Clone Information

BLAST Search Result

Clone Name	rbags4n14
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0	202	7e-52
2	RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0	191	1e-48
3	RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0	188	1e-47
4	RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A	173	3e-43
5	RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B	172	6e-43
6	RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C	172	6e-43
7	RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0	153	4e-37
8	RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E)	132	5e-31
9	RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E)	129	6e-30
10	RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E)	129	8e-30
11	RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0)	129	8e-30
12	RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E)	129	8e-30
13	RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurin...	128	1e-29
14	RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E)	125	7e-29
15	RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E)	125	9e-29
16	RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Frag...	124	1e-28
17	RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0	123	4e-28
18	RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E)	122	7e-28
19	RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0	112	6e-25
20	RLA0_CHERU (P29764) 60S acidic ribosomal protein P0 (Light-induc...	111	2e-24
21	RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0	111	2e-24
22	RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E)	106	4e-23
23	RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0	100	2e-21
24	RLA0_DICDI (P22685) 60S acidic ribosomal protein P0	99	9e-21
25	RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0	98	1e-20
26	RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0	98	1e-20
27	RLA0_TRYCR (P26796) 60S acidic ribosomal protein P0	72	1e-12
28	RLA0_LEIIN (P39097) 60S acidic ribosomal protein P0	64	3e-10
29	RLA0_LEICH (P39096) 60S acidic ribosomal protein P0	64	3e-10
30	RLA0_METJA (P54049) Acidic ribosomal protein P0 homolog (L10E)	56	6e-08
31	RLA0_PYRAB (Q9UXS5) Acidic ribosomal protein P0 homolog (L10E)	55	1e-07
32	RLA0_METVO (Q9Y8J3) Acidic ribosomal protein P0 homolog (L10E) (...	55	1e-07
33	RLA0_PYRHO (O74109) Acidic ribosomal protein P0 homolog (L10E)	55	2e-07
34	RLA0_METTL (O52705) Acidic ribosomal protein P0 homolog (L10E)	54	2e-07
35	RLA0_PYRFU (Q8TZJ8) Acidic ribosomal protein P0 homolog (L10E)	52	9e-07
36	RLA0_METVA (P15826) Acidic ribosomal protein P0 homolog (L10E) (...	50	5e-06
37	RLA0_PYRKO (Q5JH36) Acidic ribosomal protein P0 homolog (L10E)	49	8e-06
38	RLA0_HALMA (P15825) 50S ribosomal protein L10E (Ribosomal protei...	47	3e-05
39	RLA0_HALSA (P13553) Acidic ribosomal protein P0 homolog (L10E)	45	1e-04
40	RLA0_HALVO (P41198) Acidic ribosomal protein P0 homolog (L10E)	44	4e-04
41	RLA0_METMA (Q8PY51) Acidic ribosomal protein P0 homolog (L10E)	42	0.001
42	RLA0_ARCFU (O28781) Acidic ribosomal protein P0 homolog (L10E)	40	0.004
43	RLA0_SULSO (P96039) Acidic ribosomal protein P0 homolog (L10E) (...	40	0.006
44	RLA0_METAC (Q8TI80) Acidic ribosomal protein P0 homolog (L10E)	39	0.010
45	RLA0_THEAC (P57692) Acidic ribosomal protein P0 homolog (L10E)	39	0.010
46	RLA0_SULAC (P35023) Acidic ribosomal protein P0 homolog (L10E) (...	37	0.052
47	RLA0_SULTO (Q971J2) Acidic ribosomal protein P0 homolog (L10E)	33	0.44
48	YBH7_YEAST (P38183) Very hypothetical 16.3 kDa protein in NUP170...	30	4.9
49	PITX2_RAT (Q9R0W1) Pituitary homeobox 2 (rPtx2)	30	6.4
50	PITX2_MOUSE (P97474) Pituitary homeobox 2 (Orthodenticle-like ho...	30	6.4
51	PITX2_HUMAN (Q99697) Pituitary homeobox 2 (RIEG bicoid-related h...	30	6.4

>RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0|
          Length = 318

 Score =  202 bits (513), Expect = 7e-52
 Identities = 105/145 (72%), Positives = 113/145 (77%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           SALLAKLGIRPFSYGLVI NVYDSGSVFSPEVLDLTE+DLM+KFASGVSMVAS+SLAISY
Sbjct: 174 SALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISY 233

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXX 215
           PT+AAAPHMFLN YKNVLAVA+ET+YSY HADKIKEYLKDPSKFAV              
Sbjct: 234 PTIAAAPHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAPVAADSGAAAPS 293

Query: 214 XXXXXXXXXXXXXXSDGEMGFSLFD 140
                         SDG++G SLFD
Sbjct: 294 AAKEEEKKEEPEEESDGDLGMSLFD 318

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>RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0|
          Length = 318

 Score =  191 bits (486), Expect = 1e-48
 Identities = 101/146 (69%), Positives = 111/146 (76%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           SALLAKLGIRPFSYGL + +VY+ GSVFSPEVLDL+EEDL++KFA+GVSMVASLSLAISY
Sbjct: 174 SALLAKLGIRPFSYGLQVTSVYEDGSVFSPEVLDLSEEDLIEKFATGVSMVASLSLAISY 233

