| Clone Name | rbags4m06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY677177.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS1) mRNA, complete cds Length = 1433 Score = 1415 bits (714), Expect = 0.0 Identities = 721/722 (99%), Gaps = 1/722 (0%) Strand = Plus / Minus Query: 1 ggccttgtatataaagtttctaataatacaatcttt-aagtgaacgacaaaggtgtaatt 59 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1301 ggccttgtatataaagtttctaataatacaatctttcaagtgaacgacaaaggtgtaatt 1242 Query: 60 ggtttattggaactcaaattccgtaacgaaacacagcaacgaatattgacgaacccaccc 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1241 ggtttattggaactcaaattccgtaacgaaacacagcaacgaatattgacgaacccaccc 1182 Query: 120 aactatgagtatgctctggcaaattggtgatgtacgccaaacgcagggaagtggccttag 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1181 aactatgagtatgctctggcaaattggtgatgtacgccaaacgcagggaagtggccttag 1122 Query: 180 gccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcaccaag 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1121 gccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcaccaag 1062 Query: 240 ccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtgatgtca 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1061 ccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtgatgtca 1002 Query: 300 ggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacctctggg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1001 ggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacctctggg 942 Query: 360 ttgatcaactccttcacgttctcagcaagttccagcatggtgaattcacctgggttccca 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 941 ttgatcaactccttcacgttctcagcaagttccagcatggtgaattcacctgggttccca 882 Query: 420 atgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgaccatatca 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 881 atgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgaccatatca 822 Query: 480 gcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcacca 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 821 gcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcacca 762 Query: 540 cgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggt 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 cgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggt 702 Query: 600 ccataggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcg 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 ccataggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcg 642 Query: 660 aacatcagtgtctcagctacacgcttaccctcatcgtagcagctcctgactccaattggg 719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 aacatcagtgtctcagctacacgcttaccctcatcgtagcagctcctgactccaattggg 582 Query: 720 tt 721 || Sbjct: 581 tt 580
>emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-glucose dehydratase (tgp gene) Length = 1562 Score = 686 bits (346), Expect = 0.0 Identities = 496/546 (90%) Strand = Plus / Minus Query: 176 ttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcac 235 ||||||||| | || ||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 1291 ttaggccttagtctccttgggcacagccaggcgctcccggaagtcatcctccatgagcac 1232 Query: 236 caagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtgat 295 |||||||||||| || |||||||| |||||||| | ||||| ||||| ||||||||||| Sbjct: 1231 caagccgtcacgcagaacgaccttaggctcccaccccagaacttccttcgcctttgtgat 1172 Query: 296 gtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacctc 355 ||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 1171 gtctggcttcctctggcgaggatcatcaggagtgttctcggtcatcgtcactgtcacctc 1112 Query: 356 tgggttgatcaactccttcacgttctcagcaagttccagcatggtgaattcacctgggtt 415 ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 1111 tgggttgatcaactctttcactttctcagcaagttccagcatggtaaattcacctgggtt 1052 Query: 416 cccaatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgaccat 475 || | ||||| ||||||||||||| ||||||||||||||| |||||||||| ||||| Sbjct: 1051 gcccaaattaatcggtccagtgttgtttccattcatcagcttaataagaccatcaaccat 992 Query: 476 atcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggcttc 535 ||| || |||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 991 atcggcgacgtagcagaagctcctagtctgtgttcctggcttctggacagtcaaggggtc 932 Query: 536 accacgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcct 595 |||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 931 accacgcacagcctgagcaatgaagttgctaacaacacgcccatcatcaatgttcatcct 872 Query: 596 aggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggta 655 ||| ||||||||||||||||||| |||||| ||||| |||||||| |||||||||||||| Sbjct: 871 aggcccataggtgttgaaaatccgggcaattcggatttcaatgccatgctgcctgtggta 812 Query: 656 gtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagctcctgactccaat 715 ||| |||||||| ||||| |||||||||||||||||||| || ||||||||||||||||| Sbjct: 811 gtcaaacatcagcgtctctgctacacgcttaccctcatcataacagctcctgactccaat 752 Query: 716 tgggtt 721 |||||| Sbjct: 751 tgggtt 746 Score = 63.9 bits (32), Expect = 7e-07 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 24 taatacaatcttt-aagtgaacgacaaaggtgtaattggtttattggaactcaaattccg 82 ||||||||||||| || |||||||||| | |||| | |||||||||||||||||||||| Sbjct: 1419 taatacaatctttcaattgaacgacaacgatgtattcagtttattggaactcaaattccg 1360 Query: 83 taacgaaa 90 ||| |||| Sbjct: 1359 taatgaaa 1352
>dbj|AB079064.1| Oryza sativa (japonica cultivar-group) UXS-3 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1053 Score = 632 bits (319), Expect = e-178 Identities = 466/515 (90%) Strand = Plus / Minus Query: 207 cgctcccggaagtcgtcctccatgagcaccaagccgtcacgtaggacgaccttgggctcc 266 ||||||||||| || || ||||||||||||||||| ||||| || |||| |||||||||| Sbjct: 1022 cgctcccggaaatcatcttccatgagcaccaagccatcacgcagaacgatcttgggctcc 963 Query: 267 cagtcaagaacctcctttgcctttgtgatgtcaggcttcctctggcgagggtcatcagga 326 || | | ||| |||||||||||||| ||||| ||||||||||| ||||| ||||||||| Sbjct: 962 caccccaaaacttcctttgcctttgtaatgtctggcttcctctgacgaggatcatcagga 903 Query: 327 gtgttctcagtcatcgtcactgtcacctctgggttgatcaactccttcacgttctcagca 386 |||||||||||||| || || || |||||||||||||||||||||||||| ||||||||| Sbjct: 902 gtgttctcagtcattgtgacggtaacctctgggttgatcaactccttcacattctcagca 843 Query: 387 agttccagcatggtgaattcacctgggttcccaatgttaatgggtccagtgttgtctcca 446 ||||||||||||||||||||||||||||| || | ||||| |||||||||||||| || Sbjct: 842 agttccagcatggtgaattcacctgggtttcccaaattaattggtccagtgttgtccccg 783 Query: 447 ttcatcagcttcataagaccattgaccatatcagcaacgtagcagaagctcctagtctgt 506 ||||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||| ||| Sbjct: 782 ttcatcagcttaataagaccattaaccatgtcagcaacatagcagaagctcctagtttgt 723 Query: 507 gttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagttacta 566 |||||||||||||| |||||||||| || ||||||| |||||||||||||||||||||| Sbjct: 722 gttcctggcttctgaacagtcaggggctcgccacgtacggcctgagcaatgaagttacta 663 Query: 567 acaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggcaata 626 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 acaacacgcccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggcaatt 603 Query: 627 cggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgctta 686 |||||||||||||| ||||||||||| ||||| ||||||||||| || || ||||||||| Sbjct: 602 cggatctcaatgccatgctgcctgtgatagtcaaacatcagtgtttctgcgacacgctta 543 Query: 687 ccctcatcgtagcagctcctgactccaattgggtt 721 ||||| || ||||| |||||||||||||||||||| Sbjct: 542 ccctcgtcatagcaactcctgactccaattgggtt 508
>dbj|AK100908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132F05, full insert sequence Length = 1811 Score = 632 bits (319), Expect = e-178 Identities = 490/547 (89%) Strand = Plus / Minus Query: 175 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 234 ||||||||| | ||||||||||||| | ||||||||||| || || |||||||||| Sbjct: 1542 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 1483 Query: 235 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 294 ||||||| ||||| || |||| |||||||||||| | | ||| |||||||||||||| | Sbjct: 1482 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 1423 Query: 295 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 354 |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 1422 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 1363 Query: 355 ctgggttgatcaactccttcacgttctcagcaagttccagcatggtgaattcacctgggt 414 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1362 ctgggttgatcaactccttcacattctcagcaagttccagcatggtgaattcacctgggt 1303 Query: 415 tcccaatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgacca 474 | || | ||||| |||||||||||||| || ||||||||||| ||||||||||| |||| Sbjct: 1302 ttcccaaattaattggtccagtgttgtccccgttcatcagcttaataagaccattaacca 1243 Query: 475 tatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggctt 534 | |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| | Sbjct: 1242 tgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtcaggggct 1183 Query: 535 caccacgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcc 594 | ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1182 cgccacgtacggcctgagcaatgaagttactaacaacacgcccatcatcaatgttcatcc 1123 Query: 595 taggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggt 654 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| | Sbjct: 1122 taggtccataggtgttgaaaatcctggcaattcggatctcaatgccatgctgcctgtgat 1063 Query: 655 agtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagctcctgactccaa 714 |||| ||||||||||| || || |||||||||||||| || ||||| ||||||||||||| Sbjct: 1062 agtcaaacatcagtgtttctgcgacacgcttaccctcgtcatagcaactcctgactccaa 1003 Query: 715 ttgggtt 721 ||||||| Sbjct: 1002 ttgggtt 996
>dbj|AK060031.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H02, full insert sequence Length = 1411 Score = 632 bits (319), Expect = e-178 Identities = 490/547 (89%) Strand = Plus / Minus Query: 175 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 234 ||||||||| | ||||||||||||| | ||||||||||| || || |||||||||| Sbjct: 1153 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 1094 Query: 235 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 294 ||||||| ||||| || |||| |||||||||||| | | ||| |||||||||||||| | Sbjct: 1093 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 1034 Query: 295 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 354 |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 1033 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 974 Query: 355 ctgggttgatcaactccttcacgttctcagcaagttccagcatggtgaattcacctgggt 414 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 973 ctgggttgatcaactccttcacattctcagcaagttccagcatggtgaattcacctgggt 914 Query: 415 tcccaatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgacca 474 | || | ||||| |||||||||||||| || ||||||||||| ||||||||||| |||| Sbjct: 913 ttcccaaattaattggtccagtgttgtccccgttcatcagcttaataagaccattaacca 854 Query: 475 tatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggctt 534 | |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| | Sbjct: 853 tgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtcaggggct 794 Query: 535 caccacgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcc 594 | ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 793 cgccacgtacggcctgagcaatgaagttactaacaacacgcccatcatcaatgttcatcc 734 Query: 595 taggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggt 654 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| | Sbjct: 733 taggtccataggtgttgaaaatcctggcaattcggatctcaatgccatgctgcctgtgat 674 Query: 655 agtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagctcctgactccaa 714 |||| ||||||||||| || || |||||||||||||| || ||||| ||||||||||||| Sbjct: 673 agtcaaacatcagtgtttctgcgacacgcttaccctcgtcatagcaactcctgactccaa 614 Query: 715 ttgggtt 721 ||||||| Sbjct: 613 ttgggtt 607
