ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags5b18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_480212.1| Oryza sativa (japonica cultivar-group), mRNA 200 4e-48
2dbj|AK111915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 4e-48
3dbj|AK111830.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 4e-48
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
5dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
6dbj|AK099775.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-16
7dbj|AK100136.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-16
8gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome... 92 3e-15
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 92 3e-15
10gb|AY104174.1| Zea mays PCO089382 mRNA sequence 62 2e-06
11gb|AC011467.7| Homo sapiens chromosome 19 clone CTC-457E21, comp... 48 0.035
12gb|AC118260.7| Mus musculus chromosome 5, clone RP24-374B14, com... 42 2.2
13gb|AF070013.1| Microtus ochrogaster truncated arginine vasopress... 42 2.2
14gb|AC129183.3| Mus musculus BAC clone RP23-350M13 from chromosom... 42 2.2
15gb|AC122027.1| Mus musculus BAC clone RP24-390L20 from 1, comple... 42 2.2
16gb|AY303171.1| Solanum bulbocastanum chromosome 8 clone 177O13, ... 42 2.2
17dbj|AK030169.1| Mus musculus adult male testis cDNA, RIKEN full-... 42 2.2
18gb|AC017006.4| Homo sapiens BAC clone RP11-110G2 from 2, complet... 42 2.2
19gb|AC114905.10| Mus musculus chromosome 1, clone RP24-127K21, co... 42 2.2
20gb|AC120136.9| Mus musculus chromosome 1, clone RP23-277E3, comp... 42 2.2
21gb|AC139186.4| Mus musculus BAC clone RP24-92D20 from 8, complet... 42 2.2
22gb|AC133456.11| Mus musculus chromosome 5, clone RP24-465G18, co... 40 8.6
23ref|NM_114071.2| Arabidopsis thaliana nucleotide binding AT3G335... 40 8.6
24gb|AC168117.2| Mus musculus BAC clone RP23-461G13 from chromosom... 40 8.6
25ref|XM_527296.1| PREDICTED: Pan troglodytes similar to zinc fing... 40 8.6
26gb|AY781778.1| Homo sapiens zinc finger protein 307 mRNA, comple... 40 8.6
27gb|AC154573.2| Mus musculus BAC clone RP23-398O19 from chromosom... 40 8.6
28gb|AC113328.5| Mus musculus chromosome 3, clone RP23-456E2, comp... 40 8.6
29gb|AC115301.7| Mus musculus BAC clone RP24-83E2 from chromosome ... 40 8.6
30gb|AC132335.3| Mus musculus BAC clone RP24-230C24 from chromosom... 40 8.6
31gb|AC146451.3| Pan troglodytes BAC clone RP43-1L21 from 7, compl... 40 8.6
32gb|AC144768.2| Mus musculus BAC clone RP23-24K24 from chromosome... 40 8.6
33gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome 40 8.6
34ref|NM_019110.3| Homo sapiens zinc finger protein 307 (ZNF307), ... 40 8.6
35ref|NM_024493.1| Homo sapiens zinc finger protein 306 (ZNF306), ... 40 8.6
36gb|AC116395.21| Mus musculus chromosome 14, clone RP23-106K9, co... 40 8.6
37gb|AC009992.7|ATAC009992 Arabidopsis thaliana chromosome III BAC... 40 8.6
38gb|AC140723.16| Mus musculus chromosome 16, clone RP23-346N4, co... 40 8.6
39gb|AC111141.7| Mus musculus chromosome 3, clone RP23-369G12, com... 40 8.6
40gb|AC165244.2| Mus musculus BAC clone RP24-498C9 from chromosome... 40 8.6
41gb|AC161223.4| Mus musculus chromosome 3, clone RP24-173A7, comp... 40 8.6
42emb|AL390035.10| Human DNA sequence from clone RP13-9D14 on chro... 40 8.6
43emb|AL359835.10| Human DNA sequence from clone RP11-191J5 on chr... 40 8.6
44gb|AC015920.14| Homo sapiens chromosome 17, clone CTD-3022L24, c... 40 8.6
45gb|AC164153.2| Mus musculus chromosome 3, clone RP23-370M4, comp... 40 8.6
46emb|AL022393.1|HSP373C6 Human DNA sequence from clone XX-P373C6 ... 40 8.6
47emb|AL021997.1|HS874C20 Human DNA sequence from clone RP5-874C20... 40 8.6
48gb|BT007427.1| Homo sapiens zinc finger protein 306 mRNA, comple... 40 8.6
49gb|BC014031.2| Homo sapiens zinc finger protein 307, mRNA (cDNA ... 40 8.6
50gb|AC140930.3| Mus musculus BAC clone RP23-116P20 from chromosom... 40 8.6
51gb|AC115085.4| Homo sapiens chromosome 17, clone RP11-280F10, co... 40 8.6
52emb|CR625010.1| full-length cDNA clone CS0DK008YF08 of HeLa cell... 40 8.6
53dbj|AK091225.1| Homo sapiens cDNA FLJ33906 fis, clone CTONG20084... 40 8.6
54dbj|AK056698.1| Homo sapiens cDNA FLJ32136 fis, clone PEBLM20003... 40 8.6
55gb|DQ103595.1| Arabidopsis arenosa clone BAC 28N14, complete seq... 40 8.6
56gb|AC008835.6| Homo sapiens chromosome 5 clone CTD-2148E3, compl... 40 8.6
57gb|AC154604.2| Mus musculus BAC clone RP23-348F20 from chromosom... 40 8.6
58gb|AC012497.8| Homo sapiens BAC clone RP11-349I7 from 2, complet... 40 8.6
59gb|AC005678.1|AC005678 Homo sapiens PAC clone RP11-569I24 from 7... 40 8.6
60gb|AC130390.4| Drosophila melanogaster X BAC RP98-21O19 (Roswell... 40 8.6
61gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome 40 8.6
62gb|AC156630.6| Mus musculus BAC clone RP24-556B7 from chromosome... 40 8.6
63gb|AY889927.1| Synthetic construct Homo sapiens clone FLH014828.... 40 8.6
64emb|Z55026.1|HS186C1R H.sapiens CpG island DNA genomic Mse1 frag... 40 8.6
65gb|BC006118.1| Homo sapiens zinc finger protein 306, mRNA (cDNA ... 40 8.6
66gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 ... 40 8.6
67gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosom... 40 8.6
68gb|AC132625.3| Mus musculus BAC clone RP23-101M7 from 1, complet... 40 8.6
69gb|AC131673.4| Mus musculus BAC clone RP23-321P21 from 1, comple... 40 8.6
70emb|AL954296.9| Mouse DNA sequence from clone RP23-272P2 on chro... 40 8.6
71emb|AL663068.12| Mouse DNA sequence from clone RP23-30J5 on chro... 40 8.6
72emb|AL732526.8| Mouse DNA sequence from clone RP23-338O4 on chro... 40 8.6 
>ref|XM_480212.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3453