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXX 215
           PT+AA PHMF+N YKNVLAVA+ETDYSY HADKIKEYLKDPSKFAV              
Sbjct: 234 PTLAAVPHMFINGYKNVLAVAVETDYSYPHADKIKEYLKDPSKFAV-AAPVAAGDSGASA 292

Query: 214 XXXXXXXXXXXXXXSDGEMGFSLFDD 137
                         SD EMGFSLFDD
Sbjct: 293 APKEEEKAAEPEEESDEEMGFSLFDD 318

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>RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0|
          Length = 320

 Score =  188 bits (477), Expect = 1e-47
 Identities = 98/146 (67%), Positives = 111/146 (76%), Gaps = 1/146 (0%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           +ALLAKLGIRPFSYGLV+ +VYD+GSVFSPEVLDLTE+DL+ KFA+GVSMV SLSLAISY
Sbjct: 175 AALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKFAAGVSMVTSLSLAISY 234

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXX-XXXXXXXX 218
           PT+AAAPHMF+NAYKNVLAVA+ETDYS+  ADK+KEYLKDPSKFAV              
Sbjct: 235 PTLAAAPHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAASGAPA 294

Query: 217 XXXXXXXXXXXXXXXSDGEMGFSLFD 140
                          SD +MGFSLFD
Sbjct: 295 AAAKEEEKKEEPAEESDDDMGFSLFD 320

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>RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A|
          Length = 317

 Score =  173 bits (439), Expect = 3e-43
 Identities = 89/144 (61%), Positives = 109/144 (75%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           +ALLAKLGIRPFSYGLV+ +VYD+GSVF+PEVL+LTE+DL++KFA+GVSM+ +LSLAISY
Sbjct: 175 AALLAKLGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISY 234

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXX 215
           PT+AAAPHMFLNAYKNVLAVAL T+YS+  A+ +KE+LKDP+KFAV              
Sbjct: 235 PTVAAAPHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAV--AVAAPVSGESGG 292

Query: 214 XXXXXXXXXXXXXXSDGEMGFSLF 143
                         SDG+MGF LF
Sbjct: 293 AVVAVAVEEEAAEESDGDMGFDLF 316

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>RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B|
          Length = 320

 Score =  172 bits (436), Expect = 6e-43
 Identities = 85/146 (58%), Positives = 105/146 (71%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           +ALLAKLGIRPFSYGLV+ +VYD+GSVFSPEVLDLTE+ L++KFASG+SMV SL+LA+SY
Sbjct: 174 AALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSY 233

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXX 215
           PT+AAAPHMF+NAYKN LA+A+ T+Y++  A+K+KEYLKDPSKFAV              
Sbjct: 234 PTLAAAPHMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGA 293

Query: 214 XXXXXXXXXXXXXXSDGEMGFSLFDD 137
                          D    F LFD+
Sbjct: 294 PAAAKVEEKEESDEEDYGGDFGLFDE 319

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>RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C|
          Length = 323

 Score =  172 bits (436), Expect = 6e-43
 Identities = 87/149 (58%), Positives = 107/149 (71%), Gaps = 3/149 (2%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           +ALLAKLGIRPFSYGLV+ +VYD+GSVFSPEVLDLTE+ L++KFASG+SMV SL+LA+SY
Sbjct: 174 AALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSY 233

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXX 215
           PT+AAAPHMF+NAYKN LA+A+ TDY++  A+K+KE+LKDPSKF V              
Sbjct: 234 PTLAAAPHMFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAAAVSADAGGGSA 293

Query: 214 XXXXXXXXXXXXXXSDG---EMGFSLFDD 137
                         SD    E GF LFD+
Sbjct: 294 QAGAAAKVEEKKEESDEEDYEGGFGLFDE 322

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>RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0|
          Length = 322

 Score =  153 bits (386), Expect = 4e-37
 Identities = 80/148 (54%), Positives = 97/148 (65%), Gaps = 2/148 (1%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           +ALLAKLGIRPFSYGLV+ +VYD+GSVF PEVLDLTE+DL++KFA GVS       +   
Sbjct: 175 AALLAKLGIRPFSYGLVVLSVYDNGSVFKPEVLDLTEDDLLEKFAIGVSQCYFSDTSHFI 234

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXX 215
           P  +AAPH+F+NAYKNVLAVA+ T+YS+  AD++KEYLKDPSKFA               
Sbjct: 235 PNPSAAPHVFINAYKNVLAVAVATEYSFPQADEVKEYLKDPSKFAAVAAAAAPAADSGAA 294

Query: 214 XXXXXXXXXXX--XXXSDGEMGFSLFDD 137
                           SD EMGF LFD+
Sbjct: 295 PAAAAKAEKEEEPAEESDDEMGFGLFDE 322

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>RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E)|
          Length = 319

 Score =  132 bits (333), Expect = 5e-31
 Identities = 67/143 (46%), Positives = 86/143 (60%)
 Frame = -1

Query: 568 LLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPT 389
           +L  L I PFSYGL+I  VYD+GSV+SPEVLD+TE+ L  +F  GV  +AS+ L I YPT
Sbjct: 177 MLNMLNISPFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGYPT 236

