ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags5b17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF061838.1|AF061838 Zea mays strain W64A x A182E putative cytosolic 6-phosphogluconate dehydrogenase (pdh2) mRNA, complete cds Length = 1686 Score = 442 bits (223), Expect = e-121 Identities = 316/347 (91%) Strand = Plus / Minus Query: 282 atcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgcc 341 |||||| ||||||| |||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct: 1522 atcttgaaccactcggtgtggaaagagccaggcatgtcgaccctctcgtaggtgtgagcc 1463 Query: 342 ccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtaggag 401 ||||||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 1462 ccgaagtagtccctctgggcctgcaccaggttggcaggcagcctgtccctgcggtaggag 1403 Query: 402 tcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcgagg 461 |||||||||||||| || |||||||| || |||||||||||||||||||||||||||||| Sbjct: 1402 tcgaagtaggccaggctagcggacattcccggggtgctgacgccgttgttgatggcgagg 1343 Query: 462 cagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcggggtcg 521 || || ||||| | |||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 1342 cacaccaccctgcgccacgccgcctgcctgtccatgatctcctgcgcgaactcggggtct 1283 Query: 522 atgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgaggaag 581 | ||| ||| ||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 1282 acgagcaggctggcgaggcccgggttcctgtcgtaggccttcttgatgcggtccaggaag 1223 Query: 582 ctggcacggatgatgcacccgcccttccagatcctggccagctcgcc 628 |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1222 atggcgcggatgatgcacccgcccttccagatcctggccagctcgcc 1176
>gb|AY108834.1| Zea mays PCO144547 mRNA sequence Length = 1897 Score = 434 bits (219), Expect = e-118 Identities = 315/347 (90%) Strand = Plus / Minus Query: 282 atcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgcc 341 |||||| ||||||| |||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct: 1613 atcttgaaccactcggtgtggaaagagccaggcatgtcgaccctctcgtaggtgtgagcc 1554 Query: 342 ccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtaggag 401 ||||||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 1553 ccgaagtagtccctctgggcctgcaccaggttggcaggcagcctgtccctgcggtaggag 1494 Query: 402 tcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcgagg 461 |||||||||||||| || |||||||| || |||||||||||||||||||||||||||||| Sbjct: 1493 tcgaagtaggccaggctagcggacattcccggggtgctgacgccgttgttgatggcgagg 1434 Query: 462 cagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcggggtcg 521 || || ||||| | |||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 1433 cacaccaccctgcgccacgccgcctgcctgtccatgatctcctgcgcgaactcggggtct 1374 Query: 522 atgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgaggaag 581 | ||| ||| ||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 1373 acgagcaggctggcgaggcccgggttcctgtcgtaggccttcttgatgcggtccaggaag 1314 Query: 582 ctggcacggatgatgcacccgcccttccagatcctggccagctcgcc 628 |||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 1313 atggcgcggatgatgcacccgcccttccagatcctggcaagctcgcc 1267
>ref|XM_550483.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1549 Score = 426 bits (215), Expect = e-116 Identities = 314/347 (90%) Strand = Plus / Minus Query: 279 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 338 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1274 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 1215 Query: 339 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 398 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 1214 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 1155 Query: 399 gagtcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcg 458 ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1154 gagtcgaagtacgcgagactcgccgacatgcctggggtgctgacgccattgttgatggca 1095 Query: 459 aggcagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcgggg 518 |||||||| ||||| | ||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 1094 aggcagaccaccctgcgccatgccgcttgcctgtccatgatctcctgagcgaactcaggg 1035 Query: 519 tcgatgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgagg 578 || | ||| ||||||||||| || |||||||||||||||||||||||||||||| ||| Sbjct: 1034 tccacgagcaggttggcgaggtcggagttcctgtcgtaggccttcttgatgcggtccagg 975 Query: 579 aagctggcacggatgatgcacccgcccttccagatcctggccagctc 625 ||| ||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 974 aagatggcacggatgatgcaccctcccttccagatcctcgctagctc 928
>ref|NM_185393.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1758 Score = 426 bits (215), Expect = e-116 Identities = 314/347 (90%) Strand = Plus / Minus Query: 279 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 338 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1483 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 1424 Query: 339 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 398 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 1423 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 1364 Query: 399 gagtcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcg 458 ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1363 gagtcgaagtacgcgagactcgccgacatgcctggggtgctgacgccattgttgatggca 1304 Query: 459 aggcagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcgggg 518 |||||||| ||||| | ||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 1303 aggcagaccaccctgcgccatgccgcttgcctgtccatgatctcctgagcgaactcaggg 1244 Query: 519 tcgatgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgagg 578 || | ||| ||||||||||| || |||||||||||||||||||||||||||||| ||| Sbjct: 1243 tccacgagcaggttggcgaggtcggagttcctgtcgtaggccttcttgatgcggtccagg 1184 Query: 579 aagctggcacggatgatgcacccgcccttccagatcctggccagctc 625 ||| ||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 1183 aagatggcacggatgatgcaccctcccttccagatcctcgctagctc 1137
