ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags4k15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BC044308.1| Xenopus laevis, clone IMAGE:4930487, mRNA Length = 1459 Score = 252 bits (127), Expect = 4e-64 Identities = 132/134 (98%) Strand = Plus / Minus Query: 1 tctggtaacaaggtccaaattacactagcaaccatgaattgattgatttgaataagactg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1348 tctggtaacaaggtccaaattacactagcaaccatgaattgattgatttgaataagactg 1289 Query: 61 gaatatgaataggaaaggcctgaatagaaggatcagtactaaaaacttacantaaatgtg 120 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 1288 gaatatgaataggaaaggcctgaatagaaggatcagtaataaaaacttacaataaatgtg 1229 Query: 121 tagccttagagcat 134 |||||||||||||| Sbjct: 1228 tagccttagagcat 1215 Score = 61.9 bits (31), Expect = 7e-07 Identities = 31/31 (100%) Strand = Plus / Minus Query: 159 agaagggagtcaagtcagcaacacccatttg 189 ||||||||||||||||||||||||||||||| Sbjct: 1200 agaagggagtcaagtcagcaacacccatttg 1170
>gb|BC076639.1| Xenopus laevis vacuolar protein sorting 26 (yeast), mRNA (cDNA clone MGC:78764 IMAGE:3397605), complete cds Length = 2258 Score = 79.8 bits (40), Expect = 3e-12 Identities = 79/90 (87%), Gaps = 3/90 (3%) Strand = Plus / Minus Query: 42 attgatttgaataaga--ctggaatatgaataggaaagg-cctgaatagaaggatcagta 98 |||||||||||||||| | ||||||||||||||| ||| |||||||||||||||||||| Sbjct: 1519 attgatttgaataagagacaggaatatgaataggagagggcctgaatagaaggatcagta 1460 Query: 99 ctaaaaacttacantaaatgtgtagcctta 128 |||||| | ||| || || |||||||||| Sbjct: 1459 ataaaaagtaacaatacatttgtagcctta 1430
>gb|BC099063.1| Xenopus laevis cDNA clone IMAGE:6868263 Length = 2062 Score = 79.8 bits (40), Expect = 3e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 42 attgatttgaataagactggaatatgaataggaaaggcctgaatagaaggatcagtacta 101 |||||||||||||||||| ||||||||||||| |||||||||||||| ||| |||| || Sbjct: 840 attgatttgaataagactaaaatatgaataggagaggcctgaatagaaagatgagtaata 899 Query: 102 aaaa 105 |||| Sbjct: 900 aaaa 903
>gb|BC077630.1| Xenopus laevis cDNA clone IMAGE:6957693, partial cds Length = 837 Score = 77.8 bits (39), Expect = 1e-11 Identities = 100/118 (84%), Gaps = 7/118 (5%) Strand = Plus / Plus Query: 14 tccaaattacactagcaaccatgaattgattgatttgaataa--gactggaatatgaata 71 |||||||||| |||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 705 tccaaattaccctagcaaccatg----cattgatttgaataagcgactggaatatgaata 760 Query: 72 ggaaag-gcctgaatagaaggatcagtactaaaaacttacantaaatgtgtagcctta 128 || || |||||||||||||||||| | ||| || | ||| |||||||||||||||| Sbjct: 761 agagagaccctgaatagaaggatcaggaataataagtaacaataaatgtgtagcctta 818
>gb|BC084934.1| Xenopus laevis ectonucleoside triphosphate diphosphohydrolase 4, mRNA (cDNA clone MGC:81664 IMAGE:6864529), complete cds Length = 3667 Score = 77.8 bits (39), Expect = 1e-11 Identities = 65/74 (87%) Strand = Plus / Minus Query: 55 agactggaatatgaataggaaaggcctgaatagaaggatcagtactaaaaacttacanta 114 |||||||||||||||||||| |||||||||||||| ||| |||| | |||| | ||| || Sbjct: 2789 agactggaatatgaataggagaggcctgaatagaaagatgagtaatgaaaattaacaata 2730 Query: 115 aatgtgtagcctta 128 ||||||||||||| Sbjct: 2729 catgtgtagcctta 2716
>gb|BC046749.1| Xenopus laevis, Similar to ribosomal protein L34, clone IMAGE:5570019, mRNA Length = 2313 Score = 77.8 bits (39), Expect = 1e-11 Identities = 100/118 (84%), Gaps = 7/118 (5%) Strand = Plus / Plus Query: 14 tccaaattacactagcaaccatgaattgattgatttgaataa--gactggaatatgaata 71 |||||||||| |||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 706 tccaaattaccctagcaaccatg----cattgatttgaataagcgactggaatatgaata 761 Query: 72 ggaaag-gcctgaatagaaggatcagtactaaaaacttacantaaatgtgtagcctta 128 || || |||||||||||||||||| | ||| || | ||| |||||||||||||||| Sbjct: 762 agagagaccctgaatagaaggatcaggaataataagtaacaataaatgtgtagcctta 819
>gb|BC091639.1| Xenopus laevis cDNA clone MGC:99251 IMAGE:7210206, complete cds Length = 2016 Score = 77.8 bits (39), Expect = 1e-11 Identities = 60/66 (90%), Gaps = 2/66 (3%) Strand = Plus / Minus Query: 42 attgatttgaataaga--ctggaatatgaataggaaaggcctgaatagaaggatcagtac 99 |||||||||||||||| ||||||||||||||||| |||||||||||||| ||| |||| Sbjct: 1672 attgatttgaataagagactggaatatgaataggagaggcctgaatagaaagatgagtaa 1613 Query: 100 taaaaa 105 |||||| Sbjct: 1612 taaaaa 1607
>gb|BC073627.1| Xenopus laevis hypothetical protein LOC443678, mRNA (cDNA clone IMAGE:5514810), partial cds Length = 3418 Score = 75.8 bits (38), Expect = 5e-11 Identities = 79/90 (87%), Gaps = 7/90 (7%) Strand = Plus / Minus Query: 12 ggtccaaattacactagcaaccatgaattgattgatttgaata--agactggaatatgaa 69 |||||||||||| |||||||||||| | ||||||||||| ||||||||||||||| Sbjct: 2904 ggtccaaattaccctagcaaccatg----cactgatttgaataagagactggaatatgaa 2849 Query: 70 taggaaa-ggcctgaatagaaggatcagta 98 ||||||| |||||||||||||| ||||||| Sbjct: 2848 taggaaagggcctgaatagaagcatcagta 2819
>gb|BC072080.1| Xenopus laevis MGC78980 protein, mRNA (cDNA clone MGC:78980 IMAGE:4405430), complete cds Length = 2624 Score = 75.8 bits (38), Expect = 5e-11 Identities = 44/46 (95%) Strand = Plus / Minus Query: 44 tgatttgaataagactggaatatgaataggaaaggcctgaatagaa 89 |||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 1617 tgatatgaataagactggaatatgaataggagaggcctgaatagaa 1572
>gb|BC074130.1| Xenopus laevis MGC81839 protein, mRNA (cDNA clone MGC:81839 IMAGE:7008205), complete cds Length = 2656 Score = 71.9 bits (36), Expect = 7e-10 Identities = 70/80 (87%), Gaps = 6/80 (7%) Strand = Plus / Minus Query: 12 ggtccaaattacactagcaaccatgaattgattgatttgaata--agactggaatatgaa 69 |||||||||| | |||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 1736 ggtccaaattcctctagcaaccatg----cattgatttgaataagagactggaatatgaa 1681 Query: 70 taggaaaggcctgaatagaa 89 ||||| |||||||||||||| Sbjct: 1680 taggagaggcctgaatagaa 1661
>gb|BC056026.1| Xenopus laevis mitogen-activated protein kinase kinase 1 interacting protein 1, mRNA (cDNA clone MGC:68959 IMAGE:4959416), complete cds Length = 1993 Score = 71.9 bits (36), Expect = 7e-10 Identities = 82/96 (85%), Gaps = 6/96 (6%) Strand = Plus / Minus Query: 12 ggtccaaattacactagcaaccatgaattgattgatttgaataag--actggaatatgaa 69 |||||||||| | |||||||||||| ||||||||||||||| || |||||||||| Sbjct: 1176 ggtccaaattcccctagcaaccatg----cattgatttgaataagaaacaggaatatgaa 1121 Query: 70 taggaaaggcctgaatagaaggatcagtactaaaaa 105 ||||| |||||||||||||| ||| |||| |||||| Sbjct: 1120 taggagaggcctgaatagaaagatgagtaataaaaa 1085
>gb|BC094151.1| Xenopus laevis hypothetical protein LOC443678, mRNA (cDNA clone MGC:115090 IMAGE:6639985), complete cds Length = 2928 Score = 71.9 bits (36), Expect = 7e-10 Identities = 42/44 (95%) Strand = Plus / Minus Query: 55 agactggaatatgaataggaaaggcctgaatagaaggatcagta 98 ||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 2907 agactggaatatgaataggaagggcctgaatagaagcatcagta 2864
>gb|BC084846.1| Xenopus laevis hypothetical LOC495378, mRNA (cDNA clone MGC:85447 IMAGE:6936112), complete cds Length = 1667 Score = 71.9 bits (36), Expect = 7e-10 Identities = 70/80 (87%), Gaps = 6/80 (7%) Strand = Plus / Plus Query: 12 ggtccaaattacactagcaaccatgaattgattgatttgaataaga--ctggaatatgaa 69 |||||||||| | |||||| ||||||||||||| ||||||||| |||||||||||| Sbjct: 1430 ggtccaaattcccctagcagccatgaattgatt----tgaataagagactggaatatgaa 1485 Query: 70 taggaaaggcctgaatagaa 89 ||||| |||||||||||||| Sbjct: 1486 taggagaggcctgaatagaa 1505
>gb|BC077615.1| Xenopus laevis MGC84611 protein, mRNA (cDNA clone MGC:84611 IMAGE:6641897), complete cds Length = 2181 Score = 69.9 bits (35), Expect = 3e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 55 agactggaatatgaataggaaaggcctgaatagaaggatcagtactaaaaa 105 |||||||||||||||||||| |||||||||||||| ||| |||| |||||| Sbjct: 1832 agactggaatatgaataggagaggcctgaatagaaagatgagtaataaaaa 1782
>gb|BC078028.1| Xenopus laevis MGC82733 protein, mRNA (cDNA clone MGC:82733 IMAGE:5155768), complete cds Length = 2035 Score = 69.9 bits (35), Expect = 3e-09 Identities = 84/97 (86%), Gaps = 5/97 (5%) Strand = Plus / Plus Query: 12 ggtccaaattacactagcaaccatgaattga-ttgatttgaata--agactggaatatga 68 |||||||||||| | |||||| ||| ||||| |||| |||||| |||||||||||||| Sbjct: 993 ggtccaaattacgcaagcaacaatgcattgatttga--tgaataagagactggaatatga 1050 Query: 69 ataggaaaggcctgaatagaaggatcagtactaaaaa 105 |||||| |||||||||||||| ||| |||| |||||| Sbjct: 1051 ataggagaggcctgaatagaaagatgagtaataaaaa 1087
