ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags5c17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009374.1| Triticum aestivum clone wlm96.pk029.g10:fis, full... 60 6e-07
2emb|BX537139.17| Zebrafish DNA sequence from clone DKEY-46K9 in ... 42 0.15
3ref|XM_452435.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C05258g ... 38 2.3
4gb|AC136712.9| Mus musculus chromosome 3, clone RP23-36H15, comp... 38 2.3
5emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 38 2.3
6gb|AC183493.1| Brassica oleracea Contig B, complete sequence 38 2.3
7gb|AC106799.3| Homo sapiens chromosome 5 clone RP11-445O3, compl... 38 2.3
8gb|AC016598.5|AC016598 Homo sapiens chromosome 5 clone CTD-2050E... 38 2.3
9dbj|AP001578.3| Homo sapiens genomic DNA, chromosome 6q25.2, clo... 38 2.3
10gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome... 36 9.1
11gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome... 36 9.1
12ref|NM_016383.3| Homo sapiens leucine zipper protein 4 (LUZP4), ... 36 9.1
13gb|AC090972.5| Canis familiaris clone RP81-391L22, complete sequ... 36 9.1
14gb|AC087252.3| Papio anubis clone RP41-265N24, complete sequence 36 9.1
15gb|AC121808.2| Mus musculus BAC clone RP23-449M23 from 13, compl... 36 9.1
16gb|AC122002.2| Mus musculus BAC clone RP24-335H15 from 7, comple... 36 9.1
17gb|AC114987.10| Mus musculus chromosome 3, clone RP23-81D7, comp... 36 9.1
18emb|AL445650.9| Human DNA sequence from clone RP11-152K20 on chr... 36 9.1
19emb|AL354951.7| Human DNA sequence from clone RP11-451M19 on chr... 36 9.1
20emb|AL109751.19|HSJ237H22 Human DNA sequence from clone RP1-237H... 36 9.1
21emb|AL732484.13| Mouse DNA sequence from clone RP23-37B7 on chro... 36 9.1
22emb|X64346.1|HSGEND Saimiriine herpesvirus 2 complete genome 36 9.1
23gb|AC153894.8| Mus musculus 6 BAC RP23-118E20 (Roswell Park Canc... 36 9.1
24emb|AL445065.1|TACID3 Thermoplasma acidophilum complete genome; ... 36 9.1
25gb|AC100322.8| Mus musculus chromosome 7, clone RP23-124O24, com... 36 9.1
26emb|AJ410493.1|SHE410493 Saimiriine herpesvirus 2 complete L-DNA... 36 9.1
27gb|AC129107.1| Homo sapiens 3 BAC RP11-627D9 (Roswell Park Cance... 36 9.1
28gb|AC112774.7| Homo sapiens 3 BAC RP11-804J11 (Roswell Park Canc... 36 9.1
29gb|DP000005.1| Macaca mulatta target 1 genomic scaffold 36 9.1
30dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 36 9.1
31dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 36 9.1
32gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold 36 9.1
33gb|AC140937.1| Gallus gallus chromosome UNK clone TAM32-30E15, c... 36 9.1
34gb|AC092442.5| Homo sapiens BAC clone RP11-488I16 from 4, comple... 36 9.1
35gb|AC124159.3| Macaca mulatta clone CH250-392A16, complete sequence 36 9.1
36gb|AC140397.2| Mus musculus BAC clone RP23-162E7 from chromosome... 36 9.1
37dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic D... 36 9.1
38dbj|AP005836.3| Oryza sativa (japonica cultivar-group) genomic D... 36 9.1
39dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic D... 36 9.1
40dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic D... 36 9.1
41emb|BX571732.6| Zebrafish DNA sequence from clone DKEY-49H7 in l... 36 9.1
42dbj|AP005566.3| Oryza sativa (japonica cultivar-group) genomic D... 36 9.1
43dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic D... 36 9.1
44dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic D... 36 9.1
45emb|AL935049.19| Zebrafish DNA sequence from clone CH211-185K2 i... 36 9.1
46emb|AL928716.15| Zebrafish DNA sequence from clone DKEY-23K6 in ... 36 9.1
47emb|BX294130.5| Zebrafish DNA sequence from clone DKEY-263O22 in... 36 9.1
48gb|AC171179.2| Gallus gallus BAC clone CH261-31A13 from chromoso... 36 9.1
49gb|AC154013.4| Mus musculus 6 BAC RP24-124B23 (Roswell Park Canc... 36 9.1
50gb|AC132149.4| Mus musculus BAC clone RP23-10H23 from 3, complet... 36 9.1
51gb|AC165378.3| Colobus guereza clone CH272-371N6, complete sequence 36 9.1
52gb|AC139111.3| Cercopithecus aethiops clone CH252-256L19, comple... 36 9.1
53gb|M86409.1|HSV3PRGEN Herpesvirus saimiri the most three prime e... 36 9.1
54gb|AF124430.1| Homo sapiens HOM-TES-85 tumor antigen mRNA, compl... 36 9.1 
>gb|BT009374.1| Triticum aestivum clone wlm96.pk029.g10:fis, full insert mRNA
            sequence
          Length = 1635