Query: 388 MAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXX 209
           +A+ PH  +N YK VLAV +ETDY++  A+K+K YL DP+ FAV                
Sbjct: 237 LASIPHTIINGYKRVLAVTVETDYTFPLAEKVKAYLADPTAFAVAAPVAAATEQKSAAPA 296

Query: 208 XXXXXXXXXXXXSDGEMGFSLFD 140
                       SD +MGF LFD
Sbjct: 297 AKEEAPKEDSEESDEDMGFGLFD 319

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>RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score =  129 bits (324), Expect = 6e-30
 Identities = 62/106 (58%), Positives = 79/106 (74%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + LL  L I PFSYGL+I  VYD+GSV+SPEVLD+TE+ L  +F  GV  +AS+ L I Y
Sbjct: 172 ATLLNMLNISPFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLEGVRNIASVCLQIGY 231

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAV 257
           PT+A+ PH  +N YK VL VA+ETDYS+  ADK+K +L DPS+FAV
Sbjct: 232 PTLASIPHSIINGYKRVLRVAVETDYSFPMADKVKAFLADPSRFAV 277

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>RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E)|
          Length = 315

 Score =  129 bits (323), Expect = 8e-30
 Identities = 67/145 (46%), Positives = 87/145 (60%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + LL  L I PFS+GL+I  VYD+GS++SPEVLD+TE+ L  +F  GV  +AS+ L I Y
Sbjct: 172 ATLLNMLNISPFSFGLIIQQVYDNGSIYSPEVLDITEDALRARFLEGVRNIASVCLQIGY 231

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXX 215
           PT+A+ PH  +N YK VLA+A+ETDYS+  ADK+K +L DPS F V              
Sbjct: 232 PTVASVPHSVVNGYKRVLALAVETDYSFPLADKVKAFLADPSAFVV-AAPVAETAAAPAA 290

Query: 214 XXXXXXXXXXXXXXSDGEMGFSLFD 140
                         SD +MGF LFD
Sbjct: 291 SAAPAKEEKEESEESDDDMGFGLFD 315

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>RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0)|
          Length = 317

 Score =  129 bits (323), Expect = 8e-30
 Identities = 66/146 (45%), Positives = 85/146 (58%), Gaps = 1/146 (0%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + LL  L I PFSYGL I  VYDSGS+FSPE+LD+  EDL  KF +GV+ +A++SL I Y
Sbjct: 172 ATLLNMLNISPFSYGLAITQVYDSGSIFSPEILDIKPEDLRAKFQAGVANLAAVSLQIGY 231

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKF-AVXXXXXXXXXXXXX 218
           PT+A+APH   N +KN+LA+A  T+  +  A  IKE++KDPSKF A              
Sbjct: 232 PTIASAPHSIANGFKNLLAIAASTEVEFKQAATIKEFIKDPSKFVAAAAASAPAAGAGAA 291

Query: 217 XXXXXXXXXXXXXXXSDGEMGFSLFD 140
                           D +MGF LFD
Sbjct: 292 AEKKEEAKKEESESEEDDDMGFGLFD 317

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>RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E)|
          Length = 316

 Score =  129 bits (323), Expect = 8e-30
 Identities = 66/145 (45%), Positives = 86/145 (59%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + LL  L I PFS+GLVI  V+D+GS+++PEVLD+TEE L  +F  GV  VAS+ L I Y
Sbjct: 172 ATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHKRFLEGVRNVASVCLQIGY 231

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXX 215
           PT+A+ PH  +N YK VLAVA+ETDY++  A+K+K +L DPS F                
Sbjct: 232 PTIASVPHSIVNGYKRVLAVAVETDYTFPLAEKVKAFLADPSAFVAAAPVVVETAAPAAA 291

Query: 214 XXXXXXXXXXXXXXSDGEMGFSLFD 140
                         SD +MGF LFD
Sbjct: 292 AAPAKEAPKEESEESDEDMGFGLFD 316

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>RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurinic or|
           apyrimidinic site) lyase) (EC 4.2.99.18)
           (Apurinic-apyrimidinic endonuclease)
          Length = 317

 Score =  128 bits (322), Expect = 1e-29
 Identities = 64/146 (43%), Positives = 85/146 (58%), Gaps = 1/146 (0%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + LL  L I PFSYGL++  VYDSGS+FSPE+LD+  EDL  KF  GV+ +A++ L++ Y
Sbjct: 172 ATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGY 231

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXX-XXXXXX 218
           PT+A+APH   N +KN+LA+A  T+  +  A  IKEY+KDPSKFA               
Sbjct: 232 PTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGAT 291

Query: 217 XXXXXXXXXXXXXXXSDGEMGFSLFD 140
                           D +MGF LFD
Sbjct: 292 EKKEEAKKPESESEEEDDDMGFGLFD 317

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>RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score =  125 bits (315), Expect = 7e-29
 Identities = 65/146 (44%), Positives = 87/146 (59%), Gaps = 1/146 (0%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + LL  L I PFS+GLVI  V+D+GS+++PEVLD+TEE L  +F  GV  VAS+ L I Y
Sbjct: 172 ATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY 231

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKF-AVXXXXXXXXXXXXX 218
           PT+A+ PH  +N YK VLA+++ETDY++  A+K+K +L DPS F A              
Sbjct: 232 PTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAA 291

