ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4m15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HAT1_ORYSA (Q6ES10) Probable acetyltransferase type B catalytic ... 239 6e-63
2HAT1_MAIZE (Q8LPU4) Histone acetyltransferase type B catalytic s... 220 2e-57
3HATB_ARATH (Q9FJT8) Histone acetyltransferase type B catalytic s... 99 8e-21
4KPYK_CLOAB (O08309) Pyruvate kinase (EC 2.7.1.40) (PK) 33 0.91
5RL3R1_HUMAN (Q9NSD7) Relaxin-3 receptor 1 (RLN3 receptor 1) (Rel... 32 1.2
6FOXN1_MOUSE (Q61575) Forkhead box protein N1 (Transcription fact... 31 2.6
7IL1A_FELCA (O46613) Interleukin-1 alpha precursor (IL-1 alpha) 31 2.6
8Y1732_AQUAE (O67622) UPF0144 protein aq_1732 31 2.6
9BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTP... 31 3.5
10EVG1_DROME (Q9VSS7) UPF0193 protein EVG1 homolog 31 3.5
11ANFC3_FUGRU (Q805D4) C-type natriuretic peptide 3 precursor 31 3.5
12IL1A_CANFA (O46612) Interleukin-1 alpha precursor (IL-1 alpha) 30 4.5
13Y130_MYCGE (P47376) UPF0144 protein MG130 30 4.5
14TBCD1_HUMAN (Q86TI0) TBC1 domain family member 1 30 5.9
15GCN5_CANGA (Q6FTW5) Histone acetyltransferase GCN5 (EC 2.3.1.48) 30 5.9
16TS101_RAT (Q6IRE4) Tumor susceptibility gene 101 protein 30 7.7
17TS101_MOUSE (Q61187) Tumor susceptibility gene 101 protein 30 7.7
18HAT1_CRYNE (Q5KNS9) Histone acetyltransferase type B catalytic s... 30 7.7
19TBCD1_MOUSE (Q60949) TBC1 domain family member 1 30 7.7
20Y1457_METJA (Q58852) Hypothetical protein MJ1457 30 7.7

>HAT1_ORYSA (Q6ES10) Probable acetyltransferase type B catalytic subunit (EC|
           2.3.1.48) (HAT B)
          Length = 466

 Score =  239 bits (609), Expect = 6e-63
 Identities = 114/148 (77%), Positives = 135/148 (91%)
 Frame = -1

Query: 612 LSKRTHSLIMVPPADLAETVRLKLKINKKQFLRCWEILIYLHLDAENPKCIGNFRACIYD 433
           LSKRT SL MVPP+DLAETVR KLKINKKQFLRCWEILIYL+LDAE+ K + NFRACIYD
Sbjct: 314 LSKRTSSLKMVPPSDLAETVRQKLKINKKQFLRCWEILIYLNLDAEDRKSMDNFRACIYD 373

Query: 432 RTKGELLGAASGTNGKRLVQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQPEDLATQEEQ 253
           R KGE+LG ++G NGKRLVQ+P++FDE+T FAV+WT++GGD D+QTV+QQPEDL TQE+Q
Sbjct: 374 RIKGEILGTSTGPNGKRLVQMPSNFDEETCFAVYWTQDGGDADDQTVEQQPEDLKTQEQQ 433

Query: 252 LNELVDNQMEEIAEVAKNVTSRGKDKLA 169
           LNE+VD+QMEEI E+AKNVTSRGKDKL+
Sbjct: 434 LNEVVDSQMEEIVEIAKNVTSRGKDKLS 461



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>HAT1_MAIZE (Q8LPU4) Histone acetyltransferase type B catalytic subunit (EC|
           2.3.1.48) (Histone acetyltransferase HAT B) (Histone
           acetyltransferase HAT-B-p50)
          Length = 468

 Score =  220 bits (561), Expect = 2e-57
 Identities = 109/147 (74%), Positives = 128/147 (87%)
 Frame = -1

Query: 612 LSKRTHSLIMVPPADLAETVRLKLKINKKQFLRCWEILIYLHLDAENPKCIGNFRACIYD 433
           LSKR  SL MVPPADL ETVR KLKINKKQFLRCWEIL++L LD+++ K + NFRACIYD
Sbjct: 316 LSKRAQSLRMVPPADLMETVRQKLKINKKQFLRCWEILVFLSLDSQDHKSMDNFRACIYD 375

