>gb|AC127314.4| Mus musculus BAC clone RP23-217N4 from chromosome 18, complete sequence
          Length = 232320

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     tttccccaggtgatggagaa 52
              ||||||||||||||||||||
Sbjct: 212271 tttccccaggtgatggagaa 212290

>gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosome 18, complete sequence
          Length = 208462

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     tttccccaggtgatggagaa 52
              ||||||||||||||||||||
Sbjct: 135616 tttccccaggtgatggagaa 135597

>ref|XM_586655.2| PREDICTED: Bos taurus similar to calpain 6 (LOC539360), mRNA
          Length = 2313

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 6   gaaatccacaatgatatca 24
           |||||||||||||||||||
Sbjct: 724 gaaatccacaatgatatca 706

>gb|AC110569.8| Mus musculus chromosome 15, clone RP23-309J17, complete sequence
          Length = 213398

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 35    tccccaggtgatggagaac 53
             |||||||||||||||||||
Sbjct: 47207 tccccaggtgatggagaac 47225

>ref|XM_711616.1| Candida albicans SC5314 putative vacuolar protein sorting protein
            (CaO19_3399), mRNA
          Length = 2295

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 17   tgatatcatacagattttt 35
            |||||||||||||||||||
Sbjct: 2082 tgatatcatacagattttt 2064

>ref|XM_711556.1| Candida albicans SC5314 putative vacuolar protein sorting protein
            (CaO19_10902), mRNA
          Length = 2295

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 17   tgatatcatacagattttt 35
            |||||||||||||||||||
Sbjct: 2082 tgatatcatacagattttt 2064

>gb|AC073939.6| Mus musculus strain C57BL/6J chromosome 12 clone RP23-218B2, complete
             sequence
          Length = 195281

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    tatcatacagatttttccc 38
             |||||||||||||||||||
Sbjct: 10298 tatcatacagatttttccc 10316

>emb|AL033391.1|CAC20C1 C.albicans cosmid Ca20C1
          Length = 37968

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 17   tgatatcatacagattttt 35
            |||||||||||||||||||
Sbjct: 7122 tgatatcatacagattttt 7140

>gb|AC012470.16| Homo sapiens chromosome 10 clone RP11-506P9, complete sequence
          Length = 122543

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    aatgatatcatacagattt 33
             |||||||||||||||||||
Sbjct: 34577 aatgatatcatacagattt 34559

>gb|AC122686.6| Homo sapiens 12 BAC RP11-295J2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 121995

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 15    aatgatatcatacagatttttcc 37
             |||||||||||||| ||||||||
Sbjct: 66272 aatgatatcatacacatttttcc 66250

>emb|AL929596.11| Zebrafish DNA sequence from clone DKEY-53H9, complete sequence
          Length = 191874

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 43     tgatggagaactgccatcg 61
              |||||||||||||||||||
Sbjct: 189961 tgatggagaactgccatcg 189979

>emb|BX088601.12| Zebrafish DNA sequence from clone DKEY-221L8, complete sequence
          Length = 33467

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 43  tgatggagaactgccatcg 61
           |||||||||||||||||||
Sbjct: 87  tgatggagaactgccatcg 105

>gb|AC016968.24| Homo sapiens 3 BAC RP11-59J16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 152586

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 28    agatttttccccaggtgatggag 50
             |||||||||||||||||| ||||
Sbjct: 27483 agatttttccccaggtgagggag 27461

>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region
              locus, strain C57BL/6
          Length = 2500000

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     tatcatacagatttttccc 38
              |||||||||||||||||||
Sbjct: 420121 tatcatacagatttttccc 420139

>gb|AC163348.5| Mus musculus BAC clone RP23-230L2 from chromosome 12, complete sequence
          Length = 233932

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     tatcatacagatttttccc 38
              |||||||||||||||||||
Sbjct: 122133 tatcatacagatttttccc 122151

>emb|BX248414.5| Zebrafish DNA sequence from clone CH211-236E8, complete sequence
          Length = 149603

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     aaatccacaatgatatcat 25
             |||||||||||||||||||
Sbjct: 59983 aaatccacaatgatatcat 59965


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 850,636
Number of Sequences: 3902068
Number of extensions: 850636
Number of successful extensions: 83877
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83808
Number of HSP's gapped (non-prelim): 69
length of query: 96
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 75
effective length of database: 17,151,101,840
effective search space: 1286332638000
effective search space used: 1286332638000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)