Query: 217 XXXXXXXXXXXXXXXSDGEMGFSLFD 140
                          SD +MGF LFD
Sbjct: 292 AAAPAKVEAKEESEESDEDMGFGLFD 317

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>RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score =  125 bits (314), Expect = 9e-29
 Identities = 64/146 (43%), Positives = 87/146 (59%), Gaps = 1/146 (0%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + LL  L I PFS+GL+I  V+D+GS++SPEVLD+TE+ L  +F  GV  VAS+ L I Y
Sbjct: 172 ATLLNMLNISPFSFGLIIQQVFDNGSIYSPEVLDITEQALHTRFLEGVRNVASVCLQIGY 231

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXX-XXXXXXXXXXX 218
           PT+A+ PH  +N YK VLA+++ETDY++  A+K+K +L DPS FA               
Sbjct: 232 PTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFAAAAPVAAATTAAPAA 291

Query: 217 XXXXXXXXXXXXXXXSDGEMGFSLFD 140
                          SD +MGF LFD
Sbjct: 292 AAAPAKVEAKEESEESDEDMGFGLFD 317

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>RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Fragment)|
          Length = 309

 Score =  124 bits (312), Expect = 1e-28
 Identities = 65/147 (44%), Positives = 87/147 (59%), Gaps = 2/147 (1%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + LL  L I PFS+GLVI  V+D+GS+++PEVLD+TEE L  +F  GV  VAS+ L I Y
Sbjct: 163 ATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY 222

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKF--AVXXXXXXXXXXXX 221
           PT+A+ PH  +N YK VLA+++ETDY++  A+K+K +L DPS F  A             
Sbjct: 223 PTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAAPAAAPAA 282

Query: 220 XXXXXXXXXXXXXXXXSDGEMGFSLFD 140
                           SD +MGF LFD
Sbjct: 283 TTAAPAKVEAKEESEESDEDMGFGLFD 309

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>RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0|
          Length = 311

 Score =  123 bits (308), Expect = 4e-28
 Identities = 65/145 (44%), Positives = 86/145 (59%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           SALL  LG+ PFSYGLV+  VYD G++++PEVLD+T E+L  +F SGV  VAS+SLA++Y
Sbjct: 171 SALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNY 230

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXX 215
           PT+A+  H   N  +N+L VA  TD S+  A+ IK ++ DPSKFA               
Sbjct: 231 PTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFIADPSKFA----AAAPAAAAAPA 286

Query: 214 XXXXXXXXXXXXXXSDGEMGFSLFD 140
                         SD +MGF LFD
Sbjct: 287 AAAPAAKKEEPKEESDDDMGFGLFD 311

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>RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score =  122 bits (306), Expect = 7e-28
 Identities = 61/146 (41%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + LL  L I PFS+GL+I  V+D+GS+++PEVLD+TE+ L  +F  GV  VAS+ L I Y
Sbjct: 172 ATLLNMLNISPFSFGLIIQQVFDNGSIYNPEVLDITEQALHSRFLEGVRNVASVCLQIGY 231

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXX-XXXXXXXXXXX 218
           PT+A+ PH  +N YK VLA+++ET+Y++   +K+K +L DPS FA               
Sbjct: 232 PTVASVPHSIINGYKRVLALSVETEYTFPLTEKVKAFLADPSAFAAAAPAAAATTAAPAA 291

Query: 217 XXXXXXXXXXXXXXXSDGEMGFSLFD 140
                          SD +MGF LFD
Sbjct: 292 AAAPAKAEAKEESEESDEDMGFGLFD 317

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>RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0|
          Length = 312

 Score =  112 bits (281), Expect = 6e-25
 Identities = 55/145 (37%), Positives = 84/145 (57%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + LL  L I PF+YG+ +  +YD G+VFSPE+LD++EEDL+    S  S++ ++SL  +Y
Sbjct: 170 ATLLNMLNISPFTYGMDVLTIYDQGNVFSPEILDVSEEDLIGHLLSAASIITAISLGANY 229

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXX 215
           PT+ +  H  +NAYKN++AV+L T+Y+++  ++ K +L DPS F V              
Sbjct: 230 PTILSVMHSVVNAYKNLVAVSLATEYTFEGTEQTKAFLADPSAFVV--AAAPAAAAGGEA 287

Query: 214 XXXXXXXXXXXXXXSDGEMGFSLFD 140
                         SD +MGF LFD
Sbjct: 288 EAPAAEAAAEEEEESDEDMGFGLFD 312

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>RLA0_CHERU (P29764) 60S acidic ribosomal protein P0 (Light-induced 34 kDa|
           protein)
          Length = 321

 Score =  111 bits (277), Expect = 2e-24
 Identities = 55/68 (80%), Positives = 63/68 (92%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           +ALLAKLGIRPFSYGL + +VYD GSVFSPEVLDLTE+DL+ +FA+GVSMV SLSLAISY
Sbjct: 175 AALLAKLGIRPFSYGLNVESVYDDGSVFSPEVLDLTEDDLLARFATGVSMVTSLSLAISY 234

Query: 394 PTMAAAPH 371
           PT+AAAPH
Sbjct: 235 PTLAAAPH 242

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>RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0|
          Length = 314

