ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4j18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY107838.1| Zea mays PCO112885 mRNA sequence 165 3e-37
2ref|NM_193868.1| Oryza sativa (japonica cultivar-group), predic... 151 4e-33
3dbj|AK103410.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 4e-33
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
5dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
6dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
7gb|AY106222.1| Zea mays PCO112886 mRNA sequence 109 1e-20
8gb|AC084310.16| Mus musculus chromosome 1, clone RP23-10C10, com... 44 0.66
9ref|XM_811067.1| Trypanosoma cruzi strain CL Brener hypothetical... 44 0.66
10ref|XM_816864.1| Trypanosoma cruzi strain CL Brener hypothetical... 44 0.66
11gb|AC093498.3| Drosophila melanogaster 3L BAC RP98-15O8 (Roswell... 44 0.66
12gb|AF242860.1|AF242860 Trypanosoma cruzi clone cosmid 1K19 NPK-1... 44 0.66
13gb|AE003538.4| Drosophila melanogaster chromosome 3L, section 47... 44 0.66
14gb|AC007208.13| Drosophila melanogaster clone BACR05D08, complet... 42 2.6
15gb|AY753025.1| Penaeus monodon clone t516 microsatellite sequence 42 2.6
16gb|AC011070.8| Drosophila melanogaster clone BACR02B12, complete... 42 2.6
17gb|AC099009.2| Drosophila melanogaster clone BACR17M11, complete... 42 2.6
18gb|DQ010542.1| Onchocerca volvulus clone SWmL3CO177 alpha tubuli... 42 2.6
19ref|XM_807992.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 2.6
20emb|AL033375.2|HS21F7 Human DNA sequence from clone RP1-21F7 on ... 42 2.6
21emb|BX571663.1| Wolinella succinogenes, complete genome; segment... 42 2.6
22emb|BX294147.1| Pirellula sp. strain 1 complete genome; segment ... 42 2.6
23emb|BX942833.8| Zebrafish DNA sequence from clone DKEY-177F17 in... 42 2.6
24tpg|BK003145.1| TPA: TPA_inf: Drosophila melanogaster HDC19048 (... 42 2.6
25gb|AC026393.11| Homo sapiens chromosome 10 clone RP11-308N23, co... 42 2.6
26dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.6
27gb|AC022350.2|AC022350 Drosophila melanogaster, chromosome X, re... 42 2.6
28gb|AC012165.6|AC012165 Drosophila melanogaster, chromosome X, re... 42 2.6
29dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.6
30dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.6
31dbj|AK073517.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.6
32dbj|AK066970.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.6
33emb|AJ243113.1|MGR243113 Mycosphaerella graminicola atr2 gene fo... 42 2.6
34gb|AE003670.5| Drosophila melanogaster chromosome 2L, section 79... 42 2.6
35gb|AE003832.4| Drosophila melanogaster chromosome 2R, section 18... 42 2.6
36gb|AE003513.3| Drosophila melanogaster chromosome X, section 65 ... 42 2.6
37gb|AE003503.4| Drosophila melanogaster chromosome X, section 55 ... 42 2.6
38gb|AE003499.5| Drosophila melanogaster chromosome X, section 51 ... 42 2.6
39gb|AC005130.1|AC005130 Drosophila melanogaster, chromosome 2L, r... 42 2.6
40gb|AC005894.1|AC005894 Drosophila melanogaster, chromosome 2R, r... 42 2.6 
>gb|AY107838.1| Zea mays PCO112885 mRNA sequence
          Length = 760

 Score =  165 bits (83), Expect = 3e-37
 Identities = 134/151 (88%)
 Strand = Plus / Minus

                                                                       
Query: 260 tccttcatctggtaatccaccttgaagtcatagtccgcgtccatgtcattcagcacgctg 319
           |||| ||||||||||||||||||||| || ||||||||||||||||| |||||||| |||
Sbjct: 567 tcctccatctggtaatccaccttgaaatcgtagtccgcgtccatgtcgttcagcacactg 508