>gb|BC079735.1| Xenopus laevis MGC84006 protein, mRNA (cDNA clone MGC:84006 IMAGE:6946413), complete cds Length = 4648 Score = 69.9 bits (35), Expect = 3e-09 Identities = 47/50 (94%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 42 attgatttgaataaga--ctggaatatgaataggaaaggcctgaatagaa 89 |||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 4005 attgatttgaataagagactggaatatgaataggagaggcctgaatagaa 3956 Score = 56.0 bits (28), Expect = 4e-05 Identities = 68/80 (85%), Gaps = 6/80 (7%) Strand = Plus / Minus Query: 12 ggtccaaattacactagcaaccatgaattgattgatttgaata--agactggaatatgaa 69 |||||| ||||| |||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 2967 ggtccacattaccctagcaaccatg----cattgatttgaataagagactggaatatgaa 2912 Query: 70 taggaaaggcctgaatagaa 89 |||| ||||||||| |||| Sbjct: 2911 taggggaggcctgaacagaa 2892
>gb|BC080015.1| Xenopus laevis MGC82115 protein, mRNA (cDNA clone MGC:82115 IMAGE:7011935), complete cds Length = 2526 Score = 69.9 bits (35), Expect = 3e-09 Identities = 47/50 (94%), Gaps = 2/50 (4%) Strand = Plus / Plus Query: 42 attgatttgaataaga--ctggaatatgaataggaaaggcctgaatagaa 89 |||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 2370 attgatttgaataagagactggaatatgaataggagaggcctgaatagaa 2419
>gb|BC072928.1| Xenopus laevis cDNA clone MGC:80440 IMAGE:5155640, complete cds Length = 6060 Score = 69.9 bits (35), Expect = 3e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 55 agactggaatatgaataggaaaggcctgaatagaaggatcagtactaaaaa 105 |||||||||||||||||||| |||||||||||||| ||| |||| |||||| Sbjct: 3008 agactggaatatgaataggagaggcctgaatagaaagatgagtaataaaaa 2958
>gb|BC046703.1| Xenopus laevis epithelial membrane protein 3, mRNA (cDNA clone MGC:53217 IMAGE:5543313), complete cds Length = 2402 Score = 69.9 bits (35), Expect = 3e-09 Identities = 78/91 (85%), Gaps = 6/91 (6%) Strand = Plus / Minus Query: 10 aaggtccaaattacactagcaaccatgaattgattgatttgaataaga--ctggaatatg 67 |||||||||||| | |||||||||||| |||||| ||||||||| |||||||||| Sbjct: 2289 aaggtccaaattcccctagcaaccatgcattgatg----tgaataagagactggaatatg 2234 Query: 68 aataggaaaggcctgaatagaaggatcagta 98 ||||||| |||||||||||||| ||| |||| Sbjct: 2233 aataggagaggcctgaatagaaagatgagta 2203
>emb|X83673.1|XLSSB1 X.laevis SSB1 gene Length = 11311 Score = 69.9 bits (35), Expect = 3e-09 Identities = 64/74 (86%) Strand = Plus / Plus Query: 55 agactggaatatgaataggaaaggcctgaatagaaggatcagtactaaaaacttacanta 114 |||||||||||||||||||| |||||||||||||| || |||| |||||| | ||| || Sbjct: 6251 agactggaatatgaataggagaggcctgaatagaaagaggagtaataaaaagtaacaata 6310 Query: 115 aatgtgtagcctta 128 || |||||||||| Sbjct: 6311 tatttgtagcctta 6324 Score = 61.9 bits (31), Expect = 7e-07 Identities = 34/35 (97%) Strand = Plus / Plus Query: 55 agactggaatatgaataggaaaggcctgaatagaa 89 |||||||||||||||||||| |||||||||||||| Sbjct: 7227 agactggaatatgaataggagaggcctgaatagaa 7261 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/58 (89%), Gaps = 2/58 (3%) Strand = Plus / Plus Query: 44 tgatttgaataaga--ctggaatatgaataggaaaggcctgaatagaaggatcagtac 99 |||||||||||||| ||||||||||||||||| ||| |||||||||| ||| ||||| Sbjct: 4769 tgatttgaataagagactggaatatgaataggagaggtctgaatagaaagataagtac 4826 Score = 48.1 bits (24), Expect = 0.011 Identities = 33/35 (94%), Gaps = 2/35 (5%) Strand = Plus / Plus Query: 42 attgatttgaataaga--ctggaatatgaatagga 74 |||||||||||||||| ||||||||||||||||| Sbjct: 5728 attgatttgaataagagactggaatatgaatagga 5762 Score = 44.1 bits (22), Expect = 0.17 Identities = 40/46 (86%) Strand = Plus / Plus Query: 44 tgatttgaataagactggaatatgaataggaaaggcctgaatagaa 89 |||| ||||||||| |||||| ||||||| |||||||||||||| Sbjct: 7693 tgatatgaataagagacgaatataaataggagaggcctgaatagaa 7738
>gb|BC079727.1| Xenopus laevis MGC83427 protein, mRNA (cDNA clone MGC:83427 IMAGE:7009054), complete cds Length = 4405 Score = 67.9 bits (34), Expect = 1e-08 Identities = 52/57 (91%), Gaps = 2/57 (3%) Strand = Plus / Plus Query: 44 tgatttgaataaga--ctggaatatgaataggaaaggcctgaatagaaggatcagta 98 |||||||||||||| |||||||||||||||| ||||||||||||||| ||| |||| Sbjct: 1649 tgatttgaataagagactggaatatgaataggtaaggcctgaatagaaagatgagta 1705
>gb|BC071133.1| Xenopus laevis MGC82186 protein, mRNA (cDNA clone MGC:82186 IMAGE:3400193), complete cds Length = 1261 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 56 gactggaatatgaataggaaaggcctgaatagaaggatcagtactaaaaa 105 ||||| ||||||||||||| ||| ||||||||||||||||||| |||||| Sbjct: 1100 gactgtaatatgaataggacagggctgaatagaaggatcagtaataaaaa 1051
>gb|BC059343.1| Xenopus laevis hypothetical protein MGC69155, mRNA (cDNA clone MGC:69155 IMAGE:5048767), complete cds Length = 2807 Score = 67.9 bits (34), Expect = 1e-08 Identities = 71/82 (86%), Gaps = 6/82 (7%) Strand = Plus / Plus Query: 10 aaggtccaaattacactagcaaccatgaattgattgatttgaata--agactggaatatg 67 |||||||||||| | |||||||||||| | ||||||||||| ||||||||||||| Sbjct: 1921 aaggtccaaattcccctagcaaccatg----cactgatttgaataagagactggaatatg 1976 Query: 68 aataggaaaggcctgaatagaa 89 ||||||| |||||||||||||| Sbjct: 1977 aataggagaggcctgaatagaa 1998 Score = 65.9 bits (33), Expect = 5e-08 Identities = 45/48 (93%), Gaps = 2/48 (4%) Strand = Plus / Plus Query: 44 tgatttgaataaga--ctggaatatgaataggaaaggcctgaatagaa 89 |||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1741 tgatttgaataagagactggaatatgaataggagaggcctgaatagaa 1788 Score = 63.9 bits (32), Expect = 2e-07 Identities = 44/47 (93%), Gaps = 2/47 (4%) Strand = Plus / Plus Query: 44 tgatttgaataaga--ctggaatatgaataggaaaggcctgaataga 88 |||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 1841 tgatttgaataagagactggaatatgaataggagaggcctgaataga 1887
>dbj|AB191036.1| Xenopus laevis gene for tudor repeat protein Xtr, partial cds Length = 17591 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 44 tgatttgaataagactggaatatgaataggaaaggcctgaatagaa 89 |||||||||| |||||||||||||||||||| ||| |||||||||| Sbjct: 5884 tgatttgaatgagactggaatatgaataggagaggtctgaatagaa 5929
>gb|BC072243.1| Xenopus laevis hypothetical protein LOC432289, mRNA (cDNA clone IMAGE:4032597), partial cds Length = 2704 Score = 65.9 bits (33), Expect = 5e-08 Identities = 45/48 (93%), Gaps = 2/48 (4%) Strand = Plus / Minus Query: 44 tgatttgaataaga--ctggaatatgaataggaaaggcctgaatagaa 89 |||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1892 tgatttgaataagagactggaatatgaataggagaggcctgaatagaa 1845
>dbj|AB176536.1| Xenopus laevis X-TSK-B1 mRNA for Tsukushi-B1, complete cds Length = 3586 Score = 65.9 bits (33), Expect = 5e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 55 agactggaatatgaataggaaaggcctgaatagaaggatcagtactaaa 103 |||||||||||||||||||| |||||||||||||| ||| |||| |||| Sbjct: 2477 agactggaatatgaataggagaggcctgaatagaaagatgagtaataaa 2525
>gb|BC072330.1| Xenopus laevis hypothetical protein MGC83150, mRNA (cDNA clone MGC:83150 IMAGE:6319137), complete cds Length = 2023 Score = 63.9 bits (32), Expect = 2e-07 Identities = 65/75 (86%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 55 agactggaatatgaataggaaagg-cctgaatagaaggatcagtactaaaaacttacant 113 |||||| || |||||||||| ||| ||||||||||| ||| |||| |||||| | ||| | Sbjct: 1786 agactgaaaaatgaataggagagggcctgaatagaacgatgagtaataaaaagtaacaat 1727 Query: 114 aaatgtgtagcctta 128 ||||||||||||||| Sbjct: 1726 aaatgtgtagcctta 1712
>gb|BC045262.1| Xenopus laevis homer homolog 3 (Drosophila), mRNA (cDNA clone MGC:52703 IMAGE:4682727), complete cds Length = 5806 Score = 63.9 bits (32), Expect = 2e-07 Identities = 47/51 (92%), Gaps = 2/51 (3%) Strand = Plus / Minus Query: 45 gatttgaata--agactggaatatgaataggaaaggcctgaatagaaggat 93 |||||||||| |||||||||||||||||||| | |||||||||||||||| Sbjct: 3251 gatttgaataggagactggaatatgaataggagatgcctgaatagaaggat 3201
>emb|Z54313.1|XBU715KB X.borealis U7 snRNA genes Length = 14186 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 54 aagactggaatatgaataggaaaggcctgaatagaa 89 ||||||||||||||||||||| |||||||||||||| Sbjct: 3689 aagactggaatatgaataggagaggcctgaatagaa 3724
>gb|BC084363.1| Xenopus laevis hypothetical LOC495157, mRNA (cDNA clone MGC:84771 IMAGE:6950926), complete cds Length = 2133 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 54 aagactggaatatgaataggaaaggcctgaatagaa 89 ||||||||||||||||||||| |||||||||||||| Sbjct: 1284 aagactggaatatgaataggagaggcctgaatagaa 1249
