| Clone Name | rbags4l15 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CALX_SOYBN (Q39817) Calnexin homolog precursor | 92 | 9e-19 | 2 | CALX_PEA (O82709) Calnexin homolog precursor | 85 | 2e-16 | 3 | CALX2_ARATH (Q38798) Calnexin homolog 2 precursor | 84 | 2e-16 | 4 | CALX_HELTU (Q39994) Calnexin homolog precursor | 79 | 8e-15 | 5 | CALX1_ARATH (P29402) Calnexin homolog 1 precursor | 73 | 5e-13 | 6 | SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precurs... | 32 | 1.8 | 7 | KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-ass... | 31 | 3.1 | 8 | ZNF77_HUMAN (Q15935) Zinc finger protein 77 (ZNFpT1) | 30 | 4.0 |
|---|
>CALX_SOYBN (Q39817) Calnexin homolog precursor| Length = 546 Score = 92.4 bits (228), Expect = 9e-19 Identities = 44/76 (57%), Positives = 54/76 (71%) Frame = -3 Query: 585 KXXXXXXXESEDLSEFQKKIFSVLYKIADIPFLEPYKIKIIDLIEKGEKQPNITISILAS 406 K S+ +S FQKK+F +LYKIADIPFL +K KI DLIEK EKQPN+TI IL + Sbjct: 422 KAEEEAATGSDGISGFQKKVFDLLYKIADIPFLSEHKSKIFDLIEKAEKQPNLTIGILVA 481 Query: 405 VAVILVTVLFRTIFGG 358 V V+ V++ FR IFGG Sbjct: 482 VVVVFVSIFFRLIFGG 497
>CALX_PEA (O82709) Calnexin homolog precursor| Length = 551 Score = 84.7 bits (208), Expect = 2e-16 Identities = 40/67 (59%), Positives = 51/67 (76%) Frame = -3 Query: 558 SEDLSEFQKKIFSVLYKIADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVL 379 SE ++ QKK F +LYKIADI FL K KII++IEKGEKQPN+TI I+ SV ++ V++ Sbjct: 436 SEGIAGIQKKAFDLLYKIADIAFLSGQKEKIIEIIEKGEKQPNLTIGIIVSVVIVFVSIF 495 Query: 378 FRTIFGG 358 FR IFGG Sbjct: 496 FRLIFGG 502
>CALX2_ARATH (Q38798) Calnexin homolog 2 precursor| Length = 532 Score = 84.3 bits (207), Expect = 2e-16 Identities = 40/98 (40%), Positives = 58/98 (59%) Frame = -3 Query: 588 QKXXXXXXXESEDLSEFQKKIFSVLYKIADIPFLEPYKIKIIDLIEKGEKQPNITISILA 409 QK E++ L +QKK+F +LYK+ADI FL YK KI++LIEK E QPN+TI +L Sbjct: 414 QKAEDEAAGEADGLKSYQKKVFDLLYKVADISFLSAYKSKIMELIEKAETQPNLTIGVLI 473 Query: 408 SVAVILVTVLFRTIFGGXXXXXXXXXXXXXXXPSATEA 295 S+ ++ +++ F+ IFGG S +EA Sbjct: 474 SIVIVFLSLFFKLIFGGAKAKVEKKKPETAAETSTSEA 511
>CALX_HELTU (Q39994) Calnexin homolog precursor| Length = 540 Score = 79.3 bits (194), Expect = 8e-15 Identities = 33/66 (50%), Positives = 50/66 (75%) Frame = -3 Query: 555 EDLSEFQKKIFSVLYKIADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLF 376 + L QK +F VLYKIAD+PFL +K+K+++LIEK E QPNITI ++ S+ V++ ++L Sbjct: 426 DGLKGIQKAVFDVLYKIADLPFLGDHKVKVLELIEKAETQPNITIGVIVSIIVVIFSILL 485 Query: 375 RTIFGG 358 + +FGG Sbjct: 486 KLLFGG 491
>CALX1_ARATH (P29402) Calnexin homolog 1 precursor| Length = 530 Score = 73.2 bits (178), Expect = 5e-13 Identities = 32/77 (41%), Positives = 49/77 (63%) Frame = -3 Query: 588 QKXXXXXXXESEDLSEFQKKIFSVLYKIADIPFLEPYKIKIIDLIEKGEKQPNITISILA 409 QK ++ L +QK +F +L K+AD+ FL YK KI +LIEK E+QPN+TI +L Sbjct: 412 QKAEEEAAGSADGLKSYQKVVFDLLNKVADLSFLSAYKSKITELIEKAEQQPNLTIGVLV 471 Query: 408 SVAVILVTVLFRTIFGG 358 ++ V+ ++ + IFGG Sbjct: 472 AIVVVFFSLFLKLIFGG 488
>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) (SRECRP-1) Length = 866 Score = 31.6 bits (70), Expect = 1.8 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = -2 Query: 415 FGLSCCHPCYCALQNHFRWQEGSGTCEA----RCCGEEAQCHGSRC 290 +G C CYC+ + Q G+ C A R C + C+ S C Sbjct: 177 WGAQCASACYCSATSRCDPQTGACLCHAGWWGRSCNNQCACNSSPC 222
>KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-associated protein| 5.6) (Ultrahigh sulfur keratin-associated protein 5.6) Length = 129 Score = 30.8 bits (68), Expect = 3.1 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -2 Query: 406 SCCHPCYCALQNHFRWQEGSGTCEARCC 323 SCC PCYC+ GS C++ CC Sbjct: 89 SCCKPCYCSSGC------GSSCCQSSCC 110
>ZNF77_HUMAN (Q15935) Zinc finger protein 77 (ZNFpT1)| Length = 545 Score = 30.4 bits (67), Expect = 4.0 Identities = 10/32 (31%), Positives = 17/32 (53%) Frame = -2 Query: 391 CYCALQNHFRWQEGSGTCEARCCGEEAQCHGS 296 CY + ++H R G C+ + CG+ C+ S Sbjct: 307 CYSSFRDHVRTHTGEKPCQCKHCGKAFTCYSS 338 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,589,802 Number of Sequences: 219361 Number of extensions: 1066966 Number of successful extensions: 3306 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3301 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)