 Score =  200 bits (101), Expect = 4e-48
 Identities = 236/281 (83%)
 Strand = Plus / Minus

                                                                        
Query: 349  ttgttagatgctgctggagctgatgacatgggcgggtgggctccgttatcctggggaggc 408
            ||||||| |||||| ||||| | ||| || |  ||||||| ||| || || || ||||||
Sbjct: 3440 ttgttagctgctgccggagccgctgatattgtggggtgggttccattgtcttgaggaggc 3381

                                                                        
Query: 409  gcaactccccactttgggtccgcgtccagtggctcaaccacatgaactgccccgtcgctc 468
            || ||||||||||||||||| | |||||  ||||| ||||||||||| || || ||||||
Sbjct: 3380 gccactccccactttgggtctgagtccaacggctccaccacatgaacagcaccatcgctc 3321

                                                                        
Query: 469  atgccaactgcaatctggttaggctccaagggatgcgcggctacaaccatggggtacaca 528
            ||||| || ||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 3320 atgccgaccgcaatctggttaggctccaagggatgcgcagcgacaaccatggggtaaaca 3261

                                                                        
Query: 529  cttgccccgctagatattgaaggaggcacataggcagaaagtgcaatcctgcaacgcagc 588
            ||| | || ||||| || ||||| || |  || |||||| |||| |||||||| ||||||
Sbjct: 3260 cttccaccactagacatggaaggtggtatgtatgcagaaggtgctatcctgcatcgcagc 3201

                                                     
Query: 589  ctaagggactcagcttcaaatactccaatagcaccatcaca 629
            ||||| ||||| ||||| || |||||||| |||||||||||
Sbjct: 3200 ctaagagactctgcttcgaagactccaattgcaccatcaca 3160
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>dbj|AK111915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131E20, full
            insert sequence
          Length = 1709

 Score =  200 bits (101), Expect = 4e-48
 Identities = 236/281 (83%)
 Strand = Plus / Minus

                                                                        
Query: 349  ttgttagatgctgctggagctgatgacatgggcgggtgggctccgttatcctggggaggc 408
            ||||||| |||||| ||||| | ||| || |  ||||||| ||| || || || ||||||
Sbjct: 1243 ttgttagctgctgccggagccgctgatattgtggggtgggttccattgtcttgaggaggc 1184

                                                                        
Query: 409  gcaactccccactttgggtccgcgtccagtggctcaaccacatgaactgccccgtcgctc 468
            || ||||||||||||||||| | |||||  ||||| ||||||||||| || || ||||||
Sbjct: 1183 gccactccccactttgggtctgagtccaacggctccaccacatgaacagcaccatcgctc 1124

                                                                        
Query: 469  atgccaactgcaatctggttaggctccaagggatgcgcggctacaaccatggggtacaca 528
            ||||| || ||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 1123 atgccgaccgcaatctggttaggctccaagggatgcgcagcgacaaccatggggtaaaca 1064

                                                                        
Query: 529  cttgccccgctagatattgaaggaggcacataggcagaaagtgcaatcctgcaacgcagc 588
            ||| | || ||||| || ||||| || |  || |||||| |||| |||||||| ||||||
Sbjct: 1063 cttccaccactagacatggaaggtggtatgtatgcagaaggtgctatcctgcatcgcagc 1004

                                                     
Query: 589  ctaagggactcagcttcaaatactccaatagcaccatcaca 629
            ||||| ||||| ||||| || |||||||| |||||||||||
Sbjct: 1003 ctaagagactctgcttcgaagactccaattgcaccatcaca 963



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 160  aagaaccaaaaactaatctagacatgccatcatca 194
            ||||||||||||||||| |||||||| ||||||||
Sbjct: 1467 aagaaccaaaaactaatttagacatgtcatcatca 1433