>gb|BC108461.1| Xenopus laevis MGC78980 protein, mRNA (cDNA clone MGC:130735 IMAGE:7973992), complete cds Length = 1788 Score = 63.9 bits (32), Expect = 2e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 44 tgatttgaataagactggaatatgaataggaaaggcctgaatagaaggatcagtactaaa 103 |||||||||| ||||||| |||||||||||| ||||| |||||||| ||| |||| |||| Sbjct: 1632 tgatttgaatgagactgggatatgaataggagaggccggaatagaaagatgagtaataaa 1573
>gb|BC073512.1| Xenopus laevis hypothetical protein LOC443654, mRNA (cDNA clone IMAGE:5155631), partial cds Length = 4319 Score = 61.9 bits (31), Expect = 7e-07 Identities = 46/51 (90%) Strand = Plus / Minus Query: 55 agactggaatatgaataggaaaggcctgaatagaaggatcagtactaaaaa 105 |||||||||||| ||||||| |||||||||||||| ||| |||| |||||| Sbjct: 4251 agactggaatataaataggagaggcctgaatagaaagataagtaataaaaa 4201
>gb|BC054249.1| Xenopus laevis golgi SNAP receptor complex member 2, mRNA (cDNA clone MGC:64459 IMAGE:6880776), complete cds Length = 1762 Score = 61.9 bits (31), Expect = 7e-07 Identities = 46/50 (92%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 42 attgatttgaataaga--ctggaatatgaataggaaaggcctgaatagaa 89 |||||||||||||||| ||||||||||||||||| ||||||||| |||| Sbjct: 1464 attgatttgaataagagactggaatatgaataggagaggcctgaaaagaa 1415
>gb|BC044118.1| Xenopus laevis glutamate rich WD repeat protein GRWD, mRNA (cDNA clone MGC:53574 IMAGE:4682552), complete cds Length = 3620 Score = 61.9 bits (31), Expect = 7e-07 Identities = 34/35 (97%) Strand = Plus / Plus Query: 55 agactggaatatgaataggaaaggcctgaatagaa 89 |||||||||||||||||||| |||||||||||||| Sbjct: 2038 agactggaatatgaataggagaggcctgaatagaa 2072
>gb|BC044986.1| Xenopus laevis endosulfine alpha, mRNA (cDNA clone MGC:52999 IMAGE:5536925), complete cds Length = 2262 Score = 61.9 bits (31), Expect = 7e-07 Identities = 34/35 (97%) Strand = Plus / Minus Query: 55 agactggaatatgaataggaaaggcctgaatagaa 89 |||||||||||||||||||| |||||||||||||| Sbjct: 2170 agactggaatatgaataggagaggcctgaatagaa 2136
>gb|AF410800.1|AF410800 Xenopus laevis nodal related 4 (Xnr4) gene, partial cds Length = 9056 Score = 61.9 bits (31), Expect = 7e-07 Identities = 46/50 (92%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 42 attgatttgaataaga--ctggaatatgaataggaaaggcctgaatagaa 89 |||||||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 5838 attgatttgaataagagactggaatatgaataggagaggccggaatagaa 5789
>gb|BC063271.1| Xenopus laevis hypothetical protein MGC68956, mRNA (cDNA clone MGC:68956 IMAGE:4959385), complete cds Length = 5882 Score = 60.0 bits (30), Expect = 3e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 12 ggtccaaattacactagcaaccatgaattgattg 45 ||||||||||||||||||||||||| |||||||| Sbjct: 4502 ggtccaaattacactagcaaccatgtattgattg 4535 Score = 50.1 bits (25), Expect = 0.003 Identities = 28/29 (96%) Strand = Plus / Plus Query: 55 agactggaatatgaataggaaaggcctga 83 |||||||||||||||||||| |||||||| Sbjct: 2931 agactggaatatgaataggagaggcctga 2959
>gb|BC044027.1| Xenopus laevis sideroflexin 1, mRNA (cDNA clone MGC:53427 IMAGE:5571808), complete cds Length = 2236 Score = 60.0 bits (30), Expect = 3e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 56 gactggaatatgaataggaaaggcctgaatagaa 89 ||||||||||||||||||| |||||||||||||| Sbjct: 1746 gactggaatatgaataggagaggcctgaatagaa 1713
>gb|BC082644.1| Xenopus laevis hypothetical LOC494667, mRNA (cDNA clone MGC:81604 IMAGE:6863738), complete cds Length = 2525 Score = 60.0 bits (30), Expect = 3e-06 Identities = 64/75 (85%), Gaps = 4/75 (5%) Strand = Plus / Plus Query: 15 ccaaattacactagcaaccatgaattgattgatttgaataagactggaatatgaatagga 74 |||||||||||| ||||||||| |||| ||||||| ||||||| ||||||||||| Sbjct: 1699 ccaaattacacttgcaaccatg----cattggtttgaatgagactgggttatgaatagga 1754 Query: 75 aaggcctgaatagaa 89 |||||||||||||| Sbjct: 1755 gaggcctgaatagaa 1769
>gb|BC080996.1| Xenopus laevis stromal cell derived factor 4, mRNA (cDNA clone MGC:80685 IMAGE:5511253), complete cds Length = 2756 Score = 58.0 bits (29), Expect = 1e-05 Identities = 73/87 (83%), Gaps = 2/87 (2%) Strand = Plus / Plus Query: 44 tgatttgaataa--gactggaatatgaataggaaaggcctgaatagaaggatcagtacta 101 |||||||||||| ||||||||||||||||| | ||||||||| |||| ||| ||| || Sbjct: 1846 tgatttgaataatagactggaatatgaatagtagaggcctgaacagaaagatgagtgata 1905 Query: 102 aaaacttacantaaatgtgtagcctta 128 |||| | ||| || || |||||||||| Sbjct: 1906 aaaagtaacaatacatttgtagcctta 1932
>gb|BC055972.1| Xenopus laevis hypothetical protein MGC68843, mRNA (cDNA clone MGC:68843 IMAGE:4679853), complete cds Length = 2518 Score = 58.0 bits (29), Expect = 1e-05 Identities = 44/48 (91%), Gaps = 2/48 (4%) Strand = Plus / Plus Query: 44 tgatttgaataaga--ctggaatatgaataggaaaggcctgaatagaa 89 |||||||||||||| ||||||||||||||||| | |||||||||||| Sbjct: 1657 tgatttgaataagagactggaatatgaataggagaagcctgaatagaa 1704
>gb|BC084770.1| Xenopus laevis hypothetical LOC495310, mRNA (cDNA clone MGC:82027 IMAGE:7010856), complete cds Length = 1465 Score = 58.0 bits (29), Expect = 1e-05 Identities = 44/48 (91%), Gaps = 2/48 (4%) Strand = Plus / Minus Query: 44 tgatttgaataaga--ctggaatatgaataggaaaggcctgaatagaa 89 |||||||||||||| ||||||||||||||||| || ||||||||||| Sbjct: 1208 tgatttgaataagagactggaatatgaataggagagacctgaatagaa 1161
>gb|BC078009.1| Xenopus laevis PTPRF interacting protein, binding protein 2 (liprin beta 2), mRNA (cDNA clone MGC:82508 IMAGE:4963336), complete cds Length = 4779 Score = 56.0 bits (28), Expect = 4e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 55 agactggaatatgaataggaaaggcctgaata 86 |||||||||||||||||||| ||||||||||| Sbjct: 4112 agactggaatatgaataggagaggcctgaata 4143
>gb|BC073613.1| Xenopus laevis MGC82927 protein, mRNA (cDNA clone MGC:82927 IMAGE:5514087), complete cds Length = 2537 Score = 56.0 bits (28), Expect = 4e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 54 aagactggaatatgaataggaaaggcctgaatagaa 89 ||||||||||||||||||||| |||||| ||||||| Sbjct: 1803 aagactggaatatgaataggagaggcctaaatagaa 1838
>gb|AC156250.2| Xenopus tropicalis clone ISB1-258K10, complete sequence Length = 79665 Score = 56.0 bits (28), Expect = 4e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 54 aagactggaatatgaataggaaaggcctgaatagaa 89 ||||||||||||||||||||| ||||||||| |||| Sbjct: 62329 aagactggaatatgaataggagaggcctgaaaagaa 62364
>gb|AC156251.2| Xenopus tropicalis clone ISB1-273O4, complete sequence Length = 52150 Score = 56.0 bits (28), Expect = 4e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 54 aagactggaatatgaataggaaaggcctgaatagaa 89 ||||||||||||||||||||| ||||||||| |||| Sbjct: 8781 aagactggaatatgaataggagaggcctgaaaagaa 8746
>gb|BC084815.1| Xenopus laevis hypothetical LOC495351, mRNA (cDNA clone MGC:85252 IMAGE:6873438), complete cds Length = 1184 Score = 56.0 bits (28), Expect = 4e-05 Identities = 68/80 (85%), Gaps = 6/80 (7%) Strand = Plus / Plus Query: 12 ggtccaaattacactagcaaccatgaattgattgatttgaata--agactggaatatgaa 69 |||||||||||| ||||||||| || ||||||||||||| ||||||| ||||||| Sbjct: 691 ggtccaaattactctagcaaccctg----cattgatttgaataagagactgggatatgaa 746 Query: 70 taggaaaggcctgaatagaa 89 |||| |||||||||||||| Sbjct: 747 taggcgaggcctgaatagaa 766
>gb|BC083023.1| Xenopus laevis hypothetical LOC494848, mRNA (cDNA clone MGC:98951 IMAGE:4202285), complete cds Length = 2337 Score = 56.0 bits (28), Expect = 4e-05 Identities = 80/96 (83%), Gaps = 6/96 (6%) Strand = Plus / Plus Query: 12 ggtccaaattacactagcaaccatgaattgattgatttgaataaga--ctggaatatgaa 69 |||||||||||| | |||||||||| ||||||| ||||| ||| ||| |||||||| Sbjct: 1106 ggtccaaattaccccagcaaccatgcattgatt----tgaattagagactgtaatatgaa 1161 Query: 70 taggaaaggcctgaatagaaggatcagtactaaaaa 105 ||||| ||||||| |||||| ||| |||| |||||| Sbjct: 1162 taggagaggcctgcatagaaagataagtagtaaaaa 1197
>gb|BC110939.1| Xenopus laevis cDNA clone MGC:132114 IMAGE:6948231, complete cds Length = 4607 Score = 56.0 bits (28), Expect = 4e-05 Identities = 71/84 (84%), Gaps = 6/84 (7%) Strand = Plus / Plus Query: 12 ggtccaaattacactagcaaccatgaattgattgatttgaata--agactggaatatgaa 69 |||||||||||| |||||||||||| ||||||||| ||| ||||| ||||||||| Sbjct: 3651 ggtccaaattaccctagcaaccatg----cattgatttggataagagactagaatatgaa 3706 Query: 70 taggaaaggcctgaatagaaggat 93 ||||| ||||| ||||| |||||| Sbjct: 3707 taggagaggccagaatacaaggat 3730
>gb|AC151315.2| Xenopus tropicalis clone ISB-195F15, complete sequence Length = 73302 Score = 56.0 bits (28), Expect = 4e-05 Identities = 47/52 (90%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 55 agactggaatatgaataggaaa-ggcctgaatagaaggatcagtactaaaaa 105 |||||||||||||||||||||| |||||| |||||| ||| |||| |||||| Sbjct: 26463 agactggaatatgaataggaaagggcctggatagaaagatgagtaataaaaa 26514
