>gb|BT018784.1| Zea mays clone EL01N0527D07.d mRNA sequence
          Length = 2082

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 75/84 (89%), Gaps = 1/84 (1%)
 Strand = Plus / Minus

                                                                        
Query: 463  ggcggggtctgtggttttggcgctggccttggtttggtcatgatgggtttgcagaacctg 522
            ||||| |||||||| || || |||||| ||||||| |||||||| |||||||||||||||
Sbjct: 1642 ggcggagtctgtggcttcggagctggctttggtttagtcatgatcggtttgcagaacctg 1583

                                    
Query: 523  tcaagtgccttcagccttcttctt 546
            ||||||| ||||||| ||||||||
Sbjct: 1582 tcaagtg-cttcagctttcttctt 1560

>gb|AY108406.1| Zea mays PCO080983 mRNA sequence
          Length = 1289

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 75/84 (89%), Gaps = 1/84 (1%)
 Strand = Plus / Minus

                                                                       
Query: 463 ggcggggtctgtggttttggcgctggccttggtttggtcatgatgggtttgcagaacctg 522
           ||||| |||||||| || || |||||| ||||||| |||||||| |||||||||||||||
Sbjct: 820 ggcggagtctgtggcttcggagctggctttggtttagtcatgatcggtttgcagaacctg 761

                                   
Query: 523 tcaagtgccttcagccttcttctt 546
           ||||||| ||||||| ||||||||
Sbjct: 760 tcaagtg-cttcagctttcttctt 738

>gb|AY103680.1| Zea mays PCO080984 mRNA sequence
          Length = 1931

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 99/120 (82%), Gaps = 1/120 (0%)
 Strand = Plus / Minus

                                                                        
Query: 463  ggcggggtctgtggttttggcgctggccttggtttggtcatgatgggtttgcagaacctg 522
            ||||| ||||| || || || |||||| | ||||| |||||||| || ||||||||||| 
Sbjct: 1484 ggcggagtctgcggcttaggagctggcttcggtttcgtcatgatcggcttgcagaaccta 1425

                                                                        
Query: 523  tcaagtgccttcagccttcttctttatgtcagaaacaaggaggacaggattagcatgctt 582
            |||||||  |||||| |||||||| | ||||| | ||||||| || | ||||||||||||
Sbjct: 1424 tcaagtg-tttcagctttcttcttaaggtcagcagcaaggagtaccgaattagcatgctt 1366

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 58/66 (87%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                           
Query: 517     aacctgtcaagtgccttcagccttcttctttatgtcagaaacaaggaggacaggattagc 576
               |||||||||||||| |||||| |||||||| |||||||| |  | ||||||||||| |||
Sbjct: 4825148 aacctgtcaagtgc-ttcagctttcttcttcatgtcagatattaagaggacaggatcagc 4825090

                     
Query: 577     atgctt 582
               ||||||
Sbjct: 4825089 atgctt 4825084

>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
             complete sequence
          Length = 187956

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 58/66 (87%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                         
Query: 517   aacctgtcaagtgccttcagccttcttctttatgtcagaaacaaggaggacaggattagc 576
             |||||||||||||| |||||| |||||||| |||||||| |  | ||||||||||| |||
Sbjct: 97556 aacctgtcaagtgc-ttcagctttcttcttcatgtcagatattaagaggacaggatcagc 97498

                   
Query: 577   atgctt 582
             ||||||
Sbjct: 97497 atgctt 97492

>dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113E02, full
            insert sequence
          Length = 3137

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 57/65 (87%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                        
Query: 518  acctgtcaagtgccttcagccttcttctttatgtcagaaacaaggaggacaggattagca 577
            ||||||||||||| |||||| |||||||| |||||||| |  | ||||||||||| ||||
Sbjct: 2503 acctgtcaagtgc-ttcagctttcttcttcatgtcagatattaagaggacaggatcagca 2445

                 
Query: 578  tgctt 582
            |||||
Sbjct: 2444 tgctt 2440

>ref|NM_189556.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3139

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 66/79 (83%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                        
Query: 508  ggtttgcagaacctgtcaagtgccttcagccttcttctttatgtcagaaacaaggaggac 567
            |||||||||||||||||||  |  ||| ||||| |||||||  ||||||   || |||||
Sbjct: 2547 ggtttgcagaacctgtcaaccgt-ttcggcctttttctttaaatcagaagagagtaggac 2489

