>gb|AY846822.1| Triticum aestivum ribosomal protein L11 mRNA, complete cds
          Length = 549

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 98  ccttcttagctcgcatgggacttgnngnggattacaccctcatactt 144
           ||||||||||||||||||||||||  | |||| |||||||| |||||
Sbjct: 549 ccttcttagctcgcatgggacttgttgaggatgacaccctcgtactt 503

>gb|BC040674.1| Homo sapiens neurofascin, mRNA (cDNA clone IMAGE:4817018)
          Length = 4919

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 57   caggngaacttaattaactcaag 79
            |||| ||||||||||||||||||
Sbjct: 3875 caggcgaacttaattaactcaag 3853

>emb|AL391822.12| Human DNA sequence from clone RP11-494K3 on chromosome 1 Contains the
             3' end of the gene for neurofascin (NFASC) and a ribosomal
             protein L13a (RPL13A) pseudogene, complete sequence
          Length = 115292

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 57    caggngaacttaattaactcaag 79
             |||| ||||||||||||||||||
Sbjct: 98680 caggcgaacttaattaactcaag 98658

>gb|AC134577.4| Mus musculus BAC clone RP24-79G11 from chromosome 14, complete sequence
          Length = 189085

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 9      gcaaaaagtgacaaagcaggttt 31
              ||||||||| |||||||||||||
Sbjct: 156422 gcaaaaagtaacaaagcaggttt 156444

>gb|AC122251.4| Mus musculus BAC clone RP23-167J15 from chromosome 14, complete
             sequence
          Length = 204588

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 9     gcaaaaagtgacaaagcaggttt 31
             ||||||||| |||||||||||||
Sbjct: 37552 gcaaaaagtaacaaagcaggttt 37574

>gb|AC117218.3| Mus musculus BAC clone RP23-344B4 from 15, complete sequence
          Length = 179858

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 30     ttctaggtaacatacatat 48
              |||||||||||||||||||
Sbjct: 160559 ttctaggtaacatacatat 160541

>emb|AL356278.8| Human DNA sequence from clone RP11-515J24 on chromosome 6, complete
             sequence
          Length = 182510

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 25    caggtttctaggtaacata 43
             |||||||||||||||||||
Sbjct: 77962 caggtttctaggtaacata 77944

>gb|AC005913.2| Homo sapiens Xp22-175-176 BAC GSHB-484O17 (Genome Systems Human BAC
             Library) complete sequence
          Length = 147124

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 30    ttctaggtaacatacatat 48
             |||||||||||||||||||
Sbjct: 36844 ttctaggtaacatacatat 36826

>gb|AC025265.21| Homo sapiens 12 BAC RP11-341G23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 180064

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 11    aaaaagtgacaaagcaggt 29
             |||||||||||||||||||
Sbjct: 28357 aaaaagtgacaaagcaggt 28339

>emb|BX927071.12| Zebrafish DNA sequence from clone DKEY-286O23 in linkage group 18,
              complete sequence
          Length = 143863

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 15     agtgacaaagcaggtttct 33
              |||||||||||||||||||
Sbjct: 102131 agtgacaaagcaggtttct 102149

>gb|AC011544.6|AC011544 Homo sapiens chromosome 19 clone LLNLR-264D11, complete sequence
          Length = 45903

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 7     aggcaaaaagtgacaaagc 25
             |||||||||||||||||||
Sbjct: 23788 aggcaaaaagtgacaaagc 23806

>gb|AC155307.2| Mus musculus BAC clone RP24-147F17 from 15, complete sequence
          Length = 190527

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 30    ttctaggtaacatacatat 48
             |||||||||||||||||||
Sbjct: 17612 ttctaggtaacatacatat 17594

>emb|CR855373.6| Zebrafish DNA sequence from clone CH73-124C24 in linkage group 18,
             complete sequence
          Length = 28461

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    agtgacaaagcaggtttct 33
             |||||||||||||||||||
Sbjct: 22603 agtgacaaagcaggtttct 22585

>emb|CR848439.2| Xenopus tropicalis finished cDNA, clone TEgg023p20
          Length = 1916

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 13 aaagtgacaaagcaggttt 31
          |||||||||||||||||||
Sbjct: 98 aaagtgacaaagcaggttt 80

>emb|CT025635.2| Pan troglodytes chromosome X clone RP43-046H06 map Xq28, complete
              sequence
          Length = 167178

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 30     ttctaggtaacatacatat 48
              |||||||||||||||||||
Sbjct: 118761 ttctaggtaacatacatat 118779

>emb|AL928726.5| Mouse DNA sequence from clone RP23-397A11 on chromosome 2, complete
             sequence
          Length = 120515

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    atacatatccagcaaccag 59
             |||||||||||||||||||
Sbjct: 45109 atacatatccagcaaccag 45127


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 914,372
Number of Sequences: 3902068
Number of extensions: 914372
Number of successful extensions: 52185
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52161
Number of HSP's gapped (non-prelim): 24
length of query: 146
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 125
effective length of database: 17,151,101,840
effective search space: 2143887730000
effective search space used: 2143887730000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)