>gb|BC081008.1| Xenopus laevis WD repeat domain 5, mRNA (cDNA clone MGC:81485 IMAGE:6636637), complete cds Length = 2645 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 55 agactggaatatgaataggaaaggcctgaatagaaggatcagtactaaaaa 105 |||||||||||||| ||||| || ||||||||||| ||| |||| |||||| Sbjct: 1704 agactggaatatgattaggagagtcctgaatagaaagatgagtaataaaaa 1754
>gb|BC082527.1| Xenopus tropicalis cDNA clone IMAGE:7025664 Length = 1560 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 47 tttgaataagactggaatatgaataggaaaggcctgaatagaa 89 ||||||| ||||||||||||||||||| | ||||| ||||||| Sbjct: 1422 tttgaatgagactggaatatgaatagggagggcctaaatagaa 1464
>gb|BC073049.1| Xenopus laevis hypothetical protein LOC443613, mRNA (cDNA clone IMAGE:5073785), partial cds Length = 1514 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 55 agactggaatatgaataggaaaggcctgaatagaa 89 ||||||||||||||| |||| |||||||||||||| Sbjct: 1171 agactggaatatgaaaaggagaggcctgaatagaa 1205
>gb|BC076852.1| Xenopus laevis cDNA clone IMAGE:6637905, containing frame-shift errors Length = 3857 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 55 agactggaatatgaataggaaaggcctgaatagaa 89 |||| ||||||||||||||| |||||||||||||| Sbjct: 2478 agaccggaatatgaataggagaggcctgaatagaa 2512
>gb|AC147885.2| Xenopus tropicalis clone CH216-12C9, complete sequence Length = 222162 Score = 54.0 bits (27), Expect = 2e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 55 agactggaatatgaataggaaaggcct 81 ||||||||||||||||||||||||||| Sbjct: 3962 agactggaatatgaataggaaaggcct 3936
>gb|BC046684.1| Xenopus laevis similar to RNA binding motif protein 14, mRNA (cDNA clone IMAGE:5542213), partial cds Length = 3741 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 55 agactggaatatgaataggaaaggcctgaatagaaggatcagtactaaaaa 105 ||||||| ||||||||||| |||||||||||||| ||| |||| |||||| Sbjct: 2557 agactggtatatgaataggtgaggcctgaatagaaagatgagtaataaaaa 2607
>emb|X56871.1|XLCMYC1G X.laevis c-myc I gene (exon 1 & partial exon 2) Length = 2398 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/50 (90%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 42 attgatttgaataag--actggaatatgaataggaaaggcctgaatagaa 89 ||||||||||||||| |||| ||||||||||||| ||||||||| |||| Sbjct: 696 attgatttgaataagggactgcaatatgaataggagaggcctgaacagaa 647
>emb|X53717.1|XLCMYC X.laevis c-myc gene Length = 6833 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/50 (90%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 42 attgatttgaataag--actggaatatgaataggaaaggcctgaatagaa 89 ||||||||||||||| |||| ||||||||||||| ||||||||| |||| Sbjct: 1293 attgatttgaataagggactgcaatatgaataggagaggcctgaacagaa 1244
>emb|AJ605770.1| Xenopus laevis partial mycI gene for MYC oncoprotein, exons 1-2 Length = 5580 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/50 (90%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 42 attgatttgaataag--actggaatatgaataggaaaggcctgaatagaa 89 ||||||||||||||| |||| ||||||||||||| ||||||||| |||| Sbjct: 3874 attgatttgaataagggactgcaatatgaataggagaggcctgaacagaa 3825
>gb|BC082635.1| Xenopus laevis hypothetical LOC494662, mRNA (cDNA clone MGC:81529 IMAGE:6862571), complete cds Length = 2946 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 55 agactggaatatgaataggaaaggcctgaatagaaggatcagtactaaaaa 105 ||||||||||||||| |||| |||||||| ||||| ||| |||| |||||| Sbjct: 2555 agactggaatatgaaaaggagaggcctgagtagaatgataagtaataaaaa 2605 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Plus Query: 12 ggtccaaattacactagcaaccatgaattgatt 44 |||||||||| | ||||||||||| |||||||| Sbjct: 2732 ggtccaaattcccctagcaaccataaattgatt 2764
>gb|AC148993.1| frog geminen, complete sequence Length = 72080 Score = 52.0 bits (26), Expect = 7e-04 Identities = 67/79 (84%), Gaps = 5/79 (6%) Strand = Plus / Plus Query: 12 ggtccaaattacactagcaaccatgaattgattgatttgaataagactggaatatgaata 71 |||||||||||| |||||||||||| | ||||| ||| ||||||||| ||||||||| Sbjct: 3526 ggtccaaattaccctagcaaccatgcagtgatt----tgagtaagactggtatatgaata 3581 Query: 72 ggaaagg-cctgaatagaa 89 ||| || ||||||||||| Sbjct: 3582 ggagggggcctgaatagaa 3600
>gb|BC060755.1| Xenopus laevis hypothetical protein MGC69083, mRNA (cDNA clone MGC:69083 IMAGE:4969000), complete cds Length = 6129 Score = 52.0 bits (26), Expect = 7e-04 Identities = 57/65 (87%), Gaps = 3/65 (4%) Strand = Plus / Minus Query: 44 tgatttgaataaga--ctggaatatgaataggaaagg-cctgaatagaaggatcagtact 100 |||||||||||||| ||||||||||||||||| ||| |||||||||| ||| |||| | Sbjct: 4275 tgatttgaataagagactggaatatgaataggagaggaactgaatagaaagatgagtaat 4216 Query: 101 aaaaa 105 ||||| Sbjct: 4215 aaaaa 4211
>ref|NM_001030528.1| Xenopus tropicalis plastin 3 (T isoform) (pls1), mRNA Length = 3967 Score = 52.0 bits (26), Expect = 7e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 60 ggaatatgaataggaaaggcctgaatagaa 89 ||||||||||||||| |||||||||||||| Sbjct: 3091 ggaatatgaataggagaggcctgaatagaa 3120
>gb|AC148449.2| Xenopus tropicalis clone CH216-118D6, complete sequence Length = 165682 Score = 52.0 bits (26), Expect = 7e-04 Identities = 59/69 (85%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 59 tggaatatgaataggaaagg-cctgaatagaaggatcagtactaaaaacttacantaaat 117 ||||||||||| |||||||| ||||||||||| ||| |||| |||||| | ||| |||| Sbjct: 86500 tggaatatgaacaggaaagggcctgaatagaaagataagtaataaaaagtaacaataaaa 86441 Query: 118 gtgtagcct 126 |||||||| Sbjct: 86440 ctgtagcct 86432
>emb|AJ242680.1|XLA242680 Xenopus laevis mRNA for XFD-13 protein Length = 3130 Score = 52.0 bits (26), Expect = 7e-04 Identities = 57/65 (87%), Gaps = 3/65 (4%) Strand = Plus / Minus Query: 44 tgatttgaataaga--ctggaatatgaataggaaaggc-ctgaatagaaggatcagtact 100 |||||||||||||| ||||||||||| || || ||| ||||||||||||||||||| | Sbjct: 2331 tgatttgaataagagactggaatatgattaagagaggagctgaatagaaggatcagtaat 2272 Query: 101 aaaaa 105 ||||| Sbjct: 2271 aaaaa 2267
>gb|BC094886.1| Xenopus tropicalis plastin 3 (T isoform), mRNA (cDNA clone MGC:106020 IMAGE:5307467), complete cds Length = 3967 Score = 52.0 bits (26), Expect = 7e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 60 ggaatatgaataggaaaggcctgaatagaa 89 ||||||||||||||| |||||||||||||| Sbjct: 3091 ggaatatgaataggagaggcctgaatagaa 3120
>emb|CR942424.2| Xenopus tropicalis finished cDNA, clone TTpA018e21 Length = 3776 Score = 52.0 bits (26), Expect = 7e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 60 ggaatatgaataggaaaggcctgaatagaa 89 ||||||||||||||| |||||||||||||| Sbjct: 3083 ggaatatgaataggagaggcctgaatagaa 3112
>gb|BC073591.1| Xenopus laevis MGC82892 protein, mRNA (cDNA clone MGC:82892 IMAGE:5512695), complete cds Length = 1430 Score = 50.1 bits (25), Expect = 0.003 Identities = 28/29 (96%) Strand = Plus / Minus Query: 55 agactggaatatgaataggaaaggcctga 83 |||||||||||||||||||| |||||||| Sbjct: 1298 agactggaatatgaataggagaggcctga 1270
>gb|AC148453.2| Xenopus tropicalis clone CH216-147I21, complete sequence Length = 158285 Score = 50.1 bits (25), Expect = 0.003 Identities = 35/37 (94%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 55 agactggaatatgaatagga-aaggcctgaatagaag 90 |||||||||||||||||||| | |||||||||||||| Sbjct: 91795 agactggaatatgaataggatagggcctgaatagaag 91759
>emb|CT025422.2| Xenopus tropicalis finished cDNA, clone TGas066i03 Length = 2364 Score = 50.1 bits (25), Expect = 0.003 Identities = 44/49 (89%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 57 actggaatatgaatagga-aaggcctgaatagaaggatcagtactaaaa 104 |||||||||||||||||| | ||||||||||||| | | |||||||||| Sbjct: 2000 actggaatatgaataggagagggcctgaatagaaaggtaagtactaaaa 2048
>gb|BC093561.1| Xenopus laevis cDNA clone MGC:115337 IMAGE:6949477, complete cds Length = 1295 Score = 50.1 bits (25), Expect = 0.003 Identities = 56/65 (86%), Gaps = 6/65 (9%) Strand = Plus / Plus Query: 12 ggtccaaattacactagcaaccatgaattgattgatttgaata--agactggaatatgaa 69 ||||||| |||| |||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 651 ggtccaagttaccctagcaaccatg----cattgatttgaataagagactggaatatgaa 706 Query: 70 tagga 74 ||||| Sbjct: 707 tagga 711
>emb|X71081.1|XLS8 X.laevis gene for ribosomal protein S8 Length = 13556 Score = 50.1 bits (25), Expect = 0.003 Identities = 56/65 (86%), Gaps = 6/65 (9%) Strand = Plus / Plus Query: 12 ggtccaaattacactagcaaccatgaattgattgatttgaata--agactggaatatgaa 69 |||||||||||| || ||||||||| ||||||||||||| ||||||||||||||| Sbjct: 11237 ggtccaaattacccttgcaaccatg----cattgatttgaataagagactggaatatgaa 11292 Query: 70 tagga 74 ||||| Sbjct: 11293 tagga 11297