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 210  aaggagatggtgtggacttgatacatatcacctc 243
            ||||||||| |||||||||||||||| |||||||
Sbjct: 1397 aaggagatgctgtggacttgatacatttcacctc 1364



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 72   aaccaccactagctgggagcaggaaaagctttacaaagga 111
            ||||||||||||||  ||||  ||||||||||||||||||
Sbjct: 1584 aaccaccactagctcagagctagaaaagctttacaaagga 1545
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>dbj|AK111830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123A16, full
            insert sequence
          Length = 4466

 Score =  200 bits (101), Expect = 4e-48
 Identities = 236/281 (83%)
 Strand = Plus / Minus

                                                                        
Query: 349  ttgttagatgctgctggagctgatgacatgggcgggtgggctccgttatcctggggaggc 408
            ||||||| |||||| ||||| | ||| || |  ||||||| ||| || || || ||||||
Sbjct: 3946 ttgttagctgctgccggagccgctgatattgtggggtgggttccattgtcttgaggaggc 3887

                                                                        
Query: 409  gcaactccccactttgggtccgcgtccagtggctcaaccacatgaactgccccgtcgctc 468
            || ||||||||||||||||| | |||||  ||||| ||||||||||| || || ||||||
Sbjct: 3886 gccactccccactttgggtctgagtccaacggctccaccacatgaacagcaccatcgctc 3827

                                                                        
Query: 469  atgccaactgcaatctggttaggctccaagggatgcgcggctacaaccatggggtacaca 528
            ||||| || ||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 3826 atgccgaccgcaatctggttaggctccaagggatgcgcagcgacaaccatggggtaaaca 3767

                                                                        
Query: 529  cttgccccgctagatattgaaggaggcacataggcagaaagtgcaatcctgcaacgcagc 588
            ||| | || ||||| || ||||| || |  || |||||| |||| |||||||| ||||||
Sbjct: 3766 cttccaccactagacatggaaggtggtatgtatgcagaaggtgctatcctgcatcgcagc 3707

                                                     
Query: 589  ctaagggactcagcttcaaatactccaatagcaccatcaca 629
            ||||| ||||| ||||| || |||||||| |||||||||||
Sbjct: 3706 ctaagagactctgcttcgaagactccaattgcaccatcaca 3666



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 160  aagaaccaaaaactaatctagacatgccatcatca 194
            ||||||||||||||||| |||||||| ||||||||
Sbjct: 4170 aagaaccaaaaactaatttagacatgtcatcatca 4136



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 210  aaggagatggtgtggacttgatacatatcacctc 243
            ||||||||| |||||||||||||||| |||||||
Sbjct: 4100 aaggagatgctgtggacttgatacatttcacctc 4067



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 72   aaccaccactagctgggagcaggaaaagctttacaaagga 111
            ||||||||||||||  ||||  ||||||||||||||||||
Sbjct: 4287 aaccaccactagctcagagctagaaaagctttacaaagga 4248
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  149 bits (75), Expect = 1e-32
 Identities = 156/183 (85%)
 Strand = Plus / Minus

                                                                           
Query: 349     ttgttagatgctgctggagctgatgacatgggcgggtgggctccgttatcctggggaggc 408
               ||||||| |||||| ||||| | ||| || |  ||||||| ||| || || || ||||||
Sbjct: 3668908 ttgttagctgctgccggagccgctgatattgtggggtgggttccattgtcttgaggaggc 3668849

                                                                           
Query: 409     gcaactccccactttgggtccgcgtccagtggctcaaccacatgaactgccccgtcgctc 468
               || ||||||||||||||||| | |||||  ||||| ||||||||||| || || ||||||
Sbjct: 3668848 gccactccccactttgggtctgagtccaacggctccaccacatgaacagcaccatcgctc 3668789

                                                                           
Query: 469     atgccaactgcaatctggttaggctccaagggatgcgcggctacaaccatggggtacaca 528
               ||||| || ||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 3668788 atgccgaccgcaatctggttaggctccaagggatgcgcagcgacaaccatggggtaaaca 3668729

                  
Query: 529     ctt 531
               |||
Sbjct: 3668728 ctt 3668726



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                           
Query: 562     gcagaaagtgcaatcctgcaacgcagcctaagggactcagcttcaaatactccaatagca 621
               |||||| |||| |||||||| ||||||||||| ||||| ||||| || |||||||| |||
Sbjct: 3668579 gcagaaggtgctatcctgcatcgcagcctaagagactctgcttcgaagactccaattgca 3668520

                       
Query: 622     ccatcaca 629
               ||||||||
Sbjct: 3668519 ccatcaca 3668512



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                  
Query: 160     aagaaccaaaaactaatctagacatgccatcatca 194
               ||||||||||||||||| |||||||| ||||||||
Sbjct: 3669132 aagaaccaaaaactaatttagacatgtcatcatca 3669098



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 210     aaggagatggtgtggacttgatacatatcacctc 243
               ||||||||| |||||||||||||||| |||||||
Sbjct: 3669062 aaggagatgctgtggacttgatacatttcacctc 3669029



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                       
Query: 72      aaccaccactagctgggagcaggaaaagctttacaaagga 111
               ||||||||||||||  ||||  ||||||||||||||||||
Sbjct: 3669249 aaccaccactagctcagagctagaaaagctttacaaagga 3669210
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>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0577B11
          Length = 180355

