ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags5a08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK104352.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 1e-75
2dbj|AK065072.1| Oryza sativa (japonica cultivar-group) cDNA clon... 283 3e-73
3gb|AY103824.1| Zea mays PCO135715 mRNA sequence 238 2e-59
4dbj|AK066195.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 1e-41
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
6dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
7dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
8dbj|D29698.1|RICYK10 Oryza sativa mRNA, partial homologous to c... 131 3e-27
9gb|AY109572.1| Zea mays CL1008_1 mRNA sequence 105 1e-19
10ref|XM_468113.1| Oryza sativa (japonica cultivar-group), mRNA 90 9e-15
11ref|XM_468112.1| Oryza sativa (japonica cultivar-group), mRNA 90 9e-15
12ref|XM_507011.1| PREDICTED Oryza sativa (japonica cultivar-group... 90 9e-15
13dbj|AK119213.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 9e-15
14dbj|AK073762.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 9e-15
15dbj|AK060474.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 9e-15
16dbj|AK098903.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
17dbj|AK061837.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
18dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
19dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
20gb|BT018159.1| Zea mays clone EL01N0556C01.c mRNA sequence 76 1e-10
21dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
22dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
23dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
24gb|AY109707.1| Zea mays CL21464_1 mRNA sequence 52 0.002
25gb|M87646.1|SPICPN10X Spinach chaperonin 10 (CPN10) mRNA, comple... 52 0.002
26dbj|AP004472.1| Lotus japonicus genomic DNA, chromosome 4, clone... 50 0.008
27ref|NM_122079.3| Arabidopsis thaliana CPN20 (CHAPERONIN 20); cal... 44 0.47
28ref|NM_180714.1| Arabidopsis thaliana CPN20 (CHAPERONIN 20); cal... 44 0.47
29gb|AY062971.1| Arabidopsis thaliana putative chloroplast Cpn21 p... 44 0.47
30gb|AY034979.1| Arabidopsis thaliana putative chloroplast Cpn21 p... 44 0.47
31emb|AJ010818.1|ATH010818 Arabidopsis thaliana mRNA for chloropla... 44 0.47
32gb|AF428366.1|AF428366 Arabidopsis thaliana AT5g20720/T1M15_120 ... 44 0.47
33gb|AF428339.1|AF428339 Arabidopsis thaliana AT5g20720/T1M15_120 ... 44 0.47
34gb|AF268068.1|AF268068 Arabidopsis thaliana chaperonin 10 (CHCPN... 44 0.47
35gb|BT004237.1| Arabidopsis thaliana clone RAFL14-89-L14 (R20431) 44 0.47
36dbj|AB007130.1| Arabidopsis thaliana mRNA for chaperonin 20, com... 44 0.47
37gb|AF059037.1|AF059037 Arabidopsis thaliana chaperonin 10 (CPN10... 44 0.47
38gb|AC165975.4| Mus musculus BAC clone RP23-3L23 from chromosome ... 42 1.9
39gb|AY542873.2| Medicago truncatula calmodulin-like protein 2 (CA... 42 1.9
40gb|AC102361.13| Mus musculus chromosome 18, clone RP23-37I2, com... 42 1.9
41gb|AY373585.1| Homo sapiens myeloid/lymphoid or mixed-lineage le... 42 1.9
42ref|NM_005933.2| Homo sapiens myeloid/lymphoid or mixed-lineage ... 42 1.9
43emb|Z69780.1|HSALL1X37 H.sapiens ALL-1 gene exon 37 42 1.9
44dbj|AP001267.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.9
45dbj|D90041.1|HUMAACTA2 Homo sapiens mRNA for arylamine N-acetylt... 42 1.9
46dbj|AB209508.1| Homo sapiens mRNA for myeloid/lymphoid or mixed-... 42 1.9
47gb|L04731.1|HUMTRLALL1 Homo sapiens translocation T(4:11) of ALL... 42 1.9
48gb|AC149090.2| Mus musculus BAC clone RP24-130G10 from chromosom... 40 7.4
49gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 7.4
50gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC... 40 7.4
51gb|AC116180.4| Mus musculus BAC clone RP24-167M11 from chromosom... 40 7.4
52emb|AL356234.18| Human DNA sequence from clone RP11-95M15 on chr... 40 7.4
53gb|AC132516.4| Homo sapiens 3 BAC RP11-264A3 (Roswell Park Cance... 40 7.4
54gb|AC116301.8| Homo sapiens 3 BAC RP11-625D20 (Roswell Park Canc... 40 7.4
55ref|NM_001031051.1| Gallus gallus similar to hypothetical protei... 40 7.4
56emb|AL671968.17| Mouse DNA sequence from clone RP23-191E3 on chr... 40 7.4
57emb|AJ719771.1| Gallus gallus mRNA for hypothetical protein, clo... 40 7.4
58gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H14 map... 40 7.4
59gb|AC087774.27| Homo sapiens 12p BAC RP11-633O13 (Roswell Park C... 40 7.4
60gb|AC097462.2| Homo sapiens BAC clone RP11-18O11 from 4, complet... 40 7.4
61gb|AC147984.3| Mus musculus BAC clone RP24-402A9 from chromosome... 40 7.4
62ref|XM_573464.1| PREDICTED: Rattus norvegicus similar to complem... 40 7.4
63gb|AF436847.2| Rattus norvegicus complement factor H-related pro... 40 7.4
64dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 7.4
65gb|AF233745.1|AF233745 Lycopersicon esculentum chaperonin 21 pre... 40 7.4
66gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta... 40 7.4
67gb|AC147631.3| Mus musculus BAC clone RP23-341H6 from 9, complet... 40 7.4
68emb|AL672147.10| Mouse DNA sequence from clone RP23-434N14 on ch... 40 7.4
69emb|AL732525.13| Mouse DNA sequence from clone RP23-358I10 on ch... 40 7.4

>dbj|AK104352.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G10, full
           insert sequence
          Length = 1129

 Score =  291 bits (147), Expect = 1e-75
 Identities = 291/339 (85%)
 Strand = Plus / Minus

                                                                       
Query: 179 cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 238
           |||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||
Sbjct: 926 cagccatcacatctgatactctcaagacaatgtagttggtgccatcagctcccttgaact 867

                                                                       
Query: 239 cgccgcctgcgtacttggagtacagcacagtgctgcctggtgacaccgacagcggctgcc 298
           | | |||||||||||||||||||| |||||||||||| | ||| || ||||  |||||||
Sbjct: 866 cactgcctgcgtacttggagtacatcacagtgctgcccgctgaaactgacaatggctgcc 807

                                                                       
Query: 299 tgttgccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggct 358
           | |||||||| || || || | ||| |||||||| |||||||||||||| || |||||||
Sbjct: 806 tcttgccttcatcatcaagagggcctggaccaacggctacaactgttccgattgatggct 747

                                                                       
Query: 359 tctccttggttgtctcggtgaggataagaccagcttcagtcttgtctgaagcctctgcaa 418
           ||||||| || || || ||||| ||||| ||| |  |||| ||||||  |||||| ||||
Sbjct: 746 tctccttagtggtttcagtgagaataaggccaccagcagttttgtcttcagcctcagcaa 687

                                                                       
Query: 419 ccttgatcagaacccggtcattgagaggcttcatgtctttgacatcatcagattcaagaa 478
           ||||||| |||||||||||||| || |||||||| ||||||||||||||||  |||||||
Sbjct: 686 ccttgatgagaacccggtcattaaggggcttcatatctttgacatcatcagtctcaagaa 627

                                                  
Query: 479 tacctatgatgtcatcctctttcataataagatgcttgg 517
            ||| ||||| ||||||||||| | ||||||||| ||||
Sbjct: 626 caccaatgatatcatcctcttttagaataagatgtttgg 588



to top

>dbj|AK065072.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K09, full
           insert sequence
          Length = 1130