>gb|AY104952.1| Zea mays PCO092342 mRNA sequence Length = 1825 Score = 607 bits (306), Expect = e-170 Identities = 486/546 (89%) Strand = Plus / Minus Query: 176 ttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcac 235 ||||||||||| ||||||||||| |||| ||||||||||| || |||||||||||||| Sbjct: 1535 ttaggccttggttttcttgggcacggccaggcgctcccggaaatcatcctccatgagcac 1476 Query: 236 caagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtgat 295 ||||||||| ||||||| |||||||||||| | ||||| ||||||||||| ||||| Sbjct: 1475 caagccgtccttcaggacgatcttgggctcccaccctagaacttcctttgccttggtgat 1416 Query: 296 gtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacctc 355 ||| |||||||||||||| || ||||||||||||||||| |||||||||||||| | || Sbjct: 1415 gtccggcttcctctggcggggatcatcaggagtgttctcggtcatcgtcactgttatatc 1356 Query: 356 tgggttgatcaactccttcacgttctcagcaagttccagcatggtgaattcacctgggtt 415 |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1355 tgggttaatcaactccttcacattctcagcaagttccagcatggtgaattcacctgggtt 1296 Query: 416 cccaatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgaccat 475 ||| | |||||| ||||||||||||| ||| ||||||||| | |||||||||| ||||| Sbjct: 1295 ccccaagttaatcggtccagtgttgtttccgttcatcagcctaataagaccatcaaccat 1236 Query: 476 atcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggcttc 535 ||| || || ||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 1235 atcggcgacatagcagaagctcctagtctgtgttcctggcttctggacagtaaggggttc 1176 Query: 536 accacgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcct 595 ||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1175 gccacgcacagcctgagcaatgaagttgctaacaacacggccatcgtcaatgttcatcct 1116 Query: 596 aggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggta 655 || |||||||||||||||||||||||||| ||||| |||||||| ||||||||||| || Sbjct: 1115 tggcccataggtgttgaaaatcctggcaattcggatttcaatgccatgctgcctgtgata 1056 Query: 656 gtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagctcctgactccaat 715 |||||||||||| ||||| |||||||||||||||||||| || || ||||| || ||||| Sbjct: 1055 gtcgaacatcagcgtctctgctacacgcttaccctcatcataacaactcctaacaccaat 996 Query: 716 tgggtt 721 ||||| Sbjct: 995 cgggtt 990 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 61 gtttattggaactcaaattccgtaacgaaa 90 ||||||||||||||||||||||||| |||| Sbjct: 1639 gtttattggaactcaaattccgtaatgaaa 1610
>gb|BT019083.1| Zea mays clone Contig672.F mRNA sequence Length = 958 Score = 583 bits (294), Expect = e-163 Identities = 459/514 (89%) Strand = Plus / Minus Query: 208 gctcccggaagtcgtcctccatgagcaccaagccgtcacgtaggacgaccttgggctccc 267 |||||||||| || ||||||||||||||||||||||| | |||| || |||||||||| Sbjct: 787 gctcccggaaatcatcctccatgagcaccaagccgtcccccaggaagattttgggctccc 728 Query: 268 agtcaagaacctcctttgcctttgtgatgtcaggcttcctctggcgagggtcatcaggag 327 | | | ||| ||||| |||||||||| || ||||||||||| || ||||||||||||| Sbjct: 727 atcccaaaacttccttcccctttgtgatatccggcttcctctgacgggggtcatcaggag 668 Query: 328 tgttctcagtcatcgtcactgtcacctctgggttgatcaactccttcacgttctcagcaa 387 ||||||| ||||| ||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 667 tgttctcggtcattgtcactgtcacatctgggttgatcaactccttcacattctcagcaa 608 Query: 388 gttccagcatggtgaattcacctgggttcccaatgttaatgggtccagtgttgtctccat 447 ||||||||||||||||||||||||||||||| | |||||| |||||||| |||| ||||| Sbjct: 607 gttccagcatggtgaattcacctgggttccccaagttaatcggtccagtcttgtttccat 548 Query: 448 tcatcagcttcataagaccattgaccatatcagcaacgtagcagaagctcctagtctgtg 507 |||||||||| |||||||||| |||||||| ||||| |||||||| ||||||||||||| Sbjct: 547 tcatcagcttaataagaccatcaaccatatcggcaacatagcagaaactcctagtctgtg 488 Query: 508 ttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagttactaa 567 |||||||| ||||||||||||||| ||||| || | ||||||||||||||||| |||| Sbjct: 487 ttcctggcctctggacagtcaggggctcaccgcgcacagcctgagcaatgaagttgctaa 428 Query: 568 caacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggcaatac 627 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 427 caacacggccatcatcaatgttcatcctaggcccataggtgttgaaaatcctggcaatcc 368 Query: 628 ggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgcttac 687 |||| |||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 367 ggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttac 308 Query: 688 cctcatcgtagcagctcctgactccaattgggtt 721 ||||||| || || ||||| || ||||| ||||| Sbjct: 307 cctcatcataacaactcctaacaccaatcgggtt 274 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 ttggaactcaaattccgtaacgaaa 90 |||||||||||||||||||| |||| Sbjct: 921 ttggaactcaaattccgtaatgaaa 897
>dbj|AK061632.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-A03, full insert sequence Length = 472 Score = 180 bits (91), Expect = 4e-42 Identities = 178/207 (85%) Strand = Plus / Minus Query: 175 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 234 ||||||||| | ||||||||||||| | ||||||||||| || || |||||||||| Sbjct: 207 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 148 Query: 235 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 294 ||||||| ||||| || |||| | |||||||||| | | |||||||||||||||||| | Sbjct: 147 ccaagccatcacgcagaacgatcctgggctcccaccccaaaacctcctttgcctttgtaa 88 Query: 295 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 354 |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 87 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 28 Query: 355 ctgggttgatcaactccttcacgttct 381 |||||||||||||||||||||| |||| Sbjct: 27 ctgggttgatcaactccttcacattct 1
>gb|AY087118.1| Arabidopsis thaliana clone 31901 mRNA, complete sequence Length = 1281 Score = 176 bits (89), Expect = 7e-41 Identities = 260/317 (82%) Strand = Plus / Minus Query: 405 tcacctgggttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataaga 464 ||||||||||| || ||||| ||||| ||||||| ||||| | ||| || |||||| Sbjct: 867 tcacctgggttaccgatgttgatgggaccagtgtcatctccttccatgaggcgcataagt 808 Query: 465 ccattgaccatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggaca 524 |||| ||||| |||| || || ||||| || | ||||||||| ||||| ||||| ||| Sbjct: 807 ccatcaaccatgtcagatacataacagaaactgcgagtctgtgtccctggtttctgaaca 748 Query: 525 gtcagggcttcaccacgtatggcctgagcaatgaagttactaacaacacggccatcatca 584 |||| || |||||||| | || |||||||||||||| || |||||||| ||||||||| Sbjct: 747 gtcaatgcctcaccacggagtgcttgagcaatgaagttgcttacaacacgtccatcatca 688 Query: 585 atgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgc 644 |||||||| | || ||||| |||||||| || |||||||| ||||| ||||| || ||| Sbjct: 687 atgttcatgcgtggaccataagtgttgaagattctggcaatgcggatttcaattccatgc 628 Query: 645 tgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagctc 704 |||||||||||||| ||||||| |||||||| |||||||| || ||||| || |||||| Sbjct: 627 tgcctgtggtagtcaaacatcaaggtctcagcaacacgcttgccttcatcataacagctc 568 Query: 705 ctgactccaattgggtt 721 || || ||||||||||| Sbjct: 567 ctaacaccaattgggtt 551 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 335 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 987 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 937
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 165 bits (83), Expect = 3e-37 Identities = 167/195 (85%) Strand = Plus / Minus Query: 175 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 234 ||||||||| | ||||||||||||| | ||||||||||| || || |||||||||| Sbjct: 9412292 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 9412233 Query: 235 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 294 ||||||| ||||| || |||| |||||||||||| | | ||| |||||||||||||| | Sbjct: 9412232 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 9412173 Query: 295 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 354 |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 9412172 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 9412113 Query: 355 ctgggttgatcaact 369 ||||||||||||||| Sbjct: 9412112 ctgggttgatcaact 9412098 Score = 165 bits (83), Expect = 3e-37 Identities = 92/95 (96%) Strand = Plus / Minus Query: 540 cgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggt 599 |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 9411539 cgtacggcctgagcaatgaagttactaacaacacgcccatcatcaatgttcatcctaggt 9411480 Query: 600 ccataggtgttgaaaatcctggcaatacggatctc 634 |||||||||||||||||||||||||| |||||||| Sbjct: 9411479 ccataggtgttgaaaatcctggcaattcggatctc 9411445 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 471 accatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagg 530 ||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 9411692 accatgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtcagg 9411633 Query: 531 g 531 | Sbjct: 9411632 g 9411632 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 634 caatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcat 693 ||||||| ||||||||||| ||||| ||||||||||| || || |||||||||||||| | Sbjct: 9411358 caatgccatgctgcctgtgatagtcaaacatcagtgtttctgcgacacgcttaccctcgt 9411299 Query: 694 cgtagcagctcctgactcc 712 | ||||| ||||||||||| Sbjct: 9411298 catagcaactcctgactcc 9411280 Score = 77.8 bits (39), Expect = 5e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 368 ctccttcacgttctcagcaagttccagcatggtgaattcacct 410 ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9412015 ctccttcacattctcagcaagttccagcatggtgaattcacct 9411973 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 423 ttaatgggtccagtgttgtctccattcatcagcttcataagaccatt 469 ||||| |||||||||||||| || ||||||||||| ||||||||||| Sbjct: 9411835 ttaattggtccagtgttgtccccgttcatcagcttaataagaccatt 9411789