>gb|AF486280.2| Oryza sativa cytosolic 6-phosphogluconate dehydrogenase mRNA, complete cds Length = 1771 Score = 426 bits (215), Expect = e-116 Identities = 314/347 (90%) Strand = Plus / Minus Query: 279 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 338 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1476 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 1417 Query: 339 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 398 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 1416 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 1357 Query: 399 gagtcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcg 458 ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1356 gagtcgaagtacgcgagactcgccgacatgcctggggtgctgacgccattgttgatggca 1297 Query: 459 aggcagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcgggg 518 |||||||| ||||| | ||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 1296 aggcagaccaccctgcgccatgccgcttgcctgtccatgatctcctgagcgaactcaggg 1237 Query: 519 tcgatgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgagg 578 || | ||| ||||||||||| || |||||||||||||||||||||||||||||| ||| Sbjct: 1236 tccacgagcaggttggcgaggtcggagttcctgtcgtaggccttcttgatgcggtccagg 1177 Query: 579 aagctggcacggatgatgcacccgcccttccagatcctggccagctc 625 ||| ||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 1176 aagatggcacggatgatgcaccctcccttccagatcctcgctagctc 1130
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 426 bits (215), Expect = e-116 Identities = 314/347 (90%) Strand = Plus / Minus Query: 279 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 338 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 645444 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 645385 Query: 339 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 398 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 645384 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 645325 Query: 399 gagtcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcg 458 ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 645324 gagtcgaagtacgcgagactcgccgacatgcctggggtgctgacgccattgttgatggca 645265 Query: 459 aggcagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcgggg 518 |||||||| ||||| | ||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 645264 aggcagaccaccctgcgccatgccgcttgcctgtccatgatctcctgagcgaactcaggg 645205 Query: 519 tcgatgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgagg 578 || | ||| ||||||||||| || |||||||||||||||||||||||||||||| ||| Sbjct: 645204 tccacgagcaggttggcgaggtcggagttcctgtcgtaggccttcttgatgcggtccagg 645145 Query: 579 aagctggcacggatgatgcacccgcccttccagatcctggccagctc 625 ||| ||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 645144 aagatggcacggatgatgcaccctcccttccagatcctcgctagctc 645098
>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC clone:P0029D06 Length = 150120 Score = 426 bits (215), Expect = e-116 Identities = 314/347 (90%) Strand = Plus / Minus Query: 279 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 338 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 51872 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 51813 Query: 339 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 398 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 51812 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 51753 Query: 399 gagtcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcg 458 ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 51752 gagtcgaagtacgcgagactcgccgacatgcctggggtgctgacgccattgttgatggca 51693 Query: 459 aggcagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcgggg 518 |||||||| ||||| | ||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 51692 aggcagaccaccctgcgccatgccgcttgcctgtccatgatctcctgagcgaactcaggg 51633 Query: 519 tcgatgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgagg 578 || | ||| ||||||||||| || |||||||||||||||||||||||||||||| ||| Sbjct: 51632 tccacgagcaggttggcgaggtcggagttcctgtcgtaggccttcttgatgcggtccagg 51573 Query: 579 aagctggcacggatgatgcacccgcccttccagatcctggccagctc 625 ||| ||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 51572 aagatggcacggatgatgcaccctcccttccagatcctcgctagctc 51526
>dbj|AK065920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047D08, full insert sequence Length = 1758 Score = 426 bits (215), Expect = e-116 Identities = 314/347 (90%) Strand = Plus / Minus Query: 279 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 338 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1483 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 1424 Query: 339 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 398 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 1423 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 1364 Query: 399 gagtcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcg 458 ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1363 gagtcgaagtacgcgagactcgccgacatgcctggggtgctgacgccattgttgatggca 1304 Query: 459 aggcagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcgggg 518 |||||||| ||||| | ||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 1303 aggcagaccaccctgcgccatgccgcttgcctgtccatgatctcctgagcgaactcaggg 1244 Query: 519 tcgatgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgagg 578 || | ||| ||||||||||| || |||||||||||||||||||||||||||||| ||| Sbjct: 1243 tccacgagcaggttggcgaggtcggagttcctgtcgtaggccttcttgatgcggtccagg 1184 Query: 579 aagctggcacggatgatgcacccgcccttccagatcctggccagctc 625 ||| ||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 1183 aagatggcacggatgatgcaccctcccttccagatcctcgctagctc 1137
>dbj|AK059699.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-C09, full insert sequence Length = 1549 Score = 426 bits (215), Expect = e-116 Identities = 314/347 (90%) Strand = Plus / Minus Query: 279 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 338 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1274 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 1215 Query: 339 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 398 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 1214 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 1155 Query: 399 gagtcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcg 458 ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1154 gagtcgaagtacgcgagactcgccgacatgcctggggtgctgacgccattgttgatggca 1095 Query: 459 aggcagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcgggg 518 |||||||| ||||| | ||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 1094 aggcagaccaccctgcgccatgccgcttgcctgtccatgatctcctgagcgaactcaggg 1035 Query: 519 tcgatgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgagg 578 || | ||| ||||||||||| || |||||||||||||||||||||||||||||| ||| Sbjct: 1034 tccacgagcaggttggcgaggtcggagttcctgtcgtaggccttcttgatgcggtccagg 975 Query: 579 aagctggcacggatgatgcacccgcccttccagatcctggccagctc 625 ||| ||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 974 aagatggcacggatgatgcaccctcccttccagatcctcgctagctc 928