 Score =  149 bits (75), Expect = 1e-32
 Identities = 156/183 (85%)
 Strand = Plus / Minus

                                                                          
Query: 349    ttgttagatgctgctggagctgatgacatgggcgggtgggctccgttatcctggggaggc 408
              ||||||| |||||| ||||| | ||| || |  ||||||| ||| || || || ||||||
Sbjct: 147414 ttgttagctgctgccggagccgctgatattgtggggtgggttccattgtcttgaggaggc 147355

                                                                          
Query: 409    gcaactccccactttgggtccgcgtccagtggctcaaccacatgaactgccccgtcgctc 468
              || ||||||||||||||||| | |||||  ||||| ||||||||||| || || ||||||
Sbjct: 147354 gccactccccactttgggtctgagtccaacggctccaccacatgaacagcaccatcgctc 147295

                                                                          
Query: 469    atgccaactgcaatctggttaggctccaagggatgcgcggctacaaccatggggtacaca 528
              ||||| || ||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 147294 atgccgaccgcaatctggttaggctccaagggatgcgcagcgacaaccatggggtaaaca 147235

                 
Query: 529    ctt 531
              |||
Sbjct: 147234 ctt 147232



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                          
Query: 562    gcagaaagtgcaatcctgcaacgcagcctaagggactcagcttcaaatactccaatagca 621
              |||||| |||| |||||||| ||||||||||| ||||| ||||| || |||||||| |||
Sbjct: 147085 gcagaaggtgctatcctgcatcgcagcctaagagactctgcttcgaagactccaattgca 147026

                      
Query: 622    ccatcaca 629
              ||||||||
Sbjct: 147025 ccatcaca 147018



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                 
Query: 160    aagaaccaaaaactaatctagacatgccatcatca 194
              ||||||||||||||||| |||||||| ||||||||
Sbjct: 147638 aagaaccaaaaactaatttagacatgtcatcatca 147604



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 210    aaggagatggtgtggacttgatacatatcacctc 243
              ||||||||| |||||||||||||||| |||||||
Sbjct: 147568 aaggagatgctgtggacttgatacatttcacctc 147535



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                      
Query: 72     aaccaccactagctgggagcaggaaaagctttacaaagga 111
              ||||||||||||||  ||||  ||||||||||||||||||
Sbjct: 147755 aaccaccactagctcagagctagaaaagctttacaaagga 147716
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>dbj|AK099775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095E22, full
            insert sequence
          Length = 4561

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 116/138 (84%), Gaps = 3/138 (2%)
 Strand = Plus / Minus

                                                                        
Query: 447  cacatgaactgccccgtcgctcatgccaactgcaatctggttaggctccaagggatgcgc 506
            |||||||||||| || ||||||||||| ||||||| ||||||||||| | ||||||||||
Sbjct: 4234 cacatgaactgcaccatcgctcatgccgactgcaaactggttaggcttccagggatgcgc 4175

                                                                        
Query: 507  ggctacaaccatggggtacacactt---gccccgctagatattgaaggaggcacataggc 563
             || ||||||||||| |||||| ||    | |||||||| | |||||  || | ||||||
Sbjct: 4174 agcgacaaccatgggatacacaatttcaccaccgctagaaactgaagatggtatataggc 4115

                              
Query: 564  agaaagtgcaatcctgca 581
            |||| |||||||||||||
Sbjct: 4114 agaaggtgcaatcctgca 4097
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>dbj|AK100136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010H12, full
            insert sequence
          Length = 4892

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 116/138 (84%), Gaps = 3/138 (2%)
 Strand = Plus / Minus

                                                                        
Query: 447  cacatgaactgccccgtcgctcatgccaactgcaatctggttaggctccaagggatgcgc 506
            |||||||||||| || ||||||||||| ||||||| ||||||||||| | ||||||||||
Sbjct: 4490 cacatgaactgcaccatcgctcatgccgactgcaaactggttaggcttccagggatgcgc 4431

                                                                        
Query: 507  ggctacaaccatggggtacacactt---gccccgctagatattgaaggaggcacataggc 563
             || ||||||||||| |||||| ||    | |||||||| | |||||  || | ||||||
Sbjct: 4430 agcgacaaccatgggatacacaatttcaccaccgctagaaactgaagatggtatataggc 4371

                              
Query: 564  agaaagtgcaatcctgca 581
            |||| |||||||||||||
Sbjct: 4370 agaaggtgcaatcctgca 4353
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>gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B04,
            complete sequence
          Length = 95383

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                        
Query: 447  cacatgaactgccccgtcgctcatgccaactgcaatctggttaggctccaagggatgcgc 506
            |||||||||||| || ||||||||||| ||||||| ||||||||||| | ||||||||||
Sbjct: 4719 cacatgaactgcaccatcgctcatgccgactgcaaactggttaggcttccagggatgcgc 4778

                                  
Query: 507  ggctacaaccatggggtacaca 528
             || ||||||||||| ||||||
Sbjct: 4779 agcgacaaccatgggatacaca 4800



