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>gb|AC163613.5| Mus musculus BAC clone RP24-150N2 from chromosome 1, complete sequence
          Length = 135256

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    aaactcaagaagaaacaaga 158
              ||||||||||||||||||||
Sbjct: 125634 aaactcaagaagaaacaaga 125615
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>emb|AL590439.12| Human DNA sequence from clone RP11-394I23 on chromosome 10 Contains a
              novel gene (FLJ13397) (CARP) and a CpG island, complete
              sequence
          Length = 192044

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 75     actctaggatgacctgaatcattc 98
              ||||||||||||||||| ||||||
Sbjct: 153695 actctaggatgacctgactcattc 153672
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>emb|AL358133.11| Human DNA sequence from clone RP11-810I22 on chromosome 6 Contains
            the 3' end of a novel gene (CD001, BM-021, FLJ11240),
            complete sequence
          Length = 91859

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  cttggtctcttttttggatcactt 471
            |||| |||||||||||||||||||
Sbjct: 7544 cttgctctcttttttggatcactt 7521
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>emb|AL137796.6| Human DNA sequence from clone RP5-1098D14 on chromosome 1 Contains STSs
             and GSSs, complete sequence
          Length = 87924

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   tagagaaaactcaagaagaa 152
             ||||||||||||||||||||
Sbjct: 42895 tagagaaaactcaagaagaa 42914
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>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence
          Length = 927101

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    cacaacatcaccatgtacgt 124
              ||||||||||||||||||||
Sbjct: 191151 cacaacatcaccatgtacgt 191132
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>emb|AL645802.11| Mouse DNA sequence from clone RP23-128D9 on chromosome 11 Contains the
             gene for olfactory receptor MOR275-2,  an olfactory
             receptor (MOR275-3) pseudogene, the gene for olfactory
             receptor MOR275-5, a novel gene (2210407C18Rik), the gene
             olfactory receptor MOR107-1, a novel gene (LOC216781), a
             novel olfactory receptor protein, a novel gene similar to
             olfactory receptor MOR285-1 (LOC216783),  a novel gene
             similar to olfactory receptor MOR285-2 (LOC216784), a
             novel gene similar to olfactory receptor MOR285-1
             (LOC194664), the gene for olfactory receptor MOR256-47 and
             a novel gene similar to olfactory receptor MOR285-1
             (LOC193147), complete sequence
          Length = 226520

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 531   caaggtagggtcaagcaagc 550
             ||||||||||||||||||||
Sbjct: 62921 caaggtagggtcaagcaagc 62902
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>emb|BX294162.23| Zebrafish DNA sequence from clone CH211-270C5 in linkage group 10,
              complete sequence
          Length = 150791

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 441    tctcatacttggtctcttttttgg 464
              |||||| |||||||||||||||||
Sbjct: 110155 tctcatgcttggtctcttttttgg 110178
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>gb|AC147640.3| Mus musculus BAC clone RP23-131P20 from chromosome 10, complete sequence
          Length = 217527

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    aaactcaagaagaaacaaga 158
              ||||||||||||||||||||
Sbjct: 195497 aaactcaagaagaaacaaga 195478
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>emb|AL844596.5| Mouse DNA sequence from clone RP23-35J22 on chromosome 2, complete
             sequence
          Length = 128775

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   atatagagaaaactcaagaa 149
             ||||||||||||||||||||
Sbjct: 72195 atatagagaaaactcaagaa 72176
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>tpg|BK000655.1| TPA: TPA_exp: Takifugu rubripes otopetrin 1 (Otop1) gene, complete
           cds
          Length = 3810

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 231 gcagaaactcgcaacaaaga 250
           ||||||||||||||||||||
Sbjct: 832 gcagaaactcgcaacaaaga 813
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>gb|AC021019.5|AC021019 Homo sapiens BAC clone RP11-496J3 from 6, complete sequence
          Length = 220216

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 448   cttggtctcttttttggatcactt 471
             |||| |||||||||||||||||||
Sbjct: 20549 cttgctctcttttttggatcactt 20526
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 107      caacatcaccatgtacgttc 126
                ||||||||||||||||||||
Sbjct: 33091087 caacatcaccatgtacgttc 33091068
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>gb|AC022014.3|AC022014 Homo sapiens chromosome 11 clone RP11-91E22 map 11q, complete sequence
          Length = 161192