>gb|AC151340.2| Xenopus tropicalis clone ISB-362A3, complete sequence Length = 101442 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Plus Query: 42 attgatttgaataagactggaatatgaatagga 74 |||||||||||| |||||| ||||||||||||| Sbjct: 71398 attgatttgaatgagactgaaatatgaatagga 71430
>gb|BC085225.1| Xenopus laevis hypothetical LOC495520, mRNA (cDNA clone IMAGE:5506680), partial cds Length = 2227 Score = 50.1 bits (25), Expect = 0.003 Identities = 63/75 (84%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 12 ggtccaaattacactagcaaccatgaattgattgatttgaataagactggaatatgaata 71 |||||||||||| |||||||||||| || |||| | || |||||| |||||||| || Sbjct: 2141 ggtccaaattaccctagcaaccatgcatagatttaatt---aaagactagaatatgatta 2085 Query: 72 ggaaaggcctgaata 86 ||| ||||||||||| Sbjct: 2084 ggagaggcctgaata 2070
>gb|BC084809.1| Xenopus laevis hypothetical LOC495346, mRNA (cDNA clone MGC:84757 IMAGE:6950298), complete cds Length = 5041 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Plus Query: 55 agactggaatatgaataggaaaggcctgaatag 87 |||||||||||| ||||||| |||||||||||| Sbjct: 3525 agactggaatataaataggagaggcctgaatag 3557
>gb|BC077827.1| Xenopus laevis zinc finger, DHHC domain containing 6, mRNA (cDNA clone MGC:80490 IMAGE:5156676), complete cds Length = 2868 Score = 48.1 bits (24), Expect = 0.011 Identities = 27/28 (96%) Strand = Plus / Minus Query: 54 aagactggaatatgaataggaaaggcct 81 ||||||||||||||||||||| |||||| Sbjct: 49 aagactggaatatgaataggagaggcct 22
>gb|BC077570.1| Xenopus laevis Janus kinase 1 (a protein tyrosine kinase), mRNA (cDNA clone MGC:83553 IMAGE:5078963), complete cds Length = 5252 Score = 48.1 bits (24), Expect = 0.011 Identities = 33/35 (94%), Gaps = 2/35 (5%) Strand = Plus / Plus Query: 42 attgatttgaataaga--ctggaatatgaatagga 74 |||||||||||||||| ||||||||||||||||| Sbjct: 3974 attgatttgaataagagactggaatatgaatagga 4008
>gb|BC073042.1| Xenopus laevis MGC82658 protein, mRNA (cDNA clone MGC:82658 IMAGE:5073252), complete cds Length = 1146 Score = 48.1 bits (24), Expect = 0.011 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 55 agactggaatatgaatagga-aaggcctgaatagaa 89 |||||||||||||||||||| | ||||||||||||| Sbjct: 1029 agactggaatatgaataggagatggcctgaatagaa 994
>gb|BC060461.1| Xenopus laevis hypothetical protein MGC68593, mRNA (cDNA clone MGC:68593 IMAGE:4031849), complete cds Length = 4149 Score = 48.1 bits (24), Expect = 0.011 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 55 agactggaatatgaatagga-aaggcctgaatagaa 89 |||||||||||||||||||| | ||||||||||||| Sbjct: 1502 agactggaatatgaataggagagggcctgaatagaa 1537
>gb|BC055270.1| Xenopus laevis hypothetical protein LOC398673, mRNA (cDNA clone IMAGE:6878813), partial cds Length = 1920 Score = 48.1 bits (24), Expect = 0.011 Identities = 67/80 (83%), Gaps = 6/80 (7%) Strand = Plus / Minus Query: 12 ggtccaaattacactagcaaccatgaattgattgatttgaataaga--ctggaatatgaa 69 ||||||||| || |||||||||||| ||||||| |||| |||| |||||||||||| Sbjct: 1829 ggtccaaatgactctagcaaccatgcattgatt----tgaacaagagactggaatatgaa 1774 Query: 70 taggaaaggcctgaatagaa 89 |||| || ||||||| |||| Sbjct: 1773 tagggaaagcctgaacagaa 1754
>gb|DQ096849.1| Xenopus laevis comp43 mRNA, complete sequence Length = 1126 Score = 48.1 bits (24), Expect = 0.011 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 55 agactggaatatgaatagga-aaggcctgaatagaa 89 |||||||||||||||||||| | ||||||||||||| Sbjct: 1024 agactggaatatgaataggagatggcctgaatagaa 989
>gb|AC160831.2| Xenopus tropicalis BAC clone ISB1-45G24 containing the 3' end of the MYT1 gene, complete sequence Length = 79158 Score = 48.1 bits (24), Expect = 0.011 Identities = 39/44 (88%) Strand = Plus / Plus Query: 55 agactggaatatgaataggaaaggcctgaatagaaggatcagta 98 ||||||| |||||||||||| ||| |||||||||| ||| |||| Sbjct: 56706 agactggtatatgaataggagaggactgaatagaaagataagta 56749
>gb|AC150773.2| Xenopus tropicalis clone CH216-69F7, complete sequence Length = 115925 Score = 48.1 bits (24), Expect = 0.011 Identities = 42/48 (87%) Strand = Plus / Plus Query: 57 actggaatatgaataggaaaggcctgaatagaaggatcagtactaaaa 104 ||||| |||| ||||||||||||||||||| || ||| |||| ||||| Sbjct: 86537 actggtatataaataggaaaggcctgaatataaagataagtattaaaa 86584
>gb|BC084747.1| Xenopus laevis hypothetical LOC495292, mRNA (cDNA clone MGC:80146 IMAGE:4970174), complete cds Length = 6863 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Plus Query: 13 gtccaaattacactagcaaccatgaattgatt 44 ||||||||||| |||||||||||| ||||||| Sbjct: 5419 gtccaaattaccctagcaaccatgcattgatt 5450
>gb|BC108865.1| Xenopus laevis cDNA clone IMAGE:6318366, partial cds Length = 2454 Score = 48.1 bits (24), Expect = 0.011 Identities = 67/80 (83%), Gaps = 6/80 (7%) Strand = Plus / Minus Query: 12 ggtccaaattacactagcaaccatgaattgattgatttgaataaga--ctggaatatgaa 69 ||||||||| || |||||||||||| ||||||| |||| |||| |||||||||||| Sbjct: 1912 ggtccaaatgactctagcaaccatgcattgatt----tgaacaagagactggaatatgaa 1857 Query: 70 taggaaaggcctgaatagaa 89 |||| || ||||||| |||| Sbjct: 1856 tagggaaagcctgaacagaa 1837
>gb|BC081231.1| Xenopus laevis MGC85474 protein, mRNA (cDNA clone MGC:85474 IMAGE:6937867), complete cds Length = 2178 Score = 46.1 bits (23), Expect = 0.042 Identities = 44/50 (88%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 42 attgatttgaataag--actggaatatgaataggaaaggcctgaatagaa 89 |||||||| |||||| |||| | ||||||||||| |||||||||||||| Sbjct: 2051 attgatttcaataagtgactgcactatgaataggagaggcctgaatagaa 2002
>gb|BC082687.1| Xenopus laevis cDNA clone IMAGE:6937376 Length = 1788 Score = 46.1 bits (23), Expect = 0.042 Identities = 29/31 (93%) Strand = Plus / Minus Query: 12 ggtccaaattacactagcaaccatgaattga 42 |||||||||||| |||||||||||| ||||| Sbjct: 994 ggtccaaattaccctagcaaccatgcattga 964
>gb|BC070817.1| Xenopus laevis hypothetical protein MGC83900, mRNA (cDNA clone MGC:83900 IMAGE:6859229), complete cds Length = 1980 Score = 46.1 bits (23), Expect = 0.042 Identities = 32/35 (91%) Strand = Plus / Minus Query: 55 agactggaatatgaataggaaaggcctgaatagaa 89 |||| ||||||| ||||||| |||||||||||||| Sbjct: 1809 agacaggaatataaataggagaggcctgaatagaa 1775
>gb|BC068965.1| Xenopus laevis hypothetical protein LOC414586, mRNA (cDNA clone IMAGE:6637270), partial cds Length = 4750 Score = 46.1 bits (23), Expect = 0.042 Identities = 32/35 (91%) Strand = Plus / Minus Query: 55 agactggaatatgaataggaaaggcctgaatagaa 89 ||||||||||||||||| || ||||| |||||||| Sbjct: 2960 agactggaatatgaataagagaggcccgaatagaa 2926
>gb|AC157720.2| Xenopus tropicalis clone ISB1-273I4, complete sequence Length = 79009 Score = 46.1 bits (23), Expect = 0.042 Identities = 32/35 (91%) Strand = Plus / Plus Query: 55 agactggaatatgaataggaaaggcctgaatagaa 89 ||||||| | |||||||||| |||||||||||||| Sbjct: 44868 agactggtaaatgaataggagaggcctgaatagaa 44902
>gb|AC145802.2| Xenopus tropicalis clone CH216-80C17, complete sequence Length = 163910 Score = 46.1 bits (23), Expect = 0.042 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 55 agactggaatatgaatagga-aaggcctgaatagaaggatcagtactaaaaacttacant 113 ||||||| |||||||||||| | ||||||||||||| || |||| |||||| ||||| | Sbjct: 54382 agactggtatatgaataggagagggcctgaatagaaaaataagtaataaaaagttacaat 54323 Query: 114 aa 115 || Sbjct: 54322 aa 54321
>emb|CT030495.1| Xenopus tropicalis finished cDNA, clone TGas038n24 Length = 4208 Score = 46.1 bits (23), Expect = 0.042 Identities = 54/62 (87%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 47 tttgaataaga--ctggaatatgaataggaaagg-cctgaatagaaggatcagtactaaa 103 ||||||||||| |||||||||||||||| ||| ||||||||||| ||| |||| |||| Sbjct: 4005 tttgaataagaaactggaatatgaataggcgagggcctgaatagaaagataagtaataaa 4064 Query: 104 aa 105 || Sbjct: 4065 aa 4066
>gb|AC149594.2| Xenopus tropicalis chromosome CH216-62P2, complete sequence Length = 167602 Score = 46.1 bits (23), Expect = 0.042 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 56 gactggaatatgaataggaa-aggcctgaatagaa 89 |||||||||||||||||||| ||||||||||||| Sbjct: 4805 gactggaatatgaataggaaggggcctgaatagaa 4839 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 55 agactggaatatgaatagga-aaggcctgaatagaa 89 |||| ||||||||||||||| | ||||||||||||| Sbjct: 70697 agacaggaatatgaataggagagggcctgaatagaa 70662