 Score = 60.0 bits (30), Expect = 6e-07
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 1    tccccttcgcatgataaaaaaccatccatggctaaaaaataaggccatgt 50
            |||||||||||||||||||||| |||||||||  |||||||  |||||||
Sbjct: 1226 tccccttcgcatgataaaaaactatccatggccgaaaaatattgccatgt 1177
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>emb|BX537139.17| Zebrafish DNA sequence from clone DKEY-46K9 in linkage group 9, complete
              sequence
          Length = 243063

 Score = 42.1 bits (21), Expect = 0.15
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 5      cttcgcatgataaaaaaccatccat 29
              ||||||||||||||||| |||||||
Sbjct: 206585 cttcgcatgataaaaaaacatccat 206561
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>ref|XM_452435.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C05258g predicted mRNA
          Length = 4068

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    tccccttcgcatgataaaa 19
            |||||||||||||||||||
Sbjct: 1720 tccccttcgcatgataaaa 1738
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>gb|AC136712.9| Mus musculus chromosome 3, clone RP23-36H15, complete sequence
          Length = 201139

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 33     taaaaaataaggccatgtt 51
              |||||||||||||||||||
Sbjct: 151329 taaaaaataaggccatgtt 151311
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>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1753957

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      tccccttcgcatgataaaa 19
              |||||||||||||||||||
Sbjct: 473219 tccccttcgcatgataaaa 473237
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>gb|AC183493.1| Brassica oleracea Contig B, complete sequence
          Length = 284024

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 16    aaaaaaccatccatggcta 34
             |||||||||||||||||||
Sbjct: 73383 aaaaaaccatccatggcta 73401
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>gb|AC106799.3| Homo sapiens chromosome 5 clone RP11-445O3, complete sequence
          Length = 176095

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 14     ataaaaaaccatccatggc 32
              |||||||||||||||||||
Sbjct: 123158 ataaaaaaccatccatggc 123140
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>gb|AC016598.5|AC016598 Homo sapiens chromosome 5 clone CTD-2050E21, complete sequence
          Length = 159866

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 20     aaccatccatggctaaaaaataa 42
              |||||| ||||||||||||||||
Sbjct: 125569 aaccatacatggctaaaaaataa 125591
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>dbj|AP001578.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB1954F7
          Length = 239057

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 33     taaaaaataaggccatgtt 51
              |||||||||||||||||||
Sbjct: 119307 taaaaaataaggccatgtt 119289
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>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08,
             complete sequence
          Length = 132017

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 34    aaaaaataaggccatgtt 51
             ||||||||||||||||||
Sbjct: 80902 aaaaaataaggccatgtt 80919
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>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0084P24, complete sequence
          Length = 148784

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 34    aaaaaataaggccatgtt 51
             ||||||||||||||||||
Sbjct: 30513 aaaaaataaggccatgtt 30530
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>ref|NM_016383.3| Homo sapiens leucine zipper protein 4 (LUZP4), mRNA
          Length = 1745