                               
Query: 568  aggattagcatgcttcggc 586
            ||| |||||||||||||||
Sbjct: 2488 agggttagcatgcttcggc 2470

>dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113C17, full
            insert sequence
          Length = 3139

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 66/79 (83%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                        
Query: 508  ggtttgcagaacctgtcaagtgccttcagccttcttctttatgtcagaaacaaggaggac 567
            |||||||||||||||||||  |  ||| ||||| |||||||  ||||||   || |||||
Sbjct: 2547 ggtttgcagaacctgtcaaccgt-ttcggcctttttctttaaatcagaagagagtaggac 2489

                               
Query: 568  aggattagcatgcttcggc 586
            ||| |||||||||||||||
Sbjct: 2488 agggttagcatgcttcggc 2470

>dbj|AK061691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C02, full
           insert sequence
          Length = 1144

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 66/79 (83%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                       
Query: 508 ggtttgcagaacctgtcaagtgccttcagccttcttctttatgtcagaaacaaggaggac 567
           |||||||||||||||||||  |  ||| ||||| |||||||  ||||||   || |||||
Sbjct: 617 ggtttgcagaacctgtcaaccgt-ttcggcctttttctttaaatcagaagagagtaggac 559

                              
Query: 568 aggattagcatgcttcggc 586
           ||| |||||||||||||||
Sbjct: 558 agggttagcatgcttcggc 540

>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence
          Length = 1207381

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 534    cagccttcttctttatgtcag 554
              |||||||||||||||||||||
Sbjct: 530338 cagccttcttctttatgtcag 530318

>gb|AC116329.3| Mus musculus BAC clone RP24-290C19 from 5, complete sequence
          Length = 170072

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 26    ccgtagataaaaattacaacg 46
             |||||||||||||||||||||
Sbjct: 86431 ccgtagataaaaattacaacg 86411

>emb|AL356952.18| Human DNA sequence from clone RP11-809M12 on chromosome 10 Contains a
             novel gene and a CpG island, complete sequence
          Length = 129950

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 173   aaacactgcagaaactctcca 193
             |||||||||||||||||||||
Sbjct: 94033 aaacactgcagaaactctcca 94053

>emb|AL138997.18| Human DNA sequence from clone RP11-10O23 on chromosome 13 Contains a
              hepatocyte nuclear factor 4 alpha (HNF4A) pseudogene,
              complete sequence
          Length = 172342

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 173    aaacactgcagaaactctcca 193
              |||||||||||||||||||||
Sbjct: 159807 aaacactgcagaaactctcca 159787

>gb|AC091042.6| Homo sapiens chromosome 18, clone RP11-563H6, complete sequence
          Length = 149173

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 539   ttcttctttatgtcagaaaca 559
             |||||||||||||||||||||
Sbjct: 89809 ttcttctttatgtcagaaaca 89829

>emb|CR390310.1| Gallus gallus finished cDNA, clone ChEST234p17
          Length = 1645

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 217 gtatgaaaacagccattcctt 237
           |||||||||||||||||||||
Sbjct: 495 gtatgaaaacagccattcctt 475

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 292      tctcctcagatcgacacctct 312
                |||||||||||||||||||||
Sbjct: 23968123 tctcctcagatcgacacctct 23968143



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 292     tctcctcagatcgacacctct 312
               |||||||||||||||||||||
Sbjct: 6273780 tctcctcagatcgacacctct 6273760

>gb|AE009707.1| Brucella melitensis 16M chromosome II, section 69 of 107 of the
            complete sequence
          Length = 9807

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 534  cagccttcttctttatgtcag 554
            |||||||||||||||||||||
Sbjct: 1371 cagccttcttctttatgtcag 1391

>dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1267_F10
          Length = 162669

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 292   tctcctcagatcgacacctct 312
             |||||||||||||||||||||
Sbjct: 71167 tctcctcagatcgacacctct 71147

>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence
          Length = 1162204

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 534    cagccttcttctttatgtcag 554
              |||||||||||||||||||||
Sbjct: 683960 cagccttcttctttatgtcag 683980

>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1476_F05
          Length = 125426

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 292  tctcctcagatcgacacctct 312
            |||||||||||||||||||||
Sbjct: 3161 tctcctcagatcgacacctct 3181