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 165 bits (83), Expect = 3e-37 Identities = 167/195 (85%) Strand = Plus / Minus Query: 175 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 234 ||||||||| | ||||||||||||| | ||||||||||| || || |||||||||| Sbjct: 109692 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 109633 Query: 235 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 294 ||||||| ||||| || |||| |||||||||||| | | ||| |||||||||||||| | Sbjct: 109632 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 109573 Query: 295 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 354 |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 109572 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 109513 Query: 355 ctgggttgatcaact 369 ||||||||||||||| Sbjct: 109512 ctgggttgatcaact 109498 Score = 165 bits (83), Expect = 3e-37 Identities = 92/95 (96%) Strand = Plus / Minus Query: 540 cgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggt 599 |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 108939 cgtacggcctgagcaatgaagttactaacaacacgcccatcatcaatgttcatcctaggt 108880 Query: 600 ccataggtgttgaaaatcctggcaatacggatctc 634 |||||||||||||||||||||||||| |||||||| Sbjct: 108879 ccataggtgttgaaaatcctggcaattcggatctc 108845 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 471 accatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagg 530 ||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 109092 accatgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtcagg 109033 Query: 531 g 531 | Sbjct: 109032 g 109032 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 634 caatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcat 693 ||||||| ||||||||||| ||||| ||||||||||| || || |||||||||||||| | Sbjct: 108758 caatgccatgctgcctgtgatagtcaaacatcagtgtttctgcgacacgcttaccctcgt 108699 Query: 694 cgtagcagctcctgactcc 712 | ||||| ||||||||||| Sbjct: 108698 catagcaactcctgactcc 108680 Score = 77.8 bits (39), Expect = 5e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 368 ctccttcacgttctcagcaagttccagcatggtgaattcacct 410 ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 109415 ctccttcacattctcagcaagttccagcatggtgaattcacct 109373 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 423 ttaatgggtccagtgttgtctccattcatcagcttcataagaccatt 469 ||||| |||||||||||||| || ||||||||||| ||||||||||| Sbjct: 109235 ttaattggtccagtgttgtccccgttcatcagcttaataagaccatt 109189
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 165 bits (83), Expect = 3e-37 Identities = 167/195 (85%) Strand = Plus / Minus Query: 175 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 234 ||||||||| | ||||||||||||| | ||||||||||| || || |||||||||| Sbjct: 9410413 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 9410354 Query: 235 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 294 ||||||| ||||| || |||| |||||||||||| | | ||| |||||||||||||| | Sbjct: 9410353 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 9410294 Query: 295 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 354 |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 9410293 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 9410234 Query: 355 ctgggttgatcaact 369 ||||||||||||||| Sbjct: 9410233 ctgggttgatcaact 9410219 Score = 165 bits (83), Expect = 3e-37 Identities = 92/95 (96%) Strand = Plus / Minus Query: 540 cgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggt 599 |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 9409660 cgtacggcctgagcaatgaagttactaacaacacgcccatcatcaatgttcatcctaggt 9409601 Query: 600 ccataggtgttgaaaatcctggcaatacggatctc 634 |||||||||||||||||||||||||| |||||||| Sbjct: 9409600 ccataggtgttgaaaatcctggcaattcggatctc 9409566 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 471 accatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagg 530 ||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 9409813 accatgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtcagg 9409754 Query: 531 g 531 | Sbjct: 9409753 g 9409753 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 634 caatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcat 693 ||||||| ||||||||||| ||||| ||||||||||| || || |||||||||||||| | Sbjct: 9409479 caatgccatgctgcctgtgatagtcaaacatcagtgtttctgcgacacgcttaccctcgt 9409420 Query: 694 cgtagcagctcctgactcc 712 | ||||| ||||||||||| Sbjct: 9409419 catagcaactcctgactcc 9409401 Score = 77.8 bits (39), Expect = 5e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 368 ctccttcacgttctcagcaagttccagcatggtgaattcacct 410 ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9410136 ctccttcacattctcagcaagttccagcatggtgaattcacct 9410094 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 423 ttaatgggtccagtgttgtctccattcatcagcttcataagaccatt 469 ||||| |||||||||||||| || ||||||||||| ||||||||||| Sbjct: 9409956 ttaattggtccagtgttgtccccgttcatcagcttaataagaccatt 9409910
>gb|AY922315.1| Populus tomentosa UDP-glucuronic acid decarboxylase 3 (UXS3) mRNA, complete cds Length = 1129 Score = 149 bits (75), Expect = 1e-32 Identities = 282/351 (80%) Strand = Plus / Minus Query: 368 ctccttcacgttctcagcaagttccagcatggtgaattcacctgggttcccaatgttaat 427 ||||||||| |||||||||| || |||||| ||||| |||||||| |||||||| || Sbjct: 893 ctccttcactgtctcagcaagctcggtcatggtaaattcccctgggtttccaatgttgat 834 Query: 428 gggtccagtgttgtctccattcatcagcttcataagaccattgaccatatcagcaacgta 487 ||||||||||| ||||| | ||| || ||||| |||| ||||| |||| ||||| Sbjct: 833 tggtccagtgttctctccttccatgaggcgaataaggccatcaaccatgtcagagacgta 774 Query: 488 gcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcaccacgtatggc 547 |||||| || | ||| || ||||| ||||| || || |||| | ||||||||| | || Sbjct: 773 gcagaaactgcgagtttgagttccaggcttttgaactgtcaatggttcaccacgaagtgc 714 Query: 548 ctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggt 607 |||||||||||||| || |||||||| ||||||||||| ||||| | |||||||| || Sbjct: 713 ttgagcaatgaagttgctcacaacacgcccatcatcaatattcatacgcggtccatatgt 654 Query: 608 gttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcag 667 ||||||||| || ||||| || | || || || || ||||| || ||||| ||||||| Sbjct: 653 gttgaaaattctagcaatgcgaaattctatcccatgttgcctatgatagtcaaacatcaa 594 Query: 668 tgtctcagctacacgcttaccctcatcgtagcagctcctgactccaattgg 718 ||||||||| |||||||| |||||||| |||||||||| || |||||||| Sbjct: 593 tgtctcagccacacgcttcccctcatcatagcagctccgaaccccaattgg 543 Score = 61.9 bits (31), Expect = 3e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 280 cctttgcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctc 334 ||||||||||||| |||||||| |||||||| || || ||||||||||| ||||| Sbjct: 981 cctttgcctttgtaatgtcaggtttcctctgtcgtggatcatcaggagtattctc 927
>ref|NM_114511.2| Arabidopsis thaliana UXS5; catalytic AT3G46440 (UXS5) transcript variant AT3G46440.1 mRNA, complete cds Length = 1374 Score = 145 bits (73), Expect = 2e-31 Identities = 256/317 (80%) Strand = Plus / Minus Query: 405 tcacctgggttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataaga 464 ||||||||||| || ||||| ||||| ||||||| ||||| | ||| || |||||| Sbjct: 931 tcacctgggttaccgatgttgatgggaccagtgtcatctccttccatgaggcgcataagt 872 Query: 465 ccattgaccatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggaca 524 |||| ||||| |||| || || ||||| || | ||||||||| ||||| ||||| ||| Sbjct: 871 ccatcaaccatgtcagatacataacagaaactgcgagtctgtgtccctggtttctgaaca 812 Query: 525 gtcagggcttcaccacgtatggcctgagcaatgaagttactaacaacacggccatcatca 584 |||| || ||||| || | || || ||||||||||| || ||||||||||||||||| Sbjct: 811 gtcaatgcctcaccccggagtgcttgtgcaatgaagttgcttacaacacggccatcatcg 752 Query: 585 atgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgc 644 |||||||| | || ||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 751 atgttcatgcgtggaccataagtgttgaagattctagcaatgcggatttcaattccatgt 692 Query: 645 tgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagctc 704 |||||||||||||| ||||||| |||||||| |||||||| || ||||| || |||||| Sbjct: 691 tgcctgtggtagtcaaacatcaaggtctcagcaacacgcttgccttcatcataacagctc 632 Query: 705 ctgactccaattgggtt 721 || || ||||||||||| Sbjct: 631 ctaacaccaattgggtt 615 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 335 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 1051 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 1001
>ref|NM_001035743.1| Arabidopsis thaliana UXS5; catalytic AT3G46440 (UXS5) transcript variant AT3G46440.2 mRNA, complete cds Length = 1464 Score = 145 bits (73), Expect = 2e-31 Identities = 256/317 (80%) Strand = Plus / Minus Query: 405 tcacctgggttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataaga 464 ||||||||||| || ||||| ||||| ||||||| ||||| | ||| || |||||| Sbjct: 1021 tcacctgggttaccgatgttgatgggaccagtgtcatctccttccatgaggcgcataagt 962 Query: 465 ccattgaccatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggaca 524 |||| ||||| |||| || || ||||| || | ||||||||| ||||| ||||| ||| Sbjct: 961 ccatcaaccatgtcagatacataacagaaactgcgagtctgtgtccctggtttctgaaca 902 Query: 525 gtcagggcttcaccacgtatggcctgagcaatgaagttactaacaacacggccatcatca 584 |||| || ||||| || | || || ||||||||||| || ||||||||||||||||| Sbjct: 901 gtcaatgcctcaccccggagtgcttgtgcaatgaagttgcttacaacacggccatcatcg 842 Query: 585 atgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgc 644 |||||||| | || ||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 841 atgttcatgcgtggaccataagtgttgaagattctagcaatgcggatttcaattccatgt 782 Query: 645 tgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagctc 704 |||||||||||||| ||||||| |||||||| |||||||| || ||||| || |||||| Sbjct: 781 tgcctgtggtagtcaaacatcaaggtctcagcaacacgcttgccttcatcataacagctc 722 Query: 705 ctgactccaattgggtt 721 || || ||||||||||| Sbjct: 721 ctaacaccaattgggtt 705 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 335 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 1141 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 1091
>gb|AY096586.1| Arabidopsis thaliana putative dTDP-glucose 4-6-dehydratases (At3g46440) mRNA, complete cds Length = 1057 Score = 145 bits (73), Expect = 2e-31 Identities = 256/317 (80%) Strand = Plus / Minus Query: 405 tcacctgggttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataaga 464 ||||||||||| || ||||| ||||| ||||||| ||||| | ||| || |||||| Sbjct: 806 tcacctgggttaccgatgttgatgggaccagtgtcatctccttccatgaggcgcataagt 747 Query: 465 ccattgaccatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggaca 524 |||| ||||| |||| || || ||||| || | ||||||||| ||||| ||||| ||| Sbjct: 746 ccatcaaccatgtcagatacataacagaaactgcgagtctgtgtccctggtttctgaaca 687 Query: 525 gtcagggcttcaccacgtatggcctgagcaatgaagttactaacaacacggccatcatca 584 |||| || ||||| || | || || ||||||||||| || ||||||||||||||||| Sbjct: 686 gtcaatgcctcaccccggagtgcttgtgcaatgaagttgcttacaacacggccatcatcg 627 Query: 585 atgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgc 644 |||||||| | || ||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 626 atgttcatgcgtggaccataagtgttgaagattctagcaatgcggatttcaattccatgt 567 Query: 645 tgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagctc 704 |||||||||||||| ||||||| |||||||| |||||||| || ||||| || |||||| Sbjct: 566 tgcctgtggtagtcaaacatcaaggtctcagcaacacgcttgccttcatcataacagctc 507 Query: 705 ctgactccaattgggtt 721 || || ||||||||||| Sbjct: 506 ctaacaccaattgggtt 490 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 335 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 926 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 876