                                                                       
Query: 320 aacttgttccctttgcgccgcttcttctccgctttcttcttacgggggtcgaggatgccc 379
           ||| ||||| | |||||||| |||||||| |||||| |||| || |||||||| ||||||
Sbjct: 507 aacctgttcgccttgcgccgtttcttctctgctttcctcttgcgagggtcgagtatgccc 448

                                          
Query: 380 tcggcagtgtacagcttgtcgtgctgtgtgc 410
           ||||| ||||||| |||||||| ||||||||
Sbjct: 447 tcggcggtgtacaacttgtcgttctgtgtgc 417



 Score =  151 bits (76), Expect = 4e-33
 Identities = 209/254 (82%)
 Strand = Plus / Minus

                                                                       
Query: 496 atcctcaagcatcgcttcatcaatctctggtggggcattagatggaatttcaatatgact 555
           |||||| |||||| |||| |||||  | ||||| |||||||  ||||| |||||||||  
Sbjct: 325 atcctctagcatctcttcgtcaattgccggtggagcattaggaggaatctcaatatgatg 266

                                                                       
Query: 556 gaaatcctccatagattttagaccactaatatatgaagactcggctttgtaaatttcatc 615
           ||| ||||| || || || | ||||| ||||||||||||||| |||||||||||||||||
Sbjct: 265 gaactcctcaatggacttcaaaccaccaatatatgaagactcagctttgtaaatttcatc 206

                                                                       
Query: 616 aacattaaattcacttccgtcttctgtgataattactgcattggcgtcctccacgacttc 675
           || |||||||||  | || |||||||  ||||| ||| |||  | |||||||||  | ||
Sbjct: 205 aatattaaattctttcccatcttctgatataatcactacatctgagtcctccacagcatc 146

                                                                       
Query: 676 ccttttaggtggcagtgtaaaatanggtaccttgccttcattccagtcatgaatcactat 735
            ||||||||||||||||||||||| ||||  || ||| ||||||||||||||| ||| ||
Sbjct: 145 tcttttaggtggcagtgtaaaatatggtattttacctncattccagtcatgaagcacaat 86

                         
Query: 736 ttttgcagcagctt 749
           | | ||||||||||
Sbjct: 85  tctcgcagcagctt 72
to top
>ref|NM_193868.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1812

 Score =  151 bits (76), Expect = 4e-33
 Identities = 212/255 (83%), Gaps = 2/255 (0%)
 Strand = Plus / Minus

                                                                        
Query: 496  atcctcaagcatcgcttcatcaatctctggtggggcattagatggaatttcaatatgact 555
            |||||| |||||| |||| |||||||  |||||||||||||||||||| ||||| |||| 
Sbjct: 1488 atcctctagcatctcttcgtcaatctgcggtggggcattagatggaatctcaatgtgacg 1429

                                                                        
Query: 556  gaaatcctccatagattttagaccactaatatatgaagactcggctttgtaaatttcatc 615
            ||| |||||||  ||||| ||||||| ||||||||| ||||| |||||||||||||||||
Sbjct: 1428 gaactcctccagtgatttcagaccaccaatatatgatgactcagctttgtaaatttcatc 1369

                                                                        
Query: 616  aacattaaattcacttcc-gtcttctgtgataattactgcattggcgtcctccacgactt 674
            ||  ||||||||  | || ||| ||||  ||||||||||||| || ||| || ||  | |
Sbjct: 1368 aatgttaaattctttcccagtc-tctgaaataattactgcatcggagtcgtctacagcat 1310

                                                                        
Query: 675  cccttttaggtggcagtgtaaaatanggtaccttgccttcattccagtcatgaatcacta 734
            ||||||||||||| |  |||||||| ||||  || || ||||||||||||||||  || |
Sbjct: 1309 cccttttaggtggtaccgtaaaatagggtattttaccctcattccagtcatgaagtacaa 1250