>gb|AF234786.1|AF234786 Xenopus laevis fibroblast growth factor receptor ligand 1 (FRL1) gene, complete cds Length = 2897 Score = 46.1 bits (23), Expect = 0.042 Identities = 29/31 (93%) Strand = Plus / Minus Query: 14 tccaaattacactagcaaccatgaattgatt 44 |||||||||| |||||||||||| ||||||| Sbjct: 1346 tccaaattaccctagcaaccatgcattgatt 1316
>gb|BC089192.1| Xenopus laevis cDNA clone IMAGE:3397483 Length = 2954 Score = 46.1 bits (23), Expect = 0.042 Identities = 29/31 (93%) Strand = Plus / Plus Query: 14 tccaaattacactagcaaccatgaattgatt 44 |||||||||| |||||||||||| ||||||| Sbjct: 1286 tccaaattaccctagcaaccatgcattgatt 1316
>gb|BC077454.1| Xenopus laevis hypothetical LOC494586, mRNA (cDNA clone MGC:82402 IMAGE:4408900), complete cds Length = 892 Score = 46.1 bits (23), Expect = 0.042 Identities = 29/31 (93%) Strand = Plus / Minus Query: 14 tccaaattacactagcaaccatgaattgatt 44 |||||||||| |||||||||||| ||||||| Sbjct: 799 tccaaattaccctagcaaccatgcattgatt 769 Score = 44.1 bits (22), Expect = 0.17 Identities = 43/50 (86%) Strand = Plus / Minus Query: 55 agactggaatatgaataggaaaggcctgaatagaaggatcagtactaaaa 104 ||||||||||||| | |||| |||||| ||||||| ||| |||| ||||| Sbjct: 760 agactggaatatgcaaaggagaggcctaaatagaaagatgagtaataaaa 711
>gb|AC149154.3| Xenopus tropicalis clone ISB-241F10, complete sequence Length = 96260 Score = 44.1 bits (22), Expect = 0.17 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 65 atgaatagga-aaggcctgaatagaaggatcagtactaaaaa 105 |||||||||| ||||||||||||||| ||| |||| |||||| Sbjct: 51098 atgaataggagaaggcctgaatagaaagataagtaataaaaa 51139
>gb|BC077999.1| Xenopus laevis MGC82412 protein, mRNA (cDNA clone MGC:82412 IMAGE:4633695), complete cds Length = 2623 Score = 44.1 bits (22), Expect = 0.17 Identities = 28/30 (93%) Strand = Plus / Minus Query: 15 ccaaattacactagcaaccatgaattgatt 44 ||||||||| |||||||||||| ||||||| Sbjct: 1417 ccaaattaccctagcaaccatgcattgatt 1388
>gb|BC077799.1| Xenopus laevis MGC80409 protein, mRNA (cDNA clone MGC:80409 IMAGE:5155042), complete cds Length = 1766 Score = 44.1 bits (22), Expect = 0.17 Identities = 28/30 (93%) Strand = Plus / Minus Query: 57 actggaatatgaataggaaaggcctgaata 86 |||||||||||||||||| |||||||||| Sbjct: 1396 actggaatatgaataggagtggcctgaata 1367
>gb|BC077864.1| Xenopus laevis MGC80587 protein, mRNA (cDNA clone MGC:80587 IMAGE:5505711), complete cds Length = 2383 Score = 44.1 bits (22), Expect = 0.17 Identities = 34/38 (89%) Strand = Plus / Minus Query: 61 gaatatgaataggaaaggcctgaatagaaggatcagta 98 |||||||||||||| |||||| ||||||| ||| |||| Sbjct: 1904 gaatatgaataggagaggcctaaatagaaagatgagta 1867
>gb|BC074469.1| Xenopus laevis cDNA clone IMAGE:6950680, partial cds Length = 4110 Score = 44.1 bits (22), Expect = 0.17 Identities = 31/33 (93%), Gaps = 2/33 (6%) Strand = Plus / Minus Query: 44 tgatttgaataaga--ctggaatatgaatagga 74 |||||||||||||| ||||||||||||||||| Sbjct: 3721 tgatttgaataagagactggaatatgaatagga 3689
>gb|AY204555.1| Xenopus laevis transporter associated with antigen processing 2 (TAP2) mRNA, TAP2-j allele, partial cds Length = 1757 Score = 44.1 bits (22), Expect = 0.17 Identities = 44/49 (89%), Gaps = 3/49 (6%) Strand = Plus / Plus Query: 44 tgatttgaataaga--ctggaatatgaataggaaagg-cctgaatagaa 89 |||||||||||||| ||||||||||||||| | ||| ||||||||||| Sbjct: 1066 tgatttgaataagagactggaatatgaatagaagaggacctgaatagaa 1114
>gb|AY204554.1| Xenopus laevis transporter associated with antigen processing 2 (TAP2) mRNA, TAP2-j allele, complete cds Length = 4235 Score = 44.1 bits (22), Expect = 0.17 Identities = 44/49 (89%), Gaps = 3/49 (6%) Strand = Plus / Plus Query: 44 tgatttgaataaga--ctggaatatgaataggaaagg-cctgaatagaa 89 |||||||||||||| ||||||||||||||| | ||| ||||||||||| Sbjct: 2725 tgatttgaataagagactggaatatgaatagaagaggacctgaatagaa 2773
>gb|AC145790.2| Xenopus tropicalis clone CH216-12L5, complete sequence Length = 192318 Score = 44.1 bits (22), Expect = 0.17 Identities = 28/30 (93%) Strand = Plus / Plus Query: 15 ccaaattacactagcaaccatgaattgatt 44 ||||||||| |||||||||||| ||||||| Sbjct: 15525 ccaaattaccctagcaaccatgcattgatt 15554 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 54 aagactggaatatgaataggaaagg 78 ||||||||||||| ||||||||||| Sbjct: 171011 aagactggaatataaataggaaagg 170987
>gb|AF072455.1|AF072455 Xenopus laevis gelatinase B (MMP-9) mRNA, complete cds Length = 3451 Score = 44.1 bits (22), Expect = 0.17 Identities = 40/45 (88%), Gaps = 2/45 (4%) Strand = Plus / Minus Query: 44 tgatttgaata--agactggaatatgaataggaaaggcctgaata 86 ||||||||||| ||||||||||||||| |||| |||||||||| Sbjct: 3004 tgatttgaatacaagactggaatatgaaaaggaggggcctgaata 2960
>gb|AF020551.1|AF020551 Xenopus laevis ribosomal protein S6 (rpS6) gene, complete cds Length = 7157 Score = 44.1 bits (22), Expect = 0.17 Identities = 31/34 (91%) Strand = Plus / Plus Query: 12 ggtccaaattacactagcaaccatgaattgattg 45 |||||||||||| ||||||||||| |||||||| Sbjct: 5440 ggtccaaattaccatagcaaccatgtattgattg 5473
>gb|BC084932.1| Xenopus laevis hypothetical LOC495420, mRNA (cDNA clone MGC:81625 IMAGE:6863999), complete cds Length = 2056 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 46 atttgaataagactggaatatgaata 71 |||||||| ||||||||||||||||| Sbjct: 1860 atttgaatgagactggaatatgaata 1885
>gb|AC147211.2| Xenopus tropicalis clone CH216-77F21, complete sequence Length = 156239 Score = 42.1 bits (21), Expect = 0.66 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 56 gactggaatatgaataggaaagg-cctgaatagaaggatcagtactaaa 103 ||||||||||||| ||||| ||| ||||||||||| ||| |||| |||| Sbjct: 103432 gactggaatatgagtaggagagggcctgaatagaaagataagtaataaa 103480
>gb|BC078070.1| Xenopus laevis solute carrier family 35, member A5, mRNA (cDNA clone MGC:82939 IMAGE:5514404), complete cds Length = 2731 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 12 ggtccaaattacactagcaaccatgaattgatt 44 ||||||| |||| |||||||||||| ||||||| Sbjct: 2611 ggtccaagttaccctagcaaccatgcattgatt 2579
>gb|BC080029.1| Xenopus laevis hypothetical protein LOC446283, mRNA (cDNA clone IMAGE:5512401), partial cds Length = 2183 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 12 ggtccaaattacactagcaaccatgaattgatt 44 |||||||||||| |||| ||||||| ||||||| Sbjct: 1570 ggtccaaattaccctagtaaccatgcattgatt 1538
>gb|BC081089.1| Xenopus laevis MGC82675 protein, mRNA (cDNA clone MGC:82675 IMAGE:5073793), complete cds Length = 4241 Score = 42.1 bits (21), Expect = 0.66 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 63 atatgaataggaaa-ggcctgaatagaaggatcagta 98 |||||||||||||| || |||||||||||||| |||| Sbjct: 4163 atatgaataggaaaggggctgaatagaaggataagta 4199
>gb|AC147895.2| Xenopus tropicalis clone CH216-3D8, complete sequence Length = 212769 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 aagactggaatatgaatagga 74 ||||||||||||||||||||| Sbjct: 90839 aagactggaatatgaatagga 90859
>gb|BC080169.1| Xenopus laevis cDNA clone IMAGE:4031173 Length = 2221 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Plus Query: 12 ggtccaaattacactagcaaccatgaattgatt 44 |||||| ||||| |||||||||||| ||||||| Sbjct: 187 ggtccacattaccctagcaaccatgcattgatt 219
>gb|BC073461.1| Xenopus laevis MGC80972 protein, mRNA (cDNA clone MGC:80972 IMAGE:5536618), complete cds Length = 1820 Score = 42.1 bits (21), Expect = 0.66 Identities = 27/29 (93%) Strand = Plus / Minus Query: 16 caaattacactagcaaccatgaattgatt 44 |||||||| |||||||||||| ||||||| Sbjct: 1745 caaattaccctagcaaccatgcattgatt 1717
>gb|BC072157.1| Xenopus laevis hypothetical protein MGC80150, mRNA (cDNA clone MGC:80150 IMAGE:4970203), complete cds Length = 2325 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ggtccaaattacactagcaaccatg 36 |||||||||||| |||||||||||| Sbjct: 1930 ggtccaaattaccctagcaaccatg 1906 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 tgaataggaaaggcctgaatagaa 89 ||||||||| |||||||||||||| Sbjct: 1875 tgaataggagaggcctgaatagaa 1852
>gb|BC060454.1| Xenopus laevis hypothetical protein MGC68521, mRNA (cDNA clone MGC:68521 IMAGE:4030815), complete cds Length = 4680 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 12 ggtccaaattacactagcaaccatgaattgatt 44 ||||||||| || |||||||||||| ||||||| Sbjct: 2952 ggtccaaatcaccctagcaaccatgcattgatt 2920
>emb|Z11688.1|XBU7SNRNA X.borealis U7 small nuclear RNA Length = 684 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 aagactggaatatgaatagga 74 ||||||||||||||||||||| Sbjct: 25 aagactggaatatgaatagga 5