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 558  ataggcagaaagtgcaatcctgca 581
            |||||||||| |||||||||||||
Sbjct: 4946 ataggcagaaggtgcaatcctgca 4969
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                           
Query: 447     cacatgaactgccccgtcgctcatgccaactgcaatctggttaggctccaagggatgcgc 506
               |||||||||||| || ||||||||||| ||||||| ||||||||||| | ||||||||||
Sbjct: 8426449 cacatgaactgcaccatcgctcatgccgactgcaaactggttaggcttccagggatgcgc 8426508

                                     
Query: 507     ggctacaaccatggggtacaca 528
                || ||||||||||| ||||||
Sbjct: 8426509 agcgacaaccatgggatacaca 8426530



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 558     ataggcagaaagtgcaatcctgca 581
               |||||||||| |||||||||||||
Sbjct: 8426676 ataggcagaaggtgcaatcctgca 8426699
to top
>gb|AY104174.1| Zea mays PCO089382 mRNA sequence
          Length = 1148

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 103/127 (81%)
 Strand = Plus / Minus

                                                                       
Query: 380 gcgggtgggctccgttatcctggggaggcgcaactccccactttgggtccgcgtccagtg 439
           ||||||| ||||| || ||||| ||||| ||   ||||||||| |||||| |||| | ||
Sbjct: 996 gcgggtgcgctccattgtcctgtggaggtgccgatccccacttcgggtccccgtctaatg 937

                                                                       
Query: 440 gctcaaccacatgaactgccccgtcgctcatgccaactgcaatctggttaggctccaagg 499
           |||| |||||||| ||    |||||||||||||| |  || |||||||||||||||| ||
Sbjct: 936 gctccaccacatggaccttgccgtcgctcatgccgatcgcgatctggttaggctccatgg 877

                  
Query: 500 gatgcgc 506
           | |||||
Sbjct: 876 ggtgcgc 870



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 571 gcaatcctgcaacgcagcctaagggactcagcttcaaatactccaatagcaccatcacag 630
           ||||||| ||| ||||||||||| || || ||||| || ||||| ||||||||||| |||
Sbjct: 802 gcaatccggcagcgcagcctaagagattctgcttcgaagactccgatagcaccatcgcag 743

             
Query: 631 aa 632
           ||
Sbjct: 742 aa 741
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>gb|AC011467.7| Homo sapiens chromosome 19 clone CTC-457E21, complete sequence
          Length = 187888

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 350    tgttagatgctgctggagctgatg 373
              ||||||||||||||||||||||||
Sbjct: 175595 tgttagatgctgctggagctgatg 175618
to top
>gb|AC118260.7| Mus musculus chromosome 5, clone RP24-374B14, complete sequence
          Length = 158892

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 174   aatctagacatgccatcatca 194
             |||||||||||||||||||||
Sbjct: 75666 aatctagacatgccatcatca 75686
to top
>gb|AF070013.1| Microtus ochrogaster truncated arginine vasopressin receptor 1a gene,
            complete cds
          Length = 4153

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 265  ctgtttctttctccctatctcctag 289
            |||||||| ||||||||||||||||
Sbjct: 1178 ctgtttctctctccctatctcctag 1202
to top
>gb|AC129183.3| Mus musculus BAC clone RP23-350M13 from chromosome 3, complete sequence
          Length = 201277

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 148    caaaaaacaaccaagaaccaaaaac 172
              |||||||||| ||||||||||||||
Sbjct: 125135 caaaaaacaaacaagaaccaaaaac 125111
to top
>gb|AC122027.1| Mus musculus BAC clone RP24-390L20 from 1, complete sequence
          Length = 150136

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 148   caaaaaacaaccaagaaccaaaaac 172
             |||||||||||||| ||||||||||
Sbjct: 51763 caaaaaacaaccaaaaaccaaaaac 51739
to top
>gb|AY303171.1| Solanum bulbocastanum chromosome 8 clone 177O13, complete sequence
          Length = 163635

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 604   tcaaatactccaatagcaccatcacagaa 632
             ||||||| |||||| ||||||||||||||
Sbjct: 44710 tcaaatattccaattgcaccatcacagaa 44682
to top
>dbj|AK030169.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4933408D05 product:weakly similar to
            SUMO-1/SMT3-SPECIFIC ISOPEPTIDASE 2 [Mus musculus], full
            insert sequence
          Length = 2424

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 148  caaaaaacaaccaagaaccaaaaac 172
            |||||||||||||| ||||||||||
Sbjct: 1611 caaaaaacaaccaacaaccaaaaac 1587
to top
>gb|AC017006.4| Homo sapiens BAC clone RP11-110G2 from 2, complete sequence
          Length = 191953

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 92    aggaaaagctttacaaaggaa 112
             |||||||||||||||||||||
Sbjct: 98757 aggaaaagctttacaaaggaa 98777
to top
>gb|AC114905.10| Mus musculus chromosome 1, clone RP24-127K21, complete sequence
          Length = 168918

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 149   aaaaaacaaccaagaaccaaaaact 173
             ||||||||||||| |||||||||||
Sbjct: 38523 aaaaaacaaccaaaaaccaaaaact 38547
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>gb|AC120136.9| Mus musculus chromosome 1, clone RP23-277E3, complete sequence
          Length = 190159

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 149    aaaaaacaaccaagaaccaaaaact 173
              ||||||||||||| |||||||||||
Sbjct: 177288 aaaaaacaaccaaaaaccaaaaact 177312
to top
>gb|AC139186.4| Mus musculus BAC clone RP24-92D20 from 8, complete sequence
          Length = 206436