 Score =  283 bits (143), Expect = 3e-73
 Identities = 290/339 (85%)
 Strand = Plus / Minus

                                                                       
Query: 179 cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 238
           |||||||||||||||| |||||||| ||||||||||||| ||||||||  ||||||||||
Sbjct: 927 cagccatcacatctgatactctcaagacaatgtagttggcgccatcagctcccttgaact 868

                                                                       
Query: 239 cgccgcctgcgtacttggagtacagcacagtgctgcctggtgacaccgacagcggctgcc 298
           | | |||||||||||||||||||| |||||||||||| | ||| || ||||  |||||||
Sbjct: 867 cactgcctgcgtacttggagtacatcacagtgctgcccgctgaaactgacaatggctgcc 808

                                                                       
Query: 299 tgttgccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggct 358
           | |||||||| || || || | ||| |||||||| |||||||||||||| || |||||||
Sbjct: 807 tcttgccttcatcatcaagagggcctggaccaacggctacaactgttccgattgatggct 748

                                                                       
Query: 359 tctccttggttgtctcggtgaggataagaccagcttcagtcttgtctgaagcctctgcaa 418
           ||||||| || || || ||||| ||||| ||| |  |||| ||||||  |||||| ||||
Sbjct: 747 tctccttagtggtttcagtgagaataaggccaccagcagttttgtcttcagcctcagcaa 688

                                                                       
Query: 419 ccttgatcagaacccggtcattgagaggcttcatgtctttgacatcatcagattcaagaa 478
           ||||||| |||||||||||||| || |||||||| ||||||||||||||||  |||||||
Sbjct: 687 ccttgatgagaacccggtcattaaggggcttcatatctttgacatcatcagtctcaagaa 628

                                                  
Query: 479 tacctatgatgtcatcctctttcataataagatgcttgg 517
            ||| ||||| ||||||||||| | ||||||||| ||||
Sbjct: 627 caccaatgatatcatcctcttttagaataagatgtttgg 589



to top

>gb|AY103824.1| Zea mays PCO135715 mRNA sequence
          Length = 1388

 Score =  238 bits (120), Expect = 2e-59
 Identities = 297/356 (83%)
 Strand = Plus / Minus

                                                                        
Query: 179  cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 238
            ||||||||||||| ||| |||||||||||||||||   |||||||| | |||||||||||
Sbjct: 1023 cagccatcacatccgacgctctcaacacaatgtaggccgtgccatccgcgcccttgaact 964

                                                                        
Query: 239  cgccgcctgcgtacttggagtacagcacagtgctgcctggtgacaccgacagcggctgcc 298
            | |  ||||| ||||||||||||||||| |||||||| |  ||||| ||||| ||||| |
Sbjct: 963  cactccctgcatacttggagtacagcactgtgctgcccgccgacactgacagtggctgtc 904

                                                                        
Query: 299  tgttgccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggct 358
            | |||||||||||||| || |  ||||| |||||||||||||| ||||| ||||| ||||
Sbjct: 903  tcttgccttcctcgtccagaggacccgggccaacagctacaaccgttcctatggacggct 844

                                                                        
Query: 359  tctccttggttgtctcggtgaggataagaccagcttcagtcttgtctgaagcctctgcaa 418
            |||| || ||||| || ||||||||||| ||  |   ||| ||||||   || |||||||
Sbjct: 843  tctctttagttgtttcagtgaggataaggcccccaggagttttgtcttcggcttctgcaa 784

                                                                        
Query: 419  ccttgatcagaacccggtcattgagaggcttcatgtctttgacatcatcagattcaagaa 478
            ||||||| ||||| ||||||||||||||||||||||| || |||||||| |  |||||||
Sbjct: 783  ccttgatgagaacacggtcattgagaggcttcatgtccttcacatcatctgtctcaagaa 724

                                                                    
Query: 479  tacctatgatgtcatcctctttcataataagatgcttggagttgttgtattcaacc 534
            |||| ||||| || || ||||| | |||||||||||| ||||  ||| ||||||||
Sbjct: 723  taccaatgatatcgtcttctttgagaataagatgctttgagtcattgaattcaacc 668



to top

>dbj|AK066195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052L05, full
           insert sequence
          Length = 1028

 Score =  178 bits (90), Expect = 1e-41
 Identities = 213/254 (83%)
 Strand = Plus / Minus

                                                                       
Query: 264 cacagtgctgcctggtgacaccgacagcggctgcctgttgccttcctcgtcgagtgagcc 323
           |||||||||||| | ||| || ||||  |||||||| |||||||| || || || | |||
Sbjct: 842 cacagtgctgcccgctgaaactgacaatggctgcctcttgccttcatcatcaagagggcc 783

                                                                       
Query: 324 cggaccaacagctacaactgttccaatggatggcttctccttggttgtctcggtgaggat 383
            |||||||| |||||||||||||| || |||||||||||||| || || || ||||| ||
Sbjct: 782 tggaccaacggctacaactgttccgattgatggcttctccttagtggtttcagtgagaat 723

                                                                       
Query: 384 aagaccagcttcagtcttgtctgaagcctctgcaaccttgatcagaacccggtcattgag 443
           ||| ||| |  |||| ||||||  |||||| ||||||||||| |||||||||||||| ||
Sbjct: 722 aaggccaccagcagttttgtcttcagcctcagcaaccttgatgagaacccggtcattaag 663

                                                                       
Query: 444 aggcttcatgtctttgacatcatcagattcaagaatacctatgatgtcatcctctttcat 503
            |||||||| ||||||||||||||||  ||||||| ||| ||||| ||||||||||| | 
Sbjct: 662 gggcttcatatctttgacatcatcagtctcaagaacaccaatgatatcatcctcttttag 603

                         
Query: 504 aataagatgcttgg 517
           ||||||||| ||||
Sbjct: 602 aataagatgtttgg 589



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  157 bits (79), Expect = 5e-35
 Identities = 142/163 (87%)
 Strand = Plus / Minus

                                                                           
Query: 179     cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 238
               |||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||
Sbjct: 4964203 cagccatcacatctgatactctcaagacaatgtagttggtgccatcagctcccttgaact 4964144

                                                                           
Query: 239     cgccgcctgcgtacttggagtacagcacagtgctgcctggtgacaccgacagcggctgcc 298
               | | |||||||||||||||||||| |||||||||||| | ||| || ||||  |||||||
Sbjct: 4964143 cactgcctgcgtacttggagtacatcacagtgctgcccgctgaaactgacaatggctgcc 4964084

                                                          
Query: 299     tgttgccttcctcgtcgagtgagcccggaccaacagctacaac 341
               | |||||||| || || || | ||| |||||||| ||||||||
Sbjct: 4964083 tcttgccttcatcatcaagagggcctggaccaacggctacaac 4964041



 Score =  157 bits (79), Expect = 5e-35
 Identities = 142/163 (87%)
 Strand = Plus / Minus

                                                                           
Query: 179     cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 238
               |||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||
Sbjct: 4949083 cagccatcacatctgatactctcaagacaatgtagttggtgccatcagctcccttgaact 4949024

                                                                           
Query: 239     cgccgcctgcgtacttggagtacagcacagtgctgcctggtgacaccgacagcggctgcc 298
               | | |||||||||||||||||||| |||||||||||| | ||| || ||||  |||||||
Sbjct: 4949023 cactgcctgcgtacttggagtacatcacagtgctgcccgctgaaactgacaatggctgcc 4948964

                                                          
Query: 299     tgttgccttcctcgtcgagtgagcccggaccaacagctacaac 341
               | |||||||| || || || | ||| |||||||| ||||||||
Sbjct: 4948963 tcttgccttcatcatcaagagggcctggaccaacggctacaac 4948921