>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0496E03
          Length = 138622

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 292    tctcctcagatcgacacctct 312
              |||||||||||||||||||||
Sbjct: 102087 tctcctcagatcgacacctct 102107

>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence,
              strain 2308
          Length = 1156948

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 534    cagccttcttctttatgtcag 554
              |||||||||||||||||||||
Sbjct: 683948 cagccttcttctttatgtcag 683968

>gb|AC101684.13| Mus musculus chromosome 1, clone RP23-187I13, complete sequence
          Length = 227440

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 349    tgctcacccacatgctcatc 368
              ||||||||||||||||||||
Sbjct: 100132 tgctcacccacatgctcatc 100113

>gb|AC104574.4| Homo sapiens chromosome 15, clone RP11-259A24, complete sequence
          Length = 152130

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 534  cagccttcttctttatgtcagaaacaag 561
            |||||||||||||| ||||||| |||||
Sbjct: 2580 cagccttcttctttgtgtcagatacaag 2553

>gb|AC107908.3| Homo sapiens chromosome 15, clone CTD1-2291N1, complete sequence
          Length = 132718

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 534    cagccttcttctttatgtcagaaacaag 561
              |||||||||||||| ||||||| |||||
Sbjct: 112366 cagccttcttctttgtgtcagatacaag 112339

>gb|AC087847.6| Homo sapiens chromosome 8, clone RP11-353D5, complete sequence
          Length = 170722

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   tgccttcagccttcttcttt 547
             ||||||||||||||||||||
Sbjct: 26527 tgccttcagccttcttcttt 26546

>gb|AC084250.6| Homo sapiens chromosome 8, clone RP11-89F14, complete sequence
          Length = 151889

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 528   tgccttcagccttcttcttt 547
             ||||||||||||||||||||
Sbjct: 85355 tgccttcagccttcttcttt 85336

>gb|AC097489.2| Homo sapiens BAC clone RP11-226A18 from 4, complete sequence
          Length = 152039

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    gataaaaattacaacgttat 50
             ||||||||||||||||||||
Sbjct: 81064 gataaaaattacaacgttat 81045

>gb|AF303741.1|AF303741 Chilo iridescent virus complete genome
          Length = 212482

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 412   tttgattgttcttctggtgt 431
             ||||||||||||||||||||
Sbjct: 76801 tttgattgttcttctggtgt 76782

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 563     aggacaggattagcatgcttcggc 586
               |||||||| |||||||||||||||
Sbjct: 4257850 aggacagggttagcatgcttcggc 4257827

>gb|AC154183.2| Mus musculus BAC clone RP23-474E16 from chromosome 17, complete
             sequence
          Length = 181773

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   gaaactctccatgttctact 202
             ||||||||||||||||||||
Sbjct: 59334 gaaactctccatgttctact 59315

>gb|AC079171.22| Homo sapiens X BAC RP11-791M20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 147895

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 335    tatcggtgtccatttgctca 354
              ||||||||||||||||||||
Sbjct: 144817 tatcggtgtccatttgctca 144836

>ref|NM_031749.1| Rattus norvegicus glucosidase 1 (Gcs1), mRNA
          Length = 2703

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 473 gtggttttggcgctggcctt 492
           ||||||||||||||||||||
Sbjct: 146 gtggttttggcgctggcctt 165

>gb|AF087431.1|AF087431 Rattus norvegicus glycoprotein processing glucosidase I mRNA,
           complete cds
          Length = 2703

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 473 gtggttttggcgctggcctt 492
           ||||||||||||||||||||
Sbjct: 146 gtggttttggcgctggcctt 165

>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1174_D05
          Length = 128525

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 563   aggacaggattagcatgcttcggc 586
             |||||||| |||||||||||||||
Sbjct: 95817 aggacagggttagcatgcttcggc 95794

>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0666G04
          Length = 141983

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 563   aggacaggattagcatgcttcggc 586
             |||||||| |||||||||||||||
Sbjct: 37620 aggacagggttagcatgcttcggc 37597


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,361,396
Number of Sequences: 3902068
Number of extensions: 5361396
Number of successful extensions: 85992
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85833
Number of HSP's gapped (non-prelim): 156
length of query: 586
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 563
effective length of database: 17,143,297,704
effective search space: 9651676607352
effective search space used: 9651676607352
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)