>gb|AY072098.1| Arabidopsis thaliana putative dTDP-glucose 4-6-dehydratase (At3g46440) mRNA, complete cds Length = 1356 Score = 145 bits (73), Expect = 2e-31 Identities = 256/317 (80%) Strand = Plus / Minus Query: 405 tcacctgggttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataaga 464 ||||||||||| || ||||| ||||| ||||||| ||||| | ||| || |||||| Sbjct: 931 tcacctgggttaccgatgttgatgggaccagtgtcatctccttccatgaggcgcataagt 872 Query: 465 ccattgaccatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggaca 524 |||| ||||| |||| || || ||||| || | ||||||||| ||||| ||||| ||| Sbjct: 871 ccatcaaccatgtcagatacataacagaaactgcgagtctgtgtccctggtttctgaaca 812 Query: 525 gtcagggcttcaccacgtatggcctgagcaatgaagttactaacaacacggccatcatca 584 |||| || ||||| || | || || ||||||||||| || ||||||||||||||||| Sbjct: 811 gtcaatgcctcaccccggagtgcttgtgcaatgaagttgcttacaacacggccatcatcg 752 Query: 585 atgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgc 644 |||||||| | || ||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 751 atgttcatgcgtggaccataagtgttgaagattctagcaatgcggatttcaattccatgt 692 Query: 645 tgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagctc 704 |||||||||||||| ||||||| |||||||| |||||||| || ||||| || |||||| Sbjct: 691 tgcctgtggtagtcaaacatcaaggtctcagcaacacgcttgccttcatcataacagctc 632 Query: 705 ctgactccaattgggtt 721 || || ||||||||||| Sbjct: 631 ctaacaccaattgggtt 615 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 335 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 1051 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 1001
>emb|BX824968.1|CNS0A6QT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH86ZD03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1211 Score = 137 bits (69), Expect = 6e-29 Identities = 255/317 (80%) Strand = Plus / Minus Query: 405 tcacctgggttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataaga 464 ||||||||||| || ||||| ||||| ||||||| ||||| | ||| || |||||| Sbjct: 830 tcacctgggttaccgatgttgatgggaccagtgtcatctccttccatgaggcgcataagt 771 Query: 465 ccattgaccatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggaca 524 |||| ||||| |||| || || ||||| || | ||| ||||| ||||| ||||| ||| Sbjct: 770 ccatcaaccatgtcagatacataacagaaactgcgagtgtgtgtccctggtttctgaaca 711 Query: 525 gtcagggcttcaccacgtatggcctgagcaatgaagttactaacaacacggccatcatca 584 |||| || ||||| || | || || ||||||||||| || ||||||||||||||||| Sbjct: 710 gtcaatgcctcaccccggagtgcttgtgcaatgaagttgcttacaacacggccatcatcg 651 Query: 585 atgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgc 644 |||||||| | || ||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 650 atgttcatgcgtggaccataagtgttgaagattctagcaatgcggatttcaattccatgt 591 Query: 645 tgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagctc 704 |||||||||||||| ||||||| |||||||| |||||||| || ||||| || |||||| Sbjct: 590 tgcctgtggtagtcaaacatcaaggtctcagcaacacgcttgccttcatcataacagctc 531 Query: 705 ctgactccaattgggtt 721 || || ||||||||||| Sbjct: 530 ctaacaccaattgggtt 514 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 335 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 950 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 900
>gb|AY619950.1| Nicotiana tabacum UDP-glucuronate decarboxylase 1 mRNA, complete cds Length = 1279 Score = 129 bits (65), Expect = 1e-26 Identities = 248/309 (80%) Strand = Plus / Minus Query: 368 ctccttcacgttctcagcaagttccagcatggtgaattcacctgggttcccaatgttaat 427 ||||||||| ||||| || ||||| | ||| |||||||||||||| || ||||||||||| Sbjct: 878 ctccttcacattctccgcgagttcaatcatcgtgaattcacctggatttccaatgttaat 819 Query: 428 gggtccagtgttgtctccattcatcagcttcataagaccattgaccatatcagcaacgta 487 ||||||||||| ||||| | ||| ||| ||||| |||| ||||| |||| || || Sbjct: 818 tggtccagtgttatctccctccataagccgaataaggccatcaaccatgtcagagacata 759 Query: 488 gcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcaccacgtatggc 547 || ||||| | || |||||||||||| ||||||||||| |||||| |||| || || Sbjct: 758 acaaaagctgcgtgtttgtgttcctggcaactggacagtcaacgcttcatcacgaattgc 699 Query: 548 ctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggt 607 || ||||||||||| || |||||||| ||||||||||| ||||| | ||| ||||| || Sbjct: 698 ttgggcaatgaagttgctgacaacacgaccatcatcaatattcattcgaggaccataagt 639 Query: 608 gttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcag 667 ||||| || || ||||| ||||| ||||| || || || ||||| || || ||||||| Sbjct: 638 attgaagattctagcaattcggatttcaattccatgttgtctgtgataatcaaacatcaa 579 Query: 668 tgtctcagc 676 |||||||| Sbjct: 578 agtctcagc 570 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 282 tttgcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgtt 331 ||||||||||||||||| || || ||||| ||||| ||||| |||||||| Sbjct: 964 tttgcctttgtgatgtccggttttctctgccgaggatcatctggagtgtt 915
>gb|AY963839.1| Cucumis sativus putative nucleotide sugar epimerase mRNA, partial cds Length = 416 Score = 119 bits (60), Expect = 1e-23 Identities = 147/176 (83%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 |||||||||| |||||| ||||||||||| || |||||||| ||||| || |||||||| Sbjct: 384 gcctgagcaaggaagttgctaacaacacgaccgtcatcaatattcattctcggtccatat 325 Query: 606 gtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatc 665 |||||||||||||| ||||| | |||||||| || ||||||||||| || || |||||| Sbjct: 324 gtgttgaaaatcctagcaattcttatctcaatcccatgctgcctgtgataatcaaacatc 265 Query: 666 agtgtctcagctacacgcttaccctcatcgtagcagctcctgactccaattgggtt 721 | ||| || || ||||| || || ||||||||||| || || || || |||||||| Sbjct: 264 aatgtttccgccacacgttttccttcatcgtagcaacttctaacaccgattgggtt 209
>gb|AY429442.1| Gossypium barbadense fiber dTDP-glucose 4-6-dehydratase mRNA, partial cds Length = 872 Score = 113 bits (57), Expect = 8e-22 Identities = 132/157 (84%) Strand = Plus / Minus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 608 ||||||||||| || || |||||||| ||||||||||||||||||| || ||||| ||| Sbjct: 180 tgagcaatgaaattgcttacaacacgcccatcatcaatgttcatccgtggcccatatgtg 121 Query: 609 ttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcagt 668 ||||| || || ||||| |||||||| || || |||||||| ||||| || ||||| || Sbjct: 120 ttgaagattctagcaatgcggatctctatcccatgctgcctatggtaatcaaacattagg 61 Query: 669 gtctcagctacacgcttaccctcatcgtagcagctcc 705 |||||||| |||||||| || ||||| ||||| |||| Sbjct: 60 gtctcagccacacgcttcccttcatcatagcaactcc 24 Score = 42.1 bits (21), Expect = 2.5 Identities = 51/61 (83%) Strand = Plus / Minus Query: 379 tctcagcaagttccagcatggtgaattcacctgggttcccaatgttaatgggtccagtgt 438 |||| ||||| || |||||||| ||||||||||| ||||| || || || || ||||||| Sbjct: 350 tctcggcaagctcaagcatggtaaattcacctggattcccgatattgattggaccagtgt 291 Query: 439 t 439 | Sbjct: 290 t 290
>gb|U82433.1|PAU82433 Prunus armeniaca thymidine diphospho-glucose 4-6-dehydratase homolog mRNA, partial cds Length = 1012 Score = 113 bits (57), Expect = 8e-22 Identities = 135/161 (83%) Strand = Plus / Minus Query: 555 atgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaa 614 ||||| ||||| |||||||| ||||||||||| ||||| | |||||| || ||||||||| Sbjct: 426 atgaaattactgacaacacgaccatcatcaatattcatgcgaggtccgtaagtgttgaaa 367 Query: 615 atcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctca 674 ||||| ||||| | ||||| || || ||||||||||| || || ||||||| ||| ||| Sbjct: 366 atcctagcaatccttatctctatcccatgctgcctgtgataatcaaacatcaatgtttca 307 Query: 675 gctacacgcttaccctcatcgtagcagctcctgactccaat 715 || || ||||| |||||||| ||||| ||||| |||||||| Sbjct: 306 gcaactcgctttccctcatcatagcaactcctaactccaat 266 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 279 tcctttgcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 335 ||||| || ||||||||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 702 tccttcgcttttgtgatgtcaggcttcctctggcgaggatcatccggcgtgttctca 646 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 368 ctccttcacgttctcagcaagttccagcatggtgaattcacctgggttcccaatgttaat 427 ||||||||| ||||| ||||| || | ||| || ||||||||||| || |||||||| || Sbjct: 613 ctccttcacattctcggcaagctcgatcattgtaaattcacctggatttccaatgttgat 554 Query: 428 gggtccagtgttgtctcc 445 ||||||||||||||||| Sbjct: 553 cggtccagtgttgtctcc 536
>gb|AY088443.1| Arabidopsis thaliana clone 6701 mRNA, complete sequence Length = 1418 Score = 105 bits (53), Expect = 2e-19 Identities = 116/137 (84%) Strand = Plus / Minus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 608 |||||||||||||| || |||||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 811 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcattcgaggaccatatgtg 752 Query: 609 ttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcagt 668 ||||| || || ||||| ||||| |||||||| || || ||||||||||| ||||||| Sbjct: 751 ttgaagattctagcaatgcggatttcaatgccatgttgtctgtggtagtcaaacatcaag 692 Query: 669 gtctcagctacacgctt 685 || || ||||||||||| Sbjct: 691 gtttcggctacacgctt 675 Score = 44.1 bits (22), Expect = 0.63 Identities = 40/46 (86%) Strand = Plus / Minus Query: 379 tctcagcaagttccagcatggtgaattcacctgggttcccaatgtt 424 ||||||| ||||||| ||| ||||| ||||||||||| || ||||| Sbjct: 981 tctcagccagttccaccattgtgaactcacctgggttaccgatgtt 936
>ref|NM_125319.2| Arabidopsis thaliana UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE); catalytic AT5G59290 (UXS3) mRNA, complete cds Length = 1459 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 608 |||||||||||||| || |||||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 811 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcattcgaggaccatatgtg 752 Query: 609 ttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatca 666 ||||| || || ||||| ||||| |||||||| || || ||||||||||| ||||||| Sbjct: 751 ttgaagattctagcaatgcggatttcaatgccatgttgtctgtggtagtcaaacatca 694 Score = 44.1 bits (22), Expect = 0.63 Identities = 40/46 (86%) Strand = Plus / Minus Query: 379 tctcagcaagttccagcatggtgaattcacctgggttcccaatgtt 424 ||||||| ||||||| ||| ||||| ||||||||||| || ||||| Sbjct: 981 tctcagccagttccaccattgtgaactcacctgggttaccgatgtt 936
>gb|AY093958.1| Arabidopsis thaliana AT5g59290/mnc17_180 mRNA, complete cds Length = 1029 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 608 |||||||||||||| || |||||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 665 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcattcgaggaccatatgtg 606 Query: 609 ttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatca 666 ||||| || || ||||| ||||| |||||||| || || ||||||||||| ||||||| Sbjct: 605 ttgaagattctagcaatgcggatttcaatgccatgttgtctgtggtagtcaaacatca 548 Score = 44.1 bits (22), Expect = 0.63 Identities = 40/46 (86%) Strand = Plus / Minus Query: 379 tctcagcaagttccagcatggtgaattcacctgggttcccaatgtt 424 ||||||| ||||||| ||| ||||| ||||||||||| || ||||| Sbjct: 835 tctcagccagttccaccattgtgaactcacctgggttaccgatgtt 790