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 10  catgataaaaaaccatcc 27
           ||||||||||||||||||
Sbjct: 296 catgataaaaaaccatcc 313
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>gb|AC090972.5| Canis familiaris clone RP81-391L22, complete sequence
          Length = 197944

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 22    ccatccatggctaaaaaa 39
             ||||||||||||||||||
Sbjct: 84988 ccatccatggctaaaaaa 84971
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>gb|AC087252.3| Papio anubis clone RP41-265N24, complete sequence
          Length = 179525

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 14     ataaaaaaccatccatgg 31
              ||||||||||||||||||
Sbjct: 106550 ataaaaaaccatccatgg 106567
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>gb|AC121808.2| Mus musculus BAC clone RP23-449M23 from 13, complete sequence
          Length = 194020

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 24     atccatggctaaaaaata 41
              ||||||||||||||||||
Sbjct: 105829 atccatggctaaaaaata 105846
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>gb|AC122002.2| Mus musculus BAC clone RP24-335H15 from 7, complete sequence
          Length = 114070

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 26     ccatggctaaaaaataag 43
              ||||||||||||||||||
Sbjct: 109667 ccatggctaaaaaataag 109684
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>gb|AC114987.10| Mus musculus chromosome 3, clone RP23-81D7, complete sequence
          Length = 179717

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 19    aaaccatccatggctaaa 36
             ||||||||||||||||||
Sbjct: 35907 aaaccatccatggctaaa 35890
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>emb|AL445650.9| Human DNA sequence from clone RP11-152K20 on chromosome 1 Contains the
             5' end of the USH2A gene for Usher syndrome 2A (autosomal
             recessive, mild) and the 3' end of the ESRRG gene for
             estrogen-related receptor gamma, complete sequence
          Length = 153705

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 26    ccatggctaaaaaataag 43
             ||||||||||||||||||
Sbjct: 16716 ccatggctaaaaaataag 16699
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>emb|AL354951.7| Human DNA sequence from clone RP11-451M19 on chromosome 10 Contains a
              ribosomal protein L21 (RPL21) pseudogene, the XPNPEP1 gene
              for X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
              (SAMP, XPNPEP, XPNPEPL), a novel gene and one CpG island,
              complete sequence
          Length = 205329

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 34     aaaaaataaggccatgtt 51
              ||||||||||||||||||
Sbjct: 141094 aaaaaataaggccatgtt 141077
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>emb|AL109751.19|HSJ237H22 Human DNA sequence from clone RP1-237H22 on chromosome Xq23-24 Contains
             the gene for HOM-TES-85 tumor antigen and a CpG island,
             complete sequence
          Length = 102751

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 10    catgataaaaaaccatcc 27
             ||||||||||||||||||
Sbjct: 47516 catgataaaaaaccatcc 47533
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>emb|AL732484.13| Mouse DNA sequence from clone RP23-37B7 on chromosome 2, complete
             sequence
          Length = 201265

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 17    aaaaaccatccatggctaaaaa 38
             |||||||||||| |||||||||
Sbjct: 72121 aaaaaccatccaaggctaaaaa 72142
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>emb|X64346.1|HSGEND Saimiriine herpesvirus 2 complete genome
          Length = 112930

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 32    ctaaaaaataaggccatg 49
             ||||||||||||||||||
Sbjct: 98134 ctaaaaaataaggccatg 98151
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>gb|AC153894.8| Mus musculus 6 BAC RP23-118E20 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 216116

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 34    aaaaaataaggccatgtt 51
             ||||||||||||||||||
Sbjct: 38682 aaaaaataaggccatgtt 38699
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>emb|AL445065.1|TACID3 Thermoplasma acidophilum complete genome; segment 3/5
          Length = 316900

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 5      cttcgcatgataaaaaac 22
              ||||||||||||||||||
Sbjct: 290593 cttcgcatgataaaaaac 290610
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>gb|AC100322.8| Mus musculus chromosome 7, clone RP23-124O24, complete sequence
          Length = 219314