                           
Query: 735  tttttgcagcagctt 749
            || ||||||||||||
Sbjct: 1249 ttcttgcagcagctt 1235



 Score =  125 bits (63), Expect = 2e-25
 Identities = 132/155 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  ggcatccttcatctggtaatccaccttgaagtcatagtccgcgtccatgtcattcagcac 315
            ||||||||||||||| |||||||||||||| || ||||| || ||||||||  |||||||
Sbjct: 1734 ggcatccttcatctgataatccaccttgaaatcgtagtctgcatccatgtcggtcagcac 1675

                                                                        
Query: 316  gctgaacttgttccctttgcgccgcttcttctccgctttcttcttacgggggtcgaggat 375
            ||||||||||||  | ||||||| ||||||||| |||||| |||| || || || || ||
Sbjct: 1674 gctgaacttgtttgccttgcgcctcttcttctcggctttcctcttgcgaggatcaagtat 1615

                                               
Query: 376  gccctcggcagtgtacagcttgtcgtgctgtgtgc 410
             ||||| || |||||||||||||| | ||||||||
Sbjct: 1614 tccctctgctgtgtacagcttgtcattctgtgtgc 1580
to top
>dbj|AK103410.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128E17, full
            insert sequence
          Length = 2243

 Score =  151 bits (76), Expect = 4e-33
 Identities = 212/255 (83%), Gaps = 2/255 (0%)
 Strand = Plus / Minus

                                                                        
Query: 496  atcctcaagcatcgcttcatcaatctctggtggggcattagatggaatttcaatatgact 555
            |||||| |||||| |||| |||||||  |||||||||||||||||||| ||||| |||| 
Sbjct: 1542 atcctctagcatctcttcgtcaatctgcggtggggcattagatggaatctcaatgtgacg 1483

                                                                        
Query: 556  gaaatcctccatagattttagaccactaatatatgaagactcggctttgtaaatttcatc 615
            ||| |||||||  ||||| ||||||| ||||||||| ||||| |||||||||||||||||
Sbjct: 1482 gaactcctccagtgatttcagaccaccaatatatgatgactcagctttgtaaatttcatc 1423

                                                                        
Query: 616  aacattaaattcacttcc-gtcttctgtgataattactgcattggcgtcctccacgactt 674
            ||  ||||||||  | || ||| ||||  ||||||||||||| || ||| || ||  | |
Sbjct: 1422 aatgttaaattctttcccagtc-tctgaaataattactgcatcggagtcgtctacagcat 1364

                                                                        
Query: 675  cccttttaggtggcagtgtaaaatanggtaccttgccttcattccagtcatgaatcacta 734
            ||||||||||||| |  |||||||| ||||  || || ||||||||||||||||  || |
Sbjct: 1363 cccttttaggtggtaccgtaaaatagggtattttaccctcattccagtcatgaagtacaa 1304

                           
Query: 735  tttttgcagcagctt 749
            || ||||||||||||
Sbjct: 1303 ttcttgcagcagctt 1289



 Score =  119 bits (60), Expect = 1e-23
 Identities = 123/144 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  ggcatccttcatctggtaatccaccttgaagtcatagtccgcgtccatgtcattcagcac 315
            ||||||||||||||| |||||||||||||| || ||||| || ||||||||  |||||||
Sbjct: 1788 ggcatccttcatctgataatccaccttgaaatcgtagtctgcatccatgtcggtcagcac 1729

                                                                        
Query: 316  gctgaacttgttccctttgcgccgcttcttctccgctttcttcttacgggggtcgaggat 375
            ||||||||||||  | ||||||| ||||||||| |||||| |||| || || || || ||
Sbjct: 1728 gctgaacttgtttgccttgcgcctcttcttctcggctttcctcttgcgaggatcaagtat 1669

                                    
Query: 376  gccctcggcagtgtacagcttgtc 399
             ||||| || ||||||||||||||
Sbjct: 1668 tccctctgctgtgtacagcttgtc 1645
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  125 bits (63), Expect = 2e-25
 Identities = 132/155 (85%)
 Strand = Plus / Plus