 Score =  103 bits (52), Expect = 6e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                           
Query: 418     accttgatcagaacccggtcattgagaggcttcatgtctttgacatcatcagattcaaga 477
               |||||||| |||||||||||||| || |||||||| ||||||||||||||||  ||||||
Sbjct: 4962422 accttgatgagaacccggtcattaaggggcttcatatctttgacatcatcagtctcaaga 4962363

                                                       
Query: 478     atacctatgatgtcatcctctttcataataagatgcttgg 517
               | ||| ||||| ||||||||||| | ||||||||| ||||
Sbjct: 4962362 acaccaatgatatcatcctcttttagaataagatgtttgg 4962323



 Score =  103 bits (52), Expect = 6e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                           
Query: 418     accttgatcagaacccggtcattgagaggcttcatgtctttgacatcatcagattcaaga 477
               |||||||| |||||||||||||| || |||||||| ||||||||||||||||  ||||||
Sbjct: 4947302 accttgatgagaacccggtcattaaggggcttcatatctttgacatcatcagtctcaaga 4947243

                                                       
Query: 478     atacctatgatgtcatcctctttcataataagatgcttgg 517
               | ||| ||||| ||||||||||| | ||||||||| ||||
Sbjct: 4947242 acaccaatgatatcatcctcttttagaataagatgtttgg 4947203



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                           
Query: 340     actgttccaatggatggcttctccttggttgtctcggtgaggataagaccagcttcagtc 399
               |||||||| || |||||||||||||| || || || ||||| ||||| ||| |  |||| 
Sbjct: 4962659 actgttccgattgatggcttctccttagtggtttcagtgagaataaggccaccagcagtt 4962600

                                     
Query: 400     ttgtctgaagcctctgcaacct 421
               ||||||  |||||| |||||||
Sbjct: 4962599 ttgtcttcagcctcagcaacct 4962578



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                           
Query: 340     actgttccaatggatggcttctccttggttgtctcggtgaggataagaccagcttcagtc 399
               |||||||| || |||||||||||||| || || || ||||| ||||| ||| |  |||| 
Sbjct: 4947539 actgttccgattgatggcttctccttagtggtttcagtgagaataaggccaccagcagtt 4947480

                                     
Query: 400     ttgtctgaagcctctgcaacct 421
               ||||||  |||||| |||||||
Sbjct: 4947479 ttgtcttcagcctcagcaacct 4947458



to top

>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:B1172G12
          Length = 171974

 Score =  157 bits (79), Expect = 5e-35
 Identities = 142/163 (87%)
 Strand = Plus / Minus

                                                                        
Query: 179  cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 238
            |||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||
Sbjct: 6317 cagccatcacatctgatactctcaagacaatgtagttggtgccatcagctcccttgaact 6258

                                                                        
Query: 239  cgccgcctgcgtacttggagtacagcacagtgctgcctggtgacaccgacagcggctgcc 298
            | | |||||||||||||||||||| |||||||||||| | ||| || ||||  |||||||
Sbjct: 6257 cactgcctgcgtacttggagtacatcacagtgctgcccgctgaaactgacaatggctgcc 6198

                                                       
Query: 299  tgttgccttcctcgtcgagtgagcccggaccaacagctacaac 341
            | |||||||| || || || | ||| |||||||| ||||||||
Sbjct: 6197 tcttgccttcatcatcaagagggcctggaccaacggctacaac 6155



 Score =  103 bits (52), Expect = 6e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                        
Query: 418  accttgatcagaacccggtcattgagaggcttcatgtctttgacatcatcagattcaaga 477
            |||||||| |||||||||||||| || |||||||| ||||||||||||||||  ||||||
Sbjct: 4536 accttgatgagaacccggtcattaaggggcttcatatctttgacatcatcagtctcaaga 4477

                                                    
Query: 478  atacctatgatgtcatcctctttcataataagatgcttgg 517
            | ||| ||||| ||||||||||| | ||||||||| ||||
Sbjct: 4476 acaccaatgatatcatcctcttttagaataagatgtttgg 4437



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                        
Query: 340  actgttccaatggatggcttctccttggttgtctcggtgaggataagaccagcttcagtc 399
            |||||||| || |||||||||||||| || || || ||||| ||||| ||| |  |||| 
Sbjct: 4773 actgttccgattgatggcttctccttagtggtttcagtgagaataaggccaccagcagtt 4714

                                  
Query: 400  ttgtctgaagcctctgcaacct 421
            ||||||  |||||| |||||||
Sbjct: 4713 ttgtcttcagcctcagcaacct 4692



to top

>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0528E04
          Length = 170701

 Score =  157 bits (79), Expect = 5e-35
 Identities = 142/163 (87%)
 Strand = Plus / Minus

                                                                          
Query: 179    cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 238
              |||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||
Sbjct: 151686 cagccatcacatctgatactctcaagacaatgtagttggtgccatcagctcccttgaact 151627

                                                                          
Query: 239    cgccgcctgcgtacttggagtacagcacagtgctgcctggtgacaccgacagcggctgcc 298
              | | |||||||||||||||||||| |||||||||||| | ||| || ||||  |||||||
Sbjct: 151626 cactgcctgcgtacttggagtacatcacagtgctgcccgctgaaactgacaatggctgcc 151567

                                                         
Query: 299    tgttgccttcctcgtcgagtgagcccggaccaacagctacaac 341
              | |||||||| || || || | ||| |||||||| ||||||||
Sbjct: 151566 tcttgccttcatcatcaagagggcctggaccaacggctacaac 151524



 Score =  157 bits (79), Expect = 5e-35
 Identities = 142/163 (87%)
 Strand = Plus / Minus

                                                                          
Query: 179    cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 238
              |||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||
Sbjct: 136566 cagccatcacatctgatactctcaagacaatgtagttggtgccatcagctcccttgaact 136507

                                                                          
Query: 239    cgccgcctgcgtacttggagtacagcacagtgctgcctggtgacaccgacagcggctgcc 298
              | | |||||||||||||||||||| |||||||||||| | ||| || ||||  |||||||
Sbjct: 136506 cactgcctgcgtacttggagtacatcacagtgctgcccgctgaaactgacaatggctgcc 136447

                                                         
Query: 299    tgttgccttcctcgtcgagtgagcccggaccaacagctacaac 341
              | |||||||| || || || | ||| |||||||| ||||||||
Sbjct: 136446 tcttgccttcatcatcaagagggcctggaccaacggctacaac 136404



 Score =  103 bits (52), Expect = 6e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                          
Query: 418    accttgatcagaacccggtcattgagaggcttcatgtctttgacatcatcagattcaaga 477
              |||||||| |||||||||||||| || |||||||| ||||||||||||||||  ||||||
Sbjct: 149905 accttgatgagaacccggtcattaaggggcttcatatctttgacatcatcagtctcaaga 149846

                                                      
Query: 478    atacctatgatgtcatcctctttcataataagatgcttgg 517
              | ||| ||||| ||||||||||| | ||||||||| ||||
Sbjct: 149845 acaccaatgatatcatcctcttttagaataagatgtttgg 149806



 Score =  103 bits (52), Expect = 6e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                          
Query: 418    accttgatcagaacccggtcattgagaggcttcatgtctttgacatcatcagattcaaga 477
              |||||||| |||||||||||||| || |||||||| ||||||||||||||||  ||||||
Sbjct: 134785 accttgatgagaacccggtcattaaggggcttcatatctttgacatcatcagtctcaaga 134726

                                                      
Query: 478    atacctatgatgtcatcctctttcataataagatgcttgg 517
              | ||| ||||| ||||||||||| | ||||||||| ||||
Sbjct: 134725 acaccaatgatatcatcctcttttagaataagatgtttgg 134686