 Score =  111 bits (277), Expect = 2e-24
 Identities = 54/145 (37%), Positives = 86/145 (59%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + LL KL ++PF+YGL + +VYD+GSV+S  VLD+T+E +++ FA+G + VA++S A+  
Sbjct: 171 ATLLHKLSVKPFTYGLKVEHVYDNGSVYSASVLDITDEQILEAFAAGAANVAAVSRAVGL 230

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXX 215
           P+ AAAPH  L A++N  A+ L+T + +    ++KE +++P+ FA               
Sbjct: 231 PSAAAAPHSILEAFRNCAALCLDTPFCFPQMQRLKEMVENPAAFA-AAAAPAAAAPAAAP 289

Query: 214 XXXXXXXXXXXXXXSDGEMGFSLFD 140
                          DG+MGFSLFD
Sbjct: 290 AAAAKAPEPEEEEEEDGDMGFSLFD 314

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>RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E)|
          Length = 312

 Score =  106 bits (265), Expect = 4e-23
 Identities = 53/145 (36%), Positives = 80/145 (55%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           ++LL  L I PF++GL +  VYD+G VF   +LD+T+E+L+  F S VS +AS+SLAI Y
Sbjct: 170 ASLLNLLNISPFTFGLTVVQVYDNGQVFPSSILDITDEELVSHFVSAVSTIASISLAIGY 229

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXX 215
           PT+ +  H  +N YK++LAVA+   Y Y   + + + +++P K+A               
Sbjct: 230 PTLPSVGHTLINNYKDLLAVAIAASYHYPEIEDLVDRIENPEKYA--AAAPAATSAASGD 287

Query: 214 XXXXXXXXXXXXXXSDGEMGFSLFD 140
                         SD +MGF LFD
Sbjct: 288 AAPAEEAAAEEEEESDDDMGFGLFD 312

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>RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0|
          Length = 313

 Score =  100 bits (250), Expect = 2e-21
 Identities = 45/105 (42%), Positives = 74/105 (70%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + LL  L I PF+YG+ I  VYD G+ F  +VLD++EE L+  F++ ++ +ASLSLA+++
Sbjct: 170 ATLLNMLNISPFTYGMGIAQVYDQGNTFPSDVLDISEEQLLKAFSTAITTIASLSLALNF 229

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFA 260
           PT+ +  H  +NAYK VLAVA+ET+ S+   +++K+ + +P  +A
Sbjct: 230 PTLPSVIHSVVNAYKKVLAVAIETEISWPEIEELKDRIANPEAYA 274

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>RLA0_DICDI (P22685) 60S acidic ribosomal protein P0|
          Length = 305

 Score = 99.0 bits (245), Expect = 9e-21
 Identities = 45/95 (47%), Positives = 70/95 (73%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + LL KL I+PF+YGL    +YD+G+ +SP +   +EEDL++KF  G+  +A++SL I Y
Sbjct: 171 ATLLQKLNIKPFTYGLEPKIIYDAGACYSPSI---SEEDLINKFKQGIFNIAAISLEIGY 227

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 290
           PT+A+ PH  +NA+KN+LA++ ET Y++D A+K K
Sbjct: 228 PTVASIPHSVMNAFKNLLAISFETSYTFDAAEKFK 262

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>RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0|
          Length = 314

 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 43/105 (40%), Positives = 73/105 (69%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + LL  L I PF+YG+ I  VYD G+ F   VLD++EE L+  F+S ++ +A++SLA+++
Sbjct: 170 ATLLNMLNISPFTYGMGIAQVYDQGNTFPSSVLDISEEQLLKAFSSAITTIAAVSLALNF 229

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFA 260
           PT+ +  H  +N+YK VLAVA+ET+ S+   +++K+ + +P  +A
Sbjct: 230 PTLPSVIHSLVNSYKKVLAVAIETEISWPEIEELKDRIANPEAYA 274

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>RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0|
          Length = 316

 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 49/145 (33%), Positives = 82/145 (56%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + LL K  + P SYG+ +  VYD G ++  +VLD+T+ED+++KF+ GVS VA+LS A   
Sbjct: 173 ATLLRKFNMNP-SYGVDVRTVYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGV 231

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXX 215
            T A+ PH+F+ A+KN++A+ +++DY++     +K+++++P  FA               
Sbjct: 232 ITEASYPHVFVEAFKNIVALIIDSDYTFPLMKILKKWVENPEAFAAVAAPASAAKADEPK 291

Query: 214 XXXXXXXXXXXXXXSDGEMGFSLFD 140
                          DG MGF +FD
Sbjct: 292 KEEAKKVEEEEEEEEDGFMGFGMFD 316

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>RLA0_TRYCR (P26796) 60S acidic ribosomal protein P0|
          Length = 323

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 35/92 (38%), Positives = 55/92 (59%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + LL KL I PF Y + + +V+D G +F  E L +T++ +      G+S VA+LSL    
Sbjct: 179 ATLLQKLDISPFYYQVEVQSVWDRGMLFLREDLSITDDVVEKYLLEGISNVAALSLGAGI 238

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYDHAD 299
           PT A  PHM ++A+K +L  ++ T+Y +D  D
Sbjct: 239 PTAATLPHMIMDAFKTLLGASVATEYEFDEFD 270

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>RLA0_LEIIN (P39097) 60S acidic ribosomal protein P0|
          Length = 323