>gb|AY104004.1| Zea mays PCO119210 mRNA sequence Length = 1864 Score = 341 bits (172), Expect = 2e-90 Identities = 301/344 (87%) Strand = Plus / Minus Query: 282 atcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgcc 341 |||||| ||||||| |||||||| || || |||||||| ||||||||||| ||||| || Sbjct: 1593 atcttgaaccactcggtgtggaaagaaccaggcatgtcaaccctctcgtacgtgtgagcg 1534 Query: 342 ccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtaggag 401 ||||||||||| ||||| ||||| || |||||||| |||||||| ||||| ||||| ||| Sbjct: 1533 ccgaagtagtctctctgagcctgcaccaggttggcgggaagcctatccctgcggtacgag 1474 Query: 402 tcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcgagg 461 ||||||||||||||||| || |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 1473 tcgaagtaggccagacttgcagacatgcctggggtgctaacgccattgttgatggcaagg 1414 Query: 462 cagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcggggtcg 521 ||||| ||||| | ||| || ||||||||||| ||||||||||| |||||||||||||| Sbjct: 1413 cagacaaccctgcgccaggcagcttgcctgtctatgatctcctgggcgaactcggggtca 1354 Query: 522 atgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgaggaag 581 | |||||||||||| || | | |||||| ||||| |||||||||||||||||||||||| Sbjct: 1353 acgaggaggttggcaaggttagggttcctatcgtacgccttcttgatgcggtcgaggaag 1294 Query: 582 ctggcacggatgatgcacccgcccttccagatcctggccagctc 625 ||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 1293 atggcacggatgatgcaccctcccttccagatcctcgctagctc 1250
>gb|AF061837.1|AF061837 Zea mays strain W64A x A182E putative cytosolic 6-phosphogluconate dehydrogenase (pdh1) mRNA, complete cds Length = 1818 Score = 321 bits (162), Expect = 2e-84 Identities = 276/314 (87%) Strand = Plus / Minus Query: 312 ggcatgtcgaccctctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgagg 371 |||||||| ||||||||||| ||||| || ||||||||||| ||||| ||||| || ||| Sbjct: 1459 ggcatgtcaaccctctcgtacgtgtgagcgccgaagtagtctctctgagcctgcaccagg 1400 Query: 372 ttggcaggaagcctgtccctccggtaggagtcgaagtaggccagactcgcggacatgccg 431 ||||| |||||||| ||||| ||||| |||||||||||||||||||| || |||||||| Sbjct: 1399 ttggcgggaagcctatccctgcggtacgagtcgaagtaggccagacttgcagacatgcct 1340 Query: 432 ggggtgctgacgccgttgttgatggcgaggcagacgaccctcctccacgcggcttgcctg 491 |||||||| ||||| ||||||||||| |||||||| ||||| | ||| || ||||||||| Sbjct: 1339 ggggtgctaacgccattgttgatggcaaggcagacaaccctgcgccaggcagcttgcctg 1280 Query: 492 tccatgatctcctgcgcgaactcggggtcgatgaggaggttggcgagctcaccgttcctg 551 || ||||||||||| |||||||||||||| | |||||||||||| || | | |||||| Sbjct: 1279 tctatgatctcctgggcgaactcggggtcaacgaggaggttggcaaggttagggttccta 1220 Query: 552 tcgtaggccttcttgatgcggtcgaggaagctggcacggatgatgcacccgcccttccag 611 ||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1219 tcgtacgccttcttgatgcggtcgaggaagatggcacggatgatgcaccctcccttccag 1160 Query: 612 atcctggccagctc 625 ||||| || ||||| Sbjct: 1159 atcctcgctagctc 1146
>gb|BT018534.1| Zea mays clone EL01N0435A08.d mRNA sequence Length = 1814 Score = 319 bits (161), Expect = 6e-84 Identities = 300/345 (86%), Gaps = 1/345 (0%) Strand = Plus / Minus Query: 282 atcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgcc 341 |||||| ||||||| |||||||| || || |||||||| ||||||||||| ||||| || Sbjct: 1539 atcttgaaccactcggtgtggaaagaaccaggcatgtcaaccctctcgtacgtgtgagcg 1480 Query: 342 ccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtaggag 401 ||||||||||| ||||| ||||| || |||||||| |||||||| ||||| ||||| ||| Sbjct: 1479 ccgaagtagtctctctgagcctgcaccaggttggcgggaagcctatccctgcggtacgag 1420 Query: 402 tcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcgagg 461 ||||||||||||||||| || |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 1419 tcgaagtaggccagacttgcagacatgcctggggtgctaacgccattgttgatggcaagg 1360 Query: 462 cagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcggggtcg 521 ||||| ||||| | ||| || ||||||||||| ||||||||||| |||||||||||||| Sbjct: 1359 cagacaaccctgcgccaggcagcttgcctgtctatgatctcctgggcgaactcggggtca 1300 Query: 522 atgaggaggttggcgagctcaccgttcctgtcgtaggcc-ttcttgatgcggtcgaggaa 580 | |||||||||||| || | | ||||| ||||| ||| |||||||||||||||||||| Sbjct: 1299 acgaggaggttggcaaggttaggtttcctatcgtacgcctttcttgatgcggtcgaggaa 1240 Query: 581 gctggcacggatgatgcacccgcccttccagatcctggccagctc 625 | ||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 1239 gatggcacggatgatgcaccctcccttccagatcctcgctagctc 1195
>gb|AF037036.1|AF037036 Zea mays 6-phosphogluconate dehydrogenase gene, partial cds Length = 1599 Score = 212 bits (107), Expect = 1e-51 Identities = 192/221 (86%) Strand = Plus / Minus Query: 282 atcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgcc 341 |||||| ||||||| |||||||| || || |||||||| ||||||||||| ||||| || Sbjct: 221 atcttgaaccactcggtgtggaaagaaccaggcatgtcaaccctctcgtacgtgtgagcg 162 Query: 342 ccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtaggag 401 ||||||||||| ||||| ||||| || |||||||| ||||||||||||| ||||| ||| Sbjct: 161 ccgaagtagtctctctgagcctgcaccaggttggcgggaagcctgtcccygcggtacgag 102 Query: 402 tcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcgagg 461 ||||||||||||||||| || |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 101 tcgaagtaggccagacttgcagacatgcctggggtgctaacgccattgttgatggcaagg 42 Query: 462 cagacgaccctcctccacgcggcttgcctgtccatgatctc 502 ||||| ||||| | ||| || ||||||||||| |||||||| Sbjct: 41 cagacaaccctgcgccaggcagcttgcctgtctatgatctc 1
>gb|AY108628.1| Zea mays PCO126621 mRNA sequence Length = 792 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 531 ttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgaggaagctggcacgg 590 |||||||||||| ||||||||||| || ||||||| | || ||||| || |||||| Sbjct: 205 ttggcgagctcaggattcctgtcgtacgcgctcttgatcctatcaaggaacctcgcacgg 146 Query: 591 atgatgcacccgcccttccagatcctggccagctc 625 || ||||| |||||||||||||||||||| ||||| Sbjct: 145 ataatgcagccgcccttccagatcctggcaagctc 111
>ref|NM_001009467.1| Ovis aries 6-phosphogluconate dehydrogenase (decarboxylating) (6-PGDH), mRNA Length = 1918 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 327 tcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggc 376 ||||||||||||||||| |||||||| | ||| ||||||| ||||||||| Sbjct: 1437 tcgtaggtgtgcgccccaaagtagtcgcgctgagcctggatgaggttggc 1388
