Clone Name	rbags5b15
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK069970.1| Oryza sativa (japonica cultivar-group) cDNA clon...	291	1e-75
2	gb|AY109027.1| Zea mays PCO124171 mRNA sequence	254	3e-64
3	gb|BT017282.1| Zea mays clone EL01N0314E02.c mRNA sequence	236	7e-59
4	dbj|AK066244.1| Oryza sativa (japonica cultivar-group) cDNA clon...	170	4e-39
5	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	137	5e-29
6	gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome...	137	5e-29
7	gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare str...	137	5e-29
8	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	137	5e-29
9	gb|AY104612.1| Zea mays PCO113007 mRNA sequence	92	3e-15
10	gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome...	90	1e-14
11	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	90	1e-14
12	gb|AY020112.1| Oryza sativa microsatellite MRG2437 containing (C...	82	3e-12
13	gb|BT024064.1| Zea mays clone EL01N0446C11 mRNA sequence	66	2e-07
14	ref|XM_652596.1| Aspergillus nidulans FGSC A4 hypothetical prote...	48	0.036
15	ref|XM_384283.1| Gibberella zeae PH-1 chromosome 2 conserved hyp...	48	0.036
16	emb|AL390123.14| Human DNA sequence from clone RP11-566F5 on chr...	46	0.14
17	ref|XM_322528.1| Neurospora crassa OR74A hypothetical protein (N...	42	2.2
18	ref|XM_951614.1| Neurospora crassa OR74A hypothetical protein (N...	42	2.2
19	emb|AL445433.14| Human DNA sequence from clone RP11-234N17 on ch...	42	2.2
20	emb|AL391811.7| Human DNA sequence from clone RP11-449J1 on chro...	42	2.2
21	emb|BX908807.1| Neurospora crassa DNA linkage group III BAC cont...	42	2.2
22	gb|AC120194.6| Homo sapiens chromosome 8, clone RP11-110M13, com...	42	2.2
23	gb|AC022730.7| Homo sapiens chromosome 8, clone RP11-333A23, com...	42	2.2
24	gb|AC158403.4| Mus musculus chromosome 3, clone RP24-211L17, com...	42	2.2
25	gb|DQ001020.1| Podarcis muralis strain mur4 tRNA-Lys gene, compl...	42	2.2
26	emb|AM042542.1| Sordaria macrospora partial sbp gene for putativ...	42	2.2
27	gb|AC116727.9| Mus musculus chromosome 3, clone RP23-290J2, comp...	40	8.8
28	gb|AC163325.7| Mus musculus chromosome 1, clone RP23-76L21, comp...	40	8.8
29	gb|AE014831.1| Plasmodium falciparum 3D7 chromosome 10 section 3...	40	8.8
30	gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome...	40	8.8
31	gb|AC119856.13| Mus musculus chromosome 5, clone RP23-256B18, co...	40	8.8
32	gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence	40	8.8
33	gb|AC159443.1| Trypanosoma brucei chromosome 5 clone RPCI93-30H1...	40	8.8
34	gb|AC159432.1| Trypanosoma brucei chromosome 5 clone RPCI93-28F8...	40	8.8
35	gb|AC152451.5| Mus musculus BAC clone RP24-309M5 from chromosome...	40	8.8
36	ref|XM_364026.1| Magnaporthe grisea 70-15 hypothetical protein (...	40	8.8
37	gb|BC075660.1| Mus musculus paired-like homeodomain transcriptio...	40	8.8
38	ref|NM_011098.2| Mus musculus paired-like homeodomain transcript...	40	8.8
39	gb|AC121992.3| Mus musculus BAC clone RP24-300I17 from chromosom...	40	8.8
40	gb|AC004994.1| Homo sapiens PAC clone RP5-1194E15 from 7, comple...	40	8.8
41	emb|CT025576.8| Mouse DNA sequence from clone RP23-286F8 on chro...	40	8.8
42	gb|AC129305.4| Mus musculus BAC clone RP24-472F1 from chromosome...	40	8.8
43	gb|AC145783.1| Pan troglodytes BAC clone RP43-27O9 from 7, compl...	40	8.8
44	gb|AC142310.1| Pan troglodytes BAC clone RP43-45P13 from 7, comp...	40	8.8
45	emb|AL589702.8| Human DNA sequence from clone RP5-907A6 on chrom...	40	8.8
46	emb|AL442123.12| Human DNA sequence from clone RP11-175O19 on ch...	40	8.8
47	emb|AL138882.8| Human DNA sequence from clone RP1-195K21 on chro...	40	8.8
48	emb|AL049647.7|HSJ1027G4 Human DNA sequence from clone RP5-1027G...	40	8.8
49	emb|AL109630.2|DMBR7A4 Drosophila melanogaster BAC clone BACR7A4	40	8.8
50	gb|AC103548.8| Drosophila melanogaster X BAC RP98-19J1 (Roswell ...	40	8.8
51	gb|AC092530.35| Rattus norvegicus clone rp32-28p17, complete seq...	40	8.8
52	gb|AC097726.4| Drosophila melanogaster X BAC RP98-5N14 (Roswell ...	40	8.8
53	gb|AC098974.2| Homo sapiens chromosome 3 clone RP11-320M6, compl...	40	8.8
54	gb|AC015988.10| Homo sapiens, clone RP11-153F20, complete sequence	40	8.8
55	gb|AC068304.33| Homo sapiens 12 BAC RP11-515A6 (Roswell Park Can...	40	8.8
56	gb|BC102327.1| Bos taurus similar to Ran-specific GTPase-activat...	40	8.8
57	dbj|AK035083.1| Mus musculus 12 days embryo embryonic body betwe...	40	8.8
58	dbj|AK034846.1| Mus musculus 12 days embryo embryonic body betwe...	40	8.8
59	emb|AJ511259.1|TGO511259 Trypanosoma godfreyi partial GARP gene ...	40	8.8
60	gb|AC019058.4|AC019058 Homo sapiens BAC clone RP11-125B15 from Y...	40	8.8
61	dbj|BS000208.1| Pan troglodytes chromosome 22 clone:RP43-017N02,...	40	8.8
62	gb|AF201091.1|AF201091 Mus musculus paired-like homeodomain tran...	40	8.8
63	gb|AC116740.11| Mus musculus chromosome 3, clone RP23-446B17, co...	40	8.8
64	emb|AL672110.10| Mouse DNA sequence from clone RP23-338D24 on ch...	40	8.8
65	gb|AC007446.8|AC007446 Homo sapiens, clone hRPK.67_A_1, complete...	40	8.8
66	gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 o...	40	8.8
67	dbj|AP001696.1| Homo sapiens genomic DNA, chromosome 21q, sectio...	40	8.8
68	gb|U80011.1|MMU80011 Mus musculus pituitary homeobox 2 isoform a...	40	8.8
69	gb|U80010.1|MMU80010 Mus musculus pituitary homeobox 2 isoform b...	40	8.8
70	gb|AF048724.1|AF048724 Mus musculus ALL1 responsive protein ARP1...	40	8.8
71	gb|AF048723.1|AF048723 Mus musculus ALL1 responsive protein ARP1...	40	8.8
72	gb|AC140038.13| Mus musculus chromosome 1, clone RP24-290D14, co...	40	8.8
73	gb|U70132.1|MMU70132 Mus musculus bicoid-related homeodomain pro...	40	8.8
74	gb|U80036.1|MMU80036 Mus musculus orthodenticle-like homeobox 2 ...	40	8.8
75	ref|NM_001034586.1| Bos taurus similar to Ran-specific GTPase-ac...	40	8.8
76	dbj|AB006321.1| Mus musculus mRNA for Brx1b homeoprotein, comple...	40	8.8
77	dbj|AB006320.1| Mus musculus Brx1a mRNA for homeoprotein, comple...	40	8.8
78	dbj|AP001596.1| Homo sapiens genomic DNA, chromosome 21, clone:K...	40	8.8

