| Clone Name | rbags5a14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | BGLS_SCHCO (P29091) Beta-glucosidase (EC 3.2.1.21) (Gentiobiase)... | 32 | 1.8 | 2 | GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region ge... | 30 | 5.2 | 3 | HAM_DROME (Q8I7Z8) Transcription factor hamlet | 29 | 8.8 |
|---|
>BGLS_SCHCO (P29091) Beta-glucosidase (EC 3.2.1.21) (Gentiobiase) (Cellobiase)| (Beta-D-glucoside glucohydrolase) (Fragment) Length = 192 Score = 31.6 bits (70), Expect = 1.8 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = +1 Query: 442 VMDWHSGDAADGVAMLSPATMPKVVPSET-GTILDGSWPEHGALEAALWS 588 ++ WH GDA V ++ A +V T G I+ +W EH ++A +WS Sbjct: 70 LLAWHDGDAL--VQAVADANENTIVAVNTVGAIITEAWIEHPNVKAVVWS 117
>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein| Length = 1509 Score = 30.0 bits (66), Expect = 5.2 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = -2 Query: 581 SAASNAPCSGQEPSKIVPVSEGTTFGIVAGDNIATPSAASPECQSMTLCGP 429 S +AP Q+P+ PV++G G A D+ A+P+ A + L GP Sbjct: 670 SVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGP 720
>HAM_DROME (Q8I7Z8) Transcription factor hamlet| Length = 990 Score = 29.3 bits (64), Expect = 8.8 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = -1 Query: 435 RAHQETHHGALPPQEARATEAGAQAPAPPR 346 R HQ H LP Q A A + PAPPR Sbjct: 403 RHHQHPHQHPLPHQPHLAATATSTCPAPPR 432 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,561,609 Number of Sequences: 219361 Number of extensions: 1041510 Number of successful extensions: 4574 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 4403 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4569 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)