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   acccagaatttttgaattta 181
             ||||||||||||||||||||
Sbjct: 50660 acccagaatttttgaattta 50641
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>gb|AC026168.3|AC026168 Homo sapiens chromosome 11 clone RP11-156E23 map 11q, complete sequence
          Length = 180508

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    acccagaatttttgaattta 181
              ||||||||||||||||||||
Sbjct: 116475 acccagaatttttgaattta 116494
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>gb|AC090453.4| Homo sapiens chromosome 8, clone RP11-380B11, complete sequence
          Length = 166452

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 608   gtgtgttcagaatatggagg 627
             ||||||||||||||||||||
Sbjct: 16602 gtgtgttcagaatatggagg 16583
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>emb|AL935311.10| Zebrafish DNA sequence from clone CH211-241N16, complete sequence
          Length = 162121

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 441  tctcatacttggtctcttttttgg 464
            |||||| |||||||||||||||||
Sbjct: 1005 tctcatgcttggtctcttttttgg 982
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>emb|AL845349.13| Mouse DNA sequence from clone RP23-311F6 on chromosome 2, complete
             sequence
          Length = 180824

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   aaactcaagaagaaacaaga 158
             ||||||||||||||||||||
Sbjct: 35324 aaactcaagaagaaacaaga 35305
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>emb|AL732335.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0721B11, complete
             sequence
          Length = 43586

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   caacatcaccatgtacgttc 126
             ||||||||||||||||||||
Sbjct: 16577 caacatcaccatgtacgttc 16558
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>dbj|AP006301.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-139F6, complete
             sequence
          Length = 163604

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 608   gtgtgttcagaatatggagg 627
             ||||||||||||||||||||
Sbjct: 82251 gtgtgttcagaatatggagg 82270
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>dbj|AP006215.1| Homo sapiens genomic DNA, chromosome 11, clone:RP11-729P6, complete
            sequence
          Length = 189310

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  acccagaatttttgaattta 181
            ||||||||||||||||||||
Sbjct: 9685 acccagaatttttgaattta 9666
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>emb|AL627212.21| Mouse DNA sequence from clone RP23-145E1 on chromosome 4, complete
             sequence
          Length = 207362

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   ggggcgggggaggaggtagc 202
             ||||||||||||||||||||
Sbjct: 71648 ggggcgggggaggaggtagc 71667
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>emb|AL606635.3|OSJN00057 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010D21,
              complete sequence
          Length = 140626

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    caacatcaccatgtacgttc 126
              ||||||||||||||||||||
Sbjct: 100668 caacatcaccatgtacgttc 100649
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>gb|AC131797.3| Mus musculus BAC clone RP24-496C20 from 1, complete sequence
          Length = 139995

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   aaactcaagaagaaacaaga 158
             ||||||||||||||||||||
Sbjct: 69287 aaactcaagaagaaacaaga 69306
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>emb|AL929336.12| Zebrafish DNA sequence from clone CH211-163J21, complete sequence
          Length = 156284

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   gaaaactcaagaagaaacaa 156
             ||||||||||||||||||||
Sbjct: 89123 gaaaactcaagaagaaacaa 89104
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>dbj|AP004533.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT14G02, TM0080,
             complete sequence
          Length = 76730

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 283   ctcagtgttgcagcaagaaccata 306
             ||||||||||||||||| ||||||
Sbjct: 27584 ctcagtgttgcagcaagcaccata 27607
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>gb|AC161214.4| Mus musculus chromosome 8, clone RP23-78A10, complete sequence
          Length = 182742

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   aaactcaagaagaaacaaga 158
             ||||||||||||||||||||
Sbjct: 35957 aaactcaagaagaaacaaga 35938
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>gb|AC092818.4| Homo sapiens chromosome 8, clone RP11-419C23, complete sequence
          Length = 175100

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 608    gtgtgttcagaatatggagg 627
              ||||||||||||||||||||
Sbjct: 134496 gtgtgttcagaatatggagg 134477
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>dbj|AP000073.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region,
             section 9/19, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 608   gtgtgttcagaatatggagg 627
             ||||||||||||||||||||
Sbjct: 37829 gtgtgttcagaatatggagg 37810


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,160,342
Number of Sequences: 3902068
Number of extensions: 6160342
Number of successful extensions: 154946
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 154607
Number of HSP's gapped (non-prelim): 335
length of query: 698
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 675
effective length of database: 17,143,297,704
effective search space: 11571725950200
effective search space used: 11571725950200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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