                                                                            
Query: 256      ggcatccttcatctggtaatccaccttgaagtcatagtccgcgtccatgtcattcagcac 315
                ||||||||||||||| |||||||||||||| || ||||| || ||||||||  |||||||
Sbjct: 15444499 ggcatccttcatctgataatccaccttgaaatcgtagtctgcatccatgtcggtcagcac 15444558

                                                                            
Query: 316      gctgaacttgttccctttgcgccgcttcttctccgctttcttcttacgggggtcgaggat 375
                ||||||||||||  | ||||||| ||||||||| |||||| |||| || || || || ||
Sbjct: 15444559 gctgaacttgtttgccttgcgcctcttcttctcggctttcctcttgcgaggatcaagtat 15444618

                                                   
Query: 376      gccctcggcagtgtacagcttgtcgtgctgtgtgc 410
                 ||||| || |||||||||||||| | ||||||||
Sbjct: 15444619 tccctctgctgtgtacagcttgtcattctgtgtgc 15444653



 Score =  123 bits (62), Expect = 9e-25
 Identities = 113/130 (86%)
 Strand = Plus / Plus

                                                                            
Query: 498      cctcaagcatcgcttcatcaatctctggtggggcattagatggaatttcaatatgactga 557
                |||| |||||| |||| |||||||  |||||||||||||||||||| ||||| |||| ||
Sbjct: 15444904 cctctagcatctcttcgtcaatctgcggtggggcattagatggaatctcaatgtgacgga 15444963

                                                                            
Query: 558      aatcctccatagattttagaccactaatatatgaagactcggctttgtaaatttcatcaa 617
                | |||||||  ||||| ||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 15444964 actcctccagtgatttcagaccaccaatatatgatgactcagctttgtaaatttcatcaa 15445023

                          
Query: 618      cattaaattc 627
                  ||||||||
Sbjct: 15445024 tgttaaattc 15445033



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 713      tcattccagtcatgaatcactatttttgcagcagctt 749
                ||||||||||||||||  || ||| ||||||||||||
Sbjct: 15445200 tcattccagtcatgaagtacaattcttgcagcagctt 15445236
to top
>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1111C09
          Length = 156393

 Score =  125 bits (63), Expect = 2e-25
 Identities = 132/155 (85%)
 Strand = Plus / Plus

                                                                        
Query: 256  ggcatccttcatctggtaatccaccttgaagtcatagtccgcgtccatgtcattcagcac 315
            ||||||||||||||| |||||||||||||| || ||||| || ||||||||  |||||||
Sbjct: 2008 ggcatccttcatctgataatccaccttgaaatcgtagtctgcatccatgtcggtcagcac 2067

                                                                        
Query: 316  gctgaacttgttccctttgcgccgcttcttctccgctttcttcttacgggggtcgaggat 375
            ||||||||||||  | ||||||| ||||||||| |||||| |||| || || || || ||
Sbjct: 2068 gctgaacttgtttgccttgcgcctcttcttctcggctttcctcttgcgaggatcaagtat 2127

                                               
Query: 376  gccctcggcagtgtacagcttgtcgtgctgtgtgc 410
             ||||| || |||||||||||||| | ||||||||
Sbjct: 2128 tccctctgctgtgtacagcttgtcattctgtgtgc 2162



 Score =  123 bits (62), Expect = 9e-25
 Identities = 113/130 (86%)
 Strand = Plus / Plus

                                                                        
Query: 498  cctcaagcatcgcttcatcaatctctggtggggcattagatggaatttcaatatgactga 557
            |||| |||||| |||| |||||||  |||||||||||||||||||| ||||| |||| ||
Sbjct: 2413 cctctagcatctcttcgtcaatctgcggtggggcattagatggaatctcaatgtgacgga 2472

                                                                        
Query: 558  aatcctccatagattttagaccactaatatatgaagactcggctttgtaaatttcatcaa 617
            | |||||||  ||||| ||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 2473 actcctccagtgatttcagaccaccaatatatgatgactcagctttgtaaatttcatcaa 2532