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                          
Query: 340    actgttccaatggatggcttctccttggttgtctcggtgaggataagaccagcttcagtc 399
              |||||||| || |||||||||||||| || || || ||||| ||||| ||| |  |||| 
Sbjct: 150142 actgttccgattgatggcttctccttagtggtttcagtgagaataaggccaccagcagtt 150083

                                    
Query: 400    ttgtctgaagcctctgcaacct 421
              ||||||  |||||| |||||||
Sbjct: 150082 ttgtcttcagcctcagcaacct 150061



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                          
Query: 340    actgttccaatggatggcttctccttggttgtctcggtgaggataagaccagcttcagtc 399
              |||||||| || |||||||||||||| || || || ||||| ||||| ||| |  |||| 
Sbjct: 135022 actgttccgattgatggcttctccttagtggtttcagtgagaataaggccaccagcagtt 134963

                                    
Query: 400    ttgtctgaagcctctgcaacct 421
              ||||||  |||||| |||||||
Sbjct: 134962 ttgtcttcagcctcagcaacct 134941



to top

>dbj|D29698.1|RICYK10 Oryza sativa mRNA, partial  homologous to chaperonin 10 gene
          Length = 319

 Score =  131 bits (66), Expect = 3e-27
 Identities = 89/97 (91%)
 Strand = Plus / Minus

                                                                       
Query: 179 cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 238
           |||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||
Sbjct: 125 cagccatcacatctgatactctcaagacaatgtagttggtgccatcagctcccttgaact 66

                                                
Query: 239 cgccgcctgcgtacttggagtacagcacagtgctgcc 275
           | | |||||| ||||||||||||| ||||||||||||
Sbjct: 65  cactgcctgcntacttggagtacatcacagtgctgcc 29



to top

>gb|AY109572.1| Zea mays CL1008_1 mRNA sequence
          Length = 1955

 Score =  105 bits (53), Expect = 1e-19
 Identities = 252/320 (78%)
 Strand = Plus / Minus

                                                                        
Query: 181  gccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaactcg 240
            ||||||| ||| ||| | |||| ||| |||||||| ||||| || | |||||||||||||
Sbjct: 1728 gccatcagatccgacgccctcagcacgatgtagttcgtgccgtcggcgcccttgaactcg 1669

                                                                        
Query: 241  ccgcctgcgtacttggagtacagcacagtgctgcctggtgacaccgacagcggctgcctg 300
            | ||| ||||||||||||||||| |||||||| || |  || || |||||||   |||| 
Sbjct: 1668 ctgccggcgtacttggagtacaggacagtgctccccgcggagacggacagcgcgagcctc 1609

                                                                        
Query: 301  ttgccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggcttc 360
            | ||| |||||||| |     || || ||||| ||||| || ||||| || |||||||||
Sbjct: 1608 tcgccatcctcgtccannnnncctgggccaaccgctacgaccgttccgatagatggcttc 1549

                                                                        
Query: 361  tccttggttgtctcggtgaggataagaccagcttcagtcttgtctgaagcctctgcaacc 420
            |||||||  || || || || |  || ||  ||  ||| ||||||  ||| || ||||||
Sbjct: 1548 tccttggcagtttccgtaagcagtaggcctcctggagttttgtcttcagcttcagcaacc 1489

                                                                        
Query: 421  ttgatcagaacccggtcattgagaggcttcatgtctttgacatcatcagattcaagaata 480
            ||||| ||||| ||||| || ||||||||||||||||| || ||||||| ||| |  |||
Sbjct: 1488 ttgattagaacacggtcgttcagaggcttcatgtctttcacgtcatcagtttctaagata 1429

                                
Query: 481  cctatgatgtcatcctcttt 500
            ||||| | ||||||||||||
Sbjct: 1428 cctataacgtcatcctcttt 1409



to top

>ref|XM_468113.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1056

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 156/193 (80%)
 Strand = Plus / Minus

                                                                       
Query: 179 cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 238
           ||||||| | ||||||||| | |||||| |||||| | |||||||||| |||||||||||
Sbjct: 860 cagccattagatctgacacccgcaacactatgtagctcgtgccatcagagcccttgaact 801

                                                                       
Query: 239 cgccgcctgcgtacttggagtacagcacagtgctgcctggtgacaccgacagcggctgcc 298
           ||| ||| || || ||||| || || |||||||||||||  || |||||||  ||   ||
Sbjct: 800 cgctgccagcatatttggaatatagaacagtgctgcctgcagagaccgacaatggaatcc 741

                                                                       
Query: 299 tgttgccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggct 358
           | ||||||||||| || || |  || || |||||||| || || |||||||| || ||||
Sbjct: 740 tcttgccttcctcatccagaggaccagggccaacagccacgaccgttccaatagacggct 681

                        
Query: 359 tctccttggttgt 371
           ||||||| |||||
Sbjct: 680 tctcctttgttgt 668



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                       
Query: 442 agaggcttcatgtctttgacatcatcagattcaagaatacctatgatgtcatcctctttc 501
           |||||||||||||| ||  |||||||||  || |||||||| ||||||||||||||||| 
Sbjct: 597 agaggcttcatgtcctttgcatcatcagtctccagaataccaatgatgtcatcctcttta 538

                            
Query: 502 ataataagatgcttgga 518
           | ||| ||||| |||||
Sbjct: 537 agaatcagatggttgga 521



to top

>ref|XM_468112.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 877

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 156/193 (80%)
 Strand = Plus / Minus

                                                                       
Query: 179 cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 238
           ||||||| | ||||||||| | |||||| |||||| | |||||||||| |||||||||||
Sbjct: 678 cagccattagatctgacacccgcaacactatgtagctcgtgccatcagagcccttgaact 619

                                                                       
Query: 239 cgccgcctgcgtacttggagtacagcacagtgctgcctggtgacaccgacagcggctgcc 298
           ||| ||| || || ||||| || || |||||||||||||  || |||||||  ||   ||
Sbjct: 618 cgctgccagcatatttggaatatagaacagtgctgcctgcagagaccgacaatggaatcc 559

                                                                       
Query: 299 tgttgccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggct 358
           | ||||||||||| || || |  || || |||||||| || || |||||||| || ||||
Sbjct: 558 tcttgccttcctcatccagaggaccagggccaacagccacgaccgttccaatagacggct 499

                        
Query: 359 tctccttggttgt 371
           ||||||| |||||
Sbjct: 498 tctcctttgttgt 486



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                       
Query: 442 agaggcttcatgtctttgacatcatcagattcaagaatacctatgatgtcatcctctttc 501
           |||||||||||||| ||  |||||||||  || |||||||| ||||||||||||||||| 
Sbjct: 415 agaggcttcatgtcctttgcatcatcagtctccagaataccaatgatgtcatcctcttta 356

                            
Query: 502 ataataagatgcttgga 518
           | ||| ||||| |||||
Sbjct: 355 agaatcagatggttgga 339



to top

>ref|XM_507011.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1369_G08.10-2
           mRNA
          Length = 1111

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 156/193 (80%)
 Strand = Plus / Minus

                                                                       
Query: 179 cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 238
           ||||||| | ||||||||| | |||||| |||||| | |||||||||| |||||||||||
Sbjct: 859 cagccattagatctgacacccgcaacactatgtagctcgtgccatcagagcccttgaact 800

                                                                       
Query: 239 cgccgcctgcgtacttggagtacagcacagtgctgcctggtgacaccgacagcggctgcc 298
           ||| ||| || || ||||| || || |||||||||||||  || |||||||  ||   ||
Sbjct: 799 cgctgccagcatatttggaatatagaacagtgctgcctgcagagaccgacaatggaatcc 740

                                                                       
Query: 299 tgttgccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggct 358
           | ||||||||||| || || |  || || |||||||| || || |||||||| || ||||
Sbjct: 739 tcttgccttcctcatccagaggaccagggccaacagccacgaccgttccaatagacggct 680

