>COLL6_MIMIV (Q5UQ50) Collagen-like protein 6|
          Length = 1387

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = -1

Query: 103 WLDKTSSYYYSLSDCIPVYHDISSPLC---CENGLVC 2
           +LD+T+ YYY  ++CI + +  +   C   C+ G  C
Sbjct: 53  YLDRTTQYYYKKNNCIWIKYFCNGYCCFKGCKGGFFC 89

>SYS_HUMAN (P49591) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 513

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
 Frame = +1

Query: 10  NHFRSTKGM-KCHDIQ-----VYSLTGYNNSWKFYQAMDTSREDF 126
           +H R T+G+ + H  +     VYS    N SW+ ++ M T+ E+F
Sbjct: 306 SHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEF 350

>CLPX_MYXXA (Q9X5N1) ATP-dependent Clp protease ATP-binding subunit clpX|
          Length = 427

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 227 ELIGFCEDVVSDEIGRAET 171
           E IG C D++++EI R ET
Sbjct: 40  ECIGLCNDIIAEEIDREET 58


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,202,152
Number of Sequences: 219361
Number of extensions: 647087
Number of successful extensions: 1784
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1784
length of database: 80,573,946
effective HSP length: 55
effective length of database: 68,509,091
effective search space used: 1644218184
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)