---

>dbj|AK069970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039I06, full
           insert sequence
          Length = 1111

 Score =  291 bits (147), Expect = 1e-75
 Identities = 337/399 (84%), Gaps = 1/399 (0%)
 Strand = Plus / Minus

                                                                       
Query: 244 tttcagtcttcagcatccttcttatcatctactgcaggagtctccactttctccgtttgt 303
           ||||| |||| ||| ||||||||||| ||| |||||||||||||| ||||||| |  | |
Sbjct: 717 tttcactctttagcgtccttcttatcctcttctgcaggagtctcctctttctctgcattt 658

                                                                       
Query: 304 tcctcctttttgacctctgttacacttaacttctctaccagctcggcagcagacgaaacc 363
           |||||||||||   ||| || ||    | |||||| |||| | | |||| ||| || || 
Sbjct: 657 tcctccttttttgtctcggtcactgaaagcttctcaaccaaccctgcagtagaggagact 598

                                                                       
Query: 364 tcctcgctttctttctcctcattctttccttgctgctcagcaatctcgtctacaagatcc 423
           |||||  ||||||||||||| |||||||||||||||||||||||||| ||||| |  |||
Sbjct: 597 tcctcattttctttctcctcgttctttccttgctgctcagcaatctcttctaccatctcc 538

                                                                       
Query: 424 ttgaattttttgcaattctccaccgatccaaagcggatggcgaacatctcctccttgagc 483
            |||| || ||||| ||||| || ||||||||||| ||||||||||| ||||||||||||
Sbjct: 537 ctgaacttcttgcagttctcgacggatccaaagcgtatggcgaacatttcctccttgagc 478

                                                                       
Query: 484 tcacagtcggcaaaatccagcgcgtgccacacgcacgacttgtcgctccccggcgtgctc 543
           || | |||||| || ||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 477 tcgccgtcggcgaagtccagcgcgtgccacacgcacgacttgtcgct-gccggcgtgctc 419

                                                                       
Query: 544 ctgcatctttgtagtcgccacaacgaggtgattggcgcagatcttgagggtcttggcctg 603
           ||||||||| || |||| | | |||||||||||||||||||||||||| ||||| |||||
Sbjct: 418 ctgcatcttcgtggtcgtcgccacgaggtgattggcgcagatcttgagcgtcttagcctg 359

                                                  
Query: 604 tcgcatgacgaggcggaccttggaactctccttgtgctt 642
            ||||||||||| |||||||||    |||||||||||||
Sbjct: 358 gcgcatgacgagacggaccttgccggtctccttgtgctt 320



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 45/51 (88%), Gaps = 3/51 (5%)
 Strand = Plus / Minus

                                                              
Query: 113 aacacaacgaaaatttgtgaaaggaagatgaactctgaccataaaatgaat 163
           ||||||| ||||||||||||||||||   ||||| |||||| |||||||||
Sbjct: 832 aacacaatgaaaatttgtgaaaggaa---gaactttgaccacaaaatgaat 785



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   aaataattgtacaaacatgctg 22
           ||||||||||||||||||||||
Sbjct: 975 aaataattgtacaaacatgctg 954

---

>gb|AY109027.1| Zea mays PCO124171 mRNA sequence
          Length = 1125

 Score =  254 bits (128), Expect = 3e-64
 Identities = 225/256 (87%), Gaps = 1/256 (0%)
 Strand = Plus / Minus

                                                                       
Query: 371 tttctttctcctcattctttccttgctgctcagcaatctcgtctacaagatccttgaatt 430
           |||||||||||||  ||||||||||||| ||||| ||||| || |||   |||||||| |
Sbjct: 710 tttctttctcctcgctctttccttgctgttcagctatctcttcaacagtgtccttgaact 651

                                                                       
Query: 431 ttttgcaattctccaccgatccaaagcggatggcgaacatctcctccttgagctcacagt 490
           | ||||||||||| || |||||||| ||||| || ||||||||||| |||||||| | ||
Sbjct: 650 tcttgcaattctcgacagatccaaaacggatagcaaacatctcctctttgagctcgccgt 591

                                                                       
Query: 491 cggcaaaatccagcgcgtgccacacgcacgacttgtcgctccccggcgtgctcctgcatc 550
           |||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 590 cggcgaagtccagcgcgtgccacacgcacgacttgtcgctcccc-gcgtgctcctgcatc 532

                                                                       
Query: 551 tttgtagtcgccacaacgaggtgattggcgcagatcttgagggtcttggcctgtcgcatg 610
           || || |||||||| ||||| || |||||||||||||| || ||||| ||||| ||||||
Sbjct: 531 ttagtcgtcgccaccacgagatggttggcgcagatcttaagcgtcttcgcctgacgcatg 472

                           
Query: 611 acgaggcggaccttgg 626
           ||||||||||||||||
Sbjct: 471 acgaggcggaccttgg 456



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                            
Query: 1    aaataattgtacaaacatgctgaccccagcca 32
            ||||||||||||||||||||||||||||||||
Sbjct: 1063 aaataattgtacaaacatgctgaccccagcca 1032



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 257 catccttcttatcatctactgcaggagtctccactttctc 296
           ||||||||||||||||   |||||||| |||| |||||||
Sbjct: 827 catccttcttatcatcggatgcaggagcctcctctttctc 788

---

>gb|BT017282.1| Zea mays clone EL01N0314E02.c mRNA sequence
          Length = 1063

 Score =  236 bits (119), Expect = 7e-59
 Identities = 240/279 (86%), Gaps = 1/279 (0%)
 Strand = Plus / Minus

                                                                       
Query: 364 tcctcgctttctttctcctcattctttccttgctgctcagcaatctcgtctacaagatcc 423
           |||||| |||||||| ||||  ||||||||||||  ||||| ||||| || |||   |||
Sbjct: 655 tcctcgttttctttcacctcggtctttccttgctcttcagctatctcttcaacagtgtcc 596