                        
Query: 359 tctccttggttgt 371
           ||||||| |||||
Sbjct: 679 tctcctttgttgt 667



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                       
Query: 442 agaggcttcatgtctttgacatcatcagattcaagaatacctatgatgtcatcctctttc 501
           |||||||||||||| ||  |||||||||  || |||||||| ||||||||||||||||| 
Sbjct: 596 agaggcttcatgtcctttgcatcatcagtctccagaataccaatgatgtcatcctcttta 537

                            
Query: 502 ataataagatgcttgga 518
           | ||| ||||| |||||
Sbjct: 536 agaatcagatggttgga 520



to top

>dbj|AK119213.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-E07, full
           insert sequence
          Length = 877

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 156/193 (80%)
 Strand = Plus / Minus

                                                                       
Query: 179 cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 238
           ||||||| | ||||||||| | |||||| |||||| | |||||||||| |||||||||||
Sbjct: 678 cagccattagatctgacacccgcaacactatgtagctcgtgccatcagagcccttgaact 619

                                                                       
Query: 239 cgccgcctgcgtacttggagtacagcacagtgctgcctggtgacaccgacagcggctgcc 298
           ||| ||| || || ||||| || || |||||||||||||  || |||||||  ||   ||
Sbjct: 618 cgctgccagcatatttggaatatagaacagtgctgcctgcagagaccgacaatggaatcc 559

                                                                       
Query: 299 tgttgccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggct 358
           | ||||||||||| || || |  || || |||||||| || || |||||||| || ||||
Sbjct: 558 tcttgccttcctcatccagaggaccagggccaacagccacgaccgttccaatagacggct 499

                        
Query: 359 tctccttggttgt 371
           ||||||| |||||
Sbjct: 498 tctcctttgttgt 486



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                       
Query: 442 agaggcttcatgtctttgacatcatcagattcaagaatacctatgatgtcatcctctttc 501
           |||||||||||||| ||  |||||||||  || |||||||| ||||||||||||||||| 
Sbjct: 415 agaggcttcatgtcctttgcatcatcagtctccagaataccaatgatgtcatcctcttta 356

                            
Query: 502 ataataagatgcttgga 518
           | ||| ||||| |||||
Sbjct: 355 agaatcagatggttgga 339



to top

>dbj|AK073762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067L06, full
           insert sequence
          Length = 1111

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 156/193 (80%)
 Strand = Plus / Minus

                                                                       
Query: 179 cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 238
           ||||||| | ||||||||| | |||||| |||||| | |||||||||| |||||||||||
Sbjct: 859 cagccattagatctgacacccgcaacactatgtagctcgtgccatcagagcccttgaact 800

                                                                       
Query: 239 cgccgcctgcgtacttggagtacagcacagtgctgcctggtgacaccgacagcggctgcc 298
           ||| ||| || || ||||| || || |||||||||||||  || |||||||  ||   ||
Sbjct: 799 cgctgccagcatatttggaatatagaacagtgctgcctgcagagaccgacaatggaatcc 740

                                                                       
Query: 299 tgttgccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggct 358
           | ||||||||||| || || |  || || |||||||| || || |||||||| || ||||
Sbjct: 739 tcttgccttcctcatccagaggaccagggccaacagccacgaccgttccaatagacggct 680

                        
Query: 359 tctccttggttgt 371
           ||||||| |||||
Sbjct: 679 tctcctttgttgt 667



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                       
Query: 442 agaggcttcatgtctttgacatcatcagattcaagaatacctatgatgtcatcctctttc 501
           |||||||||||||| ||  |||||||||  || |||||||| ||||||||||||||||| 
Sbjct: 596 agaggcttcatgtcctttgcatcatcagtctccagaataccaatgatgtcatcctcttta 537

                            
Query: 502 ataataagatgcttgga 518
           | ||| ||||| |||||
Sbjct: 536 agaatcagatggttgga 520



to top

>dbj|AK060474.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-F02, full
           insert sequence
          Length = 1056

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 156/193 (80%)
 Strand = Plus / Minus

                                                                       
Query: 179 cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 238
           ||||||| | ||||||||| | |||||| |||||| | |||||||||| |||||||||||
Sbjct: 860 cagccattagatctgacacccgcaacactatgtagctcgtgccatcagagcccttgaact 801

                                                                       
Query: 239 cgccgcctgcgtacttggagtacagcacagtgctgcctggtgacaccgacagcggctgcc 298
           ||| ||| || || ||||| || || |||||||||||||  || |||||||  ||   ||
Sbjct: 800 cgctgccagcatatttggaatatagaacagtgctgcctgcagagaccgacaatggaatcc 741

                                                                       
Query: 299 tgttgccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggct 358
           | ||||||||||| || || |  || || |||||||| || || |||||||| || ||||
Sbjct: 740 tcttgccttcctcatccagaggaccagggccaacagccacgaccgttccaatagacggct 681

                        
Query: 359 tctccttggttgt 371
           ||||||| |||||
Sbjct: 680 tctcctttgttgt 668



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                       
Query: 442 agaggcttcatgtctttgacatcatcagattcaagaatacctatgatgtcatcctctttc 501
           |||||||||||||| ||  |||||||||  || |||||||| ||||||||||||||||| 
Sbjct: 597 agaggcttcatgtcctttgcatcatcagtctccagaataccaatgatgtcatcctcttta 538

                            
Query: 502 ataataagatgcttgga 518
           | ||| ||||| |||||
Sbjct: 537 agaatcagatggttgga 521



to top

>dbj|AK098903.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002C22, full
           insert sequence
          Length = 1016

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 408 agcctctgcaaccttgatcagaacccggtcattgagaggcttcatgtctttgacatcatc 467
           ||||||||||||||| || ||||| |||||||| || |||||||  ||||| ||||||||
Sbjct: 597 agcctctgcaaccttaatgagaacacggtcattcagtggcttcagatctttcacatcatc 538

                                                        
Query: 468 agattcaagaatacctatgatgtcatcctctttcataataagatg 512
            |  || |||||||| ||||||||||| ||||||| ||| |||||
Sbjct: 537 tgtgtcgagaataccaatgatgtcatcttctttcaaaatgagatg 493



to top

>dbj|AK061837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D10, full
           insert sequence
          Length = 1008

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 408 agcctctgcaaccttgatcagaacccggtcattgagaggcttcatgtctttgacatcatc 467
           ||||||||||||||| || ||||| |||||||| || |||||||  ||||| ||||||||
Sbjct: 616 agcctctgcaaccttaatgagaacacggtcattcagtggcttcagatctttcacatcatc 557

                                                        
Query: 468 agattcaagaatacctatgatgtcatcctctttcataataagatg 512
            |  || |||||||| ||||||||||| ||||||| ||| |||||
Sbjct: 556 tgtgtcgagaataccaatgatgtcatcttctttcaaaatgagatg 512



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 84/99 (84%)
 Strand = Plus / Plus

                                                                            
Query: 179      cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 238
                ||||||| | ||||||||| | |||||| |||||| | |||||||||| |||||||||||
Sbjct: 33133527 cagccattagatctgacacccgcaacactatgtagctcgtgccatcagagcccttgaact 33133586

                                                       
Query: 239      cgccgcctgcgtacttggagtacagcacagtgctgcctg 277
                ||| ||| || || ||||| || || |||||||||||||
Sbjct: 33133587 cgctgccagcatatttggaatatagaacagtgctgcctg 33133625



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                            
Query: 442      agaggcttcatgtctttgacatcatcagattcaagaatacctatgatgtcatcctctttc 501
                |||||||||||||| ||  |||||||||  || |||||||| ||||||||||||||||| 
Sbjct: 33134019 agaggcttcatgtcctttgcatcatcagtctccagaataccaatgatgtcatcctcttta 33134078

