ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4n11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK109790.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
3dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
4dbj|AK066533.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
5gb|U89510.1|HVU89510 Hordeum vulgare b-keto acyl reductase (glos... 46 0.11
6gb|AC093926.6| Genomic sequence for Mus musculus, clone RP23-342... 42 1.7
7dbj|AK032556.1| Mus musculus adult male olfactory brain cDNA, RI... 42 1.7
8dbj|AP001894.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.7
9dbj|AP002795.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.7
10gb|AC159308.4| Mus musculus BAC clone RP23-187B11 from chromosom... 42 1.7
11gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 6.9
12gb|AC182645.3| Pan troglodytes BAC clone CH251-7F19 from chromos... 40 6.9
13gb|AC140364.4| Mus musculus BAC clone RP24-75K5 from chromosome ... 40 6.9
14gb|AC167723.3| Mus musculus BAC RP23-297A10 (Roswell Park Cance... 40 6.9
15gb|AC140437.3| Mus musculus BAC clone RP23-88N2 from chromosome ... 40 6.9
16gb|AC133957.2| Mus musculus BAC clone RP23-367D8 from chromosome... 40 6.9
17gb|AC122911.4| Mus musculus BAC clone RP23-60K16 from 8, complet... 40 6.9
18gb|AC126048.3| Mus musculus BAC clone RP23-207O12 from 3, comple... 40 6.9
19gb|AC145764.2| Gasterosteus aculeatus clone CH213-118A19, comple... 40 6.9
20gb|AF036092.3| Bovine adenovirus 4 strain THT/62, complete genome 40 6.9
21emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS... 40 6.9
22emb|AL713914.10| Mouse DNA sequence from clone RP24-293E17 on ch... 40 6.9
23emb|AL109630.2|DMBR7A4 Drosophila melanogaster BAC clone BACR7A4 40 6.9
24gb|AC009930.7| Homo sapiens chromosome 8, clone RP11-114O8, comp... 40 6.9
25gb|AC097726.4| Drosophila melanogaster X BAC RP98-5N14 (Roswell ... 40 6.9
26ref|NM_130513.2| Drosophila melanogaster CG3711-RA, transcript v... 40 6.9
27ref|NM_001038730.1| Drosophila melanogaster CG3711-RB, transcrip... 40 6.9
28gb|AC182491.2| Pan troglodytes BAC clone CH251-394K8 from chromo... 40 6.9
29gb|AY069715.1| Drosophila melanogaster LP01394 full length cDNA 40 6.9
30gb|AC155644.7| Mus musculus 10 BAC RP24-435P22 (Roswell Park Can... 40 6.9
31gb|AC087897.32| Homo sapiens 12 BAC RP11-804F13 (Roswell Park Ca... 40 6.9
32gb|AC175664.2| Mus musculus BAC clone RP24-391A3 from chromosome... 40 6.9
33gb|AC104946.4| Homo sapiens chromosome 8, clone RP11-946L20, com... 40 6.9
34gb|AE003419.2| Drosophila melanogaster chromosome X, section 3 o... 40 6.9
35gb|AC118202.8| Mus musculus chromosome 10, clone RP23-378J3, com... 40 6.9
36gb|AC140466.3| Mus musculus BAC clone RP24-392F9 from 6, complet... 40 6.9
37gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome 40 6.9
38dbj|AP004581.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.9
39emb|AL513351.26| Mouse DNA sequence from clone RP23-122P5 on chr... 40 6.9
40gb|AF418348.1| HIV-1 isolate 93USPIC1010a26 from USA gag protein... 40 6.9 
>dbj|AK109790.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D07, full
           insert sequence
          Length = 1393

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                       
Query: 422 gtcatgttggtctccacgaacaacggcgcctgacattgtacatcgattcctttgcccctg 481
           |||||||||||| ||||||||| ||| ||||||||||| || ||||||||||||| | ||
Sbjct: 823 gtcatgttggtcgccacgaacagcggagcctgacattgcacgtcgattcctttgctcttg 764

                                        
Query: 482 tactcaacgtgaaggctcctggacaactc 510
           || || |||| ||||||||| || |||||
Sbjct: 763 tattccacgtaaaggctcctcgagaactc 735
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                            
Query: 450      cctgacattgtacatcgattcctttgcccctgtactcaacgtgaaggctcctggacaact 509
                |||||||||| || ||||||||||||| | |||| || |||| ||||||||| || ||||
Sbjct: 11016383 cctgacattgcacgtcgattcctttgctcttgtattccacgtaaaggctcctcgagaact 11016442