                                                                       
Query: 424 ttgaattttttgcaattctccaccgatccaaagcggatggcgaacatctcctccttgagc 483
           ||||| || ||||||||||| || |||||||| ||||| || ||||||||||||||||||
Sbjct: 595 ttgaacttcttgcaattctcgacagatccaaaacggatagcaaacatctcctccttgagc 536

                                                                       
Query: 484 tcacagtcggcaaaatccagcgcgtgccacacgcacgacttgtcgctccccggcgtgctc 543
           |||| |||||| || |||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 535 tcaccgtcggcgaagtccagcgcgtgccacacgcacgacttgtcgct-ccctgcgtgctc 477

                                                                       
Query: 544 ctgcatctttgtagtcgccacaacgaggtgattggcgcagatcttgagggtcttggcctg 603
           ||||||||| || |||||||| || || || || || |||||||| || ||||| |||||
Sbjct: 476 ctgcatcttagtcgtcgccaccacaagatggttagcacagatcttaagcgtcttcgcctg 417

                                                  
Query: 604 tcgcatgacgaggcggaccttggaactctccttgtgctt 642
            ||||||||||||||||||||||   |||||||||||||
Sbjct: 416 acgcatgacgaggcggaccttggcggtctccttgtgctt 378

---

>dbj|AK066244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055L05, full
           insert sequence
          Length = 1138

 Score =  170 bits (86), Expect = 4e-39
 Identities = 192/226 (84%), Gaps = 1/226 (0%)
 Strand = Plus / Minus

                                                                       
Query: 420 atccttgaattttttgcaattctccaccgatccaaagcggatggcgaacatctcctcctt 479
           |||||| ||||| |||||||| || || || ||||| ||||| |||||||||||||||||
Sbjct: 524 atccttaaatttcttgcaattttcgacagagccaaaccggattgcgaacatctcctcctt 465

                                                                       
Query: 480 gagctcacagtcggcaaaatccagcgcgtgccacacgcacgacttgtcgctccccggcgt 539
            ||||| | |||||| || |||  ||||||||| |||||||||||||| || |||| | |
Sbjct: 464 aagctcgccgtcggcgaagtccgccgcgtgccagacgcacgacttgtcactgcccg-cat 406

                                                                       
Query: 540 gctcctgcatctttgtagtcgccacaacgaggtgattggcgcagatcttgagggtcttgg 599
           ||||||||||||| || ||||   |||| ||||| || |||||||||||||| |||||||
Sbjct: 405 gctcctgcatcttcgtggtcgaagcaactaggtggttcgcgcagatcttgagcgtcttgg 346

                                                         
Query: 600 cctgtcgcatgacgaggcggaccttggaactctccttgtgcttgag 645
           |||| |||||||||||||||||||||    ||||||||||||||||
Sbjct: 345 cctggcgcatgacgaggcggaccttgccgttctccttgtgcttgag 300

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  137 bits (69), Expect = 5e-29
 Identities = 97/105 (92%), Gaps = 1/105 (0%)
 Strand = Plus / Plus

                                                                            
Query: 448      gatccaaagcggatggcgaacatctcctccttgagctcacagtcggcaaaatccagcgcg 507
                ||||||||||| ||||||||||| |||||||||||||| | |||||| || |||||||||
Sbjct: 10161528 gatccaaagcgtatggcgaacatttcctccttgagctcgccgtcggcgaagtccagcgcg 10161587

                                                             
Query: 508      tgccacacgcacgacttgtcgctccccggcgtgctcctgcatctt 552
                |||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 10161588 tgccacacgcacgacttgtcgct-gccggcgtgctcctgcatctt 10161631



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 141/173 (81%)
 Strand = Plus / Plus

                                                                            
Query: 244      tttcagtcttcagcatccttcttatcatctactgcaggagtctccactttctccgtttgt 303
                ||||| |||| ||| ||||||||||| ||| |||||||||||||| ||||||| |  | |
Sbjct: 10159808 tttcactctttagcgtccttcttatcctcttctgcaggagtctcctctttctctgcattt 10159867

                                                                            
Query: 304      tcctcctttttgacctctgttacacttaacttctctaccagctcggcagcagacgaaacc 363
                |||||||||||   ||| || ||    | |||||| |||| | | |||| ||| || || 
Sbjct: 10159868 tcctccttttttgtctcggtcactgaaagcttctcaaccaaccctgcagtagaggagact 10159927

                                                                     
Query: 364      tcctcgctttctttctcctcattctttccttgctgctcagcaatctcgtctac 416
                |||||  ||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 10159928 tcctcattttctttctcctcgttctttccttgctgctcagcaatctcttctac 10159980



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 68/76 (89%)
 Strand = Plus / Plus

                                                                            
Query: 567      cgaggtgattggcgcagatcttgagggtcttggcctgtcgcatgacgaggcggaccttgg 626
                ||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||||||||| 
Sbjct: 10161741 cgaggtgattggcgcagatcttgagcgtcttagcctggcgcatgacgagacggaccttgc 10161800

                                
Query: 627      aactctccttgtgctt 642
                   |||||||||||||
Sbjct: 10161801 cggtctccttgtgctt 10161816



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 45/51 (88%), Gaps = 3/51 (5%)
 Strand = Plus / Plus

                                                                   
Query: 113      aacacaacgaaaatttgtgaaaggaagatgaactctgaccataaaatgaat 163
                ||||||| ||||||||||||||||||   ||||| |||||| |||||||||
Sbjct: 10159693 aacacaatgaaaatttgtgaaaggaa---gaactttgaccacaaaatgaat 10159740



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 1        aaataattgtacaaacatgctg 22
                ||||||||||||||||||||||
Sbjct: 10159550 aaataattgtacaaacatgctg 10159571

---

>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05,
              complete sequence
          Length = 122116

 Score =  137 bits (69), Expect = 5e-29
 Identities = 97/105 (92%), Gaps = 1/105 (0%)
 Strand = Plus / Plus

                                                                          
Query: 448    gatccaaagcggatggcgaacatctcctccttgagctcacagtcggcaaaatccagcgcg 507
              ||||||||||| ||||||||||| |||||||||||||| | |||||| || |||||||||
Sbjct: 107129 gatccaaagcgtatggcgaacatttcctccttgagctcgccgtcggcgaagtccagcgcg 107188

                                                           
Query: 508    tgccacacgcacgacttgtcgctccccggcgtgctcctgcatctt 552
              |||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 107189 tgccacacgcacgacttgtcgct-gccggcgtgctcctgcatctt 107232



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 141/173 (81%)
 Strand = Plus / Plus

                                                                          
Query: 244    tttcagtcttcagcatccttcttatcatctactgcaggagtctccactttctccgtttgt 303
              ||||| |||| ||| ||||||||||| ||| |||||||||||||| ||||||| |  | |
Sbjct: 105409 tttcactctttagcgtccttcttatcctcttctgcaggagtctcctctttctctgcattt 105468