                                 
Query: 502      ataataagatgcttgga 518
                | ||| ||||| |||||
Sbjct: 33134079 agaatcagatggttgga 33134095



to top

>dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1369_G08
          Length = 104190

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 84/99 (84%)
 Strand = Plus / Plus

                                                                         
Query: 179   cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 238
             ||||||| | ||||||||| | |||||| |||||| | |||||||||| |||||||||||
Sbjct: 49187 cagccattagatctgacacccgcaacactatgtagctcgtgccatcagagcccttgaact 49246

                                                    
Query: 239   cgccgcctgcgtacttggagtacagcacagtgctgcctg 277
             ||| ||| || || ||||| || || |||||||||||||
Sbjct: 49247 cgctgccagcatatttggaatatagaacagtgctgcctg 49285



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                         
Query: 442   agaggcttcatgtctttgacatcatcagattcaagaatacctatgatgtcatcctctttc 501
             |||||||||||||| ||  |||||||||  || |||||||| ||||||||||||||||| 
Sbjct: 49679 agaggcttcatgtcctttgcatcatcagtctccagaataccaatgatgtcatcctcttta 49738

                              
Query: 502   ataataagatgcttgga 518
             | ||| ||||| |||||
Sbjct: 49739 agaatcagatggttgga 49755



to top

>gb|BT018159.1| Zea mays clone EL01N0556C01.c mRNA sequence
          Length = 974

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 74/86 (86%)
 Strand = Plus / Minus

                                                                       
Query: 415 gcaaccttgatcagaacccggtcattgagaggcttcatgtctttgacatcatcagattca 474
           ||||||||||| ||||| ||||| || ||||||||||||||||| || ||||||| ||| 
Sbjct: 541 gcaaccttgattagaacacggtcgttcagaggcttcatgtctttcacgtcatcagtttct 482

                                     
Query: 475 agaatacctatgatgtcatcctcttt 500
           |  |||||||| | ||||||||||||
Sbjct: 481 aagatacctataacgtcatcctcttt 456



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 148/187 (79%)
 Strand = Plus / Minus

                                                                       
Query: 181 gccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaactcg 240
           ||||||| ||| ||| | |||| ||| |||||||| ||||| || |  ||||||||||| 
Sbjct: 775 gccatcatatccgacgccctcagcactatgtagttcgtgccgtctgcccccttgaactct 716

                                                                       
Query: 241 ccgcctgcgtacttggagtacagcacagtgctgcctggtgacaccgacagcggctgcctg 300
           | ||| ||||||||||||||||| ||| |||| || |  || |||||||||    |||| 
Sbjct: 715 ctgccggcgtacttggagtacaggacactgctccccgcggagaccgacagctcgagcctc 656

                                                                       
Query: 301 ttgccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggcttc 360
           | ||| |||||||| || | ||| || |||||  |||| || ||||| || |||||||||
Sbjct: 655 tcgccgtcctcgtccagggggcctgggccaacctctacgaccgttccgatagatggcttc 596

                  
Query: 361 tccttgg 367
           |||||||
Sbjct: 595 tccttgg 589



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                            
Query: 418      accttgatcagaacccggtcattgagaggcttcatgtctttgacatcatcagattcaaga 477
                ||||| || ||||| |||||||| || |||||||  ||||| |||||||| |  || |||
Sbjct: 16184429 accttaatgagaacacggtcattcagtggcttcagatctttcacatcatctgtgtcgaga 16184488

                                                   
Query: 478      atacctatgatgtcatcctctttcataataagatg 512
                ||||| ||||||||||| ||||||| ||| |||||
Sbjct: 16184489 ataccaatgatgtcatcttctttcaaaatgagatg 16184523



to top

>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1344_B01
          Length = 170912

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                        
Query: 418  accttgatcagaacccggtcattgagaggcttcatgtctttgacatcatcagattcaaga 477
            ||||| || ||||| |||||||| || |||||||  ||||| |||||||| |  || |||
Sbjct: 945  accttaatgagaacacggtcattcagtggcttcagatctttcacatcatctgtgtcgaga 1004

                                               
Query: 478  atacctatgatgtcatcctctttcataataagatg 512
            ||||| ||||||||||| ||||||| ||| |||||
Sbjct: 1005 ataccaatgatgtcatcttctttcaaaatgagatg 1039



to top

>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0556H01
          Length = 149800

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                         
Query: 418   accttgatcagaacccggtcattgagaggcttcatgtctttgacatcatcagattcaaga 477
             ||||| || ||||| |||||||| || |||||||  ||||| |||||||| |  || |||
Sbjct: 89030 accttaatgagaacacggtcattcagtggcttcagatctttcacatcatctgtgtcgaga 89089

                                                
Query: 478   atacctatgatgtcatcctctttcataataagatg 512
             ||||| ||||||||||| ||||||| ||| |||||
Sbjct: 89090 ataccaatgatgtcatcttctttcaaaatgagatg 89124



to top

>gb|AY109707.1| Zea mays CL21464_1 mRNA sequence
          Length = 907

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 415 gcaaccttgatcagaacccggtcattgagaggcttcatgtctttgacatcatcagattca 474
           |||||||| |||||||  || ||||| || || ||||| || || |||||||||   |||
Sbjct: 396 gcaaccttaatcagaatgcgatcattcagtggtttcatatccttcacatcatcactgtca 455

                                                 
Query: 475 agaatacctatgatgtcatcctctttcataataagatg 512
           |||||||| || |||||||| ||||||| ||| |||||
Sbjct: 456 agaataccaattatgtcatcttctttcaaaatgagatg 493



to top

>gb|M87646.1|SPICPN10X Spinach chaperonin 10 (CPN10) mRNA, complete cds
          Length = 881

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 169 taagagagctcagccatcacatctgacactctcaacacaatgtagt 214
           ||||| ||| ||||||||||||| || ||||||||||| |||||||
Sbjct: 815 taagaaagcacagccatcacatccgatactctcaacaccatgtagt 770



to top

>dbj|AP004472.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT17P02, TM0006,
             complete sequence
          Length = 72374

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 340   actgttccaatggatggcttctccttggttgtctcggtgag 380
             ||||||||||| ||||| ||||||||||||| ||| |||||
Sbjct: 62790 actgttccaatagatggtttctccttggttgcctccgtgag 62830



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                  
Query: 463   tcatcagattcaagaatacctatgatgtcatcctctttcataataagatgctt 515
             ||||||| |||||| ||||| | ||||||||| || ||||  |||||||||||
Sbjct: 63117 tcatcagtttcaaggataccaacgatgtcatcatccttcagtataagatgctt 63169



to top

>ref|NM_122079.3| Arabidopsis thaliana CPN20 (CHAPERONIN 20); calmodulin binding
           AT5G20720 (CPN20) transcript variant AT5G20720.2 mRNA,
           complete cds
          Length = 948

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 304 ccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggcttctcc 363
           ||||||||||| || || ||||| ||||| ||||  || || ||||| || |||||||| 
Sbjct: 692 ccttcctcgtctagggaacccggtccaactgctatcaccgtgccaatagaaggcttctct 633

                         
Query: 364 ttggttgtctcggt 377
           ||||| ||||||||
Sbjct: 632 ttggtagtctcggt 619



to top

>ref|NM_180714.1| Arabidopsis thaliana CPN20 (CHAPERONIN 20); calmodulin binding
           AT5G20720 (CPN20) transcript variant AT5G20720.1 mRNA,
           complete cds
          Length = 963

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 304 ccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggcttctcc 363
           ||||||||||| || || ||||| ||||| ||||  || || ||||| || |||||||| 
Sbjct: 707 ccttcctcgtctagggaacccggtccaactgctatcaccgtgccaatagaaggcttctct 648

