>gb|U83414.1|HVU83414 Hordeum vulgare cytosolic triosephosphate isomerase mRNA, complete
           cds
          Length = 1028

 Score =  103 bits (52), Expect = 1e-19
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctagcatagnacacataataaacataaacacaggagnnnnnnnggagncncnctncanct 60
           ||||||||| ||||||||||||||||||||||||||       |||| | | || || ||
Sbjct: 927 ctagcatagtacacataataaacataaacacaggagaaaaaaaggagtctctcttcatct 868

                                                   
Query: 61  ncgccagctnccnccacgccgagaggagccacgtcgagat 100
            |||||||| || |||||||||||||||||||||||||||
Sbjct: 867 tcgccagcttcctccacgccgagaggagccacgtcgagat 828

>emb|Z26875.1|SCTRPIS S.cereale tpi gene for triosephosphate isomerase
          Length = 1033

 Score = 46.1 bits (23), Expect = 0.022
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 74  ccacgccgagaggagccacgtcgagat 100
           ||||||||||||||||||| |||||||
Sbjct: 851 ccacgccgagaggagccacatcgagat 825

>gb|AC102931.10| Mus musculus chromosome 7, clone RP24-221B5, complete sequence
          Length = 164298

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 11    acacataataaacataaacacagg 34
             |||||||||||||||||| |||||
Sbjct: 59095 acacataataaacataaagacagg 59072

>gb|BC072750.1| Xenopus laevis MGC79115 protein, mRNA (cDNA clone MGC:79115
            IMAGE:5049282), complete cds
          Length = 6004

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 5    catagnacacataataaacataa 27
            ||||| |||||||||||||||||
Sbjct: 3624 catagaacacataataaacataa 3646

>emb|Z15118.1|KTTBMAXVR T.brucei kinetoplast maxicircle variable region DNA
          Length = 7395

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 11   acacataataaacataaaca 30
            ||||||||||||||||||||
Sbjct: 7346 acacataataaacataaaca 7327

>emb|AL391383.15| Human DNA sequence from clone RP11-532O21 on chromosome 13 Contains the
             5' of the gene for transcription factor (p38 interacting
             protein) (P38IP) (tumor rejection antigen), the gene for a
             novel protein similar to casein kinase I alpha 1 CSNK1A1
             and a CpG island, complete sequence
          Length = 98921

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    ataataaacataaacacagg 34
             ||||||||||||||||||||
Sbjct: 61901 ataataaacataaacacagg 61920

>gb|AC158575.3| Mus musculus chromosome 7, clone RP23-275H16, complete sequence
          Length = 221489

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 11     acacataataaacataaacacagg 34
              |||||||||||||||||| |||||
Sbjct: 204597 acacataataaacataaagacagg 204620

>emb|AL929016.5| Zebrafish DNA sequence from clone DKEY-24J9 in linkage group 4 Contains
             the gene for a novel protein (zgc:63880), the 3' end of
             the gene for a novel protein similar to vertebrate KCND2,
             the 5' end of the ing3 gene for inhibitor of growth family
             member 3 and a CpG island, complete sequence
          Length = 200582

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    aataaacataaacacaggag 36
             ||||||||||||||||||||
Sbjct: 30639 aataaacataaacacaggag 30620

>emb|BX323467.8| Zebrafish DNA sequence from clone DKEY-48N15, complete sequence
          Length = 116326

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  acacataataaacataaaca 30
           ||||||||||||||||||||
Sbjct: 384 acacataataaacataaaca 365

>emb|BX936428.10| Zebrafish DNA sequence from clone RP71-19F19 in linkage group 5, complete
              sequence
          Length = 188618

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     acataataaacataaacaca 32
              ||||||||||||||||||||
Sbjct: 177233 acataataaacataaacaca 177252

>emb|BX649392.6| Zebrafish DNA sequence from clone DKEY-84J12 in linkage group 5,
             complete sequence
          Length = 197352

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    acataataaacataaacaca 32
             ||||||||||||||||||||
Sbjct: 76337 acataataaacataaacaca 76318

>emb|BX323798.6| Zebrafish DNA sequence from clone CH211-225G5, complete sequence
          Length = 81343