>emb|X60195.1|OA6PDGH Ovine 6-pgdh mRNA for 6-phosphogluconate dehydrogenase Length = 1953 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 327 tcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggc 376 ||||||||||||||||| |||||||| | ||| ||||||| ||||||||| Sbjct: 1437 tcgtaggtgtgcgccccaaagtagtcgcgctgagcctggatgaggttggc 1388
>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence Length = 141360 Score = 58.0 bits (29), Expect = 4e-05 Identities = 239/309 (77%) Strand = Plus / Minus Query: 314 catgtcgaccctctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggtt 373 |||||| |||||||| || ||||| || || |||||||| || || || || || || || Sbjct: 82244 catgtcaaccctctcatatgtgtgagctccaaagtagtctctttgagcttgaaccagatt 82185 Query: 374 ggcaggaagcctgtccctccggtaggagtcgaagtaggccagactcgcggacatgccggg 433 || || | ||| ||||||| ||| ||||||||||| |||||||| || ||||| || || Sbjct: 82184 cgctggcaacctctccctcctgtacgagtcgaagtatgccagactggctgacattcccgg 82125 Query: 434 ggtgctgacgccgttgttgatggcgaggcagacgaccctcctccacgcggcttgcctgtc 493 ||||||| || ||| ||||| ||| | || || || ||||| |||| |||||| || Sbjct: 82124 tgtgctgattcccgagtttatggccagggacactactcttctccaagcggattgcctctc 82065 Query: 494 catgatctcctgcgcgaactcggggtcgatgaggaggttggcgagctcaccgttcctgtc 553 |||||||||| || |||||||| |||| || ||||| | || || ||||||||| Sbjct: 82064 gatgatctcctttgcaaactcgggatcgaccagaaggttcggcagttcggggttcctgtc 82005 Query: 554 gtaggccttcttgatgcggtcgaggaagctggcacggatgatgcacccgcccttccagat 613 || |||| |||||| | ||| ||||| |||| | ||||||||| || || |||||||| Sbjct: 82004 ataagcctgcttgatcctgtccaggaatatggctctgatgatgcatcctcctttccagat 81945 Query: 614 cctggccag 622 ||| ||||| Sbjct: 81944 ccttgccag 81936
>gb|AF307144.1|AF307144 Spinacia oleracea cytosolic 6-phosphogluconate dehydrogenase (pgdC) mRNA, complete cds Length = 1643 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 545 gttcctgtcgtaggccttcttgatgcggtcgaggaagctggcacggatgatgcacccgcc 604 ||||||||| || |||||||| || ||||| || || | |||||||||||||| || || Sbjct: 1254 gttcctgtcataagccttcttaatccggtccagaaacatagcacggatgatgcatccacc 1195 Query: 605 cttccagatcctggccagctc 625 |||||||||||| || ||||| Sbjct: 1194 cttccagatcctagctagctc 1174
>gb|AF394510.1| Phytophthora infestans 6-phosphogluconate dehydrogenase (gnd) mRNA, complete cds Length = 1654 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 583 tggcacggatgatgcacccgcccttccagat 613 |||||||||||||||| |||||||||||||| Sbjct: 1163 tggcacggatgatgcagccgcccttccagat 1133
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 550 tgtcgtaggccttcttgatgcggtcgaggaagctggcacggatgatgcacccgcc 604 |||||||||||| |||||| |||| |||||| | ||| ||||||||||| ||||| Sbjct: 1303754 tgtcgtaggcctccttgatccggttgaggaaccgggcgcggatgatgcagccgcc 1303700 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 327 tcgtaggtgtgcgccccgaagtagtccctctgggcctgg 365 ||||||||||| || ||||||||||| | |||||||||| Sbjct: 1303977 tcgtaggtgtgggcgccgaagtagtcgcgctgggcctgg 1303939
>dbj|AB086022.1| Selaginella remotifolia sr6pgd mRNA for cytosolic 6-phosphogluconate dehydrogenase, partial cds Length = 533 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 545 gttcctgtcgtaggccttcttgatgcggtcgaggaagctggcacggatgatgcacccgcc 604 ||||||||| || |||||||||||||| || || || |||| | ||| ||||| || || Sbjct: 300 gttcctgtcataagccttcttgatgcgatccagaaaaatggccctgataatgcaaccccc 241 Query: 605 cttccagatcctggc 619 ||||||||||||||| Sbjct: 240 cttccagatcctggc 226
>ref|XM_515670.1| PREDICTED: Pan troglodytes similar to 6-phosphogluconate dehydrogenase, decarboxylating (LOC459464), mRNA Length = 1794 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 383 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1352 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1299
>gb|BC000368.2| Homo sapiens phosphogluconate dehydrogenase, mRNA (cDNA clone MGC:8331 IMAGE:2819330), complete cds Length = 1901 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 383 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1401 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1348
>ref|NM_002631.2| Homo sapiens phosphogluconate dehydrogenase (PGD), mRNA Length = 1937 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 383 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1454 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1401
>gb|AY532646.1| Capsicum annuum 6-phosphogluconate dehydrogenase mRNA, partial cds Length = 374 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 324 ctctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 383 ||||| || ||||| |||||||| ||||||||||| ||||| || ||||| || |||||| Sbjct: 374 ctctcatatgtgtgagccccgaaatagtccctctgagcctgcacaaggtttgctggaagc 315 Query: 384 ct 385 || Sbjct: 314 ct 313
>gb|BT009740.1| Synthetic construct Homo sapiens phosphogluconate dehydrogenase mRNA, partial cds Length = 1452 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 383 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1364 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1311
>emb|AL162752.2|NMA1Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 1/7 Length = 340806 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 326 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 379 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 246079 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 246132
>emb|CR609478.1| full-length cDNA clone CS0DL007YL07 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1853 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 383 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1407 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1354
>emb|CR610891.1| full-length cDNA clone CS0DI028YE21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1855 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 383 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1404 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1351
>emb|CR610133.1| full-length cDNA clone CS0DI065YC03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1866 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 383 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1409 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1356
>emb|CR610062.1| full-length cDNA clone CS0DE012YD20 of Placenta of Homo sapiens (human) Length = 1849 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 383 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1409 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1356