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 32/89 (35%), Positives = 55/89 (61%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + LL KL I PF Y + + +V+D G +F+ E L +TE+ +      G+S VA+++L    
Sbjct: 179 ATLLQKLNISPFYYQVNVLSVWDRGVLFTREDLMMTEDMVEKMLMEGLSNVAAMALGAGI 238

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYD 308
           PT +    M ++A+KN+LAV++ T Y ++
Sbjct: 239 PTSSTIGPMLVDAFKNLLAVSVATSYEFE 267

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>RLA0_LEICH (P39096) 60S acidic ribosomal protein P0|
          Length = 322

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 32/89 (35%), Positives = 55/89 (61%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + LL KL I PF Y + + +V+D G +F+ E L +TE+ +      G+S VA+++L    
Sbjct: 178 ATLLQKLNISPFYYQVNVLSVWDRGVLFTREDLMMTEDMVEKMLMEGLSNVAAMALGAGI 237

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDYSYD 308
           PT +    M ++A+KN+LAV++ T Y ++
Sbjct: 238 PTSSTIGPMLVDAFKNLLAVSVATSYEFE 266

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>RLA0_METJA (P54049) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 338

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 27/86 (31%), Positives = 48/86 (55%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           +A+L +LGI+P   GL I  VY+ G +++P+VL + EE L+    +      +L+   +Y
Sbjct: 178 AAVLDRLGIKPIKVGLNILAVYEDGIIYTPDVLKVDEEKLLADIQAAYQNAFNLAFNTAY 237

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDY 317
           P     P +   A+ N  A+++ET +
Sbjct: 238 PAKEVLPFLIQKAFINARALSVETAF 263

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>RLA0_PYRAB (Q9UXS5) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 341

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 28/84 (33%), Positives = 46/84 (54%)
 Frame = -1

Query: 568 LLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPT 389
           +L  LGI+P   GL +  VY+ G V++P+VL + E++ +D          +L++ I+YPT
Sbjct: 176 ILNALGIQPLEVGLDVLAVYEDGIVYTPDVLAIDEQEYIDMVQKAYMHAFNLAVNIAYPT 235

Query: 388 MAAAPHMFLNAYKNVLAVALETDY 317
                 +   A+ N  AVA+E  Y
Sbjct: 236 PETIEAIIQKAFLNAKAVAVEAGY 259

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>RLA0_METVO (Q9Y8J3) Acidic ribosomal protein P0 homolog (L10E) (Fragment)|
          Length = 297

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 27/83 (32%), Positives = 46/83 (55%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + +L+KL I+P   GL +  VY+ G V+ PE+L + E++ + K  S  +   +LS+    
Sbjct: 179 AVVLSKLDIKPMEVGLNVLGVYEDGIVYDPEILKIDEDEFLAKLQSAYTGAFNLSVNAVI 238

Query: 394 PTMAAAPHMFLNAYKNVLAVALE 326
           PT A    +   A+ N  AV++E
Sbjct: 239 PTSATIETIVQKAFSNAKAVSIE 261

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>RLA0_PYRHO (O74109) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 342

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 27/84 (32%), Positives = 45/84 (53%)
 Frame = -1

Query: 568 LLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPT 389
           +L  LGI+P   GL +  VY+ G V++P+VL + E++ +D          +L++ I+YPT
Sbjct: 176 ILNALGIQPLEVGLDVLAVYEDGIVYTPDVLAIDEQEYIDMLQKAYMHAFNLAVNIAYPT 235

Query: 388 MAAAPHMFLNAYKNVLAVALETDY 317
                 +   A+ N   VA+E  Y
Sbjct: 236 PETIEAIIQKAFLNAKTVAIEAGY 259

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>RLA0_METTL (O52705) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 338

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 25/86 (29%), Positives = 48/86 (55%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + +L+ LGI+P + GL +   Y+ G +++P+VL + EE+ + K     S   +LS+  + 
Sbjct: 179 AVVLSALGIKPVTVGLNLLAAYEDGVIYTPDVLKIDEEEFVQKIQDAYSKAFNLSVNAAI 238

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDY 317
           PT      +   A+ N  AV++E+ +
Sbjct: 239 PTAQTIETLLQKAFANARAVSIESAF 264

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>RLA0_PYRFU (Q8TZJ8) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 339

 Score = 52.4 bits (124), Expect = 9e-07
 Identities = 26/84 (30%), Positives = 45/84 (53%)
 Frame = -1

Query: 568 LLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPT 389
           +L  LGI+P   GL +  VY+ G +++P+VL + E + ++          +L++ I+YPT
Sbjct: 176 ILNALGIQPLEVGLDLLAVYEDGIIYTPDVLAIDESEYINMLQKAYMHAFNLAVNIAYPT 235

Query: 388 MAAAPHMFLNAYKNVLAVALETDY 317
                 +   A+ N  AVA+E  Y
Sbjct: 236 PQTIEAIIQKAFLNAKAVAVEAGY 259

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>RLA0_METVA (P15826) Acidic ribosomal protein P0 homolog (L10E) (ML2)|
          Length = 336