Query: 432 RTKGELLGAASGTNGKRLVQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQPEDLATQEEQ 253
           R KGE+LG+ASGTN KRL+Q+PTSF+++ SFAV+WT+E  DED QTV+QQPEDL TQE+Q
Sbjct: 376 RMKGEILGSASGTNRKRLLQMPTSFNKEASFAVYWTQEIEDEDEQTVEQQPEDLKTQEQQ 435

Query: 252 LNELVDNQMEEIAEVAKNVTSRGKDKL 172
           LNELVD Q+EEIA VAKNVTSR KDK+
Sbjct: 436 LNELVDIQIEEIAGVAKNVTSRCKDKM 462



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>HATB_ARATH (Q9FJT8) Histone acetyltransferase type B catalytic subunit (EC|
           2.3.1.48) (HAT B)
          Length = 467

 Score = 99.4 bits (246), Expect = 8e-21
 Identities = 59/144 (40%), Positives = 87/144 (60%)
 Frame = -1

Query: 612 LSKRTHSLIMVPPADLAETVRLKLKINKKQFLRCWEILIYLHLDAENPKCIGNFRACIYD 433
           LSK+       PP +  E VR  LKINKKQFL+CWEILIYL LD  + K + ++ + I +
Sbjct: 323 LSKKAQIPRFTPPLNAIEKVRESLKINKKQFLKCWEILIYLALDPID-KYMEDYTSVITN 381

Query: 432 RTKGELLGAASGTNGKRLVQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQPEDLATQEEQ 253
             + ++LG    T  K++V VP+SF+ + SF VF +  G  E+  T  Q  E+   QE+Q
Sbjct: 382 HVRTDILGKDIETPKKQVVDVPSSFEPEASFVVFKSVNG--EEANTNVQVDENKPDQEQQ 439

Query: 252 LNELVDNQMEEIAEVAKNVTSRGK 181
           L +LV+ ++ EI  VA+ V+  G+
Sbjct: 440 LKQLVEERIREIKLVAEKVSKSGQ 463



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>KPYK_CLOAB (O08309) Pyruvate kinase (EC 2.7.1.40) (PK)|
          Length = 473

 Score = 32.7 bits (73), Expect = 0.91
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
 Frame = -1

Query: 417 LLGAASGTNGKRL-VQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQPEDLATQEEQLNEL 241
           L+G+  G N   + +Q+P   ++D S  +F  KE  D  + +  ++PED+    + LNE 
Sbjct: 150 LVGSHKGVNVPNVSIQLPAMTEKDKSDLIFGCKEEIDMVSASFIRKPEDVLAIRKVLNE- 208

Query: 240 VDNQMEEIAEVAKNVTSRGKDKLAA 166
             N  E I   +K     G D + A
Sbjct: 209 --NGGENIQIFSKIENQEGVDNIDA 231



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>RL3R1_HUMAN (Q9NSD7) Relaxin-3 receptor 1 (RLN3 receptor 1) (Relaxin family|
           peptide receptor 3) (Somatostatin- and angiotensin-like
           peptide receptor) (G protein-coupled receptor SALPR)
           (GPCR135)
          Length = 469

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
 Frame = -2

Query: 536 STRNSSCGAGKF*SIYTLMPKIPSASVTSGPASTTAPKVNY--------SAPPLEPTGSA 381
           +T N + G  K   +++L+P +  A+ TSG AS   P + +         APP  P GS 
Sbjct: 10  ATMNKAAGGDKLAELFSLVPDLLEAANTSGNASLQLPDLWWELGLELPDGAPPGHPPGSG 69

Query: 380 LSKCPLVLTRTRHLL 336
            ++      R R L+
Sbjct: 70  GAESADTEARVRILI 84



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>FOXN1_MOUSE (Q61575) Forkhead box protein N1 (Transcription factor winged-helix|
           nude) (Hepatocyte nuclear factor 3 forkhead homolog 11)
           (HNF-3/forkhead homolog 11) (HFH-11)
          Length = 648