>gb|AY353253.1| Xenopus laevis condensin II non-SMC subunit mRNA, partial cds Length = 1289 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/32 (93%), Gaps = 2/32 (6%) Strand = Plus / Minus Query: 42 attgatttgaataa--gactggaatatgaata 71 |||||||||||||| |||||||||||||||| Sbjct: 1163 attgatttgaataaaagactggaatatgaata 1132
>gb|AC147889.2| Xenopus tropicalis clone CH216-168F2, complete sequence Length = 150457 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 aagactggaatatgaatagga 74 ||||||||||||||||||||| Sbjct: 11966 aagactggaatatgaatagga 11986
>gb|AC151466.2| Xenopus tropicalis BAC clone ISB1-283J3 containing neuroD1 gene, complete cds, complete sequence Length = 85293 Score = 42.1 bits (21), Expect = 0.66 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 54 aagactggaatatgaatagga-aaggcctgaatagaa 89 |||||||| |||||||||||| | ||||||||||||| Sbjct: 38225 aagactggtatatgaataggagagggcctgaatagaa 38189
>gb|BC093581.1| Xenopus laevis hypothetical protein LOC446283, mRNA (cDNA clone MGC:115196 IMAGE:7018623), complete cds Length = 2217 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 12 ggtccaaattacactagcaaccatgaattgatt 44 |||||||||||| |||| ||||||| ||||||| Sbjct: 1601 ggtccaaattaccctagtaaccatgcattgatt 1569
>gb|AC148599.2| Xenopus tropicalis clone CH216-2G20, complete sequence Length = 206059 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 ctggaatatgaataggaaagg 78 ||||||||||||||||||||| Sbjct: 192520 ctggaatatgaataggaaagg 192540
>gb|AF179418.1|AF179418 Xenopus laevis eomesodermin gene, promoter region Length = 8534 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Plus Query: 12 ggtccaaattacactagcaaccatgaattgatt 44 ||||||||| || |||||||||||| ||||||| Sbjct: 3704 ggtccaaatgaccctagcaaccatgcattgatt 3736
>gb|AC147906.2| Xenopus tropicalis clone CH216-71H3, complete sequence Length = 147503 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/32 (93%), Gaps = 2/32 (6%) Strand = Plus / Minus Query: 44 tgatttgaataaga--ctggaatatgaatagg 73 |||||||||||||| |||||||||||||||| Sbjct: 103975 tgatttgaataagagactggaatatgaatagg 103944 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 agactggaatatgaatagga 74 |||||||||||||||||||| Sbjct: 137213 agactggaatatgaatagga 137232
>dbj|AB078908.1| Xenopus laevis MASP gene for mannose-binding lectin-associated serine protease, partial cds, entire region of MASP-3a light-chain Length = 3858 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 12 ggtccaaattacactagcaaccatgaattgatt 44 |||||||||||| ||||||||||| ||||||| Sbjct: 3565 ggtccaaattaccttagcaaccatgtattgatt 3533
>gb|BC084929.1| Xenopus laevis hypothetical LOC495419, mRNA (cDNA clone MGC:81579 IMAGE:6863348), complete cds Length = 4129 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Plus Query: 12 ggtccaaattacactagcaaccatgaattgatt 44 ||||| |||||| |||||||||||| ||||||| Sbjct: 2983 ggtccgaattaccctagcaaccatgcattgatt 3015
>gb|BC084401.1| Xenopus laevis hypothetical LOC495182, mRNA (cDNA clone IMAGE:6958979), partial cds Length = 1986 Score = 42.1 bits (21), Expect = 0.66 Identities = 32/35 (91%), Gaps = 3/35 (8%) Strand = Plus / Minus Query: 44 tgatttgaataagactggaatatgaataggaaagg 78 |||||||||||||| |||||||||||||||||| Sbjct: 1473 tgatttgaataaga---gaatatgaataggaaagg 1442
>gb|BC084285.1| Xenopus laevis hypothetical LOC495110, mRNA (cDNA clone MGC:82661 IMAGE:5073356), complete cds Length = 3223 Score = 42.1 bits (21), Expect = 0.66 Identities = 39/44 (88%), Gaps = 2/44 (4%) Strand = Plus / Plus Query: 55 agactggaatatgaataggaaaggcctgaatagaaggatcagta 98 ||||||||||||||||| | |||||||||||||| ||| |||| Sbjct: 2869 agactggaatatgaatacg--aggcctgaatagaaagatgagta 2910
>gb|AC148456.2| Xenopus tropicalis clone CH216-168B18, complete sequence Length = 145394 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 aagactggaatatgaatagga 74 ||||||||||||||||||||| Sbjct: 99357 aagactggaatatgaatagga 99337
>gb|BC077575.1| Xenopus laevis dyslexia susceptibility 1 candidate 1, mRNA (cDNA clone MGC:83582 IMAGE:5079663), complete cds Length = 2045 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctagcaaccatgaattgatt 44 |||||||||||||||||||| Sbjct: 1841 ctagcaaccatgaattgatt 1860
>gb|BC077557.1| Xenopus laevis synovial sarcoma translocation gene on chromosome 18-like 1, mRNA (cDNA clone MGC:83522 IMAGE:4757422), complete cds Length = 6535 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 agactggaatatgaatagga 74 |||||||||||||||||||| Sbjct: 3624 agactggaatatgaatagga 3605
>gb|BC082425.1| Xenopus laevis MGC83327 protein, mRNA (cDNA clone MGC:83327 IMAGE:6864414), complete cds Length = 2265 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/35 (91%), Gaps = 2/35 (5%) Strand = Plus / Minus Query: 42 attgatttgaata--agactggaatatgaatagga 74 ||||||||||||| ||||| |||||||||||||| Sbjct: 1840 attgatttgaataagagacttgaatatgaatagga 1806
>gb|BC080102.1| Xenopus laevis MGC84380 protein, mRNA (cDNA clone MGC:84380 IMAGE:6959498), complete cds Length = 2668 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 agactggaatatgaatagga 74 |||||||||||||||||||| Sbjct: 1834 agactggaatatgaatagga 1815
>gb|BC078045.1| Xenopus laevis hypothetical protein LOC445864, mRNA (cDNA clone MGC:82810 IMAGE:5505911), complete cds Length = 4123 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 55 agactggaatatgaatagga-aaggcctgaatagaa 89 |||||||||||||| ||||| | ||||||||||||| Sbjct: 3137 agactggaatatgagtaggagagggcctgaatagaa 3172
>gb|BC077470.1| Xenopus laevis hypothetical protein LOC445864, mRNA (cDNA clone IMAGE:4959182), partial cds Length = 4204 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 55 agactggaatatgaatagga-aaggcctgaatagaa 89 |||||||||||||| ||||| | ||||||||||||| Sbjct: 3131 agactggaatatgagtaggagagggcctgaatagaa 3166
>gb|BC073192.1| Xenopus laevis MGC80434 protein, mRNA (cDNA clone MGC:80434 IMAGE:5155553), complete cds Length = 5439 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 agactggaatatgaatagga 74 |||||||||||||||||||| Sbjct: 4690 agactggaatatgaatagga 4709
>gb|BC071050.1| Xenopus laevis hypothetical protein LOC432062, mRNA (cDNA clone IMAGE:3404465), partial cds Length = 2375 Score = 40.1 bits (20), Expect = 2.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 55 agactggaatatgaataggaaaggcctgaatagaaggatcagta 98 |||||||||||| ||||||| ||| ||| |||||| ||| |||| Sbjct: 1626 agactggaatattaataggagaggtctggatagaaagatgagta 1583 Score = 40.1 bits (20), Expect = 2.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 55 agactggaatatgaataggaaaggcctgaatagaaggatcagta 98 |||||||||||| ||||||| ||| ||| |||||| ||| |||| Sbjct: 1454 agactggaatattaataggagaggtctggatagaaagatgagta 1411
>gb|BC070820.1| Xenopus laevis hypothetical protein MGC83905, mRNA (cDNA clone MGC:83905 IMAGE:6859325), complete cds Length = 3579 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 13 gtccaaattacactagcaaccatgaattgatt 44 |||||||| |||||||||||||| ||||||| Sbjct: 1627 gtccaaatggcactagcaaccatgcattgatt 1658
>gb|BC073378.1| Xenopus laevis GTP-binding protein DRG, mRNA (cDNA clone MGC:80810 IMAGE:5513787), complete cds Length = 1622 Score = 40.1 bits (20), Expect = 2.6 Identities = 42/47 (89%), Gaps = 3/47 (6%) Strand = Plus / Minus Query: 42 attgatttgaata--agactggaatatgaatagga-aaggcctgaat 85 ||||||||||||| ||||||||| |||||||| | ||||||||||| Sbjct: 1516 attgatttgaataagagactggaaaatgaatagtagaaggcctgaat 1470
>gb|AY536368.1| Xenopus laevis alpha fast tropomyosin gene, exons 7 through 9A9' and partial cds, alternatively spliced Length = 5775 Score = 40.1 bits (20), Expect = 2.6 Identities = 58/68 (85%), Gaps = 7/68 (10%) Strand = Plus / Minus Query: 25 ctagcaaccatgaattgattgatttgaata--agactggaatatgaatagga-aaggcct 81 |||||||||||| ||||||||||||| ||||||||||||| |||||| | ||||| Sbjct: 2216 ctagcaaccatg----cattgatttgaataagagactggaatatgtataggagagggcct 2161 Query: 82 gaatagaa 89 |||||||| Sbjct: 2160 gaatagaa 2153
>gb|BC084532.1| Xenopus tropicalis aldo-keto reductase family 1, member B7, mRNA (cDNA clone MGC:89946 IMAGE:7030482), complete cds Length = 1641 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ctggaatatgaataggaaag 77 |||||||||||||||||||| Sbjct: 1298 ctggaatatgaataggaaag 1317