                 
Query: 510      c 510
                |
Sbjct: 11016443 c 11016443



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                         
Query: 274      gcaccactggagccggtgtcccaggttaggcatgcacagcgtgccatgcccgatcca 330
                ||||||||| |||||||| |  ||||| |||||||||| || ||| |||||||||||
Sbjct: 11013551 gcaccactgcagccggtggcagaggttgggcatgcacaccgcgccgtgcccgatcca 11013607



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 422      gtcatgttggtctccacgaacaacggcgcctg 453
                |||||||||||| ||||||||| ||| |||||
Sbjct: 11013738 gtcatgttggtcgccacgaacagcggagcctg 11013769
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>dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0501G08
          Length = 173505

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                          
Query: 450    cctgacattgtacatcgattcctttgcccctgtactcaacgtgaaggctcctggacaact 509
              |||||||||| || ||||||||||||| | |||| || |||| ||||||||| || ||||
Sbjct: 100465 cctgacattgcacgtcgattcctttgctcttgtattccacgtaaaggctcctcgagaact 100524

               
Query: 510    c 510
              |
Sbjct: 100525 c 100525



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                      
Query: 274   gcaccactggagccggtgtcccaggttaggcatgcacagcgtgccatgcccgatcca 330
             ||||||||| |||||||| |  ||||| |||||||||| || ||| |||||||||||
Sbjct: 97633 gcaccactgcagccggtggcagaggttgggcatgcacaccgcgccgtgcccgatcca 97689



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 422   gtcatgttggtctccacgaacaacggcgcctg 453
             |||||||||||| ||||||||| ||| |||||
Sbjct: 97820 gtcatgttggtcgccacgaacagcggagcctg 97851
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>dbj|AK066533.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073H04, full
           insert sequence
          Length = 1345

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 431 gtctccacgaacaacggcgcctgacattgtacatcgattcctttgcccctgtactcaacg 490
           ||||||||||| ||||||| ||| ||||| |||| ||| ||||||  |   ||||| |||
Sbjct: 806 gtctccacgaagaacggcgtctggcattgcacatggatccctttgttcgcatactcgacg 747

                              
Query: 491 tgaaggctcctggacaact 509
           |||||||||| ||| ||||
Sbjct: 746 tgaaggctccgggagaact 728
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>gb|U89510.1|HVU89510 Hordeum vulgare b-keto acyl reductase (glossy8) mRNA, complete cds
          Length = 1138

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 435 ccacgaacaacggcgcctgacattgtacatcgattcctttgcccctgtactcaac 489
           ||||| |||| ||| |||| |||||||||||||| || || ||| ||||||||||
Sbjct: 794 ccacgtacaagggcacctggcattgtacatcgatgcccttacccttgtactcaac 740
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>gb|AC093926.6| Genomic sequence for Mus musculus, clone RP23-342N3, complete sequence
          Length = 210913

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 280    ctggagccggtgtcccaggtt 300
              |||||||||||||||||||||
Sbjct: 193292 ctggagccggtgtcccaggtt 193312
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>dbj|AK032556.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
           enriched library, clone:6430594J02 product:HYPOTHETICAL
           54.0 KDA PROTEIN homolog [Mus musculus] and Zinc finger,
           C2H2 type, full insert sequence
          Length = 2486

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 280 ctggagccggtgtcccaggtt 300
           |||||||||||||||||||||
Sbjct: 37  ctggagccggtgtcccaggtt 57
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>dbj|AP001894.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-606E8, complete
              sequence
          Length = 151452

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 277    ccactggagccggtgtcccaggttaggca 305
              |||||||||| |||| |||||||||||||
Sbjct: 138748 ccactggagctggtggcccaggttaggca 138720
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>dbj|AP002795.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-715G18, complete
            sequence
          Length = 165240

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 277  ccactggagccggtgtcccaggttaggca 305
            |||||||||| |||| |||||||||||||
Sbjct: 5691 ccactggagctggtggcccaggttaggca 5663
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>gb|AC159308.4| Mus musculus BAC clone RP23-187B11 from chromosome 9, complete sequence
          Length = 217927