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 148   caaaaaacaaccaagaaccaaaaac 172
             |||||||||||||| ||||||||||
Sbjct: 64038 caaaaaacaaccaacaaccaaaaac 64062
to top
>gb|AC133456.11| Mus musculus chromosome 5, clone RP24-465G18, complete sequence
          Length = 162210

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   caatcaccacctgtggcaag 212
             ||||||||||||||||||||
Sbjct: 43811 caatcaccacctgtggcaag 43792
to top
>ref|NM_114071.2| Arabidopsis thaliana nucleotide binding AT3G33530 mRNA, complete cds
          Length = 4259

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 602  cttcaaatactccaatagcaccat 625
            ||||||||||||||| ||||||||
Sbjct: 2194 cttcaaatactccaagagcaccat 2171
to top
>gb|AC168117.2| Mus musculus BAC clone RP23-461G13 from chromosome 17, complete
             sequence
          Length = 169205

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   caaccaagaaccaaaaacta 174
             ||||||||||||||||||||
Sbjct: 21980 caaccaagaaccaaaaacta 21961
to top
>ref|XM_527296.1| PREDICTED: Pan troglodytes similar to zinc finger protein 307;
           p373c6.1 (novel C2H2 type zinc finger protein)
           (LOC471918), mRNA
          Length = 1641

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 605 caaatactccaatagcacca 624
           ||||||||||||||||||||
Sbjct: 393 caaatactccaatagcacca 374
to top
>gb|AY781778.1| Homo sapiens zinc finger protein 307 mRNA, complete cds
          Length = 2428

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 605 caaatactccaatagcacca 624
           ||||||||||||||||||||
Sbjct: 679 caaatactccaatagcacca 660
to top
>gb|AC154573.2| Mus musculus BAC clone RP23-398O19 from chromosome 14, complete sequence
          Length = 197419

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    cgtcttttctcatgaatcta 262
              ||||||||||||||||||||
Sbjct: 138028 cgtcttttctcatgaatcta 138009
to top
>gb|AC113328.5| Mus musculus chromosome 3, clone RP23-456E2, complete sequence
          Length = 168421

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 268    tttctttctccctatctcct 287
              ||||||||||||||||||||
Sbjct: 164832 tttctttctccctatctcct 164813
to top
>gb|AC115301.7| Mus musculus BAC clone RP24-83E2 from chromosome 7, complete sequence
          Length = 175603

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 149    aaaaaacaaccaagaaccaaaaac 172
              ||||||||||||| ||||||||||
Sbjct: 110097 aaaaaacaaccaaaaaccaaaaac 110074
to top
>gb|AC132335.3| Mus musculus BAC clone RP24-230C24 from chromosome 10, complete sequence
          Length = 180642

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 149    aaaaaacaaccaagaaccaaaaac 172
              ||||||||||||| ||||||||||
Sbjct: 123246 aaaaaacaaccaaaaaccaaaaac 123223
to top
>gb|AC146451.3| Pan troglodytes BAC clone RP43-1L21 from 7, complete sequence
          Length = 161524

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 130    agattaagattttgggggcaaaaa 153
              ||||||| ||||||||||||||||
Sbjct: 102136 agattaatattttgggggcaaaaa 102113
to top
>gb|AC144768.2| Mus musculus BAC clone RP23-24K24 from chromosome 7, complete sequence
          Length = 230675

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 149   aaaaaacaaccaagaaccaaaaac 172
             ||||||||||||| ||||||||||
Sbjct: 23693 aaaaaacaaccaaaaaccaaaaac 23670
to top
>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome
          Length = 1044459

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     caaataaaggagcgtaaata 48
              ||||||||||||||||||||
Sbjct: 556574 caaataaaggagcgtaaata 556593
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>ref|NM_019110.3| Homo sapiens zinc finger protein 307 (ZNF307), mRNA
          Length = 2307

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 605 caaatactccaatagcacca 624
           ||||||||||||||||||||
Sbjct: 637 caaatactccaatagcacca 618
to top
>ref|NM_024493.1| Homo sapiens zinc finger protein 306 (ZNF306), mRNA
          Length = 2242

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 605 caaatactccaatagcacca 624
           ||||||||||||||||||||
Sbjct: 520 caaatactccaatagcacca 501
to top
>gb|AC116395.21| Mus musculus chromosome 14, clone RP23-106K9, complete sequence
          Length = 218656

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 149   aaaaaacaaccaagaaccaaaaac 172
             ||||||||||||| ||||||||||
Sbjct: 47864 aaaaaacaaccaaaaaccaaaaac 47887
to top
>gb|AC009992.7|ATAC009992 Arabidopsis thaliana chromosome III BAC T4P3 genomic sequence, complete
             sequence
          Length = 96583

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 602   cttcaaatactccaatagcaccat 625
             ||||||||||||||| ||||||||
Sbjct: 42641 cttcaaatactccaagagcaccat 42664
to top
>gb|AC140723.16| Mus musculus chromosome 16, clone RP23-346N4, complete sequence
          Length = 204252

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 612   tccaatagcaccatcacaga 631
             ||||||||||||||||||||
Sbjct: 78528 tccaatagcaccatcacaga 78509
to top
>gb|AC111141.7| Mus musculus chromosome 3, clone RP23-369G12, complete sequence
          Length = 241179