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 26     ccatggctaaaaaataag 43
              ||||||||||||||||||
Sbjct: 150481 ccatggctaaaaaataag 150464
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>emb|AJ410493.1|SHE410493 Saimiriine herpesvirus 2 complete L-DNA sequence, strain C488
          Length = 113027

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 32    ctaaaaaataaggccatg 49
             ||||||||||||||||||
Sbjct: 97981 ctaaaaaataaggccatg 97998
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>gb|AC129107.1| Homo sapiens 3 BAC RP11-627D9 (Roswell Park Cancer Institute Human
           BAC Library) complete sequence
          Length = 16817

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 19  aaaccatccatggctaaa 36
           ||||||||||||||||||
Sbjct: 506 aaaccatccatggctaaa 489
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>gb|AC112774.7| Homo sapiens 3 BAC RP11-804J11 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 9610

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 19   aaaccatccatggctaaa 36
            ||||||||||||||||||
Sbjct: 1499 aaaccatccatggctaaa 1516
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>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold
          Length = 1678549

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 14     ataaaaaaccatccatgg 31
              ||||||||||||||||||
Sbjct: 850348 ataaaaaaccatccatgg 850365
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 34       aaaaaataaggccatgtt 51
                ||||||||||||||||||
Sbjct: 12867944 aaaaaataaggccatgtt 12867961



 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 34       aaaaaataaggccatgtt 51
                ||||||||||||||||||
Sbjct: 11566163 aaaaaataaggccatgtt 11566146



 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 34       aaaaaataaggccatgtt 51
                ||||||||||||||||||
Sbjct: 10057534 aaaaaataaggccatgtt 10057517



 Score = 36.2 bits (18), Expect = 9.1
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 25      tccatggctaaaaaataaggcc 46
               |||||| |||||||||||||||
Sbjct: 7007622 tccatgactaaaaaataaggcc 7007601
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 34       aaaaaataaggccatgtt 51
                ||||||||||||||||||
Sbjct: 20192241 aaaaaataaggccatgtt 20192258
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>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold
          Length = 1825024

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 14     ataaaaaaccatccatgg 31
              ||||||||||||||||||
Sbjct: 872639 ataaaaaaccatccatgg 872656
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>gb|AC140937.1| Gallus gallus chromosome UNK clone TAM32-30E15, complete sequence
          Length = 99650

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 34    aaaaaataaggccatgtt 51
             ||||||||||||||||||
Sbjct: 56462 aaaaaataaggccatgtt 56479
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>gb|AC092442.5| Homo sapiens BAC clone RP11-488I16 from 4, complete sequence
          Length = 160193

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 34    aaaaaataaggccatgtt 51
             ||||||||||||||||||
Sbjct: 18846 aaaaaataaggccatgtt 18829
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>gb|AC124159.3| Macaca mulatta clone CH250-392A16, complete sequence
          Length = 131429

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 14    ataaaaaaccatccatgg 31
             ||||||||||||||||||
Sbjct: 42877 ataaaaaaccatccatgg 42894
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>gb|AC140397.2| Mus musculus BAC clone RP23-162E7 from chromosome 13, complete sequence
          Length = 233829

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 24     atccatggctaaaaaata 41
              ||||||||||||||||||
Sbjct: 135932 atccatggctaaaaaata 135915
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>dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0044K01
          Length = 160643

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 25    tccatggctaaaaaataaggcc 46
             |||||| |||||||||||||||
Sbjct: 78793 tccatgactaaaaaataaggcc 78772
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>dbj|AP005836.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0013F08
          Length = 166989

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 34    aaaaaataaggccatgtt 51
             ||||||||||||||||||
Sbjct: 82170 aaaaaataaggccatgtt 82153
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>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
           PAC clone:P0711F01
          Length = 193091

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 34  aaaaaataaggccatgtt 51
           ||||||||||||||||||
Sbjct: 797 aaaaaataaggccatgtt 780
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>dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0466E03
          Length = 138343

