| Clone Name | rbags5a10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|BX322655.10| Zebrafish DNA sequence from clone DKEYP-53E12 in linkage group 8, complete sequence Length = 184723 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 gtgctgctccatatgtcttg 118 |||||||||||||||||||| Sbjct: 76747 gtgctgctccatatgtcttg 76766
>gb|AC141899.4| Mus musculus BAC clone RP23-116G15 from chromosome 10, complete sequence Length = 210306 Score = 38.2 bits (19), Expect = 6.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 85 gtctttgagattcagtgctgctc 107 |||||||||||| |||||||||| Sbjct: 194531 gtctttgagattgagtgctgctc 194509
>gb|AC162908.4| Mus musculus BAC clone RP24-296A15 from chromosome 10, complete sequence Length = 170988 Score = 38.2 bits (19), Expect = 6.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 85 gtctttgagattcagtgctgctc 107 |||||||||||| |||||||||| Sbjct: 37227 gtctttgagattgagtgctgctc 37205
>gb|AC091209.3| Drosophila melanogaster 3L BAC RP98-3G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194979 Score = 38.2 bits (19), Expect = 6.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 58 actgcatcggagccgccactgtc 80 |||||||||||| |||||||||| Sbjct: 173374 actgcatcggaggcgccactgtc 173352
>gb|AC010071.6| Drosophila melanogaster 3L BAC RP98-18G16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172540 Score = 38.2 bits (19), Expect = 6.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 58 actgcatcggagccgccactgtc 80 |||||||||||| |||||||||| Sbjct: 83171 actgcatcggaggcgccactgtc 83193
>ref|NM_140498.1| Drosophila melanogaster CG7003-RA (CG7003), mRNA Length = 4100 Score = 38.2 bits (19), Expect = 6.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 58 actgcatcggagccgccactgtc 80 |||||||||||| |||||||||| Sbjct: 2936 actgcatcggaggcgccactgtc 2958
>gb|AY075187.1| Drosophila melanogaster AT13263 full length cDNA Length = 3625 Score = 38.2 bits (19), Expect = 6.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 58 actgcatcggagccgccactgtc 80 |||||||||||| |||||||||| Sbjct: 2936 actgcatcggaggcgccactgtc 2958
>gb|AE003532.3| Drosophila melanogaster chromosome 3L, section 53 of 83 of the complete sequence Length = 295875 Score = 38.2 bits (19), Expect = 6.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 58 actgcatcggagccgccactgtc 80 |||||||||||| |||||||||| Sbjct: 233927 actgcatcggaggcgccactgtc 233905 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 596,261 Number of Sequences: 3902068 Number of extensions: 596261 Number of successful extensions: 38091 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 38075 Number of HSP's gapped (non-prelim): 16 length of query: 129 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 108 effective length of database: 17,151,101,840 effective search space: 1852318998720 effective search space used: 1852318998720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)