                      
Query: 618  cattaaattc 627
              ||||||||
Sbjct: 2533 tgttaaattc 2542



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 713  tcattccagtcatgaatcactatttttgcagcagctt 749
            ||||||||||||||||  || ||| ||||||||||||
Sbjct: 2709 tcattccagtcatgaagtacaattcttgcagcagctt 2745
to top
>dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1045D11
          Length = 142320

 Score =  125 bits (63), Expect = 2e-25
 Identities = 132/155 (85%)
 Strand = Plus / Plus

                                                                          
Query: 256    ggcatccttcatctggtaatccaccttgaagtcatagtccgcgtccatgtcattcagcac 315
              ||||||||||||||| |||||||||||||| || ||||| || ||||||||  |||||||
Sbjct: 122040 ggcatccttcatctgataatccaccttgaaatcgtagtctgcatccatgtcggtcagcac 122099

                                                                          
Query: 316    gctgaacttgttccctttgcgccgcttcttctccgctttcttcttacgggggtcgaggat 375
              ||||||||||||  | ||||||| ||||||||| |||||| |||| || || || || ||
Sbjct: 122100 gctgaacttgtttgccttgcgcctcttcttctcggctttcctcttgcgaggatcaagtat 122159

                                                 
Query: 376    gccctcggcagtgtacagcttgtcgtgctgtgtgc 410
               ||||| || |||||||||||||| | ||||||||
Sbjct: 122160 tccctctgctgtgtacagcttgtcattctgtgtgc 122194



 Score =  123 bits (62), Expect = 9e-25
 Identities = 113/130 (86%)
 Strand = Plus / Plus

                                                                          
Query: 498    cctcaagcatcgcttcatcaatctctggtggggcattagatggaatttcaatatgactga 557
              |||| |||||| |||| |||||||  |||||||||||||||||||| ||||| |||| ||
Sbjct: 122445 cctctagcatctcttcgtcaatctgcggtggggcattagatggaatctcaatgtgacgga 122504

                                                                          
Query: 558    aatcctccatagattttagaccactaatatatgaagactcggctttgtaaatttcatcaa 617
              | |||||||  ||||| ||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 122505 actcctccagtgatttcagaccaccaatatatgatgactcagctttgtaaatttcatcaa 122564

                        
Query: 618    cattaaattc 627
                ||||||||
Sbjct: 122565 tgttaaattc 122574



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 713    tcattccagtcatgaatcactatttttgcagcagctt 749
              ||||||||||||||||  || ||| ||||||||||||
Sbjct: 122741 tcattccagtcatgaagtacaattcttgcagcagctt 122777
to top
>gb|AY106222.1| Zea mays PCO112886 mRNA sequence
          Length = 1017

 Score =  109 bits (55), Expect = 1e-20
 Identities = 204/254 (80%)
 Strand = Plus / Minus

                                                                       
Query: 496 atcctcaagcatcgcttcatcaatctctggtggggcattagatggaatttcaatatgact 555
           |||||| |||||| ||||||| ||| | ||||| |||||||  ||||| |||||||||  
Sbjct: 666 atcctctagcatctcttcatcgatcgccggtggagcattaggaggaatctcaatatgatg 607

                                                                       
Query: 556 gaaatcctccatagattttagaccactaatatatgaagactcggctttgtaaatttcatc 615
           ||| ||||| || || || | ||||| |||||||||||| || ||||||||||| |||||
Sbjct: 606 gaactcctcaatggacttcaaaccaccaatatatgaagattcagctttgtaaatatcatc 547

                                                                       
Query: 616 aacattaaattcacttccgtcttctgtgataattactgcattggcgtcctccacgacttc 675
            | |||||||||  | || || || |  ||||| |||||||  | ||||||| |  | ||
Sbjct: 546 gatattaaattctttcccatcctcggatataatcactgcatctgagtcctccccagcatc 487