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 280    ctggagccggtgtcccaggtt 300
              |||||||||||||||||||||
Sbjct: 188573 ctggagccggtgtcccaggtt 188553
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 154    gttgacgacggttggccgtgatgc 177
              ||||||| ||||||||||||||||
Sbjct: 480933 gttgacggcggttggccgtgatgc 480910
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>gb|AC182645.3| Pan troglodytes BAC clone CH251-7F19 from chromosome 10, complete
              sequence
          Length = 221731

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 489    cgtgaaggctcctggacaac 508
              ||||||||||||||||||||
Sbjct: 185817 cgtgaaggctcctggacaac 185798
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>gb|AC140364.4| Mus musculus BAC clone RP24-75K5 from chromosome 5, complete sequence
          Length = 234652

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    cacatatatttccaacatat 71
             ||||||||||||||||||||
Sbjct: 41204 cacatatatttccaacatat 41223
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>gb|AC167723.3| Mus musculus  BAC RP23-297A10 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 196622

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 51     acacatatatttccaacatataca 74
              ||||||||||||||||| ||||||
Sbjct: 127696 acacatatatttccaacctataca 127673
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>gb|AC140437.3| Mus musculus BAC clone RP23-88N2 from chromosome 8, complete sequence
          Length = 171402

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     tccaacatatacaaggaaga 81
              ||||||||||||||||||||
Sbjct: 136907 tccaacatatacaaggaaga 136888
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>gb|AC133957.2| Mus musculus BAC clone RP23-367D8 from chromosome 3, complete sequence
          Length = 99713

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 75    aggaagatatgtgtacatgcacac 98
             ||||| ||||||||||||||||||
Sbjct: 98135 aggaaaatatgtgtacatgcacac 98158
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>gb|AC122911.4| Mus musculus BAC clone RP23-60K16 from 8, complete sequence
          Length = 150400

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   ggactctctgccataggttc 223
             ||||||||||||||||||||
Sbjct: 77752 ggactctctgccataggttc 77771
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>gb|AC126048.3| Mus musculus BAC clone RP23-207O12 from 3, complete sequence
          Length = 188665

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 75     aggaagatatgtgtacatgcacac 98
              ||||| ||||||||||||||||||
Sbjct: 174415 aggaaaatatgtgtacatgcacac 174392
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>gb|AC145764.2| Gasterosteus aculeatus clone CH213-118A19, complete sequence
          Length = 192556

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   ttctgaggcgctggaaacgg 205
             ||||||||||||||||||||
Sbjct: 50355 ttctgaggcgctggaaacgg 50374
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>gb|AF036092.3| Bovine adenovirus 4 strain THT/62, complete genome
          Length = 31301

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 8     agttgatacatatgatgaaaatgt 31
             ||||||||| ||||||||||||||
Sbjct: 15693 agttgatacttatgatgaaaatgt 15716
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>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces
              hansenii
          Length = 1349926

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 449    gcctgacattgtacatcgattcct 472
              |||||| |||||||||||||||||
Sbjct: 819077 gcctgatattgtacatcgattcct 819100
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>emb|AL713914.10| Mouse DNA sequence from clone RP24-293E17 on chromosome 11 Contains
            the 3' end of the Cobl gene for cordon-bleu and a novel
            gene, complete sequence
          Length = 188406

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  tgtttgccagttacacatcc 150
            ||||||||||||||||||||
Sbjct: 6728 tgtttgccagttacacatcc 6747
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>emb|AL109630.2|DMBR7A4 Drosophila melanogaster BAC clone BACR7A4
          Length = 212370

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     tatatttccaacatatacaa 75
              ||||||||||||||||||||
Sbjct: 100891 tatatttccaacatatacaa 100910
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>gb|AC009930.7| Homo sapiens chromosome 8, clone RP11-114O8, complete sequence
          Length = 165662

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 83     atgtgtacatgcacaccatcgaat 106
              ||||||||||||||||||| ||||
Sbjct: 151522 atgtgtacatgcacaccatggaat 151545
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>gb|AC097726.4| Drosophila melanogaster X BAC RP98-5N14 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 146717

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     tatatttccaacatatacaa 75
              ||||||||||||||||||||
Sbjct: 101260 tatatttccaacatatacaa 101279
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>ref|NM_130513.2| Drosophila melanogaster CG3711-RA, transcript variant A (CG3711),
            mRNA
          Length = 4038