>emb|CR608757.1| full-length cDNA clone CS0DI008YI13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1849 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 383 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1402 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1349
>emb|CR607764.1| full-length cDNA clone CS0DE005YC23 of Placenta of Homo sapiens (human) Length = 1877 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 383 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1409 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1356
>emb|CR604306.1| full-length cDNA clone CS0DI087YM04 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1811 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 383 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1360 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1307
>gb|U30255.1|HSU30255 Homo sapiens phosphogluconate dehydrogenase (PGDH) mRNA, complete cds Length = 1536 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 383 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1370 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1317
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 326 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 379 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 12261 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 12314
>gb|AF520275.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-14 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 326 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 379 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520274.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-13 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 326 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 379 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520273.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-12 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 326 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 379 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520272.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-11 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 326 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 379 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520271.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-10 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 326 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 379 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520270.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-9 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 326 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 379 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520269.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-8 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 326 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 379 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520268.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-7 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 326 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 379 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520267.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-6 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 326 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 379 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520266.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-5 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 326 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 379 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520265.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-4 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 326 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 379 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520264.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-3 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 326 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 379 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520263.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-2 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 326 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 379 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 576 aggaagctggcacggatgatgcacccgcccttccagat 613 |||||| |||| ||||||||||| |||||||||||||| Sbjct: 1195606 aggaagatggcccggatgatgcagccgcccttccagat 1195643 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 326 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttg 374 |||||||||||| || ||||||||||| | |||||||||| ||||||| Sbjct: 1195356 ctcgtaggtgtgggcgccgaagtagtcgcgctgggcctgggtgaggttg 1195404
>gb|AY891432.1| Synthetic construct Homo sapiens clone FLH014197.01L phosphogluconate dehydrogenase (PGD) mRNA, partial cds Length = 1452 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 383 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1364 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1311
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 326 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 379 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1892953 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1892900
>gb|AF394515.1| Porphyra yezoensis 6-phosphogluconate dehydrogenase (gnd) mRNA, partial cds Length = 1177 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 316 tgtcgaccctctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttgg 375 |||| |||| |||||| ||||| || || |||||||| | ||||||||||| |||||||| Sbjct: 1081 tgtccacccgctcgtacgtgtgggcgccaaagtagtcgcgctgggcctggaggaggttgg 1022 Query: 376 c 376 | Sbjct: 1021 c 1021
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 566 gatgcggtcgaggaagctggcacggatgatgcacccgcccttccagatc 614 ||||||||| |||||| ||| |||||||||||||||||| ||||||| Sbjct: 8642453 gatgcggtccaggaaggcggcgcggatgatgcacccgccccgccagatc 8642501 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 330 taggtgtgcgccccgaagtagtccc 354 |||||||||||||||||| |||||| Sbjct: 8642217 taggtgtgcgccccgaagaagtccc 8642241