                                                                       
Query: 676 ccttttaggtggcagtgtaaaatanggtaccttgccttcattccagtcatgaatcactat 735
            |||||||| |||||||||||||| ||||  || ||||||||||||||||||| ||| ||
Sbjct: 486 tcttttaggcggcagtgtaaaatatggtattttaccttcattccagtcatgaagcacaat 427

                         
Query: 736 ttttgcagcagctt 749
           | | || |||||||
Sbjct: 426 tctcgctgcagctt 413



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 116/139 (83%)
 Strand = Plus / Minus

                                                                       
Query: 272 taatccaccttgaagtcatagtccgcgtccatgtcattcagcacgctgaacttgttccct 331
           |||||||||||||| || ||||||||||||||||| |||||| |||||  | || || | 
Sbjct: 905 taatccaccttgaaatcgtagtccgcgtccatgtcgttcagcgcgctgggcctgctcgcc 846

                                                                       
Query: 332 ttgcgccgcttcttctccgctttcttcttacgggggtcgaggatgccctcggcagtgtac 391
           |||||||| |||||||| |||||  |||| || |||||||| | || |||||| ||||||
Sbjct: 845 ttgcgccgtttcttctctgctttgctcttgcgagggtcgagtacgctctcggcggtgtac 786

                              
Query: 392 agcttgtcgtgctgtgtgc 410
           | |||||||| ||| ||||
Sbjct: 785 aacttgtcgttctgcgtgc 767
to top
>gb|AC084310.16| Mus musculus chromosome 1, clone RP23-10C10, complete sequence
          Length = 194800

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 219    tgacatcgccatcgccatcttcatcg 244
              |||||||||||||||| |||||||||
Sbjct: 127479 tgacatcgccatcgccctcttcatcg 127454
to top
>ref|XM_811067.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053510885.160) partial mRNA
          Length = 4263

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 308  ttcagcacgctgaacttgttcc 329
            ||||||||||||||||||||||
Sbjct: 2973 ttcagcacgctgaacttgttcc 2952
to top
>ref|XM_816864.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506529.250) partial mRNA
          Length = 4275

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 308  ttcagcacgctgaacttgttcc 329
            ||||||||||||||||||||||
Sbjct: 2985 ttcagcacgctgaacttgttcc 2964
to top
>gb|AC093498.3| Drosophila melanogaster 3L BAC RP98-15O8 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 160931

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 223   atcgccatcgccatcttcatcgtccgcagg 252
             ||||||||||||||| |||||||| |||||
Sbjct: 70601 atcgccatcgccatcatcatcgtcagcagg 70572
to top
>gb|AF242860.1|AF242860 Trypanosoma cruzi clone cosmid 1K19 NPK-1 protein kinase-like protein
             gene, complete cds; and unknown genes
          Length = 39465

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 308   ttcagcacgctgaacttgttcc 329
             ||||||||||||||||||||||
Sbjct: 30794 ttcagcacgctgaacttgttcc 30773
to top
>gb|AE003538.4| Drosophila melanogaster chromosome 3L, section 47 of 83 of the complete
              sequence
          Length = 303314

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 223    atcgccatcgccatcttcatcgtccgcagg 252
              ||||||||||||||| |||||||| |||||
Sbjct: 157753 atcgccatcgccatcatcatcgtcagcagg 157782
to top
>gb|AC007208.13| Drosophila melanogaster clone BACR05D08, complete sequence
          Length = 172190

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 669   cgacttcccttttaggtggcagtgt 693
             ||||| |||||||||||||||||||
Sbjct: 41931 cgactgcccttttaggtggcagtgt 41907
to top
>gb|AY753025.1| Penaeus monodon clone t516 microsatellite sequence
          Length = 623

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 222 catcgccatcgccatcttcatcgtc 246
           |||||||||||||||| ||||||||
Sbjct: 317 catcgccatcgccatcgtcatcgtc 341
to top
>gb|AC011070.8| Drosophila melanogaster clone BACR02B12, complete sequence
          Length = 168850