>gb|AC148455.2| Xenopus tropicalis clone CH216-165I8, complete sequence Length = 170350 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 55 agactggaatatgaataggaaagg-cctgaatagaa 89 ||||||| | |||||||||||||| ||||||||||| Sbjct: 157955 agactggtacatgaataggaaaggacctgaatagaa 157920
>gb|AC147924.2| Xenopus tropicalis clone CH216-60D12, complete sequence Length = 186585 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 agactggaatatgaatagga 74 |||||||||||||||||||| Sbjct: 121151 agactggaatatgaatagga 121132
>gb|AC146797.2| Xenopus tropicalis clone CH216-118J4, complete sequence Length = 154944 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 agactggaatatgaatagga 74 |||||||||||||||||||| Sbjct: 30095 agactggaatatgaatagga 30114
>gb|BC059306.1| Xenopus laevis hypothetical protein MGC68967, mRNA (cDNA clone MGC:68967 IMAGE:4959706), complete cds Length = 4047 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/35 (91%), Gaps = 2/35 (5%) Strand = Plus / Minus Query: 42 attgatttgaataaga--ctggaatatgaatagga 74 |||||||| ||||||| ||||||||||||||||| Sbjct: 2827 attgatttcaataagaaactggaatatgaatagga 2793
>gb|BC041211.1| Xenopus laevis serine (or cysteine) proteinase inhibitor, clade C (antithrombin), member 1, mRNA (cDNA clone MGC:52682 IMAGE:4682554), complete cds Length = 2336 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 13 gtccaaattacactagcaaccatgaattgatt 44 ||||||||||| ||||||||||| ||||||| Sbjct: 2122 gtccaaattaccttagcaaccatgcattgatt 2153
>gb|AY225509.1| Xenopus laevis malic enzyme 2 (me2) gene, intron 13; nuclear gene for mitochondrial product Length = 624 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/35 (91%), Gaps = 2/35 (5%) Strand = Plus / Minus Query: 42 attgatttgaataaga--ctggaatatgaatagga 74 |||||||||||||| | ||||||||||||||||| Sbjct: 402 attgatttgaataaaagtctggaatatgaatagga 368
>emb|Z99114.2|BSUB0011 Bacillus subtilis complete genome (section 11 of 21): from 2014895 to 2207855 Length = 192961 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 tggaatatgaataggaaagg 78 |||||||||||||||||||| Sbjct: 98992 tggaatatgaataggaaagg 98973
>emb|X83674.1|XLSSB2 X.laevis SSB2 gene Length = 6981 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 12 ggtccaaattacactagcaaccatgaat 39 |||||| ||||| ||||||||||||||| Sbjct: 2624 ggtccacattaccctagcaaccatgaat 2597
>ref|NM_001011130.1| Xenopus tropicalis aldo-keto reductase family 1, member B7 (akr1b7), mRNA Length = 1641 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ctggaatatgaataggaaag 77 |||||||||||||||||||| Sbjct: 1298 ctggaatatgaataggaaag 1317
>gb|AC151334.2| Xenopus tropicalis clone ISB-32O23, complete sequence Length = 56079 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 55 agactggaatatgaataggaaagg-cctgaatagaa 89 |||||||||| ||||||||| ||| ||||||||||| Sbjct: 18176 agactggaatttgaataggagagggcctgaatagaa 18211
>gb|AC149536.2| Xenopus tropicalis clone ISB-357A10, complete sequence Length = 82647 Score = 40.1 bits (20), Expect = 2.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 58 ctggaatatgaataggaaaggcctgaatagaaggatcagtactaaaaa 105 ||||||||||||| ||| ||||| ||||||| ||| |||| |||||| Sbjct: 12111 ctggaatatgaattggagaggccccaatagaaagataagtagtaaaaa 12064
>gb|AC145796.2| Xenopus tropicalis clone CH216-19K4, complete sequence Length = 140406 Score = 40.1 bits (20), Expect = 2.6 Identities = 59/71 (83%), Gaps = 1/71 (1%) Strand = Plus / Minus Query: 57 actggaatatgaatagga-aaggcctgaatagaaggatcagtactaaaaacttacantaa 115 |||| ||||||||||||| | || |||||||||| ||| |||| |||||| | ||| ||| Sbjct: 9489 actgaaatatgaataggagagggactgaatagaaagataagtaataaaaagtaacaataa 9430 Query: 116 atgtgtagcct 126 | |||||||| Sbjct: 9429 aattgtagcct 9419
>gb|AC149149.3| Xenopus tropicalis clone ISB-175F5, complete sequence Length = 116498 Score = 40.1 bits (20), Expect = 2.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 58 ctggaatatgaataggaaaggcctgaatagaaggatcagtactaaaaa 105 ||||||||||||| ||| ||||| ||||||| ||| |||| |||||| Sbjct: 67953 ctggaatatgaattggagaggccccaatagaaagataagtagtaaaaa 68000
>gb|AC151305.2| Xenopus tropicalis clone CH216-36A20, complete sequence Length = 72789 Score = 40.1 bits (20), Expect = 2.6 Identities = 45/52 (86%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 55 agactggaatatgaatagga-aaggcctgaatagaaggatcagtactaaaaa 105 ||||||||||||| |||||| | || |||||||||| ||| |||| |||||| Sbjct: 7346 agactggaatatgcataggagagggtctgaatagaaagattagtaataaaaa 7397
>gb|AC147908.2| Xenopus tropicalis clone CH216-7L4, complete sequence Length = 183527 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 agactggaatatgaatagga 74 |||||||||||||||||||| Sbjct: 96705 agactggaatatgaatagga 96724
>gb|BC092104.1| Xenopus laevis cDNA clone IMAGE:6950557, partial cds Length = 1074 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ggtccaaattacactagcaaccat 35 |||||||||||| ||||||||||| Sbjct: 874 ggtccaaattaccctagcaaccat 897
>gb|AC155950.2| Xenopus tropicalis clone CH216-103N11, complete sequence Length = 146670 Score = 40.1 bits (20), Expect = 2.6 Identities = 46/55 (83%) Strand = Plus / Plus Query: 61 gaatatgaataggaaaggcctgaatagaaggatcagtactaaaaacttacantaa 115 |||||||||||||| || |||||||||| ||| || | |||||| ||||| ||| Sbjct: 13976 gaatatgaataggagtggtctgaatagaaagataagcaataaaaagttacaataa 14030
>gb|AC147209.2| Xenopus tropicalis clone CH216-50L16, complete sequence Length = 176731 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 agactggaatatgaatagga 74 |||||||||||||||||||| Sbjct: 88324 agactggaatatgaatagga 88343
>gb|AC154300.2| Mus musculus BAC clone RP23-390F4 from 12, complete sequence Length = 187014 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 tctggtaacaaggtccaaat 20 |||||||||||||||||||| Sbjct: 154181 tctggtaacaaggtccaaat 154200
>gb|AC149137.3| Xenopus tropicalis clone CH216-3L19, complete sequence Length = 155697 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 agactggaatatgaatagga 74 |||||||||||||||||||| Sbjct: 121445 agactggaatatgaatagga 121426
>emb|CR761598.2| Xenopus tropicalis finished cDNA, clone TGas090n05 Length = 1570 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 agactggaatatgaatagga 74 |||||||||||||||||||| Sbjct: 681 agactggaatatgaatagga 662
>gb|AC147891.2| Xenopus tropicalis clone CH216-2E23, complete sequence Length = 209003 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 agactggaatatgaatagga 74 |||||||||||||||||||| Sbjct: 200161 agactggaatatgaatagga 200142
>gb|BC077549.1| Xenopus laevis hypothetical LOC494587, mRNA (cDNA clone MGC:83474 IMAGE:3403915), complete cds Length = 3857 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 gtccaaattacactagcaaccatg 36 ||||||||||| |||||||||||| Sbjct: 1342 gtccaaattaccctagcaaccatg 1319
>gb|AF026147.1|AF026147 Bacillus subtilis YojA (yojA), YojB (yojB), YojC (yojC), YojD (yojD), YojE (yojE), YojF (yojF), YojG (yojG), YojH (yojH), YojI (yojI), YojJ (yojJ), YojK (yojK), YojL (yojL), YojM (yojM), YojN (yojN), and YojO (yojO) genes, complete cds; and OdhA (odhA) gene, partial cds Length = 15389 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 tggaatatgaataggaaagg 78 |||||||||||||||||||| Sbjct: 11504 tggaatatgaataggaaagg 11523
>emb|AL954358.5| Zebrafish DNA sequence from clone CH211-226D12, complete sequence Length = 182858 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ttacactagcaaccatgaat 39 |||||||||||||||||||| Sbjct: 98529 ttacactagcaaccatgaat 98510
>dbj|AB024524.1| Xenopus laevis XALDB1 mRNA for aldolase B, complete cds Length = 2447 Score = 40.1 bits (20), Expect = 2.6 Identities = 51/60 (85%), Gaps = 6/60 (10%) Strand = Plus / Minus Query: 14 tccaaattacactagcaaccatgaattgattgatttgaataa--gactggaatatgaata 71 |||||| ||| ||||||||| ||| |||||||||||||| |||||||||||||||| Sbjct: 1997 tccaaactaccctagcaacc----attaattgatttgaataagtgactggaatatgaata 1942 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,402,423 Number of Sequences: 3902068 Number of extensions: 1402423 Number of successful extensions: 86651 Number of sequences better than 10.0: 167 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 25 Number of HSP's that attempted gapping in prelim test: 86253 Number of HSP's gapped (non-prelim): 360 length of query: 207 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 185 effective length of database: 17,147,199,772 effective search space: 3172231957820 effective search space used: 3172231957820 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