                         
Query: 364 ttggttgtctcggt 377
           ||||| ||||||||
Sbjct: 647 ttggtagtctcggt 634



to top

>gb|AY062971.1| Arabidopsis thaliana putative chloroplast Cpn21 protein (At5g20720)
           mRNA, complete cds
          Length = 793

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 304 ccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggcttctcc 363
           ||||||||||| || || ||||| ||||| ||||  || || ||||| || |||||||| 
Sbjct: 626 ccttcctcgtctagggaacccggtccaactgctatcaccgtgccaatagaaggcttctct 567

                         
Query: 364 ttggttgtctcggt 377
           ||||| ||||||||
Sbjct: 566 ttggtagtctcggt 553



to top

>gb|AY034979.1| Arabidopsis thaliana putative chloroplast Cpn21 protein (At5g20720)
           mRNA, complete cds
          Length = 973

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 304 ccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggcttctcc 363
           ||||||||||| || || ||||| ||||| ||||  || || ||||| || |||||||| 
Sbjct: 707 ccttcctcgtctagggaacccggtccaactgctatcaccgtgccaatagaaggcttctct 648

                         
Query: 364 ttggttgtctcggt 377
           ||||| ||||||||
Sbjct: 647 ttggtagtctcggt 634



to top

>emb|AJ010818.1|ATH010818 Arabidopsis thaliana mRNA for chloroplast Cpn21 protein
          Length = 951

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 304 ccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggcttctcc 363
           ||||||||||| || || ||||| ||||| ||||  || || ||||| || |||||||| 
Sbjct: 677 ccttcctcgtctagggaacccggtccaactgctatcacggtgccaatagaaggcttctct 618

                         
Query: 364 ttggttgtctcggt 377
           ||||| ||||||||
Sbjct: 617 ttggtagtctcggt 604



to top

>gb|AF428366.1|AF428366 Arabidopsis thaliana AT5g20720/T1M15_120 mRNA, complete cds
          Length = 955

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 304 ccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggcttctcc 363
           ||||||||||| || || ||||| ||||| ||||  || || ||||| || |||||||| 
Sbjct: 703 ccttcctcgtctagggaacccggtccaactgctatcaccgtgccaatagaaggcttctct 644

                         
Query: 364 ttggttgtctcggt 377
           ||||| ||||||||
Sbjct: 643 ttggtagtctcggt 630



to top

>gb|AF428339.1|AF428339 Arabidopsis thaliana AT5g20720/T1M15_120 mRNA, complete cds
          Length = 959

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 304 ccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggcttctcc 363
           ||||||||||| || || ||||| ||||| ||||  || || ||||| || |||||||| 
Sbjct: 707 ccttcctcgtctagggaacccggtccaactgctatcaccgtgccaatagaaggcttctct 648

                         
Query: 364 ttggttgtctcggt 377
           ||||| ||||||||
Sbjct: 647 ttggtagtctcggt 634



to top

>gb|AF268068.1|AF268068 Arabidopsis thaliana chaperonin 10 (CHCPN10) mRNA, complete cds;
           chloroplast gene for chloroplast product
          Length = 903

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 304 ccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggcttctcc 363
           ||||||||||| || || ||||| ||||| ||||  || || ||||| || |||||||| 
Sbjct: 626 ccttcctcgtctagggaacccggtccaactgctatcacggtgccaatagaaggcttctct 567

                         
Query: 364 ttggttgtctcggt 377
           ||||| ||||||||
Sbjct: 566 ttggtagtctcggt 553



to top

>gb|BT004237.1| Arabidopsis thaliana clone RAFL14-89-L14 (R20431)
          Length = 2224

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 304 ccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggcttctcc 363
           ||||||||||| || || ||||| ||||| ||||  || || ||||| || |||||||| 
Sbjct: 154 ccttcctcgtctagggaacccggtccaactgctatcaccgtgccaatagaaggcttctct 213

                         
Query: 364 ttggttgtctcggt 377
           ||||| ||||||||
Sbjct: 214 ttggtagtctcggt 227



to top

>dbj|AB007130.1| Arabidopsis thaliana mRNA for chaperonin 20, complete cds
          Length = 919

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 304 ccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggcttctcc 363
           ||||||||||| || || ||||| ||||| ||||  || || ||||| || |||||||| 
Sbjct: 686 ccttcctcgtctagggaacccggtccaactgctatcaccgtgccaatagaaggcttctct 627

                         
Query: 364 ttggttgtctcggt 377
           ||||| ||||||||
Sbjct: 626 ttggtagtctcggt 613



to top

>gb|AF059037.1|AF059037 Arabidopsis thaliana chaperonin 10 (CPN10) mRNA, complete cds
          Length = 937

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 304 ccttcctcgtcgagtgagcccggaccaacagctacaactgttccaatggatggcttctcc 363
           ||||||||||| || || ||||| ||||| ||||  || || ||||| || |||||||| 
Sbjct: 678 ccttcctcgtctagggaacccggtccaactgctatcaccgtgccaatagaaggcttctct 619

                         
Query: 364 ttggttgtctcggt 377
           ||||| ||||||||
Sbjct: 618 ttggtagtctcggt 605



to top

>gb|AC165975.4| Mus musculus BAC clone RP23-3L23 from chromosome 5, complete sequence
          Length = 259091

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 144    gaaacaaagtaacaaactcca 164
              |||||||||||||||||||||
Sbjct: 106781 gaaacaaagtaacaaactcca 106801



to top

>gb|AY542873.2| Medicago truncatula calmodulin-like protein 2 (CAML2) and
            calmodulin-like protein 1 (CAML1) genes, complete cds
          Length = 7872

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 518  agttgttgtattcaaccctca 538
            |||||||||||||||||||||
Sbjct: 1484 agttgttgtattcaaccctca 1504



to top

>gb|AC102361.13| Mus musculus chromosome 18, clone RP23-37I2, complete sequence
          Length = 213628

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 473    caagaatacctatgatgtcat 493
              |||||||||||||||||||||
Sbjct: 107946 caagaatacctatgatgtcat 107926



to top

>gb|AY373585.1| Homo sapiens myeloid/lymphoid or mixed-lineage leukemia (trithorax
             homolog, Drosophila) (MLL) gene, complete cds
          Length = 89753

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 169   taagagagctcagccatcaca 189
             |||||||||||||||||||||
Sbjct: 87911 taagagagctcagccatcaca 87891



to top

>ref|NM_005933.2| Homo sapiens myeloid/lymphoid or mixed-lineage leukemia (trithorax
             homolog, Drosophila) (MLL), mRNA
          Length = 14982

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 169   taagagagctcagccatcaca 189
             |||||||||||||||||||||
Sbjct: 12071 taagagagctcagccatcaca 12051



to top

>emb|Z69780.1|HSALL1X37 H.sapiens ALL-1 gene exon 37
          Length = 4080

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 169 taagagagctcagccatcaca 189
           |||||||||||||||||||||
Sbjct: 444 taagagagctcagccatcaca 424



to top

>dbj|AP001267.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-770J1, complete
              sequence
          Length = 194310

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 169    taagagagctcagccatcaca 189
              |||||||||||||||||||||
Sbjct: 147748 taagagagctcagccatcaca 147728



to top

>dbj|D90041.1|HUMAACTA2 Homo sapiens mRNA for arylamine N-acetyltransferase, complete cds
          Length = 1319

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 205 acaatgtagttggtgccatca 225
           |||||||||||||||||||||
Sbjct: 508 acaatgtagttggtgccatca 488



to top

>dbj|AB209508.1| Homo sapiens mRNA for myeloid/lymphoid or mixed-lineage leukemia
            (trithorax homolog, Drosophila) variant protein
          Length = 11222

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 169  taagagagctcagccatcaca 189
            |||||||||||||||||||||
Sbjct: 9615 taagagagctcagccatcaca 9595



to top

>gb|L04731.1|HUMTRLALL1 Homo sapiens translocation T(4:11) of ALL-1 gene to chromosome 4
          Length = 14255