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 222    catcgccatcgccatcttcatcgtc 246
              |||||||||||||||| ||||||||
Sbjct: 109768 catcgccatcgccatcgtcatcgtc 109792
to top
>gb|AC099009.2| Drosophila melanogaster clone BACR17M11, complete sequence
          Length = 188872

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 222    catcgccatcgccatcttcatcgtc 246
              |||||||||||||||| ||||||||
Sbjct: 182069 catcgccatcgccatcgtcatcgtc 182045
to top
>gb|DQ010542.1| Onchocerca volvulus clone SWmL3CO177 alpha tubulin mRNA, complete cds
          Length = 1353

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 195  cttcgccttcaccttcgcctt 215
            |||||||||||||||||||||
Sbjct: 1339 cttcgccttcaccttcgcctt 1319
to top
>ref|XM_807992.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053507017.60) partial mRNA
          Length = 1719

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 222  catcgccatcgccatcttcatcgtc 246
            |||||||||||||||| ||||||||
Sbjct: 1475 catcgccatcgccatcgtcatcgtc 1499
to top
>emb|AL033375.2|HS21F7 Human DNA sequence from clone RP1-21F7 on chromosome 6q16.1-21 Contains
              the 5' end of the gene for a novel protein (KIAA1900) and a
              CpG island, complete sequence
          Length = 150789

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 195    cttcgccttcaccttcgcctt 215
              |||||||||||||||||||||
Sbjct: 126130 cttcgccttcaccttcgcctt 126150
to top
>emb|BX571663.1| Wolinella succinogenes, complete genome; segment 7/7
          Length = 19534

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 199  gccttcaccttcgcctttgct 219
            |||||||||||||||||||||
Sbjct: 7246 gccttcaccttcgcctttgct 7266
to top
>emb|BX294147.1| Pirellula sp. strain 1 complete genome; segment 15/24
          Length = 314450

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 193    ttcttcgccttcaccttcgcc 213
              |||||||||||||||||||||
Sbjct: 144643 ttcttcgccttcaccttcgcc 144623
to top
>emb|BX942833.8| Zebrafish DNA sequence from clone DKEY-177F17 in linkage group 20
             Contains part of the gene for a novel protein similar to
             rat kinase D-interacting substance of 220 kDa
             (RGD:619949), complete sequence
          Length = 42729

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 567   tagattttagaccactaatat 587
             |||||||||||||||||||||
Sbjct: 14748 tagattttagaccactaatat 14768
to top
>tpg|BK003145.1| TPA: TPA_inf: Drosophila melanogaster HDC19048 (HDC19048) gene,
           complete cds
          Length = 2695

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 222 catcgccatcgccatcttcatcgtc 246
           |||||||||||||||| ||||||||
Sbjct: 557 catcgccatcgccatcgtcatcgtc 533
to top
>gb|AC026393.11| Homo sapiens chromosome 10 clone RP11-308N23, complete sequence
          Length = 84208

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 38    aaaatctcctgccaattgttg 58
             |||||||||||||||||||||
Sbjct: 50546 aaaatctcctgccaattgttg 50566
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 195     cttcgccttcaccttcgcctt 215
               |||||||||||||||||||||
Sbjct: 6612720 cttcgccttcaccttcgcctt 6612740
to top
>gb|AC022350.2|AC022350 Drosophila melanogaster, chromosome X, region 15B-15B, BAC clone
             BACR18G21, complete sequence
          Length = 168514

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 222   catcgccatcgccatcttcatcgtc 246
             |||||||||||||||| ||||||||
Sbjct: 51971 catcgccatcgccatcgtcatcgtc 51995
to top
>gb|AC012165.6|AC012165 Drosophila melanogaster, chromosome X, region 18F-18F, BAC clone
              BACR48P17, complete sequence
          Length = 176195