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    tttctttctccctatctcct 287
              ||||||||||||||||||||
Sbjct: 184531 tttctttctccctatctcct 184550
to top
>gb|AC165244.2| Mus musculus BAC clone RP24-498C9 from chromosome 14, complete sequence
          Length = 191747

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    cgtcttttctcatgaatcta 262
              ||||||||||||||||||||
Sbjct: 189826 cgtcttttctcatgaatcta 189845
to top
>gb|AC161223.4| Mus musculus chromosome 3, clone RP24-173A7, complete sequence
          Length = 156824

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 148   caaaaaacaaccaagaaccaaaaa 171
             |||||||||||||| |||||||||
Sbjct: 54135 caaaaaacaaccaaaaaccaaaaa 54112
to top
>emb|AL390035.10| Human DNA sequence from clone RP13-9D14 on chromosome X Contains the 5'
              end of gene KIAA2022 and a CpG island, complete sequence
          Length = 148057

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 268    tttctttctccctatctcct 287
              ||||||||||||||||||||
Sbjct: 143543 tttctttctccctatctcct 143524
to top
>emb|AL359835.10| Human DNA sequence from clone RP11-191J5 on chromosome 1q31.1-31.3
            Contains STSs and GSSs, complete sequence
          Length = 172747

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 548  aaggaggcacataggcagaaagtg 571
            |||||||||||||||| |||||||
Sbjct: 1122 aaggaggcacataggctgaaagtg 1145
to top
>gb|AC015920.14| Homo sapiens chromosome 17, clone CTD-3022L24, complete sequence
          Length = 150453

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   aagattttgggggcaaaaaa 154
             ||||||||||||||||||||
Sbjct: 56559 aagattttgggggcaaaaaa 56540
to top
>gb|AC164153.2| Mus musculus chromosome 3, clone RP23-370M4, complete sequence
          Length = 187100

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 268    tttctttctccctatctcct 287
              ||||||||||||||||||||
Sbjct: 186287 tttctttctccctatctcct 186268
to top
>emb|AL022393.1|HSP373C6 Human DNA sequence from clone XX-P373C6 on chromosome 6p21.31-21.33
           Contains the gene for a novel C2H2 type zinc finger
           protein, the ZNF193 gene for zinc finger protein 193, a
           TOB1 or 2 (transducer of ERBB2, 1 or 2) pseudogene, the
           3' end of a novel gene, two zinc finger protein
           pseudogenes and a CpG island, complete sequence
          Length = 85654

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 605 caaatactccaatagcacca 624
           ||||||||||||||||||||
Sbjct: 847 caaatactccaatagcacca 828
to top
>emb|AL021997.1|HS874C20 Human DNA sequence from clone RP5-874C20 on chromosome 6p22.1-22.3
            Contains the 5' end of a novel protein similar to zinc
            finger protein 306 (ZNF306, ZFP47), the gene for a novel
            C2H2 type zinc finger protein, a novel gene, a zinc
            finger protein SRE-ZBP pseudogene and a CpG island,
            complete sequence
          Length = 97847

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 605  caaatactccaatagcacca 624
            ||||||||||||||||||||
Sbjct: 4119 caaatactccaatagcacca 4138
to top
>gb|BT007427.1| Homo sapiens zinc finger protein 306 mRNA, complete cds
          Length = 1617

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 605 caaatactccaatagcacca 624
           ||||||||||||||||||||
Sbjct: 372 caaatactccaatagcacca 353
to top
>gb|BC014031.2| Homo sapiens zinc finger protein 307, mRNA (cDNA clone MGC:20459
           IMAGE:4336904), complete cds
          Length = 2307

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 605 caaatactccaatagcacca 624
           ||||||||||||||||||||
Sbjct: 637 caaatactccaatagcacca 618
to top
>gb|AC140930.3| Mus musculus BAC clone RP23-116P20 from chromosome 12, complete sequence
          Length = 201455

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 149    aaaaaacaaccaagaaccaaaaac 172
              ||||||||||| ||||||||||||
Sbjct: 106808 aaaaaacaacccagaaccaaaaac 106785
to top
>gb|AC115085.4| Homo sapiens chromosome 17, clone RP11-280F10, complete sequence
          Length = 163229

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   aagattttgggggcaaaaaa 154
             ||||||||||||||||||||
Sbjct: 34558 aagattttgggggcaaaaaa 34577
to top
>emb|CR625010.1| full-length cDNA clone CS0DK008YF08 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 2358

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 605 caaatactccaatagcacca 624
           ||||||||||||||||||||
Sbjct: 656 caaatactccaatagcacca 637
to top
>dbj|AK091225.1| Homo sapiens cDNA FLJ33906 fis, clone CTONG2008466, moderately
           similar to ZINC FINGER PROTEIN 165
          Length = 3572

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 605 caaatactccaatagcacca 624
           ||||||||||||||||||||
Sbjct: 588 caaatactccaatagcacca 569
to top
>dbj|AK056698.1| Homo sapiens cDNA FLJ32136 fis, clone PEBLM2000395, moderately
           similar to ZINC FINGER PROTEIN 165
          Length = 2180

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 605 caaatactccaatagcacca 624
           ||||||||||||||||||||
Sbjct: 677 caaatactccaatagcacca 658
to top
>gb|DQ103595.1| Arabidopsis arenosa clone BAC 28N14, complete sequence
          Length = 132056