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   tatatttccaacatatacaa 75
            ||||||||||||||||||||
Sbjct: 3727 tatatttccaacatatacaa 3708
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>ref|NM_001038730.1| Drosophila melanogaster CG3711-RB, transcript variant B (CG3711),
            mRNA
          Length = 4093

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   tatatttccaacatatacaa 75
            ||||||||||||||||||||
Sbjct: 3782 tatatttccaacatatacaa 3763
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>gb|AC182491.2| Pan troglodytes BAC clone CH251-394K8 from chromosome 10, complete
             sequence
          Length = 168541

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   cgtgaaggctcctggacaac 508
             ||||||||||||||||||||
Sbjct: 29403 cgtgaaggctcctggacaac 29384
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>gb|AY069715.1| Drosophila melanogaster LP01394 full length cDNA
          Length = 4110

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   tatatttccaacatatacaa 75
            ||||||||||||||||||||
Sbjct: 3782 tatatttccaacatatacaa 3763
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>gb|AC155644.7| Mus musculus 10 BAC RP24-435P22 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 161533

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    agatatgtgtacatgcacac 98
             ||||||||||||||||||||
Sbjct: 25087 agatatgtgtacatgcacac 25106
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>gb|AC087897.32| Homo sapiens 12 BAC RP11-804F13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181166

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 75     aggaagatatgtgtacatgcacac 98
              |||||||||||||||||| |||||
Sbjct: 109606 aggaagatatgtgtacatacacac 109629
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>gb|AC175664.2| Mus musculus BAC clone RP24-391A3 from chromosome 8, complete sequence
          Length = 168189

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     tccaacatatacaaggaaga 81
              ||||||||||||||||||||
Sbjct: 167172 tccaacatatacaaggaaga 167191
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>gb|AC104946.4| Homo sapiens chromosome 8, clone RP11-946L20, complete sequence
          Length = 200292

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 83    atgtgtacatgcacaccatcgaat 106
             ||||||||||||||||||| ||||
Sbjct: 73265 atgtgtacatgcacaccatggaat 73288
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>gb|AE003419.2| Drosophila melanogaster chromosome X, section 3 of 74 of the complete
             sequence
          Length = 306598

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    tatatttccaacatatacaa 75
             ||||||||||||||||||||
Sbjct: 77587 tatatttccaacatatacaa 77606
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>gb|AC118202.8| Mus musculus chromosome 10, clone RP23-378J3, complete sequence
          Length = 213862

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     agatatgtgtacatgcacac 98
              ||||||||||||||||||||
Sbjct: 178505 agatatgtgtacatgcacac 178524
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>gb|AC140466.3| Mus musculus BAC clone RP24-392F9 from 6, complete sequence
          Length = 148392

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 51    acacatatatttccaacatataca 74
             ||||||||||||||||| ||||||
Sbjct: 33066 acacatatatttccaacctataca 33043
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>gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome
          Length = 1181404

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     aatatagattaacacatata 59
              ||||||||||||||||||||
Sbjct: 716952 aatatagattaacacatata 716933
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>dbj|AP004581.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1501B2, complete
              sequence
          Length = 141400

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 83     atgtgtacatgcacaccatcgaat 106
              ||||||||||||||||||| ||||
Sbjct: 102429 atgtgtacatgcacaccatggaat 102406
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>emb|AL513351.26| Mouse DNA sequence from clone RP23-122P5 on chromosome 1, complete
              sequence
          Length = 224628

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     agatatgtgtacatgcacac 98
              ||||||||||||||||||||
Sbjct: 110536 agatatgtgtacatgcacac 110517
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>gb|AF418348.1| HIV-1 isolate 93USPIC1010a26 from USA gag protein (gag) gene,
           partial cds
          Length = 396

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 40  aatatagattaacacatata 59
           ||||||||||||||||||||
Sbjct: 83  aatatagattaacacatata 102


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,253,387
Number of Sequences: 3902068
Number of extensions: 3253387
Number of successful extensions: 60122
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59999
Number of HSP's gapped (non-prelim): 122
length of query: 510
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 488
effective length of database: 17,147,199,772
effective search space: 8367833488736
effective search space used: 8367833488736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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