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    acacataataaacataaaca 30
             ||||||||||||||||||||
Sbjct: 79727 acacataataaacataaaca 79708

>gb|M18978.1|TRBKPVR T.brucei kinetoplast maxicircle DNA, variable region R3-D3
          Length = 1335

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 11   acacataataaacataaaca 30
            ||||||||||||||||||||
Sbjct: 1312 acacataataaacataaaca 1293

>gb|M94286.1|TRBKPGEN Trypanosoma brucei brucei kinetoplast maxicircle genes, putative cds
          Length = 23016

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 11   acacataataaacataaaca 30
            ||||||||||||||||||||
Sbjct: 1314 acacataataaacataaaca 1295

>gb|AE014832.1| Plasmodium falciparum 3D7 chromosome 10 section 4 of 7 of the complete
              sequence
          Length = 258658

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 14     cataataaacataaacaca 32
              |||||||||||||||||||
Sbjct: 190857 cataataaacataaacaca 190875

>gb|AC159376.12| Mus musculus 10 BAC RP23-114N21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 223292

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 13     acataataaacataaacac 31
              |||||||||||||||||||
Sbjct: 152966 acataataaacataaacac 152948

>gb|AC161169.10| Mus musculus chromosome 5, clone RP24-102B13, complete sequence
          Length = 239061

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 18     ataaacataaacacaggag 36
              |||||||||||||||||||
Sbjct: 230065 ataaacataaacacaggag 230083

>gb|AC111044.9| Mus musculus chromosome 10, clone RP23-299H4, complete sequence
          Length = 165614

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 13    acataataaacataaacac 31
             |||||||||||||||||||
Sbjct: 44111 acataataaacataaacac 44093

>emb|AL359197.20| Human DNA sequence from clone RP11-498I18 on chromosome 1, complete
             sequence
          Length = 191686

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 13    acataataaacataaacac 31
             |||||||||||||||||||
Sbjct: 24737 acataataaacataaacac 24755

>emb|Z98601.1|SPAC24C9 S.pombe chromosome I cosmid c24C9
          Length = 38666

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 15    ataataaacataaacacag 33
             |||||||||||||||||||
Sbjct: 15561 ataataaacataaacacag 15579

>gb|AC157551.6| Mus musculus chromosome 5, clone RP24-270K7, complete sequence
          Length = 171680

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 18  ataaacataaacacaggag 36
           |||||||||||||||||||
Sbjct: 855 ataaacataaacacaggag 873

>ref|NM_001019457.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC24C9.07c),
            partial mRNA
          Length = 5685

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 15   ataataaacataaacacag 33
            |||||||||||||||||||
Sbjct: 5072 ataataaacataaacacag 5054

>emb|BX323067.11| Zebrafish DNA sequence from clone CH211-277B21 in linkage group 24,
             complete sequence
          Length = 152092

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 12    cacataataaacataaaca 30
             |||||||||||||||||||
Sbjct: 79592 cacataataaacataaaca 79610

>dbj|BS000217.1| Pan troglodytes chromosome 22 clone:PTB-004I03, map 22, complete
             sequences
          Length = 53637

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    acacataataaacataaac 29
             |||||||||||||||||||
Sbjct: 16458 acacataataaacataaac 16476

>dbj|AP001823.5| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2355J17, complete
             sequence
          Length = 178189

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    cacataataaacataaaca 30
             |||||||||||||||||||
Sbjct: 12937 cacataataaacataaaca 12919

>dbj|AP001699.1| Homo sapiens genomic DNA, chromosome 21q, section 43/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 11     acacataataaacataaac 29
              |||||||||||||||||||
Sbjct: 180328 acacataataaacataaac 180346

>dbj|AP001605.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1987H1, APP-D21S292
             region, complete sequence
          Length = 165942

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    acacataataaacataaac 29
             |||||||||||||||||||
Sbjct: 82350 acacataataaacataaac 82368


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 500,288
Number of Sequences: 3902068
Number of extensions: 500288
Number of successful extensions: 37446
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37394
Number of HSP's gapped (non-prelim): 51
length of query: 117
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 96
effective length of database: 17,151,101,840
effective search space: 1646505776640
effective search space used: 1646505776640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)