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 222    catcgccatcgccatcttcatcgtc 246
              |||||||||||||||| ||||||||
Sbjct: 172498 catcgccatcgccatcgtcatcgtc 172522
to top
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0425F05
          Length = 162858

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 195   cttcgccttcaccttcgcctt 215
             |||||||||||||||||||||
Sbjct: 46846 cttcgccttcaccttcgcctt 46866
to top
>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0690H04
          Length = 137319

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 195    cttcgccttcaccttcgcctt 215
              |||||||||||||||||||||
Sbjct: 129096 cttcgccttcaccttcgcctt 129116
to top
>dbj|AK073517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040I03, full
           insert sequence
          Length = 2636

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 195 cttcgccttcaccttcgcctt 215
           |||||||||||||||||||||
Sbjct: 401 cttcgccttcaccttcgcctt 381
to top
>dbj|AK066970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089B21, full
           insert sequence
          Length = 2977

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 195 cttcgccttcaccttcgcctt 215
           |||||||||||||||||||||
Sbjct: 353 cttcgccttcaccttcgcctt 333
to top
>emb|AJ243113.1|MGR243113 Mycosphaerella graminicola atr2 gene for ABC transporter exons 1-8
          Length = 6714

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 340  cttcttctccgctttcttctt 360
            |||||||||||||||||||||
Sbjct: 6177 cttcttctccgctttcttctt 6157
to top
>gb|AE003670.5| Drosophila melanogaster chromosome 2L, section 79 of 83 of the complete
             sequence
          Length = 258711

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 669   cgacttcccttttaggtggcagtgt 693
             ||||| |||||||||||||||||||
Sbjct: 71006 cgactgcccttttaggtggcagtgt 70982
to top
>gb|AE003832.4| Drosophila melanogaster chromosome 2R, section 18 of 73 of the complete
              sequence
          Length = 242171

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 222    catcgccatcgccatcttcatcgtc 246
              |||||||||||||||| ||||||||
Sbjct: 180826 catcgccatcgccatcgtcatcgtc 180802
to top
>gb|AE003513.3| Drosophila melanogaster chromosome X, section 65 of 74 of the complete
              sequence
          Length = 207432

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 222    catcgccatcgccatcttcatcgtc 246
              |||||||||||||||| ||||||||
Sbjct: 192637 catcgccatcgccatcgtcatcgtc 192661
to top
>gb|AE003503.4| Drosophila melanogaster chromosome X, section 55 of 74 of the complete
             sequence
          Length = 300468

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 222   catcgccatcgccatcttcatcgtc 246
             |||||||||||||||| ||||||||
Sbjct: 36410 catcgccatcgccatcgtcatcgtc 36434
to top
>gb|AE003499.5| Drosophila melanogaster chromosome X, section 51 of 74 of the complete
              sequence
          Length = 300896

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 222    catcgccatcgccatcttcatcgtc 246
              |||||||||||||||| ||||||||
Sbjct: 133460 catcgccatcgccatcgtcatcgtc 133436
to top
>gb|AC005130.1|AC005130 Drosophila melanogaster, chromosome 2L, region 39C1-39D1, P1 clone
             DS01560, complete sequence
          Length = 84395

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 669   cgacttcccttttaggtggcagtgt 693
             ||||| |||||||||||||||||||
Sbjct: 73715 cgactgcccttttaggtggcagtgt 73691
to top
>gb|AC005894.1|AC005894 Drosophila melanogaster, chromosome 2R, region 46A1-46B2, P1 clones
              DS00050, DS00191, and DS05369, complete sequence
          Length = 196337

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 222    catcgccatcgccatcttcatcgtc 246
              |||||||||||||||| ||||||||
Sbjct: 177491 catcgccatcgccatcgtcatcgtc 177467


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,858,942
Number of Sequences: 3902068
Number of extensions: 5858942
Number of successful extensions: 112163
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111967
Number of HSP's gapped (non-prelim): 196
length of query: 751
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 728
effective length of database: 17,143,297,704
effective search space: 12480320728512
effective search space used: 12480320728512
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
to top