>gb|AC137745.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0041J18, complete sequence Length = 129523 Score = 46.1 bits (23), Expect = 0.14 Identities = 77/95 (81%) Strand = Plus / Minus Query: 531 ttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgaggaagctggcacgg 590 ||||| |||||| ||||||||| || ||||||||||| | || || || | || ||| Sbjct: 3026 ttggccagctcagggttcctgtcatacgccttcttgatcctatcaagaaacttcgcccgg 2967 Query: 591 atgatgcacccgcccttccagatcctggccagctc 625 || ||||||||||||||||| ||||| || ||||| Sbjct: 2966 ataatgcacccgcccttccaaatccttgcaagctc 2932
>gb|DQ493912.1| Anguilla anguilla 6-phosphogluconate dehydrogenase mRNA, partial cds Length = 290 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggc 376 ||||||||||| || || || |||||||||||||||| |||||||| Sbjct: 260 taggtgtgcgcgccaaaataatccctctgggcctggagcaggttggc 214
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 46.1 bits (23), Expect = 0.14 Identities = 77/95 (81%) Strand = Plus / Minus Query: 531 ttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgaggaagctggcacgg 590 ||||| |||||| ||||||||| || ||||||||||| | || || || | || ||| Sbjct: 115856 ttggccagctcagggttcctgtcatacgccttcttgatcctatcaagaaacttcgcccgg 115797 Query: 591 atgatgcacccgcccttccagatcctggccagctc 625 || ||||||||||||||||| ||||| || ||||| Sbjct: 115796 ataatgcacccgcccttccaaatccttgcaagctc 115762
>gb|DQ415921.1| Cleome spinosa clone BAC Cs2, complete sequence Length = 132380 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 387 tccctccggtaggagtcgaagtaggccagactcgc 421 ||||||| ||| ||||||||||| ||||||||||| Sbjct: 84219 tccctcctgtacgagtcgaagtacgccagactcgc 84185
>gb|AY278362.2| Oryza sativa (japonica cultivar-group) cytosolic 6-phosphogluconate dehydrogenase (6PGDH2) mRNA, complete cds Length = 1480 Score = 46.1 bits (23), Expect = 0.14 Identities = 77/95 (81%) Strand = Plus / Minus Query: 531 ttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgaggaagctggcacgg 590 ||||| |||||| ||||||||| || ||||||||||| | || || || | || ||| Sbjct: 1162 ttggccagctcagggttcctgtcatacgccttcttgatcctatcaagaaacttcgcccgg 1103 Query: 591 atgatgcacccgcccttccagatcctggccagctc 625 || ||||||||||||||||| ||||| || ||||| Sbjct: 1102 ataatgcacccgcccttccaaatccttgcaagctc 1068
>emb|Z98269.1|DMC87B1 Drosophila melanogaster cosmid clone 87B1 Length = 40070 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctg 364 |||||||| || |||||||| |||||||||||||| Sbjct: 25460 taggtgtgggcgccgaagtaatccctctgggcctg 25426
>emb|X16638.1|SSPGDMR Pig pgd mRNA for 6-phosphogluconate dehydrogenase (EC. 1.1.1.44) Length = 1110 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggc 376 |||||||| ||||||||||| |||| ||| ||||||| |||||||| Sbjct: 665 taggtgtgagccccgaagtaatcccgctgcgcctggatcaggttggc 619
>emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segment 4/7 Length = 345997 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 584 ggcacggatgatgcacccgcccttccagatc 614 ||||||||||||||| ||||| ||||||||| Sbjct: 67699 ggcacggatgatgcagccgcctttccagatc 67669
>ref|NM_057512.3| Drosophila melanogaster Phosphogluconate dehydrogenase CG3724-RA (Pgd), mRNA Length = 1895 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctg 364 |||||||| || |||||||| |||||||||||||| Sbjct: 1629 taggtgtgggcgccgaagtaatccctctgggcctg 1595
>gb|AY089447.1| Drosophila melanogaster AT26455 full insert cDNA Length = 1915 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctg 364 |||||||| || |||||||| |||||||||||||| Sbjct: 1629 taggtgtgggcgccgaagtaatccctctgggcctg 1595
>gb|AC104146.4| Drosophila melanogaster X BAC RP98-32O19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177724 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctg 364 |||||||| || |||||||| |||||||||||||| Sbjct: 122259 taggtgtgggcgccgaagtaatccctctgggcctg 122225
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.14 Identities = 77/95 (81%) Strand = Plus / Minus Query: 531 ttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgaggaagctggcacgg 590 ||||| |||||| ||||||||| || ||||||||||| | || || || | || ||| Sbjct: 16475257 ttggccagctcagggttcctgtcatacgccttcttgatcctatcaagaaacttcgcccgg 16475198 Query: 591 atgatgcacccgcccttccagatcctggccagctc 625 || ||||||||||||||||| ||||| || ||||| Sbjct: 16475197 ataatgcacccgcccttccaaatccttgcaagctc 16475163
>dbj|AK071592.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104G24, full insert sequence Length = 1890 Score = 46.1 bits (23), Expect = 0.14 Identities = 77/95 (81%) Strand = Plus / Minus Query: 531 ttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgaggaagctggcacgg 590 ||||| |||||| ||||||||| || ||||||||||| | || || || | || ||| Sbjct: 1318 ttggccagctcagggttcctgtcatacgccttcttgatcctatcaagaaacttcgcccgg 1259 Query: 591 atgatgcacccgcccttccagatcctggccagctc 625 || ||||||||||||||||| ||||| || ||||| Sbjct: 1258 ataatgcacccgcccttccaaatccttgcaagctc 1224
>dbj|AK059546.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-F05, full insert sequence Length = 1057 Score = 46.1 bits (23), Expect = 0.14 Identities = 77/95 (81%) Strand = Plus / Minus Query: 531 ttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgaggaagctggcacgg 590 ||||| |||||| ||||||||| || ||||||||||| | || || || | || ||| Sbjct: 628 ttggccagctcagggttcctgtcatacgccttcttgatcctatcaagaaacttcgcccgg 569 Query: 591 atgatgcacccgcccttccagatcctggccagctc 625 || ||||||||||||||||| ||||| || ||||| Sbjct: 568 ataatgcacccgcccttccaaatccttgcaagctc 534
>gb|AY676468.1| Zalophus californianus microsatellite ZcCgDh46 sequence Length = 456 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 66 ggaagtagtggagggactggaga 88 ||||||||||||||||||||||| Sbjct: 412 ggaagtagtggagggactggaga 434
>gb|AE003423.2| Drosophila melanogaster chromosome X, section 7 of 74 of the complete sequence Length = 292830 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctg 364 |||||||| || |||||||| |||||||||||||| Sbjct: 81938 taggtgtgggcgccgaagtaatccctctgggcctg 81904
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.14 Identities = 77/95 (81%) Strand = Plus / Minus Query: 531 ttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgaggaagctggcacgg 590 ||||| |||||| ||||||||| || ||||||||||| | || || || | || ||| Sbjct: 16566261 ttggccagctcagggttcctgtcatacgccttcttgatcctatcaagaaacttcgcccgg 16566202 Query: 591 atgatgcacccgcccttccagatcctggccagctc 625 || ||||||||||||||||| ||||| || ||||| Sbjct: 16566201 ataatgcacccgcccttccaaatccttgcaagctc 16566167