                                                                          
Query: 304    tcctcctttttgacctctgttacacttaacttctctaccagctcggcagcagacgaaacc 363
              |||||||||||   ||| || ||    | |||||| |||| | | |||| ||| || || 
Sbjct: 105469 tcctccttttttgtctcggtcactgaaagcttctcaaccaaccctgcagtagaggagact 105528

                                                                   
Query: 364    tcctcgctttctttctcctcattctttccttgctgctcagcaatctcgtctac 416
              |||||  ||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 105529 tcctcattttctttctcctcgttctttccttgctgctcagcaatctcttctac 105581



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 68/76 (89%)
 Strand = Plus / Plus

                                                                          
Query: 567    cgaggtgattggcgcagatcttgagggtcttggcctgtcgcatgacgaggcggaccttgg 626
              ||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||||||||| 
Sbjct: 107342 cgaggtgattggcgcagatcttgagcgtcttagcctggcgcatgacgagacggaccttgc 107401

                              
Query: 627    aactctccttgtgctt 642
                 |||||||||||||
Sbjct: 107402 cggtctccttgtgctt 107417



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 45/51 (88%), Gaps = 3/51 (5%)
 Strand = Plus / Plus

                                                                 
Query: 113    aacacaacgaaaatttgtgaaaggaagatgaactctgaccataaaatgaat 163
              ||||||| ||||||||||||||||||   ||||| |||||| |||||||||
Sbjct: 105294 aacacaatgaaaatttgtgaaaggaa---gaactttgaccacaaaatgaat 105341



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1      aaataattgtacaaacatgctg 22
              ||||||||||||||||||||||
Sbjct: 105151 aaataattgtacaaacatgctg 105172

---

>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0045E22, from chromosome 3, complete sequence
          Length = 160920

 Score =  137 bits (69), Expect = 5e-29
 Identities = 97/105 (92%), Gaps = 1/105 (0%)
 Strand = Plus / Plus

                                                                         
Query: 448   gatccaaagcggatggcgaacatctcctccttgagctcacagtcggcaaaatccagcgcg 507
             ||||||||||| ||||||||||| |||||||||||||| | |||||| || |||||||||
Sbjct: 22941 gatccaaagcgtatggcgaacatttcctccttgagctcgccgtcggcgaagtccagcgcg 23000

                                                          
Query: 508   tgccacacgcacgacttgtcgctccccggcgtgctcctgcatctt 552
             |||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 23001 tgccacacgcacgacttgtcgct-gccggcgtgctcctgcatctt 23044



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 141/173 (81%)
 Strand = Plus / Plus

                                                                         
Query: 244   tttcagtcttcagcatccttcttatcatctactgcaggagtctccactttctccgtttgt 303
             ||||| |||| ||| ||||||||||| ||| |||||||||||||| ||||||| |  | |
Sbjct: 21221 tttcactctttagcgtccttcttatcctcttctgcaggagtctcctctttctctgcattt 21280

                                                                         
Query: 304   tcctcctttttgacctctgttacacttaacttctctaccagctcggcagcagacgaaacc 363
             |||||||||||   ||| || ||    | |||||| |||| | | |||| ||| || || 
Sbjct: 21281 tcctccttttttgtctcggtcactgaaagcttctcaaccaaccctgcagtagaggagact 21340

                                                                  
Query: 364   tcctcgctttctttctcctcattctttccttgctgctcagcaatctcgtctac 416
             |||||  ||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 21341 tcctcattttctttctcctcgttctttccttgctgctcagcaatctcttctac 21393



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 68/76 (89%)
 Strand = Plus / Plus

                                                                         
Query: 567   cgaggtgattggcgcagatcttgagggtcttggcctgtcgcatgacgaggcggaccttgg 626
             ||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||||||||| 
Sbjct: 23154 cgaggtgattggcgcagatcttgagcgtcttagcctggcgcatgacgagacggaccttgc 23213

                             
Query: 627   aactctccttgtgctt 642
                |||||||||||||
Sbjct: 23214 cggtctccttgtgctt 23229



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 45/51 (88%), Gaps = 3/51 (5%)
 Strand = Plus / Plus

                                                                
Query: 113   aacacaacgaaaatttgtgaaaggaagatgaactctgaccataaaatgaat 163
             ||||||| ||||||||||||||||||   ||||| |||||| |||||||||
Sbjct: 21106 aacacaatgaaaatttgtgaaaggaa---gaactttgaccacaaaatgaat 21153



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1     aaataattgtacaaacatgctg 22
             ||||||||||||||||||||||
Sbjct: 20963 aaataattgtacaaacatgctg 20984

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  137 bits (69), Expect = 5e-29
 Identities = 97/105 (92%), Gaps = 1/105 (0%)
 Strand = Plus / Plus

                                                                            
Query: 448      gatccaaagcggatggcgaacatctcctccttgagctcacagtcggcaaaatccagcgcg 507
                ||||||||||| ||||||||||| |||||||||||||| | |||||| || |||||||||
Sbjct: 10159629 gatccaaagcgtatggcgaacatttcctccttgagctcgccgtcggcgaagtccagcgcg 10159688

                                                             
Query: 508      tgccacacgcacgacttgtcgctccccggcgtgctcctgcatctt 552
                |||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 10159689 tgccacacgcacgacttgtcgct-gccggcgtgctcctgcatctt 10159732



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 141/173 (81%)
 Strand = Plus / Plus

                                                                            
Query: 244      tttcagtcttcagcatccttcttatcatctactgcaggagtctccactttctccgtttgt 303
                ||||| |||| ||| ||||||||||| ||| |||||||||||||| ||||||| |  | |
Sbjct: 10157909 tttcactctttagcgtccttcttatcctcttctgcaggagtctcctctttctctgcattt 10157968

                                                                            
Query: 304      tcctcctttttgacctctgttacacttaacttctctaccagctcggcagcagacgaaacc 363
                |||||||||||   ||| || ||    | |||||| |||| | | |||| ||| || || 
Sbjct: 10157969 tcctccttttttgtctcggtcactgaaagcttctcaaccaaccctgcagtagaggagact 10158028

                                                                     
Query: 364      tcctcgctttctttctcctcattctttccttgctgctcagcaatctcgtctac 416
                |||||  ||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 10158029 tcctcattttctttctcctcgttctttccttgctgctcagcaatctcttctac 10158081



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 68/76 (89%)
 Strand = Plus / Plus

                                                                            
Query: 567      cgaggtgattggcgcagatcttgagggtcttggcctgtcgcatgacgaggcggaccttgg 626
                ||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||||||||| 
Sbjct: 10159842 cgaggtgattggcgcagatcttgagcgtcttagcctggcgcatgacgagacggaccttgc 10159901

                                
Query: 627      aactctccttgtgctt 642
                   |||||||||||||
Sbjct: 10159902 cggtctccttgtgctt 10159917



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 45/51 (88%), Gaps = 3/51 (5%)
 Strand = Plus / Plus