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +3

Query: 231 GCPPTHLAAPPE*RDLPAAAGLSDYLRPRPP 323
           GCPP  LA P   R +  +AGLS  L P  P
Sbjct: 398 GCPPPGLAGPGPIRPMAPSAGLSQPLHPMHP 428



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>IL1A_FELCA (O46613) Interleukin-1 alpha precursor (IL-1 alpha)|
          Length = 270

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -1

Query: 387 KRLVQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQPEDLATQEEQL 250
           K + + P +  ++T+   FW + G     ++V      +ATQEEQL
Sbjct: 205 KEMPETPKTIRDETNLLFFWERHGSKNYFKSVAHPKLFIATQEEQL 250



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>Y1732_AQUAE (O67622) UPF0144 protein aq_1732|
          Length = 558

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 16/69 (23%), Positives = 33/69 (47%)
 Frame = -1

Query: 294 VQQQPEDLATQEEQLNELVDNQMEEIAEVAKNVTSRGKDKLAA*WREILQLEGRKLQKFL 115
           ++ + E+L   +E++ EL   ++EE+  +AK      + ++     E  + +  KL K +
Sbjct: 157 IRHKEEELKHMKEEVEELKKKELEELQRIAKLTLEEARQEIIKKVEEEAKKDAVKLMKVI 216

Query: 114 NGGYPRRGE 88
                RR E
Sbjct: 217 EEDAKRRAE 225



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>BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTPases 5) (Serum|
           protein MSE55)
          Length = 391

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 20/59 (33%), Positives = 26/59 (44%)
 Frame = -2

Query: 488 TLMPKIPSASVTSGPASTTAPKVNYSAPPLEPTGSALSKCPLVLTRTRHLLCSGQRRAG 312
           T  P  P+A+  +  A+  AP  N SAP   PTG A +      + T H  C     AG
Sbjct: 235 TANPTGPAANPPATTANPPAPAANPSAPAATPTGPAANPPAPAASSTPHGHCPNGVTAG 293



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>EVG1_DROME (Q9VSS7) UPF0193 protein EVG1 homolog|
          Length = 250

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
 Frame = -1

Query: 279 EDLATQEEQLNELVDNQMEEIAEVAKNVTSRG---------KDKLAA*WREILQLEGRKL 127
           E L T+E+ +NEL+D Q+ E AE    + S G         +D++A   R I  LE  K+
Sbjct: 181 EQLVTEEDLINELLD-QINERAEWLTEMESMGQGKKYRPEIRDQIAERLRRIQALES-KM 238

Query: 126 QKFLNGGY 103
           +   NGG+
Sbjct: 239 KMKSNGGF 246



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>ANFC3_FUGRU (Q805D4) C-type natriuretic peptide 3 precursor|
          Length = 158

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -1

Query: 324 KEGGDEDNQTVQQQPEDLATQEEQLNELVDNQMEEIAE 211
           +E  +E  + VQ+Q E++  Q+E++ E  + Q EE+ E
Sbjct: 52  QEQQEEVQEKVQEQQEEVQEQQEEVQEQQEEQQEEVQE 89



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>IL1A_CANFA (O46612) Interleukin-1 alpha precursor (IL-1 alpha)|
          Length = 265

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 14/53 (26%), Positives = 26/53 (49%)
 Frame = -1

Query: 387 KRLVQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQPEDLATQEEQLNELVDNQ 229
           K + + P +  ++T+   FW + G     ++V Q    +ATQE +L  +   Q
Sbjct: 200 KEMPETPKTIRDETNLLFFWERHGSKHYFKSVAQPKLFIATQERKLVHMARGQ 252



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>Y130_MYCGE (P47376) UPF0144 protein MG130|
          Length = 484

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 26/93 (27%), Positives = 45/93 (48%)
 Frame = -1

Query: 477 ENPKCIGNFRACIYDRTKGELLGAASGTNGKRLVQVPTSFDEDTSFAVFWTKEGGDEDNQ 298
           +NPK   NF+A  Y++ K  LL   + T   +L+      +E TS            DN 
Sbjct: 46  KNPKKANNFKANEYEKIK--LLKNQNFTESNKLIATTNELNELTS----------QLDNI 93