>gb|AF375442.1| Arabidopsis thaliana AT5g59290/mnc17_180 mRNA, complete cds Length = 1364 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 608 |||||||||||||| || |||||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 755 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcattcgaggaccatatgtg 696 Query: 609 ttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatca 666 ||||| || || ||||| ||||| |||||||| || || ||||||||||| ||||||| Sbjct: 695 ttgaagattctagcaatgcggatttcaatgccatgttgtctgtggtagtcaaacatca 638 Score = 44.1 bits (22), Expect = 0.63 Identities = 40/46 (86%) Strand = Plus / Minus Query: 379 tctcagcaagttccagcatggtgaattcacctgggttcccaatgtt 424 ||||||| ||||||| ||| ||||| ||||||||||| || ||||| Sbjct: 925 tctcagccagttccaccattgtgaactcacctgggttaccgatgtt 880
>emb|BX832416.1|CNS0A12Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH71ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1303 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 608 |||||||||||||| || |||||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 737 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcattcgaggaccatatgtg 678 Query: 609 ttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatca 666 ||||| || || ||||| ||||| |||||||| || || ||||||||||| ||||||| Sbjct: 677 ttgaagattctagcaatgcggatttcaatgccatgttgtctgtggtagtcaaacatca 620 Score = 44.1 bits (22), Expect = 0.63 Identities = 40/46 (86%) Strand = Plus / Minus Query: 379 tctcagcaagttccagcatggtgaattcacctgggttcccaatgtt 424 ||||||| ||||||| ||| ||||| ||||||||||| || ||||| Sbjct: 907 tctcagccagttccaccattgtgaactcacctgggttaccgatgtt 862
>gb|AF387789.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS3) mRNA, complete cds Length = 1029 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 608 |||||||||||||| || |||||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 665 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcattcgaggaccatatgtg 606 Query: 609 ttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatca 666 ||||| || || ||||| ||||| |||||||| || || ||||||||||| ||||||| Sbjct: 605 ttgaagattctagcaatgcggatttcaatgccatgttgtctgtggtagtcaaacatca 548 Score = 44.1 bits (22), Expect = 0.63 Identities = 40/46 (86%) Strand = Plus / Minus Query: 379 tctcagcaagttccagcatggtgaattcacctgggttcccaatgtt 424 ||||||| ||||||| ||| ||||| ||||||||||| || ||||| Sbjct: 835 tctcagccagttccaccattgtgaactcacctgggttaccgatgtt 790
>gb|AY619951.1| Nicotiana tabacum putative UDP-glucuronate decarboxylase 2 mRNA, complete cds Length = 1519 Score = 97.6 bits (49), Expect = 5e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 608 ||||| || ||||| || |||||||| |||||||| || ||||||| ||||||||| || Sbjct: 877 tgagctataaagttgctgacaacacgcccatcatcgatattcatccgaggtccatatgta 818 Query: 609 ttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcagt 668 ||||| || || ||||| || || ||||| || || || | ||||||||| ||||||| | Sbjct: 817 ttgaatattctagcaatccgaatttcaatcccatgttgtcggtggtagtcaaacatcaat 758 Query: 669 gtctcagctacacgcttaccctcatcgtagcagctcctgactccaattgggtt 721 ||||| || |||||||| |||||||| || ||||||| || ||||||||||| Sbjct: 757 gtctctgccacacgcttcccctcatcataacagctccgaaccccaattgggtt 705 Score = 44.1 bits (22), Expect = 0.63 Identities = 91/114 (79%) Strand = Plus / Minus Query: 395 catggtgaattcacctgggttcccaatgttaatgggtccagtgttgtctccattcatcag 454 |||||| ||||||||||| || |||||||| || || || ||||| || || | ||| || Sbjct: 1031 catggtaaattcacctggatttccaatgttgattggccctgtgttttccccttccattag 972 Query: 455 cttcataagaccattgaccatatcagcaacgtagcagaagctcctagtctgtgt 508 | ||||| ||||| |||||||||| ||| || ||||| || | ||||||||| Sbjct: 971 ccgaataagcccattaaccatatcagaaacataacagaaactgcgagtctgtgt 918
>ref|NM_128436.3| Arabidopsis thaliana NAD binding / catalytic AT2G28760 transcript variant AT2G28760.1 mRNA, complete cds Length = 1394 Score = 95.6 bits (48), Expect = 2e-16 Identities = 162/200 (81%) Strand = Plus / Minus Query: 504 tgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagtta 563 |||||||| || ||||| |||||||| ||||| || | | ||||||||||||||||| Sbjct: 797 tgtgttcccggtttctgaacagtcagagcttctcccctgagagcctgagcaatgaagttg 738 Query: 564 ctaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggca 623 || ||||| || ||||||||||||||||| | ||| ||||| |||||||| ||||| || Sbjct: 737 ctcacaacgcgaccatcatcaatgttcatacgaggaccatatgtgttgaatatcctcgct 678 Query: 624 atacggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgc 683 || || |||||||| || || ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 677 atgcgtatctcaatcccatgttgcctatggtaatcaaacataagagtctcggcaacacgt 618 Query: 684 ttaccctcatcgtagcagct 703 || || ||||| || ||||| Sbjct: 617 tttccttcatcataacagct 598
>ref|NM_201826.1| Arabidopsis thaliana NAD binding / catalytic AT2G28760 transcript variant AT2G28760.2 mRNA, complete cds Length = 1389 Score = 95.6 bits (48), Expect = 2e-16 Identities = 162/200 (81%) Strand = Plus / Minus Query: 504 tgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagtta 563 |||||||| || ||||| |||||||| ||||| || | | ||||||||||||||||| Sbjct: 792 tgtgttcccggtttctgaacagtcagagcttctcccctgagagcctgagcaatgaagttg 733 Query: 564 ctaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggca 623 || ||||| || ||||||||||||||||| | ||| ||||| |||||||| ||||| || Sbjct: 732 ctcacaacgcgaccatcatcaatgttcatacgaggaccatatgtgttgaatatcctcgct 673 Query: 624 atacggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgc 683 || || |||||||| || || ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 672 atgcgtatctcaatcccatgttgcctatggtaatcaaacataagagtctcggcaacacgt 613 Query: 684 ttaccctcatcgtagcagct 703 || || ||||| || ||||| Sbjct: 612 tttccttcatcataacagct 593
>emb|AJ275318.1|CAR275318 Cicer arietinum mRNA for dTDP-glucose 4-6-dehydratase Length = 1356 Score = 95.6 bits (48), Expect = 2e-16 Identities = 174/216 (80%) Strand = Plus / Minus Query: 486 tagcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcaccacgtatg 545 |||||||| || | ||| ||||||||||| |||||||||| || ||||||||| | Sbjct: 795 tagcagaaactgcgagtttgtgttcctggagattggacagtcaaggattcaccacgcagt 736 Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 || |||||||||||||| || |||||||| ||||||||||| ||||| | |||||||| Sbjct: 735 gcttgagcaatgaagttgctgacaacacgtccatcatcaatattcatgcgtggtccatat 676 Query: 606 gtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatc 665 ||||| || || || |||| ||| || || || ||||||||||| || || || |||||| Sbjct: 675 gtgttaaagattcttgcaacacgtatttctattccgtgctgcctatgataatcaaacatc 616 Query: 666 agtgtctcagctacacgcttaccctcatcgtagcag 701 | |||||||| ||||| || ||||| || |||||| Sbjct: 615 aaagtctcagccacacgtttcccctcgtcatagcag 580 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 368 ctccttcacgttctcagcaagttccagcatggtgaattcacctgggttcccaa 420 ||||||||| ||||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 913 ctccttcactgtctcagcaagttcaagcattgtgaattcacctgggtttccaa 861
>gb|AY128899.1| Arabidopsis thaliana putative nucleotide-sugar dehydratase (At2g28760) mRNA, complete cds Length = 1234 Score = 95.6 bits (48), Expect = 2e-16 Identities = 162/200 (81%) Strand = Plus / Minus Query: 504 tgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagtta 563 |||||||| || ||||| |||||||| ||||| || | | ||||||||||||||||| Sbjct: 713 tgtgttcccggtttctgaacagtcagagcttctcccctgagagcctgagcaatgaagttg 654 Query: 564 ctaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggca 623 || ||||| || ||||||||||||||||| | ||| ||||| |||||||| ||||| || Sbjct: 653 ctcacaacgcgaccatcatcaatgttcatacgaggaccatatgtgttgaatatcctcgct 594 Query: 624 atacggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgc 683 || || |||||||| || || ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 593 atgcgtatctcaatcccatgttgcctatggtaatcaaacataagagtctcggcaacacgt 534 Query: 684 ttaccctcatcgtagcagct 703 || || ||||| || ||||| Sbjct: 533 tttccttcatcataacagct 514
>gb|AY099703.1| Arabidopsis thaliana putative nucleotide-sugar dehydratase (At2g28760) mRNA, complete cds Length = 1393 Score = 95.6 bits (48), Expect = 2e-16 Identities = 162/200 (81%) Strand = Plus / Minus Query: 504 tgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagtta 563 |||||||| || ||||| |||||||| ||||| || | | ||||||||||||||||| Sbjct: 797 tgtgttcccggtttctgaacagtcagagcttctcccctgagagcctgagcaatgaagttg 738 Query: 564 ctaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggca 623 || ||||| || ||||||||||||||||| | ||| ||||| |||||||| ||||| || Sbjct: 737 ctcacaacgcgaccatcatcaatgttcatacgaggaccatatgtgttgaatatcctcgct 678 Query: 624 atacggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgc 683 || || |||||||| || || ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 677 atgcgtatctcaatcccatgttgcctatggtaatcaaacataagagtctcggcaacacgt 618 Query: 684 ttaccctcatcgtagcagct 703 || || ||||| || ||||| Sbjct: 617 tttccttcatcataacagct 598
>emb|BX823718.1|CNS0A7QP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1114 Score = 91.7 bits (46), Expect = 3e-15 Identities = 251/318 (78%), Gaps = 1/318 (0%) Strand = Plus / Minus Query: 405 tcacctgggttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataaga 464 ||||||||||| || ||||| ||||| ||||||| ||||| | ||| || |||||| Sbjct: 756 tcacctgggttaccgatgttgatgggaccagtgtcatctccttccatgaggcgcataagt 697 Query: 465 ccattgaccatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggaca 524 |||| ||||| |||| || || ||||| || | ||||||||| ||||| ||||| ||| Sbjct: 696 ccatcaaccatgtcagatacataacagaaactgcgagtctgtgtccctggtttctgaaca 637 Query: 525 gtcagggcttcaccacgtatggcctgagcaatgaagttactaacaacacggccatcatca 584 |||| || ||||| | | || || ||||||||||| || |||||| |||||||||| Sbjct: 636 gtcaatgcctcacccccgagtgcttgtgcaatgaagttgcttacaacaaggccatcatct 577 Query: 585 atgt-tcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtg 643 || | |||| || || ||||| |||||||| || || |||| || |||||||| || | Sbjct: 576 atttctcatgcttggaccataagtgttgaagattctatcaatgcgcatctcaatcccatt 517 Query: 644 ctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagct 703 |||||||| || || ||||||| ||||||||| |||||||| || ||||| || ||||| Sbjct: 516 ttgcctgtgttattcaaacatcaatgtctcagcaacacgcttgccttcatcataacagct 457 Query: 704 cctgactccaattgggtt 721 ||| || ||||||||||| Sbjct: 456 cctaacaccaattgggtt 439 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 335 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 876 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 826
>emb|BX818916.1|CNS0A9UJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZG06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1314 Score = 87.7 bits (44), Expect = 5e-14 Identities = 161/200 (80%) Strand = Plus / Minus Query: 504 tgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagtta 563 |||||||| || ||||| |||||||| ||||| || | | |||||||||||||||| Sbjct: 776 tgtgttcccggtttctgaacagtcagagcttctcccctgagagcctgagcaatgaagtgg 717 Query: 564 ctaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggca 623 || ||||| || ||||||||||||||||| | ||| ||||| |||||||| ||||| || Sbjct: 716 ctcacaacgcgaccatcatcaatgttcatacgaggaccatatgtgttgaatatcctcgct 657 Query: 624 atacggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgc 683 || || |||||||| || || ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 656 atgcgtatctcaatcccatgttgcctatggtaatcaaacataagagtctcggcaacacgt 597 Query: 684 ttaccctcatcgtagcagct 703 || || ||||| || ||||| Sbjct: 596 tttccttcatcataacagct 577
>gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map mi54, complete sequence Length = 107097 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 ||||||||||||||||| || ||||| || ||||||||||||||||| | ||| ||||| Sbjct: 8484 gcctgagcaatgaagttgctcacaacgcgaccatcatcaatgttcatacgaggaccatat 8543 Query: 606 gtgttgaaaatcct 619 |||||||| ||||| Sbjct: 8544 gtgttgaatatcct 8557
>dbj|AB059568.1| Pisum sativum uxs1 mRNA for UDP-D-glucuronate carboxy-lyase, complete cds Length = 1406 Score = 73.8 bits (37), Expect = 7e-10 Identities = 139/173 (80%) Strand = Plus / Minus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 608 |||||||||||||| || |||||||| |||||||| || ||||| | || ||||| ||| Sbjct: 792 tgagcaatgaagttgctgacaacacgtccatcatcgatattcatgcgcggcccatatgtg 733 Query: 609 ttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcagt 668 ||||| || || |||| ||| || || || || ||||| || || || || ||||||| Sbjct: 732 ttgaagattcttgcaacacgtatttctattccatgctgtctatgataatcaaacatcaaa 673 Query: 669 gtctcagctacacgcttaccctcatcgtagcagctcctgactccaattgggtt 721 |||||||| ||||| || |||||||| |||||||| | |||||||| ||||| Sbjct: 672 gtctcagcgacacgtttcccctcatcatagcagctacgaactccaatagggtt 620 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 368 ctccttcacgttctcagcaagttccagcatggtgaattcacctgggttcccaa 420 ||||||||| ||||||||||||| ||||| ||||||||||| ||||| |||| Sbjct: 973 ctccttcactgtctcagcaagttcaagcatagtgaattcacccgggtttccaa 921
>gb|AY922314.1| Populus tomentosa UDP-glucuronic acid decarboxylase 2 (UXS2) mRNA, complete cds Length = 1466 Score = 71.9 bits (36), Expect = 3e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 |||||||||| || ||||||||||||||||||||||| ||| ||| | ||||||||| Sbjct: 1038 gcctgagcaacaaaattactaacaacacggccatcatctatgcacattcgaggtccataa 979 Query: 606 gtgttgaaaatcctggcaat 625 || |||||||| |||||||| Sbjct: 978 gtattgaaaattctggcaat 959 Score = 44.1 bits (22), Expect = 0.63 Identities = 28/30 (93%) Strand = Plus / Minus Query: 383 agcaagttccagcatggtgaattcacctgg 412 |||||| || |||||||||||||||||||| Sbjct: 1201 agcaagctcgagcatggtgaattcacctgg 1172
>gb|AY619952.1| Nicotiana tabacum putative UDP-glucuronate decarboxylase 3 mRNA, complete cds Length = 1756 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Minus Query: 545 ggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccata 604 ||||||||||| ||||| ||||||||||| |||||||| ||| ||| | ||||||||| Sbjct: 1097 ggcctgagcaacaaagttgctaacaacacgaccatcatcgatgcacatacgaggtccata 1038 Query: 605 ggtgttgaaaatcct 619 ||||||||| ||||| Sbjct: 1037 ggtgttgaagatcct 1023
>dbj|AB016890.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC17 Length = 75803 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/83 (85%) Strand = Plus / Plus Query: 549 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 608 |||||||||||||| || |||||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 55725 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcattcgaggaccatatgtg 55784 Query: 609 ttgaaaatcctggcaatacggat 631 ||||| || || ||||| ||||| Sbjct: 55785 ttgaagattctagcaatgcggat 55807
>ref|NM_116148.1| Arabidopsis thaliana UXS2 (UDP-GLUCURONIC ACID DECARBOXYLASE 2); catalytic/ dTDP-glucose 4,6-dehydratase AT3G62830 (UXS2) mRNA, complete cds Length = 1338 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 ||||| |||| |||||||||||||||||| |||||||| || ||| || || |||||| Sbjct: 932 gcctgtgcaacgaagttactaacaacacgcccatcatctatacacattcttggaccatag 873 Query: 606 gtgttgaaaatcctggcaat 625 |||||||| ||||| ||||| Sbjct: 872 gtgttgaagatcctagcaat 853 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtc 319 |||||||||||||||||||| |||| | ||||||| Sbjct: 1193 gcctttgtgatgtcaggctttctcttgtgagggtc 1159
>gb|AY143897.1| Arabidopsis thaliana At3g62830/F26K9_260 mRNA, complete cds Length = 1338 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 ||||| |||| |||||||||||||||||| |||||||| || ||| || || |||||| Sbjct: 932 gcctgtgcaacgaagttactaacaacacgcccatcatctatacacattcttggaccatag 873 Query: 606 gtgttgaaaatcctggcaat 625 |||||||| ||||| ||||| Sbjct: 872 gtgttgaagatcctagcaat 853 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtc 319 |||||||||||||||||||| |||| | ||||||| Sbjct: 1193 gcctttgtgatgtcaggctttctcttgtgagggtc 1159
>emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome 3, BAC clone F18L15 Length = 100328 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 552 gcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttg 611 ||||||||||| || ||||||||||||||||| |||||||| | || ||||| |||||| Sbjct: 76086 gcaatgaagttgcttacaacacggccatcatcgatgttcatgcgtggaccataagtgttg 76145 Query: 612 aaaatcctggcaatacggat 631 || || || ||||| ||||| Sbjct: 76146 aagattctagcaatgcggat 76165 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 645 tgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagctc 704 |||||||||||||| ||||||| |||||||| |||||||| || ||||| || |||||| Sbjct: 76287 tgcctgtggtagtcaaacatcaaggtctcagcaacacgcttgccttcatcataacagctc 76346 Query: 705 ct 706 || Sbjct: 76347 ct 76348 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Plus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 335 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 75554 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 75604
>gb|AF361617.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRNA, complete cds Length = 1663 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 ||||| |||| |||||||||||||||||| |||||||| || ||| || || |||||| Sbjct: 1085 gcctgtgcaacgaagttactaacaacacgcccatcatctatacacattcttggaccatag 1026 Query: 606 gtgttgaaaatcctggcaat 625 |||||||| ||||| ||||| Sbjct: 1025 gtgttgaagatcctagcaat 1006 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtc 319 |||||||||||||||||||| |||| | ||||||| Sbjct: 1346 gcctttgtgatgtcaggctttctcttgtgagggtc 1312
>gb|AY050389.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRNA, complete cds Length = 1701 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 ||||| |||| |||||||||||||||||| |||||||| || ||| || || |||||| Sbjct: 1085 gcctgtgcaacgaagttactaacaacacgcccatcatctatacacattcttggaccatag 1026 Query: 606 gtgttgaaaatcctggcaat 625 |||||||| ||||| ||||| Sbjct: 1025 gtgttgaagatcctagcaat 1006 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtc 319 |||||||||||||||||||| |||| | ||||||| Sbjct: 1346 gcctttgtgatgtcaggctttctcttgtgagggtc 1312
>emb|BX825822.1|CNS0A4P6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL65ZB07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 923 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 ||||| |||| |||||||||||||||||| |||||||| || ||| || || |||||| Sbjct: 303 gcctgtgcaacgaagttactaacaacacgcccatcatctatacacattcttggaccatag 244 Query: 606 gtgttgaaaatcctggcaat 625 |||||||| ||||| ||||| Sbjct: 243 gtgttgaagatcctagcaat 224 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtc 319 |||||||||||||||||||| |||| | ||||||| Sbjct: 564 gcctttgtgatgtcaggctttctcttgtgagggtc 530
>gb|AF387788.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS2) mRNA, complete cds Length = 1338 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 ||||| |||| |||||||||||||||||| |||||||| || ||| || || |||||| Sbjct: 932 gcctgtgcaacgaagttactaacaacacgcccatcatctatacacattcttggaccatag 873 Query: 606 gtgttgaaaatcctggcaat 625 |||||||| ||||| ||||| Sbjct: 872 gtgttgaagatcctagcaat 853 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtc 319 |||||||||||||||||||| |||| | ||||||| Sbjct: 1193 gcctttgtgatgtcaggctttctcttgtgagggtc 1159
>emb|Z49239.1|ATD18MR A.thaliana mRNA for putative dTDP-glucose 4-6-dehydratases Length = 1660 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 ||||| |||| |||||||||||||||||| |||||||| || ||| || || |||||| Sbjct: 1071 gcctgtgcaacgaagttactaacaacacgcccatcatctatacacattcttggaccatag 1012 Query: 606 gtgttgaaaatcctggcaat 625 |||||||| ||||| ||||| Sbjct: 1011 gtgttgaagatcctagcaat 992 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtc 319 |||||||||||||||||||| |||| | ||||||| Sbjct: 1332 gcctttgtgatgtcaggctttctcttgtgagggtc 1298
>gb|AY106346.1| Zea mays PCO069392 mRNA sequence Length = 1708 Score = 63.9 bits (32), Expect = 7e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 |||||||||| ||||||||| |||||||||||||| |||||| ||| | ||| ||||| Sbjct: 1005 gcctgagcaacgaagttactgacaacacggccatcgtcaatgcacatgcgagggccatat 946 Query: 606 gtgttgaa 613 |||||||| Sbjct: 945 gtgttgaa 938 Score = 44.1 bits (22), Expect = 0.63 Identities = 28/30 (93%) Strand = Plus / Minus Query: 680 acgcttaccctcatcgtagcagctcctgac 709 |||||| ||||||||||| ||||||||||| Sbjct: 871 acgcttgccctcatcgtaacagctcctgac 842
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9 Length = 110257 Score = 61.9 bits (31), Expect = 3e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 547 cctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatagg 606 |||| |||| |||||||||||||||||| |||||||| || ||| || || ||||||| Sbjct: 87133 cctgtgcaacgaagttactaacaacacgcccatcatctatacacattcttggaccatagg 87074 Query: 607 tgttgaaaatcctggcaat 625 ||||||| ||||| ||||| Sbjct: 87073 tgttgaagatcctagcaat 87055 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtc 319 |||||||||||||||||||| |||| | ||||||| Sbjct: 88182 gcctttgtgatgtcaggctttctcttgtgagggtc 88148
>dbj|AK061857.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G06, full insert sequence Length = 1057 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 |||||||||| ||||| || ||||||||||||||||||||| ||| | ||| ||||| Sbjct: 339 gcctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatat 280 Query: 606 gtgttgaaaatcc 618 ||||| ||||||| Sbjct: 279 gtgttaaaaatcc 267
>gb|AF251077.1|AF251077 Oryza sativa dTDP-glucose 4-6-dehydratase-like protein mRNA, partial cds Length = 773 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 |||||||||| ||||| || ||||||||||||||||||||| ||| | ||| ||||| Sbjct: 334 gcctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatat 275 Query: 606 gtgttgaaaatcc 618 ||||| ||||||| Sbjct: 274 gtgttaaaaatcc 262
>dbj|AB167396.1| Oryza sativa (japonica cultivar-group) UXS-2 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1336 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 |||||||||| ||||| || ||||||||||||||||||||| ||| | ||| ||||| Sbjct: 937 gcctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatat 878 Query: 606 gtgttgaaaatcc 618 ||||| ||||||| Sbjct: 877 gtgttaaaaatcc 865
>dbj|AK101168.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028I19, full insert sequence Length = 1820 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 |||||||||| ||||| || ||||||||||||||||||||| ||| | ||| ||||| Sbjct: 1064 gcctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatat 1005 Query: 606 gtgttgaaaatcc 618 ||||| ||||||| Sbjct: 1004 gtgttaaaaatcc 992