 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 24/86 (27%), Positives = 48/86 (55%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + +L+ LGI+P + GL +  VY+ G +++ +VL + EE+ + K     +   +LS+    
Sbjct: 179 AVVLSALGIKPVTVGLNVLGVYEEGVIYTSDVLRIDEEEFLGKLQKAYTNAFNLSVNAVI 238

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDY 317
           PT A    +   A+ +  AV++E+ +
Sbjct: 239 PTSATIETIVQKAFNDAKAVSVESAF 264

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>RLA0_PYRKO (Q5JH36) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 340

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 26/84 (30%), Positives = 41/84 (48%)
 Frame = -1

Query: 568 LLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPT 389
           +L  LGI P   GL +   Y+ G V++P+VL + E + ++          +LS+ I+YPT
Sbjct: 175 ILNALGIEPLEVGLNLLAAYEDGIVYTPDVLAIDESEYINMLQKAYMHAFNLSVNIAYPT 234

Query: 388 MAAAPHMFLNAYKNVLAVALETDY 317
                 +   AY     VA+E  Y
Sbjct: 235 KQTIEAILQKAYLGAKNVAVEAGY 258

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>RLA0_HALMA (P15825) 50S ribosomal protein L10E (Ribosomal protein L10) (Acidic|
           ribosomal protein P0 homolog) (L10E) (HMal10)
          Length = 348

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 27/83 (32%), Positives = 42/83 (50%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           S +L +LGI P   GL +  V+  G +F PE L+L  ++      +      +LS+   Y
Sbjct: 176 SNVLNELGIEPKEVGLDLRAVFADGVLFEPEELELDIDEYRSDIQAAAGRAFNLSVNADY 235

Query: 394 PTMAAAPHMFLNAYKNVLAVALE 326
           PT   AP M  +A  N  ++AL+
Sbjct: 236 PTATTAPTMLQSARGNAKSLALQ 258

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>RLA0_HALSA (P13553) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 352

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           S +L++LGI P   GL +  V+  G +F+PE L++  ++      S  +   +LS+  +Y
Sbjct: 176 SNVLSELGIEPKEVGLDLRGVFSEGVLFTPEELEIDVDEYRADIQSAAASARNLSVNAAY 235

Query: 394 PTMAAAPHMFLNAYKNVLAVALETDY-SYDHADKI 293
           PT   AP +         ++ L+    S D AD +
Sbjct: 236 PTERTAPDLIAKGRGEAKSLGLQASVESPDLADDL 270

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>RLA0_HALVO (P41198) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 350

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 25/80 (31%), Positives = 37/80 (46%)
 Frame = -1

Query: 568 LLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPT 389
           +LA+LGI P   GL +  V+  G +F P+ L +  ++      S      +LS+   YPT
Sbjct: 178 VLAELGIEPKEVGLDLRGVFSEGVLFEPDELAIDVDEYRADIQSASPAATNLSVNAVYPT 237

Query: 388 MAAAPHMFLNAYKNVLAVAL 329
              AP +   A     AV L
Sbjct: 238 AQTAPTLIAKATSEAKAVGL 257

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>RLA0_METMA (Q8PY51) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 347

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 22/74 (29%), Positives = 35/74 (47%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + +L+KL I P   GL +   YD G+++ PE+L + E               +LS+  +Y
Sbjct: 175 ATMLSKLEIYPLIVGLDLRAAYDDGTIYEPELLAVDESKYFSDIIRAAQNAFNLSVNTAY 234

Query: 394 PTMAAAPHMFLNAY 353
           PT A    +   AY
Sbjct: 235 PTGATIGTLLAKAY 248

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>RLA0_ARCFU (O28781) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 339

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 21/79 (26%), Positives = 40/79 (50%)
 Frame = -1

Query: 565 LAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTM 386
           L +L I+P   GL +  + DSG + +PE L +  E +++ F     M  +L++  +Y T 
Sbjct: 175 LERLDIKPIKIGLDVKAMLDSGVILTPETLAIDTEKVLEDFQRAYQMALNLAVNSAYVTE 234

Query: 385 AAAPHMFLNAYKNVLAVAL 329
             A  + + A  +   +A+
Sbjct: 235 ETAEILIMKAVMDARNLAI 253

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>RLA0_SULSO (P96039) Acidic ribosomal protein P0 homolog (L10E) (Ribosomal|
           protein L10)
          Length = 338

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 26/84 (30%), Positives = 34/84 (40%)
 Frame = -1

Query: 568 LLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPT 389
           +L KLGI P    L I   Y  G V   E L L  E              +L++ I+YPT
Sbjct: 179 ILQKLGIMPVYVKLKIKVAYHEGLVIPAESLKLDLEGYRSNITEAYRNAFTLAVEIAYPT 238

Query: 388 MAAAPHMFLNAYKNVLAVALETDY 317
                      +KN +A+A E  Y
Sbjct: 239 PDVLKFTISKVFKNAIALASEIGY 262

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>RLA0_METAC (Q8TI80) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 347

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 20/73 (27%), Positives = 34/73 (46%)
 Frame = -1

Query: 574 SALLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISY 395
           + +L+KL I P   GL +   YD G+++ PE+L + E               +LS+  ++
Sbjct: 175 ATMLSKLEIYPLIVGLDLRAAYDDGTIYEPELLAVDESKYFSDIIRAAQNAFNLSVNTAF 234