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 34    aaaaaataaggccatgtt 51
             ||||||||||||||||||
Sbjct: 86838 aaaaaataaggccatgtt 86821
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>emb|BX571732.6| Zebrafish DNA sequence from clone DKEY-49H7 in linkage group 20,
             complete sequence
          Length = 87077

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 4     ccttcgcatgataaaaaa 21
             ||||||||||||||||||
Sbjct: 15088 ccttcgcatgataaaaaa 15105
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>dbj|AP005566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1253_E02
          Length = 166645

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 34    aaaaaataaggccatgtt 51
             ||||||||||||||||||
Sbjct: 17212 aaaaaataaggccatgtt 17195
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>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0027G10
          Length = 184759

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 34     aaaaaataaggccatgtt 51
              ||||||||||||||||||
Sbjct: 175721 aaaaaataaggccatgtt 175738
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>dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0505H05
          Length = 152845

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 34    aaaaaataaggccatgtt 51
             ||||||||||||||||||
Sbjct: 29928 aaaaaataaggccatgtt 29945
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>emb|AL935049.19| Zebrafish DNA sequence from clone CH211-185K2 in linkage group 20,
             complete sequence
          Length = 148715

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 4     ccttcgcatgataaaaaa 21
             ||||||||||||||||||
Sbjct: 76367 ccttcgcatgataaaaaa 76350
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>emb|AL928716.15| Zebrafish DNA sequence from clone DKEY-23K6 in linkage group 20, complete
              sequence
          Length = 246647

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 4      ccttcgcatgataaaaaa 21
              ||||||||||||||||||
Sbjct: 136246 ccttcgcatgataaaaaa 136263
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>emb|BX294130.5| Zebrafish DNA sequence from clone DKEY-263O22 in linkage group 19,
             complete sequence
          Length = 205973

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 34    aaaaaataaggccatgtt 51
             ||||||||||||||||||
Sbjct: 75307 aaaaaataaggccatgtt 75290
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>gb|AC171179.2| Gallus gallus BAC clone CH261-31A13 from chromosome ul, complete sequence
          Length = 247380

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 22     ccatccatggctaaaaaa 39
              ||||||||||||||||||
Sbjct: 180722 ccatccatggctaaaaaa 180705
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>gb|AC154013.4| Mus musculus 6 BAC RP24-124B23 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 151057

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 34    aaaaaataaggccatgtt 51
             ||||||||||||||||||
Sbjct: 62179 aaaaaataaggccatgtt 62196
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>gb|AC132149.4| Mus musculus BAC clone RP23-10H23 from 3, complete sequence
          Length = 217329

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 19    aaaccatccatggctaaa 36
             ||||||||||||||||||
Sbjct: 31073 aaaccatccatggctaaa 31090
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>gb|AC165378.3| Colobus guereza clone CH272-371N6, complete sequence
          Length = 202455

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 14    ataaaaaaccatccatgg 31
             ||||||||||||||||||
Sbjct: 64817 ataaaaaaccatccatgg 64834
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>gb|AC139111.3| Cercopithecus aethiops clone CH252-256L19, complete sequence
          Length = 184042

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 14    ataaaaaaccatccatgg 31
             ||||||||||||||||||
Sbjct: 64579 ataaaaaaccatccatgg 64596
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>gb|M86409.1|HSV3PRGEN Herpesvirus saimiri the most three prime end of the genome
          Length = 43658

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 32    ctaaaaaataaggccatg 49
             ||||||||||||||||||
Sbjct: 28827 ctaaaaaataaggccatg 28844
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>gb|AF124430.1| Homo sapiens HOM-TES-85 tumor antigen mRNA, complete cds
          Length = 1727

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 10  catgataaaaaaccatcc 27
           ||||||||||||||||||
Sbjct: 275 catgataaaaaaccatcc 292


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 633,553
Number of Sequences: 3902068
Number of extensions: 633553
Number of successful extensions: 32258
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32132
Number of HSP's gapped (non-prelim): 126
length of query: 62
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 41
effective length of database: 17,151,101,840
effective search space: 703195175440
effective search space used: 703195175440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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