                                                                   
Query: 113      aacacaacgaaaatttgtgaaaggaagatgaactctgaccataaaatgaat 163
                ||||||| ||||||||||||||||||   ||||| |||||| |||||||||
Sbjct: 10157794 aacacaatgaaaatttgtgaaaggaa---gaactttgaccacaaaatgaat 10157841



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 1        aaataattgtacaaacatgctg 22
                ||||||||||||||||||||||
Sbjct: 10157651 aaataattgtacaaacatgctg 10157672

---

>gb|AY104612.1| Zea mays PCO113007 mRNA sequence
          Length = 1164

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 169/206 (82%), Gaps = 3/206 (1%)
 Strand = Plus / Minus

                                                                       
Query: 421 tccttgaattttttgcaattctccaccgatccaaagcggatggcgaacatctcctccttg 480
           |||||||| || ||||| || || ||||| ||||| | |||||| |||||||||||||| 
Sbjct: 673 tccttgaacttcttgcagttttctaccgaaccaaacctgatggcaaacatctcctcctta 614

                                                                       
Query: 481 agctcacagtcggcaaaatccagc-gcgtgccacacgcacgacttgtcgctccccggcgt 539
           || || |  |||||||| || ||| |||||||| || |||||||||||||| |||| | |
Sbjct: 613 agttcgccatcggcaaagtc-agcagcgtgccaaacacacgacttgtcgctgcccg-cat 556

                                                                       
Query: 540 gctcctgcatctttgtagtcgccacaacgaggtgattggcgcagatcttgagggtcttgg 599
           ||||||||||||| || || |   | |||||||| || ||||||||||| || || || |
Sbjct: 555 gctcctgcatcttcgtggtggaggccacgaggtggttcgcgcagatcttaagcgttttag 496

                                     
Query: 600 cctgtcgcatgacgaggcggaccttg 625
           |||| |||||||| ||||||||||||
Sbjct: 495 cctggcgcatgactaggcggaccttg 470

---

>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0077J17, complete sequence
          Length = 141598

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                         
Query: 569   aggtgattggcgcagatcttgagggtcttggcctgtcgcatgacgaggcggaccttggaa 628
             ||||| || |||||||||||||| ||||||||||| |||||||||||||||||||||   
Sbjct: 65191 aggtggttcgcgcagatcttgagcgtcttggcctggcgcatgacgaggcggaccttgccg 65132

                              
Query: 629   ctctccttgtgcttgag 645
              ||||||||||||||||
Sbjct: 65131 ttctccttgtgcttgag 65115



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 88/102 (86%), Gaps = 1/102 (0%)
 Strand = Plus / Minus

                                                                         
Query: 451   ccaaagcggatggcgaacatctcctccttgagctcacagtcggcaaaatccagcgcgtgc 510
             ||||| ||||| ||||||||||||||||| ||||| | |||||| || |||  |||||||
Sbjct: 65495 ccaaaccggattgcgaacatctcctccttaagctcgccgtcggcgaagtccgccgcgtgc 65436

                                                       
Query: 511   cacacgcacgacttgtcgctccccggcgtgctcctgcatctt 552
             || |||||||||||||| || ||| || ||||||||||||||
Sbjct: 65435 cagacgcacgacttgtcactgccc-gcatgctcctgcatctt 65395

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                            
Query: 569      aggtgattggcgcagatcttgagggtcttggcctgtcgcatgacgaggcggaccttggaa 628
                ||||| || |||||||||||||| ||||||||||| |||||||||||||||||||||   
Sbjct: 16424754 aggtggttcgcgcagatcttgagcgtcttggcctggcgcatgacgaggcggaccttgccg 16424695

                                 
Query: 629      ctctccttgtgcttgag 645
                 ||||||||||||||||
Sbjct: 16424694 ttctccttgtgcttgag 16424678



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 88/102 (86%), Gaps = 1/102 (0%)
 Strand = Plus / Minus

                                                                            
Query: 451      ccaaagcggatggcgaacatctcctccttgagctcacagtcggcaaaatccagcgcgtgc 510
                ||||| ||||| ||||||||||||||||| ||||| | |||||| || |||  |||||||
Sbjct: 16425058 ccaaaccggattgcgaacatctcctccttaagctcgccgtcggcgaagtccgccgcgtgc 16424999

                                                          
Query: 511      cacacgcacgacttgtcgctccccggcgtgctcctgcatctt 552
                || |||||||||||||| || ||| || ||||||||||||||
Sbjct: 16424998 cagacgcacgacttgtcactgccc-gcatgctcctgcatctt 16424958



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 485      cacagtcggcaaaatccagc 504
                ||||||||||||||||||||
Sbjct: 17170425 cacagtcggcaaaatccagc 17170444

---

>gb|AY020112.1| Oryza sativa microsatellite MRG2437 containing (CT)X18, genomic
           sequence
          Length = 236

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                    
Query: 569 aggtgattggcgcagatcttgagggtcttggcctgtcgcatgacgaggcggaccttg 625
           ||||| || |||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 58  aggtggttcgcgcagatcttgagcgtcttggcctggcgcatgacgaggcggaccttg 2

---

>gb|BT024064.1| Zea mays clone EL01N0446C11 mRNA sequence
          Length = 1671

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 111/133 (83%), Gaps = 3/133 (2%)
 Strand = Plus / Minus

                                                                       
Query: 421 tccttgaattttttgcaattctccaccgatccaaagcggatggcgaacatctcctccttg 480
           |||||||| || ||||| || || ||||| ||||| | |||||| |||||||||||||| 
Sbjct: 154 tccttgaacttcttgcagttttctaccgaaccaaacctgatggcaaacatctcctcctta 95

                                                                       
Query: 481 agctcacagtcggcaaaatccagc-gcgtgccacacgcacgacttgtcgctccccggcgt 539
           || || |  |||||||| | |||| |||||||| || |||||||||||||| ||| || |
Sbjct: 94  agttcgccatcggcaaagt-cagcagcgtgccaaacacacgacttgtcgctgccc-gcat 37

                        
Query: 540 gctcctgcatctt 552
           |||||||||||||
Sbjct: 36  gctcctgcatctt 24

---

>ref|XM_652596.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0084.2), mRNA
          Length = 729

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                       
Query: 571 gtgattggcgcagatcttgagggtcttggcctgtcgcatgacgaggcggaccttggaact 630
           |||||||||||||| ||||||||| ||| |  | |||||||| |||||   ||||  | |
Sbjct: 528 gtgattggcgcagaccttgagggttttgtctcggcgcatgaccaggcgagtcttgccatt 469

                           
Query: 631 ctccttgtgcttgagc 646
           ||||||||||||||||
Sbjct: 468 ctccttgtgcttgagc 453

---

>ref|XM_384283.1| Gibberella zeae PH-1 chromosome 2 conserved hypothetical protein
           (FG04107.1) partial mRNA
          Length = 729