>gb|M80598.1|DROPGD Drosophila melanogaster 6-phosphogluconate dehydrogenase (Pgd) gene, complete cds Length = 4767 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctg 364 |||||||| || |||||||| |||||||||||||| Sbjct: 4059 taggtgtgggcgccgaagtaatccctctgggcctg 4025
>gb|U02288.1|DSU02288 Drosophila simulans 6-phosphogluconate dehydrogenase (Pgd) gene, complete cds Length = 4290 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 330 taggtgtgcgccccgaagtagtccctctgggcctg 364 |||||||| || |||||||| |||||||||||||| Sbjct: 3585 taggtgtgggcgccgaagtaatccctctgggcctg 3551
>ref|XM_500938.1| Yarrowia lipolytica CLIB122, YALI0B15598g predicted mRNA Length = 1470 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 329 gtaggtgtgcgccccgaagtagtccctctgggcctgga 366 ||||||||| || ||||||||||| | ||||||||||| Sbjct: 1383 gtaggtgtgggcgccgaagtagtctcgctgggcctgga 1346
>emb|AJ130772.1|LDI130772 Laminaria digitata mRNA 6-phosphogluconate dehydrogenase Length = 3158 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 588 cggatgatgcacccgcccttccagat 613 ||||||||||| |||||||||||||| Sbjct: 1185 cggatgatgcagccgcccttccagat 1160 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 393 cggtaggagtcgaagtaggccaga 416 ||||||||||||||||||| |||| Sbjct: 1380 cggtaggagtcgaagtaggacaga 1357
>gb|AF394514.1| Porphyra yezoensis 6-phosphogluconate dehydrogenase (gnd) mRNA, partial cds Length = 1250 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 588 cggatgatgcacccgcccttccagat 613 ||||||||||| |||||||||||||| Sbjct: 710 cggatgatgcagccgcccttccagat 685
>gb|U14465.1|EVU14465 Escherichia vulneris ATCC 33821 6-phosphogluconate dehydrogenase (gnd) gene, partial cds Length = 1335 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 329 gtaggtgtgcgccccgaagtagtccctctgggcctgga 366 |||||| ||||| ||||||||||| | ||||||||||| Sbjct: 1326 gtaggtatgcgcaccgaagtagtcgcgctgggcctgga 1289
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 329 gtaggtgtgcgccccgaagtagtccctctgggcctgga 366 ||||||||| || ||||||||||| | ||||||||||| Sbjct: 2070833 gtaggtgtgggcgccgaagtagtctcgctgggcctgga 2070796
>gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full insert mRNA sequence Length = 890 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 tcgatgaggaggttggcgagc 539 ||||||||||||||||||||| Sbjct: 625 tcgatgaggaggttggcgagc 605
>ref|XM_776301.1| PREDICTED: Strongylocentrotus purpuratus similar to 6-phosphogluconate dehydrogenase, decarboxylating (LOC575941), mRNA Length = 1890 Score = 42.1 bits (21), Expect = 2.2 Identities = 48/57 (84%) Strand = Plus / Minus Query: 326 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaag 382 |||||||||||| || || |||||||| | ||| ||||||| ||| ||||| ||||| Sbjct: 1383 ctcgtaggtgtgtgcaccaaagtagtcacgctgagcctggatgagattggctggaag 1327
>emb|AJ843880.1| Platichthys flesus partial mRNA for 6-Phosphogluconate dehydrogenase (pgd gene) Length = 918 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 345 aagtagtccctctgggcctggacgaggtt 373 ||||| |||||||||||||||| |||||| Sbjct: 617 aagtaatccctctgggcctggaggaggtt 589
>gb|AC182751.1| Gasterosteus aculeatus clone VMRC26-154K14, complete sequence Length = 166500 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 ggagccgggcatgtcgaccct 325 ||||||||||||||||||||| Sbjct: 123114 ggagccgggcatgtcgaccct 123094
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 ctcggtagaccagcggcagc 256 |||||||||||||||||||| Sbjct: 971987 ctcggtagaccagcggcagc 971968
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 tgtcgtaggccttcttgatg 569 |||||||||||||||||||| Sbjct: 2870765 tgtcgtaggccttcttgatg 2870746
>gb|AC115723.13| Mus musculus chromosome 5, clone RP23-17D18, complete sequence Length = 206470 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ccactctgtgtggaaggagc 309 |||||||||||||||||||| Sbjct: 142537 ccactctgtgtggaaggagc 142518
>ref|XM_363384.1| Magnaporthe grisea 70-15 hypothetical protein (MG01310.4) partial mRNA Length = 837 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 ggtcgatgaggaggttggcg 536 |||||||||||||||||||| Sbjct: 744 ggtcgatgaggaggttggcg 763
>ref|XM_743291.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g00640) partial mRNA Length = 1167 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 cgccgttgttgatggcgagg 461 |||||||||||||||||||| Sbjct: 171 cgccgttgttgatggcgagg 190
>gb|AC113276.9| Mus musculus chromosome 5, clone RP23-383E21, complete sequence Length = 245002 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 gtagaaaataaatacaggac 125 |||||||||||||||||||| Sbjct: 40921 gtagaaaataaatacaggac 40940
>gb|AC103363.6| Mus musculus chromosome 17, clone RP24-247H9, complete sequence Length = 222909 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ttgtagaaaataaatacagg 123 |||||||||||||||||||| Sbjct: 161597 ttgtagaaaataaatacagg 161578
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 gatctcctgcgcgaactcgg 516 |||||||||||||||||||| Sbjct: 4960572 gatctcctgcgcgaactcgg 4960553
>emb|AL138685.21| Human DNA sequence from clone RP11-186J16 on chromosome 13 Contains the 3' end of the LHFP gene for lipoma HMGIC fusion partner, complete sequence Length = 84686 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ggagggactggagagaatat 94 |||||||||||||||||||| Sbjct: 48411 ggagggactggagagaatat 48430
>emb|AL049648.9|HSJ1178H5 Human DNA sequence from clone RP5-1178H5 on chromosome 20 Contains the RPL17P1 gene for ribosomal protein L17 pseudogene 1 a novel gene and part of the C20orf26 gene, complete sequence Length = 126130 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tagtaaaaattaaacggcag 159 |||||||||||||||||||| Sbjct: 107285 tagtaaaaattaaacggcag 107266
>emb|BX927152.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 5/10 Length = 349799 Score = 40.1 bits (20), Expect = 8.6 Identities = 53/64 (82%) Strand = Plus / Plus Query: 289 accactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgccccgaagt 348 ||||||| |||||||||||||| | |||||| | || |||||||||||| |||||| Sbjct: 136142 accactcggtgtggaaggagccatccttgtcgatgcgcttgtaggtgtgcgcaccgaaga 136201 Query: 349 agtc 352 |||| Sbjct: 136202 agtc 136205