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 169   taagagagctcagccatcaca 189
             |||||||||||||||||||||
Sbjct: 11871 taagagagctcagccatcaca 11851



to top

>gb|AC149090.2| Mus musculus BAC clone RP24-130G10 from chromosome Y, complete sequence
          Length = 114452

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   aactgaaacaaagtaacaaa 159
             ||||||||||||||||||||
Sbjct: 38116 aactgaaacaaagtaacaaa 38097



to top

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 247     gcgtacttggagtacagcac 266
               ||||||||||||||||||||
Sbjct: 4522058 gcgtacttggagtacagcac 4522077



to top

>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence,
             complete sequence
          Length = 140064

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   tgaaacaaagtaacaaactc 162
             ||||||||||||||||||||
Sbjct: 79459 tgaaacaaagtaacaaactc 79440



to top

>gb|AC116180.4| Mus musculus BAC clone RP24-167M11 from chromosome 9, complete sequence
          Length = 149442

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     taaacaaattcgtaaatgtt 29
              ||||||||||||||||||||
Sbjct: 122125 taaacaaattcgtaaatgtt 122144



to top

>emb|AL356234.18| Human DNA sequence from clone RP11-95M15 on chromosome 6 Contains a
             novel gene and a protein tyrosine phosphatase non-receptor
             type 11 (Nooan syndrome) (PTPN11) pseudogene, complete
             sequence
          Length = 115224

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   tgaactcaaaactgaaacaa 150
             ||||||||||||||||||||
Sbjct: 55373 tgaactcaaaactgaaacaa 55392



to top

>gb|AC132516.4| Homo sapiens 3 BAC RP11-264A3 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 66262

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 392  cttcagtcttgtctgaagcc 411
            ||||||||||||||||||||
Sbjct: 8986 cttcagtcttgtctgaagcc 8967



to top

>gb|AC116301.8| Homo sapiens 3 BAC RP11-625D20 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 62190

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 392  cttcagtcttgtctgaagcc 411
            ||||||||||||||||||||
Sbjct: 4915 cttcagtcttgtctgaagcc 4896



to top

>ref|NM_001031051.1| Gallus gallus similar to hypothetical protein MGC29875; novel
            putative protein similar to YIL091C yeast hypothetical 84
            kD protein from SGA1-KTR7 (LOC421384), mRNA
          Length = 2980

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 248  cgtacttggagtacagcacagtgc 271
            ||||||||||||| ||||||||||
Sbjct: 2239 cgtacttggagtagagcacagtgc 2216



to top

>emb|AL671968.17| Mouse DNA sequence from clone RP23-191E3 on chromosome 11 Contains four
             novel genes, an eukaryotic translation elongation factor 2
             (Eef2) pseudogene, a Finkel-Biskis-Reilly murine sarcoma
             virus (FBR-MuSV) ubiquitously expressed (Fau) pseudogene,
             the Eif4enif1 gene for eukaryotic translation initiation
             factor 4E nuclear import factor 1, the  Drg1 gene for
             developmentally regulated GTP binding protein 1, the
             Zfp278 gene for zinc finger protein 278, the 3' end of the
             Limk2 gene LIM motif-containing protein kinase 2 and five
             CpG islands, complete sequence
          Length = 214546

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   aactgaaacaaagtaacaaa 159
             ||||||||||||||||||||
Sbjct: 12499 aactgaaacaaagtaacaaa 12518



to top

>emb|AJ719771.1| Gallus gallus mRNA for hypothetical protein, clone 6f17
          Length = 2980

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 248  cgtacttggagtacagcacagtgc 271
            ||||||||||||| ||||||||||
Sbjct: 2239 cgtacttggagtagagcacagtgc 2216



to top

>gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H14 map mi148, complete
             sequence
          Length = 129667

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 456   tttgacatcatcagattcaa 475
             ||||||||||||||||||||
Sbjct: 91349 tttgacatcatcagattcaa 91368



to top

>gb|AC087774.27| Homo sapiens 12p BAC RP11-633O13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 184000

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 445    ggcttcatgtctttgacatc 464
              ||||||||||||||||||||
Sbjct: 128773 ggcttcatgtctttgacatc 128792



to top

>gb|AC097462.2| Homo sapiens BAC clone RP11-18O11 from 4, complete sequence
          Length = 180973

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 477   aatacctatgatgtcatcct 496
             ||||||||||||||||||||
Sbjct: 49743 aatacctatgatgtcatcct 49762



to top

>gb|AC147984.3| Mus musculus BAC clone RP24-402A9 from chromosome y, complete sequence
          Length = 164496

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    aactgaaacaaagtaacaaa 159
              ||||||||||||||||||||
Sbjct: 134284 aactgaaacaaagtaacaaa 134303



to top

>ref|XM_573464.1| PREDICTED: Rattus norvegicus similar to complement factor H-related
            protein (LOC498241), mRNA
          Length = 2715

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 59   aattctataaccatctgaaa 78
            ||||||||||||||||||||
Sbjct: 2689 aattctataaccatctgaaa 2670



to top

>gb|AF436847.2| Rattus norvegicus complement factor H-related protein mRNA, complete
            cds
          Length = 2729

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 59   aattctataaccatctgaaa 78
            ||||||||||||||||||||
Sbjct: 2689 aattctataaccatctgaaa 2670



to top

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 247     gcgtacttggagtacagcac 266
               ||||||||||||||||||||
Sbjct: 4418997 gcgtacttggagtacagcac 4418978



to top

>gb|AF233745.1|AF233745 Lycopersicon esculentum chaperonin 21 precursor, mRNA, complete
           cds; nuclear gene for chloroplast product
          Length = 1102

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 83/104 (79%)
 Strand = Plus / Minus

                                                                       
Query: 412 tctgcaaccttgatcagaacccggtcattgagaggcttcatgtctttgacatcatcagat 471
           |||||||||||||| || || | |||||| |  |||| ||  || ||||||||||| |  
Sbjct: 589 tctgcaaccttgattaggactctgtcatttaatggctgcagatccttgacatcatctgtc 530

                                                       
Query: 472 tcaagaatacctatgatgtcatcctctttcataataagatgctt 515
           ||||||||||| |  || ||||||||||||| ||| || |||||
Sbjct: 529 tcaagaataccaacaatatcatcctctttcagaatgaggtgctt 486



to top

>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome
          Length = 1751377

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 98      cagcaatctcacccctgatg 117
               ||||||||||||||||||||
Sbjct: 1740200 cagcaatctcacccctgatg 1740181



to top

>gb|AC147631.3| Mus musculus BAC clone RP23-341H6 from 9, complete sequence
          Length = 169769

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     taaacaaattcgtaaatgtt 29
              ||||||||||||||||||||
Sbjct: 144482 taaacaaattcgtaaatgtt 144463



to top

>emb|AL672147.10| Mouse DNA sequence from clone RP23-434N14 on chromosome X, complete
              sequence
          Length = 192252

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    aaacaaagtaacaaactcca 164
              ||||||||||||||||||||
Sbjct: 154398 aaacaaagtaacaaactcca 154417



to top

>emb|AL732525.13| Mouse DNA sequence from clone RP23-358I10 on chromosome 2, complete
             sequence
          Length = 220495

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 194   acactctcaacacaatgtagttgg 217
             |||||||||||||| |||||||||
Sbjct: 96313 acactctcaacacagtgtagttgg 96336


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,733,528
Number of Sequences: 3902068
Number of extensions: 4733528
Number of successful extensions: 91476
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 91183
Number of HSP's gapped (non-prelim): 284
length of query: 545
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 522
effective length of database: 17,143,297,704
effective search space: 8948801401488
effective search space used: 8948801401488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top