Query: 394 PTMAAAPHMFLNA 356
           PT A    +   A
Sbjct: 235 PTSATISTLLAKA 247

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>RLA0_THEAC (P57692) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 314

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 25/96 (26%), Positives = 45/96 (46%)
 Frame = -1

Query: 568 LLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPT 389
           +L  L I+P   GL +  +Y  G V+S EVL LT E + +  A+  S   +++ +  +  
Sbjct: 171 ILEMLEIKPLEVGLQLLGLYSEGVVYSKEVLSLTPERIANDMAAAFSQAKAIAKSSMFFV 230

Query: 388 MAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 281
                 +   A     A+AL   +  +  D +K++L
Sbjct: 231 DEVLRDLLAEAKIKADALALAGQFITE--DNVKDFL 264

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>RLA0_SULAC (P35023) Acidic ribosomal protein P0 homolog (L10E) (Ribosomal|
           protein L10)
          Length = 335

 Score = 36.6 bits (83), Expect = 0.052
 Identities = 23/84 (27%), Positives = 37/84 (44%)
 Frame = -1

Query: 568 LLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPT 389
           +L KLGI P    L I   YD+G +   + L +  +D  ++         +++  I+YP 
Sbjct: 178 ILQKLGIMPVYVKLNIKIAYDNGVIIPGDKLSINLDDYTNEIRKAHINAFAVATEIAYPE 237

Query: 388 MAAAPHMFLNAYKNVLAVALETDY 317
                     A +N LA+A E  Y
Sbjct: 238 PKVLEFTATKAMRNALALASEIGY 261

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>RLA0_SULTO (Q971J2) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 337

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 22/84 (26%), Positives = 34/84 (40%)
 Frame = -1

Query: 568 LLAKLGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPT 389
           +L KLGI P    L I   YD+G +     L +  +D              L++ I+YP 
Sbjct: 179 ILQKLGIMPVHIKLNIKVAYDNGLIIPGNQLSINLDDYKTDIMKAYQSAFGLAVEIAYPI 238

Query: 388 MAAAPHMFLNAYKNVLAVALETDY 317
                     A +N L++A E  +
Sbjct: 239 PDVLKVSAEKAARNALSLAAEIGF 262

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>YBH7_YEAST (P38183) Very hypothetical 16.3 kDa protein in NUP170-ILS1|
           intergenic region
          Length = 143

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
 Frame = -1

Query: 529 LVICNVYDSGSVFSPEVLDLTEEDLM---DKFASGVSMVASLSLAISYPT----MAAAPH 371
           L+ C+    GSVF P  L +++  ++    K +  ++  + +SL  SY T    +A+ PH
Sbjct: 62  LIDCSSSPIGSVFEPSYLAMSDLQVLLNISKCSLTMASKSIVSLTNSYSTKTSSVASKPH 121

Query: 370 MFLN 359
            FLN
Sbjct: 122 FFLN 125

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>PITX2_RAT (Q9R0W1) Pituitary homeobox 2 (rPtx2)|
          Length = 324

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
 Frame = -2

Query: 558 SLVSAP---SHMDWSSAM---SMTVGQSSAPRFLTSLRKI*WTSLLLVFPWLPHCPWRSH 397
           S+ S P   S M  SS+M   ++T    S+   L +L  +   SL    P  P CP+   
Sbjct: 216 SMFSPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVP-TPACPYAPP 274

Query: 396 TPPWLLHRTCSSMHTRMFLRS 334
           TPP++   TC+S    + L++
Sbjct: 275 TPPYVYRDTCNSSLASLRLKA 295

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>PITX2_MOUSE (P97474) Pituitary homeobox 2 (Orthodenticle-like homeobox 2)|
           (Solurshin) (ALL1-responsive protein ARP1) (BRX1
           homeoprotein) (Paired-like homeodomain transcription
           factor Munc 30)
          Length = 317

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
 Frame = -2

Query: 558 SLVSAP---SHMDWSSAM---SMTVGQSSAPRFLTSLRKI*WTSLLLVFPWLPHCPWRSH 397
           S+ S P   S M  SS+M   ++T    S+   L +L  +   SL    P  P CP+   
Sbjct: 209 SMFSPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVP-TPACPYAPP 267

Query: 396 TPPWLLHRTCSSMHTRMFLRS 334
           TPP++   TC+S    + L++
Sbjct: 268 TPPYVYRDTCNSSLASLRLKA 288

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>PITX2_HUMAN (Q99697) Pituitary homeobox 2 (RIEG bicoid-related homeobox|
           transcription factor) (Solurshin) (ALL1-responsive
           protein ARP1)
          Length = 317

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
 Frame = -2

Query: 558 SLVSAP---SHMDWSSAM---SMTVGQSSAPRFLTSLRKI*WTSLLLVFPWLPHCPWRSH 397
           S+ S P   S M  SS+M   ++T    S+   L +L  +   SL    P  P CP+   
Sbjct: 209 SMFSPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVP-TPACPYAPP 267

Query: 396 TPPWLLHRTCSSMHTRMFLRS 334
           TPP++   TC+S    + L++
Sbjct: 268 TPPYVYRDTCNSSLASLRLKA 288


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,250,417
Number of Sequences: 219361
Number of extensions: 1281297
Number of successful extensions: 3500
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 3407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3492
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result