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 547 cctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatagg 606 ||||||||| ||||| || ||||||||||||||||||||| ||| | ||| ||||| | Sbjct: 11891009 cctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatg 11891068 Query: 607 tgttgaaaatcc 618 |||| ||||||| Sbjct: 11891069 tgttaaaaatcc 11891080 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Minus Query: 384 gcaagttccagcatggtgaattcacctgggtt 415 |||||||||| |||||||||||| |||||||| Sbjct: 35893238 gcaagttccaacatggtgaattctcctgggtt 35893207
>dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1012D10 Length = 168267 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 547 cctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatagg 606 ||||||||| ||||| || ||||||||||||||||||||| ||| | ||| ||||| | Sbjct: 103294 cctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatg 103353 Query: 607 tgttgaaaatcc 618 |||| ||||||| Sbjct: 103354 tgttaaaaatcc 103365
>gb|AY105704.1| Zea mays PCO089743 mRNA sequence Length = 888 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 |||||||||| ||| ||||| ||||||||||| ||||||||| ||| | ||| ||||| Sbjct: 225 gcctgagcaacgaaattactgacaacacggccgtcatcaatgcacatgcgaggaccatat 166 Query: 606 gtgttgaaaatcctggcaat 625 ||||| || |||| |||||| Sbjct: 165 gtgttaaagatccgggcaat 146
>ref|NM_115212.2| Arabidopsis thaliana UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1); catalytic AT3G53520 (UXS1) transcript variant AT3G53520.2 mRNA, complete cds Length = 1531 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaat 616 ||||||||||||||||| |||||||||| | ||| || || ||||| ||||||||||| Sbjct: 896 aagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaat 838
>ref|NM_180363.1| Arabidopsis thaliana UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1); catalytic AT3G53520 (UXS1) transcript variant AT3G53520.1 mRNA, complete cds Length = 1529 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaat 616 ||||||||||||||||| |||||||||| | ||| || || ||||| ||||||||||| Sbjct: 896 aagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaat 838
>gb|AY065075.1| Arabidopsis thaliana dTDP-glucose 4-6-dehydratase-like protein (F4P12.220) mRNA, complete cds Length = 1666 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaat 616 ||||||||||||||||| |||||||||| | ||| || || ||||| ||||||||||| Sbjct: 1030 aagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaat 972
>emb|BX823214.1|CNS0A7KG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS11ZE03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1608 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaat 616 ||||||||||||||||| |||||||||| | ||| || || ||||| ||||||||||| Sbjct: 1020 aagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaat 962
>emb|BX823176.1|CNS0A7M4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB95ZE05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1648 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaat 616 ||||||||||||||||| |||||||||| | ||| || || ||||| ||||||||||| Sbjct: 1074 aagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaat 1016
>emb|BX822635.1|CNS0A7MG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZH12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1604 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaat 616 ||||||||||||||||| |||||||||| | ||| || || ||||| ||||||||||| Sbjct: 1017 aagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaat 959
>gb|BT003355.1| Arabidopsis thaliana dTDP-glucose 4-6-dehydratase-like protein (At3g53520) mRNA, complete cds Length = 1492 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaat 616 ||||||||||||||||| |||||||||| | ||| || || ||||| ||||||||||| Sbjct: 923 aagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaat 865
>gb|AF387787.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS1) mRNA, complete cds Length = 1302 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaat 616 ||||||||||||||||| |||||||||| | ||| || || ||||| ||||||||||| Sbjct: 923 aagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaat 865
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12 Length = 144628 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaat 616 ||||||||||||||||| |||||||||| | ||| || || ||||| ||||||||||| Sbjct: 83848 aagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaat 83790
>gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH015H17, complete sequence Length = 110885 Score = 54.0 bits (27), Expect = 7e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 547 cctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatagg 606 |||| |||| |||||| || |||||||| ||||||||||| ||| || || ||||||| Sbjct: 18942 cctgcgcaacgaagttgctgacaacacgtccatcatcaatacacattcttggaccatagg 18883 Query: 607 tgttgaaaatcctggcaat 625 ||||||| ||||| ||||| Sbjct: 18882 tgttgaagatcctagcaat 18864 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtcatc 322 |||||||| ||||||||||| |||| | |||||||||| Sbjct: 19871 gcctttgtaatgtcaggctttctcttgtgagggtcatc 19834
>gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH001H24, complete sequence Length = 118144 Score = 54.0 bits (27), Expect = 7e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 547 cctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatagg 606 |||| |||| |||||| || |||||||| ||||||||||| ||| || || ||||||| Sbjct: 105120 cctgcgcaacgaagttgctgacaacacgtccatcatcaatacacattcttggaccatagg 105061 Query: 607 tgttgaaaatcctggcaat 625 ||||||| ||||| ||||| Sbjct: 105060 tgttgaagatcctagcaat 105042 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtcatc 322 |||||||| ||||||||||| |||| | |||||||||| Sbjct: 106049 gcctttgtaatgtcaggctttctcttgtgagggtcatc 106012
>gb|AC152937.21| Medicago truncatula clone mth2-96n6, complete sequence Length = 108802 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 547 cctgagcaatgaagttactaacaacacggccatcatc 583 ||||||||| |||||||||||| ||||| |||||||| Sbjct: 42476 cctgagcaacgaagttactaacgacacgtccatcatc 42512 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Plus Query: 384 gcaagttccagcatggtgaattcacc 409 ||||||||||||||||| |||||||| Sbjct: 40939 gcaagttccagcatggtaaattcacc 40964 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 680 acgcttaccctcatcgtagcagct 703 |||||| ||||||||||||||||| Sbjct: 42705 acgctttccctcatcgtagcagct 42728
>ref|XM_785356.1| PREDICTED: Strongylocentrotus purpuratus similar to UDP-glucuronate decarboxylase 1 (LOC585531), mRNA Length = 1169 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 596 aggtccataggtgttgaaaatcctggcaa 624 ||||||| ||||||||||||||||||||| Sbjct: 141 aggtccaaaggtgttgaaaatcctggcaa 113
>ref|NM_190499.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1173 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Minus Query: 384 gcaagttccagcatggtgaattcacctgggtt 415 |||||||||| |||||||||||| |||||||| Sbjct: 980 gcaagttccaacatggtgaattctcctgggtt 949
>ref|XM_753883.1| Ustilago maydis 521 hypothetical protein (UM02829.1) partial mRNA Length = 1806 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Minus Query: 669 gtctcagctacacgcttaccctcatcgtagca 700 ||||||||||| ||||||||||| |||||||| Sbjct: 1028 gtctcagctacgcgcttaccctcgtcgtagca 997
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506B12 Length = 170759 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Minus Query: 384 gcaagttccagcatggtgaattcacctgggtt 415 |||||||||| |||||||||||| |||||||| Sbjct: 157696 gcaagttccaacatggtgaattctcctgggtt 157665
>dbj|AB182636.1| Oryza sativa (japonica cultivar-group) UXS-5 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1555 Score = 48.1 bits (24), Expect = 0.041 Identities = 57/68 (83%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 |||||||||| ||||| || ||||||||||||||||| ||| ||| | ||| ||||| Sbjct: 1033 gcctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatat 974 Query: 606 gtgttgaa 613 |||||||| Sbjct: 973 gtgttgaa 966
>dbj|AB079063.2| Oryza sativa (japonica cultivar-group) UXS-4 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1404 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Minus Query: 384 gcaagttccagcatggtgaattcacctgggtt 415 |||||||||| |||||||||||| |||||||| Sbjct: 1040 gcaagttccaacatggtgaattctcctgggtt 1009
>dbj|AK122156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145O13, full insert sequence Length = 1734 Score = 48.1 bits (24), Expect = 0.041 Identities = 57/68 (83%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 605 |||||||||| ||||| || ||||||||||||||||| ||| ||| | ||| ||||| Sbjct: 1107 gcctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatat 1048 Query: 606 gtgttgaa 613 |||||||| Sbjct: 1047 gtgttgaa 1040
>dbj|AK104675.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-H12, full insert sequence Length = 805 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Minus Query: 384 gcaagttccagcatggtgaattcacctgggtt 415 |||||||||| |||||||||||| |||||||| Sbjct: 281 gcaagttccaacatggtgaattctcctgggtt 250
>dbj|AK069181.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008F13, full insert sequence Length = 2387 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Minus Query: 384 gcaagttccagcatggtgaattcacctgggtt 415 |||||||||| |||||||||||| |||||||| Sbjct: 1858 gcaagttccaacatggtgaattctcctgggtt 1827
>ref|NM_116149.2| Arabidopsis thaliana unknown protein AT3G62840 mRNA, complete cds Length = 1063 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Plus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtc 319 |||||||||||||||||||| |||| | ||||||| Sbjct: 966 gcctttgtgatgtcaggctttctcttgtgagggtc 1000
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 547 cctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatagg 606 ||||||||| ||||| || ||||||||||||||||| ||| ||| | ||| ||||| | Sbjct: 144435 cctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatg 144494 Query: 607 tgttgaa 613 ||||||| Sbjct: 144495 tgttgaa 144501
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 547 cctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatagg 606 ||||||||| ||||| || ||||||||||||||||| ||| ||| | ||| ||||| | Sbjct: 17200300 cctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatg 17200359 Query: 607 tgttgaa 613 ||||||| Sbjct: 17200360 tgttgaa 17200366
>emb|BX822583.1|CNS0A63N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB50ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 451 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttcctctggcgagggtc 319 |||||||||||||||||||| |||| | ||||||| Sbjct: 92 gcctttgtgatgtcaggctttctcttgtgagggtc 58
>ref|NM_130333.1| Arabidopsis thaliana UXS4 (UDP-XYLOSE SYNTHASE 4); catalytic AT2G47650 (UXS4) mRNA, complete cds Length = 1529 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 393 agcatggtgaattcacctgggttcccaatgttaa 426 ||||||||||||||||| ||||| |||| ||||| Sbjct: 1184 agcatggtgaattcaccggggttaccaaggttaa 1151