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                       
Query: 575 ttggcgcagatcttgagggtcttggcctgtcgcatgacgaggcggaccttggaactctcc 634
           |||||||||| ||||||||||||| |  |||||||||| || |||  ||||    |||||
Sbjct: 497 ttggcgcagaccttgagggtcttgtcgcgtcgcatgaccagtcgggtcttgccgttctcc 438

                       
Query: 635 ttgtgcttgagc 646
           ||||||||||||
Sbjct: 437 ttgtgcttgagc 426

---

>emb|AL390123.14| Human DNA sequence from clone RP11-566F5 on chromosome 10, complete
              sequence
          Length = 158093

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 62     tgactgacacaaaccaaactttg 84
              |||||||||||||||||||||||
Sbjct: 135708 tgactgacacaaaccaaactttg 135730

---

>ref|XM_322528.1| Neurospora crassa OR74A hypothetical protein (NCU00443.1) partial
           mRNA
          Length = 753

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 575 ttggcgcagatcttgagggtcttggcctgtcgcatgacgag 615
           |||||||||| ||||||||||||| |  | |||||||||||
Sbjct: 488 ttggcgcagaccttgagggtcttgtcgcggcgcatgacgag 448

---

>ref|XM_951614.1| Neurospora crassa OR74A hypothetical protein (NCU00443.1) partial
           mRNA
          Length = 753

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 575 ttggcgcagatcttgagggtcttggcctgtcgcatgacgag 615
           |||||||||| ||||||||||||| |  | |||||||||||
Sbjct: 488 ttggcgcagaccttgagggtcttgtcgcggcgcatgacgag 448

---

>emb|AL445433.14| Human DNA sequence from clone RP11-234N17 on chromosome 1 Contains the
             5' end of the gene for a novel protein, part of a novel
             gene (FLJ38225) and a ribosomal protein L5 (RPL5)
             pseudogene, complete sequence
          Length = 138918

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 370   ctttctttctcctcattcttt 390
             |||||||||||||||||||||
Sbjct: 44836 ctttctttctcctcattcttt 44856

---

>emb|AL391811.7| Human DNA sequence from clone RP11-449J1 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 150424

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 370   ctttctttctcctcattcttt 390
             |||||||||||||||||||||
Sbjct: 12722 ctttctttctcctcattcttt 12702

---

>emb|BX908807.1| Neurospora crassa DNA linkage group III BAC contig B13B7
          Length = 93134

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 575  ttggcgcagatcttgagggtcttggcctgtcgcatgacgag 615
            |||||||||| ||||||||||||| |  | |||||||||||
Sbjct: 4868 ttggcgcagaccttgagggtcttgtcgcggcgcatgacgag 4908

---

>gb|AC120194.6| Homo sapiens chromosome 8, clone RP11-110M13, complete sequence
          Length = 153726

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 374   ctttctcctcattctttcctt 394
             |||||||||||||||||||||
Sbjct: 90873 ctttctcctcattctttcctt 90893

---

>gb|AC022730.7| Homo sapiens chromosome 8, clone RP11-333A23, complete sequence
          Length = 155468

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 374    ctttctcctcattctttcctt 394
              |||||||||||||||||||||
Sbjct: 151407 ctttctcctcattctttcctt 151427

---

>gb|AC158403.4| Mus musculus chromosome 3, clone RP24-211L17, complete sequence
          Length = 156964

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 370   ctttctttctcctcattcttt 390
             |||||||||||||||||||||
Sbjct: 45698 ctttctttctcctcattcttt 45678

---

>gb|DQ001020.1| Podarcis muralis strain mur4 tRNA-Lys gene, complete sequence; ATP
            synthase subunit 8 (ATP8), ATP synthase subunit 6 (ATP6),
            and cytochrome c oxidase subunit III (cox3) genes,
            complete cds; tRNA-Gly gene, complete sequence; NADH
            dehydrogenase subunit 3 (ND3) gene, complete cds;
            tRNA-Arg gene, complete sequence; NADH dehydrogenase
            subunit 4L (ND4L) and NADH dehydrogenase subunit 4 (ND4)
            genes, complete cds; tRNA-His, tRNA-Ser, and tRNA-Leu
            genes, complete sequence; NADH dehydrogenase subunit 5
            (ND5) and NADH dehydrogenase subunit 6 (ND6) genes,
            complete cds; tRNA-Glu gene, complete sequence;
            cytochrome b (cytb) gene, complete cds; tRNA-Thr gene,
            complete sequence; and tRNA-Pro gene, partial sequence;
            mitochondrial
          Length = 7690

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 299  tttgttcctcctttttgacct 319
            |||||||||||||||||||||
Sbjct: 1930 tttgttcctcctttttgacct 1950

---

>emb|AM042542.1| Sordaria macrospora partial sbp gene for putative GTP binding
           protein, exons 1-2
          Length = 285

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 575 ttggcgcagatcttgagggtcttggcctgtcgcatgacgag 615
           |||||||||| ||||||||||||| |  | |||||||||||
Sbjct: 167 ttggcgcagaccttgagggtcttgtcgcggcgcatgacgag 127

---

>gb|AC116727.9| Mus musculus chromosome 3, clone RP23-290J2, complete sequence
          Length = 163945

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   gcccaagttttcagtcttca 255
             ||||||||||||||||||||
Sbjct: 59231 gcccaagttttcagtcttca 59250

---

>gb|AC163325.7| Mus musculus chromosome 1, clone RP23-76L21, complete sequence
          Length = 253153

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    aggaagatgaactctgacca 153
              ||||||||||||||||||||
Sbjct: 188192 aggaagatgaactctgacca 188211

---

>gb|AE014831.1| Plasmodium falciparum 3D7 chromosome 10 section 3 of 7 of the complete
              sequence
          Length = 250195

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    tttctcctcattctttcctt 394
              ||||||||||||||||||||
Sbjct: 100194 tttctcctcattctttcctt 100213

---

>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12,
              complete sequence
          Length = 164064

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 485    cacagtcggcaaaatccagc 504
              ||||||||||||||||||||
Sbjct: 114560 cacagtcggcaaaatccagc 114579

---

>gb|AC119856.13| Mus musculus chromosome 5, clone RP23-256B18, complete sequence
          Length = 218174

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 370   ctttctttctcctcattctttcct 393
             |||| |||||||||||||||||||
Sbjct: 91533 ctttatttctcctcattctttcct 91510

---

>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 371    tttctttctcctcattctttcctt 394
              ||||||||||||| ||||||||||
Sbjct: 391518 tttctttctcctccttctttcctt 391541

---

>gb|AC159443.1| Trypanosoma brucei chromosome 5 clone RPCI93-30H13, complete sequence
          Length = 152941

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 371  tttctttctcctcattctttcctt 394
            ||||||||||||| ||||||||||
Sbjct: 8068 tttctttctcctccttctttcctt 8091

---

>gb|AC159432.1| Trypanosoma brucei chromosome 5 clone RPCI93-28F8, complete sequence
          Length = 140539