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 602   cttcaaatactccaatagcaccat 625
             ||||||||||||||| ||||||||
Sbjct: 35649 cttcaaatactccaagagcaccat 35626
to top
>gb|AC008835.6| Homo sapiens chromosome 5 clone CTD-2148E3, complete sequence
          Length = 129046

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 130   agattaagattttgggggcaaaaa 153
             ||||||| ||||||||||||||||
Sbjct: 22910 agattaatattttgggggcaaaaa 22933
to top
>gb|AC154604.2| Mus musculus BAC clone RP23-348F20 from chromosome 17, complete
             sequence
          Length = 198374

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   caaccaagaaccaaaaacta 174
             ||||||||||||||||||||
Sbjct: 17109 caaccaagaaccaaaaacta 17128
to top
>gb|AC012497.8| Homo sapiens BAC clone RP11-349I7 from 2, complete sequence
          Length = 212104

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    tttctttctccctatctcct 287
              ||||||||||||||||||||
Sbjct: 183517 tttctttctccctatctcct 183536
to top
>gb|AC005678.1|AC005678 Homo sapiens PAC clone RP11-569I24 from 7, complete sequence
          Length = 187543

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 605   caaatactccaatagcacca 624
             ||||||||||||||||||||
Sbjct: 23654 caaatactccaatagcacca 23635
to top
>gb|AC130390.4| Drosophila melanogaster X BAC RP98-21O19 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 184175

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 467    tcatgccaactgcaatctgg 486
              ||||||||||||||||||||
Sbjct: 108784 tcatgccaactgcaatctgg 108765
to top
>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome
          Length = 1042519

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     caaataaaggagcgtaaata 48
              ||||||||||||||||||||
Sbjct: 553867 caaataaaggagcgtaaata 553886
to top
>gb|AC156630.6| Mus musculus BAC clone RP24-556B7 from chromosome 7, complete sequence
          Length = 205753

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 149   aaaaaacaaccaagaaccaaaaac 172
             ||||||||||||| ||||||||||
Sbjct: 76960 aaaaaacaaccaaaaaccaaaaac 76937
to top
>gb|AY889927.1| Synthetic construct Homo sapiens clone FLH014828.01X zinc finger
           protein 306 (ZNF306) mRNA, complete cds
          Length = 1617

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 605 caaatactccaatagcacca 624
           ||||||||||||||||||||
Sbjct: 372 caaatactccaatagcacca 353
to top
>emb|Z55026.1|HS186C1R H.sapiens CpG island DNA genomic Mse1 fragment, clone 186c1,
           reverse read cpg186c1.rt1b
          Length = 244

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 605 caaatactccaatagcacca 624
           ||||||||||||||||||||
Sbjct: 111 caaatactccaatagcacca 130
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>gb|BC006118.1| Homo sapiens zinc finger protein 306, mRNA (cDNA clone MGC:12997
           IMAGE:3505521), complete cds
          Length = 2242

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 605 caaatactccaatagcacca 624
           ||||||||||||||||||||
Sbjct: 520 caaatactccaatagcacca 501
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>gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 of 74 of the complete
              sequence
          Length = 318665

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 467    tcatgccaactgcaatctgg 486
              ||||||||||||||||||||
Sbjct: 135673 tcatgccaactgcaatctgg 135654
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>gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosome 10, complete sequence
          Length = 217425

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 149    aaaaaacaaccaagaaccaaaaac 172
              ||||||||||||| ||||||||||
Sbjct: 191787 aaaaaacaaccaaaaaccaaaaac 191764
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>gb|AC132625.3| Mus musculus BAC clone RP23-101M7 from 1, complete sequence
          Length = 183691

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   aaccaagaaccaaaaactaa 175
             ||||||||||||||||||||
Sbjct: 21615 aaccaagaaccaaaaactaa 21596
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>gb|AC131673.4| Mus musculus BAC clone RP23-321P21 from 1, complete sequence
          Length = 262190

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    aaccaagaaccaaaaactaa 175
              ||||||||||||||||||||
Sbjct: 216385 aaccaagaaccaaaaactaa 216366
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>emb|AL954296.9| Mouse DNA sequence from clone RP23-272P2 on chromosome X, complete
             sequence
          Length = 88296

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 149   aaaaaacaaccaagaaccaaaaac 172
             |||||| |||||||||||||||||
Sbjct: 42256 aaaaaaaaaccaagaaccaaaaac 42279
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>emb|AL663068.12| Mouse DNA sequence from clone RP23-30J5 on chromosome X, complete
             sequence
          Length = 225435

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 149   aaaaaacaaccaagaaccaaaaac 172
             ||||||||||||| ||||||||||
Sbjct: 24037 aaaaaacaaccaaaaaccaaaaac 24014
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>emb|AL732526.8| Mouse DNA sequence from clone RP23-338O4 on chromosome 2, complete
              sequence
          Length = 165825

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 432    gtccagtggctcaaccacat 451
              ||||||||||||||||||||
Sbjct: 119566 gtccagtggctcaaccacat 119585


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,877,990
Number of Sequences: 3902068
Number of extensions: 5877990
Number of successful extensions: 125328
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125085
Number of HSP's gapped (non-prelim): 239
length of query: 633
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 610
effective length of database: 17,143,297,704
effective search space: 10457411599440
effective search space used: 10457411599440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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