Query: 297 TVQQQPEDLATQEEQLNELVDNQMEEIAEVAKN 199
            V+   + LA   + +N+ +D Q+++I ++ KN
Sbjct: 94  LVRIINKPLA---KLVNDFLDEQIKQIVKLDKN 123



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>TBCD1_HUMAN (Q86TI0) TBC1 domain family member 1|
          Length = 1168

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = -1

Query: 312 DEDNQTVQQQPEDLATQEEQLNELVDNQMEEIAEVAKNVTSRGKDKLAA*WREILQLEGR 133
           +++NQ +Q    DL      LN+ +    EEI    K VT+  +  L+   R  ++ +  
Sbjct: 738 EKENQKLQASENDL------LNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDME 791

Query: 132 KLQKFLNGGYPR--RGEL 85
           K+   +  G PR  RGE+
Sbjct: 792 KMHSAVGQGVPRHHRGEI 809



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>GCN5_CANGA (Q6FTW5) Histone acetyltransferase GCN5 (EC 2.3.1.48)|
          Length = 546

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
 Frame = -1

Query: 372 VPTSFDEDTSFAVFWTKEGGDE---DNQTVQQQPEDLATQEEQLNELVDNQMEEI 217
           V  S +ED + AV  TKE  DE   DN+T +++ ++   +EE+     D  +EE+
Sbjct: 114 VDESKEEDAAAAVDITKEKKDEQESDNKTEEKKVQENEEEEEEDENKNDEDVEEL 168



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>TS101_RAT (Q6IRE4) Tumor susceptibility gene 101 protein|
          Length = 391

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -1

Query: 321 EGGDEDNQTVQQQPEDLATQEEQLNELVDNQMEEIAEVAKNV 196
           +G   +   +++  EDL    ++L E+V    +E+AEV KN+
Sbjct: 248 DGAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNI 289



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>TS101_MOUSE (Q61187) Tumor susceptibility gene 101 protein|
          Length = 391

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -1

Query: 321 EGGDEDNQTVQQQPEDLATQEEQLNELVDNQMEEIAEVAKNV 196
           +G   +   +++  EDL    ++L E+V    +E+AEV KN+
Sbjct: 248 DGAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNI 289



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>HAT1_CRYNE (Q5KNS9) Histone acetyltransferase type B catalytic subunit (EC|
           2.3.1.48)
          Length = 416

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -1

Query: 555 VRLKLKINKKQFLRCWEILIYLHLDAENPKCIGNFR 448
           +R K KI ++QF R  E+L++  LD  NP  +  +R
Sbjct: 334 IRRKYKIAQRQFDRLLEMLLFRQLDKGNPDKVKAYR 369



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>TBCD1_MOUSE (Q60949) TBC1 domain family member 1|
          Length = 1255

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = -1

Query: 312  DEDNQTVQQQPEDLATQEEQLNELVDNQMEEIAEVAKNVTSRGKDKLAA*WREILQLEGR 133
            +++NQ +Q    DL      LN+ +    EEI    K VT+  +  L+   R  ++ +  
Sbjct: 825  EKENQKLQASENDL------LNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDME 878

Query: 132  KLQKFLNGGYPR--RGEL 85
            K+   +  G PR  RGE+
Sbjct: 879  KVHSAVGQGVPRHHRGEI 896



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>Y1457_METJA (Q58852) Hypothetical protein MJ1457|
          Length = 135

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
 Frame = -1

Query: 504 ILIYLHLDAENPKCIGNF-RACIYDRTKGELLGAASGTNGKRLV-QVPTSFDEDTSFAVF 331
           IL YL    +N    G   R  + +R    LLG A+   G  +  ++ T   ED    V 
Sbjct: 26  ILGYLIFSRKNKTVNGTANRTVVVERDSSNLLGTAAAVAGGVIAGELITDAIED----VI 81

Query: 330 WTKEGGDEDNQTVQQQPEDLATQEEQLNELVDNQMEEIAEVAKNVTS 190
              E  + D    +     +    E++++ VDN +E+I +   N+T+
Sbjct: 82  NNNENNEADGYNSEGIETTIEDTIEEIDKGVDNVIEDITDEIDNITN 128


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,004,937
Number of Sequences: 219361
Number of extensions: 1846598
Number of successful extensions: 6780
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6744
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5824436538
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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