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 371  tttctttctcctcattctttcctt 394
            ||||||||||||| ||||||||||
Sbjct: 2008 tttctttctcctccttctttcctt 1985

---

>gb|AC152451.5| Mus musculus BAC clone RP24-309M5 from chromosome 12, complete sequence
          Length = 145113

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 472    tcctccttgagctcacagtc 491
              ||||||||||||||||||||
Sbjct: 110698 tcctccttgagctcacagtc 110679

---

>ref|XM_364026.1| Magnaporthe grisea 70-15 hypothetical protein (MG08871.4) partial cds
          Length = 2277

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 483  ctcacagtcggcaaaatcca 502
            ||||||||||||||||||||
Sbjct: 1937 ctcacagtcggcaaaatcca 1956

---

>gb|BC075660.1| Mus musculus paired-like homeodomain transcription factor 2, mRNA
           (cDNA clone MGC:96389 IMAGE:30606653), complete cds
          Length = 1995

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 tcctcattctttccttgctg 398
           ||||||||||||||||||||
Sbjct: 549 tcctcattctttccttgctg 530

---

>ref|NM_011098.2| Mus musculus paired-like homeodomain transcription factor 2
           (Pitx2), mRNA
          Length = 1893

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 tcctcattctttccttgctg 398
           ||||||||||||||||||||
Sbjct: 448 tcctcattctttccttgctg 429

---

>gb|AC121992.3| Mus musculus BAC clone RP24-300I17 from chromosome 12, complete
             sequence
          Length = 139943

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 622   cttggaactctccttgtgct 641
             ||||||||||||||||||||
Sbjct: 24899 cttggaactctccttgtgct 24880

---

>gb|AC004994.1| Homo sapiens PAC clone RP5-1194E15 from 7, complete sequence
          Length = 80331

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 371   tttctttctcctcattctttcctt 394
             ||||||||||||| ||||||||||
Sbjct: 48312 tttctttctcctctttctttcctt 48289

---

>emb|CT025576.8| Mouse DNA sequence from clone RP23-286F8 on chromosome 16, complete
              sequence
          Length = 164971

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 370    ctttctttctcctcattctttcct 393
              |||||||||||||| |||||||||
Sbjct: 109959 ctttctttctcctccttctttcct 109936

---

>gb|AC129305.4| Mus musculus BAC clone RP24-472F1 from chromosome 12, complete sequence
          Length = 159429

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 622   cttggaactctccttgtgct 641
             ||||||||||||||||||||
Sbjct: 93265 cttggaactctccttgtgct 93284

---

>gb|AC145783.1| Pan troglodytes BAC clone RP43-27O9 from 7, complete sequence
          Length = 175651

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 371    tttctttctcctcattctttcctt 394
              ||||||||||||| ||||||||||
Sbjct: 174073 tttctttctcctctttctttcctt 174050

---

>gb|AC142310.1| Pan troglodytes BAC clone RP43-45P13 from 7, complete sequence
          Length = 197471

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 371   tttctttctcctcattctttcctt 394
             ||||||||||||| ||||||||||
Sbjct: 88161 tttctttctcctctttctttcctt 88138

---

>emb|AL589702.8| Human DNA sequence from clone RP5-907A6 on chromosome 1, complete
             sequence
          Length = 107103

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   catccttcttatcatctact 276
             ||||||||||||||||||||
Sbjct: 79739 catccttcttatcatctact 79758

---

>emb|AL442123.12| Human DNA sequence from clone RP11-175O19 on chromosome 10 Contains the
             3' end of the MLR2 gene for a novel protein (likely
             ortholog of mouse transcription factor MLR2), the gene for
             a novel protein novel protein (DKFZP564P1916)(FLJ13022),
             the 3' end of the SLIT1 gene for slit homolog 1
             (Drosophila) and a CpG island, complete sequence
          Length = 96660

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    cccaacccaagcatccatcc 104
             ||||||||||||||||||||
Sbjct: 68312 cccaacccaagcatccatcc 68331

---

>emb|AL138882.8| Human DNA sequence from clone RP1-195K21 on chromosome 6 Contains part
             of the KHDRBS2 gene for KH domain containing RNA binding
             signal transduction associated protein 2, complete
             sequence
          Length = 75512

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 121   gaaaatttgtgaaaggaagatgaa 144
             |||||||||| |||||||||||||
Sbjct: 33698 gaaaatttgtaaaaggaagatgaa 33675

---

>emb|AL049647.7|HSJ1027G4 Human DNA sequence from clone RP5-1027G4 on chromosome 20 Contains
            part of the SLC24A3 gene for solute carrier family 24
            (sodium/potassium/calcium exchanger) member 3 and a novel
            gene, complete sequence
          Length = 164845

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 539  tgctcctgcatctttgtagt 558
            ||||||||||||||||||||
Sbjct: 5019 tgctcctgcatctttgtagt 5038

---

>emb|AL109630.2|DMBR7A4 Drosophila melanogaster BAC clone BACR7A4
          Length = 212370

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 151 ccataaaatgaatcgaatga 170
           ||||||||||||||||||||
Sbjct: 869 ccataaaatgaatcgaatga 888

---

>gb|AC103548.8| Drosophila melanogaster X BAC RP98-19J1 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 182490

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    ccataaaatgaatcgaatga 170
              ||||||||||||||||||||
Sbjct: 154593 ccataaaatgaatcgaatga 154612

---

>gb|AC092530.35| Rattus norvegicus clone rp32-28p17, complete sequence
          Length = 221618

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   caagttttcagtcttcagca 258
             ||||||||||||||||||||
Sbjct: 98640 caagttttcagtcttcagca 98621

---

>gb|AC097726.4| Drosophila melanogaster X BAC RP98-5N14 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 146717

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 151  ccataaaatgaatcgaatga 170
            ||||||||||||||||||||
Sbjct: 1239 ccataaaatgaatcgaatga 1258

---

>gb|AC098974.2| Homo sapiens chromosome 3 clone RP11-320M6, complete sequence
          Length = 185761

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 372   ttctttctcctcattctttc 391
             ||||||||||||||||||||
Sbjct: 31346 ttctttctcctcattctttc 31327

---

>gb|AC015988.10| Homo sapiens, clone RP11-153F20, complete sequence
          Length = 150113

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   caagttttcagtcttcagca 258
             ||||||||||||||||||||
Sbjct: 27805 caagttttcagtcttcagca 27824

---

>gb|AC068304.33| Homo sapiens 12 BAC RP11-515A6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 155413

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 121   gaaaatttgtgaaaggaagatgaa 144
             |||||||||| |||||||||||||
Sbjct: 78979 gaaaatttgtaaaaggaagatgaa 78956

---

>gb|BC102327.1| Bos taurus similar to Ran-specific GTPase-activating protein (Ran
           binding protein 1) (RANBP1) (HpaII tiny fragments locus
           9a protein), mRNA (cDNA clone MGC:127635 IMAGE:7951108),
           complete cds
          Length = 882