>gb|AC112656.4| Homo sapiens X BAC RP11-555H23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142650 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gaatagtaaaaattaaacgg 156 |||||||||||||||||||| Sbjct: 38597 gaatagtaaaaattaaacgg 38616
>gb|AC022507.26| Homo sapiens 12 BAC RP11-25J3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154954 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 333 gtgtgcgccccgaagtagtccctctgggcctggacgaggttggc 376 ||||| ||||||||||| |||| ||| | ||||| ||||||||| Sbjct: 102703 gtgtgagccccgaagtaatcccgctgagtctggatgaggttggc 102660
>gb|AC090965.42| Papio anubis clone rp41-239m8, complete sequence Length = 172715 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tatgtgatctccttgtagaa 111 |||||||||||||||||||| Sbjct: 104843 tatgtgatctccttgtagaa 104862
>gb|AC090964.10| Papio anubis clone rp41-177g23, complete sequence Length = 182747 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tatgtgatctccttgtagaa 111 |||||||||||||||||||| Sbjct: 91765 tatgtgatctccttgtagaa 91746
>dbj|AK161172.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4831433I04 product:Castration induced prostatic apoptosis related protein-1, (CIPAR- 1) homolog [Rattus norvegicus], full insert sequence Length = 4942 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ccactctgtgtggaaggagc 309 |||||||||||||||||||| Sbjct: 1534 ccactctgtgtggaaggagc 1553
>dbj|AK167402.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530012D03 product:Castration induced prostatic apoptosis related protein-1, (CIPAR- 1) homolog [Rattus norvegicus], full insert sequence Length = 2072 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ccactctgtgtggaaggagc 309 |||||||||||||||||||| Sbjct: 1560 ccactctgtgtggaaggagc 1579
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 tcgcggacatgccgggggtg 437 |||||||||||||||||||| Sbjct: 415190 tcgcggacatgccgggggtg 415209
>gb|AC154004.7| Mus musculus 6 BAC RP24-169F24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 168376 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 gaagtagtggagggactggagaga 90 |||||| ||||||||||||||||| Sbjct: 48900 gaagtattggagggactggagaga 48877
>gb|AF287263.1|AF287263 Mus musculus ATP-binding cassette 1, sub-family A, member 1 (Abca1) gene, complete cds Length = 278572 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 tcttgtaccactctgtgtgg 302 |||||||||||||||||||| Sbjct: 4841 tcttgtaccactctgtgtgg 4860
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 8.6 Identities = 53/64 (82%) Strand = Plus / Plus Query: 289 accactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgccccgaagt 348 ||||||| |||||||||||||| | |||||| | || |||||||||||| |||||| Sbjct: 1530367 accactcggtgtggaaggagccatccttgtcgatgcgcttgtaggtgtgcgcaccgaaga 1530426 Query: 349 agtc 352 |||| Sbjct: 1530427 agtc 1530430
>ref|NM_145562.1| Mus musculus RIKEN cDNA 9130213B05 gene (9130213B05Rik), mRNA Length = 2101 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ccactctgtgtggaaggagc 309 |||||||||||||||||||| Sbjct: 1572 ccactctgtgtggaaggagc 1591
>gb|AF542178.1| Neisseria polysaccharea phenylalanyl-tRNA synthetase alpha chain (pheS) gene, partial cds; hypothetical protein, truncated very short patch repair endonuclease, methylase, hypothetical protein, and hypothetical protein genes, complete cds; and phenylalanyl-tRNA synthetase beta chain (pheT) gene, partial cds Length = 2455 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tcttccctccagggtttgat 56 |||||||||||||||||||| Sbjct: 1948 tcttccctccagggtttgat 1929
>gb|AC078820.28| Homo sapiens 12 BAC RP11-114H23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164812 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 333 gtgtgcgccccgaagtagtccctctgggcctggacgaggttggc 376 ||||| ||||||||||| |||| ||| | ||||| ||||||||| Sbjct: 95710 gtgtgagccccgaagtaatcccgctgagtctggatgaggttggc 95753
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 340 ccccgaagtagtccctctgggcctggac 367 ||||||||||| ||||||||| |||||| Sbjct: 1663461 ccccgaagtaggccctctggggctggac 1663488
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ctccttgtagaaaataaata 119 |||||||||||||||||||| Sbjct: 2606395 ctccttgtagaaaataaata 2606376
>gb|BC006604.1| Mus musculus RIKEN cDNA 9130213B05 gene, mRNA (cDNA clone MGC:11719 IMAGE:3966312), complete cds Length = 2101 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ccactctgtgtggaaggagc 309 |||||||||||||||||||| Sbjct: 1572 ccactctgtgtggaaggagc 1591
>gb|AC115062.13| Mus musculus chromosome 3, clone RP24-399B3, complete sequence Length = 198727 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 aaggactcatgactggcagc 196 |||||||||||||||||||| Sbjct: 144520 aaggactcatgactggcagc 144539
>gb|AC154001.5| Mus musculus 6 BAC RP24-419M4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 183830 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 gaagtagtggagggactggagaga 90 |||||| ||||||||||||||||| Sbjct: 89596 gaagtattggagggactggagaga 89619
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 340 ccccgaagtagtccctctgggcctggac 367 ||||||||||| ||||||||| |||||| Sbjct: 1342477 ccccgaagtaggccctctggggctggac 1342504
>gb|AC154286.1| Mus musculus BAC clone RP24-476G22 from 17, complete sequence Length = 181094 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ttgtagaaaataaatacagg 123 |||||||||||||||||||| Sbjct: 28645 ttgtagaaaataaatacagg 28626
>emb|AL833806.7| Mouse DNA sequence from clone RP23-425H11 on chromosome 4, complete sequence Length = 55805 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 tcttgtaccactctgtgtgg 302 |||||||||||||||||||| Sbjct: 50955 tcttgtaccactctgtgtgg 50936
>emb|AL133304.4|CNS01DUL Human chromosome 14 DNA sequence BAC R-116N8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 141905 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 tgtagaaaataaatacagga 124 |||||||||||||||||||| Sbjct: 83472 tgtagaaaataaatacagga 83453 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,324,450 Number of Sequences: 3902068 Number of extensions: 5324450 Number of successful extensions: 108126 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 107303 Number of HSP's gapped (non-prelim): 820 length of query: 628 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 605 effective length of database: 17,143,297,704 effective search space: 10371695110920 effective search space used: 10371695110920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