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 399 gtgaattcacctgggttcccaatgttaatgggtccagt 436 |||||||||| ||||| || ||||||||||||||||| Sbjct: 325162 gtgaattcactggggttgccgatgttaatgggtccagt 325125
>gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 map CIC06C03, complete sequence Length = 106355 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Plus Query: 393 agcatggtgaattcacctgggttcccaatgttaa 426 ||||||||||||||||| ||||| |||| ||||| Sbjct: 6513 agcatggtgaattcaccggggttaccaaggttaa 6546
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete sequence Length = 98937 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 393 agcatggtgaattcacctgggttcccaatgttaa 426 ||||||||||||||||| ||||| |||| ||||| Sbjct: 9563 agcatggtgaattcaccggggttaccaaggttaa 9530
>gb|AY677178.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS2) mRNA, complete cds Length = 1380 Score = 44.1 bits (22), Expect = 0.63 Identities = 37/42 (88%) Strand = Plus / Minus Query: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatg 587 |||||||||| ||||| || |||||||||||||| |||||| Sbjct: 815 gcctgagcaacaaagttgctgacaacacggccatcgtcaatg 774 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 387 agttccagcatggtgaattcacctgggtt 415 ||||||||||||||||| ||||| ||||| Sbjct: 974 agttccagcatggtgaactcaccggggtt 946
>gb|BT022016.1| Arabidopsis thaliana At2g47650 gene, complete cds Length = 1480 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 393 agcatggtgaattcacctgggttcccaatgttaa 426 ||||||||||||||||| ||||| |||| ||||| Sbjct: 1103 agcatggtgaattcaccggggttaccaaggttaa 1070
>ref|XM_476928.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1393 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 575 gccatcatcaatgttcatcctaggt 599 |||||||||| |||||||||||||| Sbjct: 424 gccatcatcagtgttcatcctaggt 400
>gb|AC149635.1| Genomic sequence for broccoli [Brassica oleracea L. (Italica group)] BAC clone B19N3, complete sequence Length = 96718 Score = 42.1 bits (21), Expect = 2.5 Identities = 51/61 (83%) Strand = Plus / Minus Query: 558 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatc 617 ||||| ||||||||||| || |||||||| |||||| || ||||| |||||||| ||| Sbjct: 82081 aagttgctaacaacacgaccgtcatcaatacacatccttggcccataagtgttgaagatc 82022 Query: 618 c 618 | Sbjct: 82021 c 82021
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 669 gtctcagctacacgcttaccctcatcgta 697 |||||||| |||||||| ||||||||||| Sbjct: 725557 gtctcagcgacacgcttgccctcatcgta 725529
>gb|AY023547.1| Oryza sativa microsatellite MRG5872 containing (TGG)X8, closest to marker RZ272, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 575 gccatcatcaatgttcatcctaggt 599 |||||||||| |||||||||||||| Sbjct: 92 gccatcatcagtgttcatcctaggt 68
>gb|AC122912.2| Mus musculus BAC clone RP23-61E5 from 7, complete sequence Length = 255062 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 gcctttgtgatgtcaggcttc 305 ||||||||||||||||||||| Sbjct: 163613 gcctttgtgatgtcaggcttc 163593
>gb|AY094581.1| Cryptococcus neoformans var. neoformans UDP-xylose synthase (UXS1) gene, complete cds Length = 3100 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 669 gtctcagctacacgcttaccctcatcgta 697 |||||||| |||||||| ||||||||||| Sbjct: 2071 gtctcagcgacacgcttgccctcatcgta 2043
>gb|AF385328.1|AF385328 Filobasidiella neoformans UDP-glucuronic acid decarboxylase Uxs1p (UXS1) mRNA, complete cds Length = 1233 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 669 gtctcagctacacgcttaccctcatcgta 697 |||||||| |||||||| ||||||||||| Sbjct: 716 gtctcagcgacacgcttgccctcatcgta 688
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 575 gccatcatcaatgttcatcctaggt 599 |||||||||| |||||||||||||| Sbjct: 4692642 gccatcatcagtgttcatcctaggt 4692666
>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0084L07 Length = 127992 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 575 gccatcatcaatgttcatcctaggt 599 |||||||||| |||||||||||||| Sbjct: 10552 gccatcatcagtgttcatcctaggt 10576
>dbj|AK103069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117P16, full insert sequence Length = 1393 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 575 gccatcatcaatgttcatcctaggt 599 |||||||||| |||||||||||||| Sbjct: 424 gccatcatcagtgttcatcctaggt 400
>ref|XM_572003.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 1397 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 669 gtctcagctacacgcttaccctcatcgta 697 |||||||| |||||||| ||||||||||| Sbjct: 757 gtctcagcgacacgcttgccctcatcgta 729
>dbj|AP004384.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506C07 Length = 123451 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 575 gccatcatcaatgttcatcctaggt 599 |||||||||| |||||||||||||| Sbjct: 100015 gccatcatcagtgttcatcctaggt 100039
>gb|U23514.3| Caenorhabditis elegans cosmid F48E8, complete sequence Length = 35325 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 aaagtttctaataatacaat 32 |||||||||||||||||||| Sbjct: 20319 aaagtttctaataatacaat 20300
>gb|AC125125.4| Mus musculus BAC clone RP24-274E6 from chromosome 8, complete sequence Length = 180801 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gatcaactccttcacgttct 381 |||||||||||||||||||| Sbjct: 157934 gatcaactccttcacgttct 157915
>emb|AL592430.8| Human DNA sequence from clone RP11-388P9 on chromosome 10 Contains part of the ANK3 gene for ankyrin 3, node of Ranvier (ankyrin G) and a novel gene, complete sequence Length = 145136 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 aaagtttctaataatacaat 32 |||||||||||||||||||| Sbjct: 103537 aaagtttctaataatacaat 103518
>emb|AL356308.16| Human DNA sequence from clone RP11-475L16 on chromosome 10 Contains the 5' end of the gene for VPS10 domain receptor protein SORCS 1 and a CpG island, complete sequence Length = 102910 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 tctaataatacaatctttaa 38 |||||||||||||||||||| Sbjct: 76133 tctaataatacaatctttaa 76114
>emb|AL136135.19| Human DNA sequence from clone RP11-301C18 on chromosome 6 Contains the 5'end of a gene for a novel protein (2410004N11RIK), the gene for a novel protein, the 5' end of a gene for a novel protein and a CpG island, complete sequence Length = 46699 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 tggcttctggacagtcagggcttc 535 ||||||||||| |||||||||||| Sbjct: 13241 tggcttctggagagtcagggcttc 13218
>emb|BX908396.13| Zebrafish DNA sequence from clone CH211-267G5 in linkage group 18, complete sequence Length = 149493 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 taaagtttctaataatacaa 31 |||||||||||||||||||| Sbjct: 107638 taaagtttctaataatacaa 107657
>gb|AC105282.5| Homo sapiens chromosome 18, clone RP11-452F20, complete sequence Length = 167258 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 agcttcataagaccattgac 472 |||||||||||||||||||| Sbjct: 166392 agcttcataagaccattgac 166411
>gb|AC110615.3| Homo sapiens BAC clone RP11-556N4 from 4, complete sequence Length = 195101 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 tatataaagtttctaataat 27 |||||||||||||||||||| Sbjct: 13115 tatataaagtttctaataat 13096
>gb|AC091643.6| Homo sapiens chromosome 18, clone RP11-727B4, complete sequence Length = 169944 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 agcttcataagaccattgac 472 |||||||||||||||||||| Sbjct: 68254 agcttcataagaccattgac 68273
>gb|AC159135.11| Mus musculus 10 BAC RP23-184H24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207228 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gacaaaggtgtaattggttt 64 |||||||||||||||||||| Sbjct: 337 gacaaaggtgtaattggttt 318
>gb|AC099760.5| Mus musculus BAC clone RP23-122E16 from chromosome 8, complete sequence Length = 193884 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ttggccttcttgggcactgc 202 |||||||||||||||||||| Sbjct: 153079 ttggccttcttgggcactgc 153098
>gb|AC159335.10| Mus musculus 10 BAC RP24-447O4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 135177 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gacaaaggtgtaattggttt 64 |||||||||||||||||||| Sbjct: 76946 gacaaaggtgtaattggttt 76927
>gb|AC079176.15| Homo sapiens X BAC RP11-325D5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186278 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 ggacagtcagggcttcacca 539 |||||||||||||||||||| Sbjct: 163567 ggacagtcagggcttcacca 163548
>dbj|AB167397.1| Oryza sativa (japonica cultivar-group) UXS-1 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1303 Score = 40.1 bits (20), Expect = 9.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 548 ctgagcaatgaagttactaacaacacggccatcatc 583 |||||| | |||||| ||||||||||| |||||||| Sbjct: 883 ctgagcgacgaagttgctaacaacacgcccatcatc 848
>dbj|AK071034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075I12, full insert sequence Length = 1604 Score = 40.1 bits (20), Expect = 9.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 548 ctgagcaatgaagttactaacaacacggccatcatc 583 |||||| | |||||| ||||||||||| |||||||| Sbjct: 978 ctgagcgacgaagttgctaacaacacgcccatcatc 943
>emb|CT025908.12| Zebrafish DNA sequence from clone CH211-163B1 in linkage group 18, complete sequence Length = 176163 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 taaagtttctaataatacaa 31 |||||||||||||||||||| Sbjct: 165685 taaagtttctaataatacaa 165666
>gb|AY108129.1| Zea mays PCO069672 mRNA sequence Length = 984 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ttgggctcccagtcaagaac 277 |||||||||||||||||||| Sbjct: 623 ttgggctcccagtcaagaac 604
>emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on chromosome 17, complete sequence Length = 231197 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 tatgagtatgctctggcaaa 142 |||||||||||||||||||| Sbjct: 208325 tatgagtatgctctggcaaa 208306
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 agttccagcatggtgaattc 406 |||||||||||||||||||| Sbjct: 372396 agttccagcatggtgaattc 372377
>emb|AL929024.9| Mouse DNA sequence from clone RP23-480H10 on chromosome 2, complete sequence Length = 159617 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ttggccttcttgggcactgc 202 |||||||||||||||||||| Sbjct: 53068 ttggccttcttgggcactgc 53049
>gb|M15265.1|CUCPHT Cucurbita pepo (zucchini) phytochrome mRNA, complete cds Length = 3574 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 gtctccattcatcagcttca 459 |||||||||||||||||||| Sbjct: 3434 gtctccattcatcagcttca 3415 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,532,133 Number of Sequences: 3902068 Number of extensions: 5532133 Number of successful extensions: 116161 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115656 Number of HSP's gapped (non-prelim): 487 length of query: 721 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 698 effective length of database: 17,143,297,704 effective search space: 11966021797392 effective search space used: 11966021797392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)