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 575 ttggcgcagatcttgagggtcttg 598
           |||||||||||||| |||||||||
Sbjct: 406 ttggcgcagatcttaagggtcttg 383

---

>dbj|AK035083.1| Mus musculus 12 days embryo embryonic body between diaphragm region
           and neck cDNA, RIKEN full-length enriched library,
           clone:9430085M16 product:paired-like homeodomain
           transcription factor 2, full insert sequence
          Length = 1494

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 tcctcattctttccttgctg 398
           ||||||||||||||||||||
Sbjct: 542 tcctcattctttccttgctg 523

---

>dbj|AK034846.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430046L11 product:paired-like homeodomain
            transcription factor 2, full insert sequence
          Length = 2845

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 379  tcctcattctttccttgctg 398
            ||||||||||||||||||||
Sbjct: 1743 tcctcattctttccttgctg 1724

---

>emb|AJ511259.1|TGO511259 Trypanosoma godfreyi partial GARP gene for putative glutamic
           acid/alanine-rich protein
          Length = 415

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 361 acctcctcgctttctttctc 380
           ||||||||||||||||||||
Sbjct: 129 acctcctcgctttctttctc 110

---

>gb|AC019058.4|AC019058 Homo sapiens BAC clone RP11-125B15 from Y, complete sequence
          Length = 95691

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    aaaccaaactttgcccaacc 91
             ||||||||||||||||||||
Sbjct: 65756 aaaccaaactttgcccaacc 65775

---

>dbj|BS000208.1| Pan troglodytes chromosome 22 clone:RP43-017N02, map 22, complete
              sequences
          Length = 173249

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 417    aagatccttgaattttttgc 436
              ||||||||||||||||||||
Sbjct: 100783 aagatccttgaattttttgc 100764

---

>gb|AF201091.1|AF201091 Mus musculus paired-like homeodomain transcription factor Munc 30
           mRNA, partial cds
          Length = 1664

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 tcctcattctttccttgctg 398
           ||||||||||||||||||||
Sbjct: 211 tcctcattctttccttgctg 192

---

>gb|AC116740.11| Mus musculus chromosome 3, clone RP23-446B17, complete sequence
          Length = 173065

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 379    tcctcattctttccttgctg 398
              ||||||||||||||||||||
Sbjct: 138589 tcctcattctttccttgctg 138570

---

>emb|AL672110.10| Mouse DNA sequence from clone RP23-338D24 on chromosome X, complete
              sequence
          Length = 167407

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 83     tgcccaacccaagcatccatccca 106
              ||||||||||||| ||||||||||
Sbjct: 149404 tgcccaacccaaggatccatccca 149381

---

>gb|AC007446.8|AC007446 Homo sapiens, clone hRPK.67_A_1, complete sequence
          Length = 177471

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 121   gaaaatttgtgaaaggaagatgaa 144
             |||||||||| |||||||||||||
Sbjct: 66254 gaaaatttgtaaaaggaagatgaa 66277

---

>gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 of 74 of the complete
              sequence
          Length = 315092

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    ccataaaatgaatcgaatga 170
              ||||||||||||||||||||
Sbjct: 292598 ccataaaatgaatcgaatga 292617

---

>dbj|AP001696.1| Homo sapiens genomic DNA, chromosome 21q, section 40/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 417    aagatccttgaattttttgc 436
              ||||||||||||||||||||
Sbjct: 123597 aagatccttgaattttttgc 123578

---

>gb|U80011.1|MMU80011 Mus musculus pituitary homeobox 2 isoform a (Pitx2) mRNA, complete
           cds
          Length = 1796

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 tcctcattctttccttgctg 398
           ||||||||||||||||||||
Sbjct: 328 tcctcattctttccttgctg 309

---

>gb|U80010.1|MMU80010 Mus musculus pituitary homeobox 2 isoform b (Pitx2) mRNA, complete
           cds
          Length = 1893

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 tcctcattctttccttgctg 398
           ||||||||||||||||||||
Sbjct: 448 tcctcattctttccttgctg 429

---

>gb|AF048724.1|AF048724 Mus musculus ALL1 responsive protein ARP1c (Arp1) mRNA, complete
           cds
          Length = 2273

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 tcctcattctttccttgctg 398
           ||||||||||||||||||||
Sbjct: 845 tcctcattctttccttgctg 826

---

>gb|AF048723.1|AF048723 Mus musculus ALL1 responsive protein ARP1a (Arp1) mRNA, complete
           cds
          Length = 1740

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 tcctcattctttccttgctg 398
           ||||||||||||||||||||
Sbjct: 312 tcctcattctttccttgctg 293

---

>gb|AC140038.13| Mus musculus chromosome 1, clone RP24-290D14, complete sequence
          Length = 171967

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   aggaagatgaactctgacca 153
             ||||||||||||||||||||
Sbjct: 15424 aggaagatgaactctgacca 15443

---

>gb|U70132.1|MMU70132 Mus musculus bicoid-related homeodomain protein solurshin (Rgs)
           mRNA, partial cds
          Length = 1285

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 tcctcattctttccttgctg 398
           ||||||||||||||||||||
Sbjct: 34  tcctcattctttccttgctg 15

---

>gb|U80036.1|MMU80036 Mus musculus orthodenticle-like homeobox 2 (Otlx2) mRNA, complete
           cds
          Length = 1788

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 tcctcattctttccttgctg 398
           ||||||||||||||||||||
Sbjct: 346 tcctcattctttccttgctg 327

---

>ref|NM_001034586.1| Bos taurus similar to Ran-specific GTPase-activating protein (Ran
           binding protein 1) (RANBP1) (HpaII tiny fragments locus
           9a protein) (MGC127635), mRNA
          Length = 882

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 575 ttggcgcagatcttgagggtcttg 598
           |||||||||||||| |||||||||
Sbjct: 406 ttggcgcagatcttaagggtcttg 383

---

>dbj|AB006321.1| Mus musculus mRNA for Brx1b homeoprotein, complete cds
          Length = 1376

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 tcctcattctttccttgctg 398
           ||||||||||||||||||||
Sbjct: 473 tcctcattctttccttgctg 454

---

>dbj|AB006320.1| Mus musculus Brx1a mRNA for homeoprotein, complete cds
          Length = 1340

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 tcctcattctttccttgctg 398
           ||||||||||||||||||||
Sbjct: 437 tcctcattctttccttgctg 418

---

>dbj|AP001596.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1466C5, APP-D21S292
             region, complete sequence
          Length = 151079

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 417   aagatccttgaattttttgc 436
             ||||||||||||||||||||
Sbjct: 24782 aagatccttgaattttttgc 24763


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,776,163
Number of Sequences: 3902068
Number of extensions: 5776163
Number of successful extensions: 116318
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116039
Number of HSP's gapped (non-prelim): 259
length of query: 646
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 623
effective length of database: 17,143,297,704
effective search space: 10680274469592
effective search space used: 10680274469592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---