ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags4j14 |
|---|---|
| Clone Library Name | barley_pub |
>USF_AQUPY (P46209) Protein usf| Length = 231 Score = 66.6 bits (161), Expect = 6e-11 Identities = 43/116 (37%), Positives = 60/116 (51%), Gaps = 4/116 (3%) Frame = -2 Query: 623 QASVKWLKE---NGSPKVGVTGYCMGGALAIASGVLVPE-VDAVVAFYGTPSSELADTSK 456 +ASV +LKE KVGVTG+C GG L++ P+ +DA V FYG P D Sbjct: 95 KASVDFLKECRYTSPKKVGVTGFCCGGTLSMYFAGKFPDLIDASVPFYGLPQITKIDAEN 154 Query: 455 AQAPIQAHFGELDSFVGFADVTAAKSLEEKLKASGVAHEVHIYPGCSHAFMNASPE 288 + PI E D FV +V + +K+ +GV +V +Y G +HAF+N E Sbjct: 155 IKVPIFFILAEKDEFVNNDEVI---DIAKKVWKNGVDVKVKVYSGVTHAFLNEKRE 207
>DLHH_AQUAE (O67802) Putative carboxymethylenebutenolidase (EC 3.1.1.45)| (Dienelactone hydrolase) (DLH) Length = 231 Score = 63.5 bits (153), Expect = 5e-10 Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 4/116 (3%) Frame = -2 Query: 623 QASVKWLKE---NGSPKVGVTGYCMGGALAIASGVLVPE-VDAVVAFYGTPSSELADTSK 456 QASV+++KE KVG+TG+C GG LA+ PE VDA + FYG P + Sbjct: 95 QASVEFVKECRYTYPKKVGITGFCCGGTLAMYFAAKFPEMVDASLPFYGLPQLTQINAEN 154 Query: 455 AQAPIQAHFGELDSFVGFADVTAAKSLEEKLKASGVAHEVHIYPGCSHAFMNASPE 288 + PI E D FV +V + + + +GV +V ++ G +HAF+N E Sbjct: 155 IKVPIFFILAEKDEFVNNDEVI---DIAKTVWKNGVDVQVKVFSGVTHAFLNEKRE 207
>DLHH_SYNY3 (P73163) Putative carboxymethylenebutenolidase (EC 3.1.1.45)| (Dienelactone hydrolase) (DLH) Length = 246 Score = 53.5 bits (127), Expect = 5e-07 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 12/122 (9%) Frame = -2 Query: 635 IKDIQASVKWLKE--NGSPK-VGVTGYCMGGALAIASGVLVPEVDAVVAFYG-------- 489 + D++A++ + + N P+ VG+ G+C GG + + G +P V A +FYG Sbjct: 100 LSDLEATIAYAQTLPNVKPEEVGLIGFCFGGWI-VYLGASLPTVKATASFYGAGIPHWAP 158 Query: 488 -TPSSELADTSKAQAPIQAHFGELDSFVGFADVTAAKSLEEKLKASGVAHEVHIYPGCSH 312 T + T K Q + A FG D+ + AD + +E+ L V H++ YPG H Sbjct: 159 GTAEPPITYTDKIQGTLYAFFGLEDTSIPMADT---EQIEQALTKYQVNHKIFRYPGADH 215 Query: 311 AF 306 F Sbjct: 216 GF 217
>DLHH_SULSO (P95862) Putative carboxymethylenebutenolidase (EC 3.1.1.45)| (Dienelactone hydrolase) (DLH) Length = 257 Score = 53.1 bits (126), Expect = 7e-07 Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 2/149 (1%) Frame = -2 Query: 635 IKDIQASVKWLKENGSPKVGVTGYCMGGALAIASGVLVPEVDAVVAFYGTPSSELADTSK 456 IKD + +++ G K+ G+CMGG LA VP +D + FYG L K Sbjct: 124 IKDAIKAYEYVSSQGVKKIVSMGFCMGGGLAFQLATEVP-LDGTIVFYGRNPQPLEAIQK 182 Query: 455 AQAPIQAHFGELDSFV--GFADVTAAKSLEEKLKASGVAHEVHIYPGCSHAFMNASPEAL 282 + PI + D + G D+ +A +K E+ IYPG HAF N + Sbjct: 183 IKGPILGLYAGEDPPIDAGLPDLISAIIKYKK------DLELKIYPGAYHAFFNDRGRSY 236 Query: 281 ERRKGMGLTDENQGAIDLAWSRFSTWMGR 195 N+ A + AW R +++ R Sbjct: 237 -----------NKEAAEDAWERVKSFLRR 254
>DLHH_ECO57 (Q8X8L4) Putative carboxymethylenebutenolidase (EC 3.1.1.45)| (Dienelactone hydrolase) (DLH) Length = 271 Score = 50.8 bits (120), Expect = 3e-06 Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 11/121 (9%) Frame = -2 Query: 635 IKDIQASVKWLKENGSP--KVGVTGYCMGGALAIASGVLVPEVDAVVAFYG--------- 489 + D+ W NG ++ +TG+C GG + P++ A VA+YG Sbjct: 121 LADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLN 180 Query: 488 TPSSELADTSKAQAPIQAHFGELDSFVGFADVTAAKSLEEKLKASGVAHEVHIYPGCSHA 309 +P + + AP+ +G LD+ + V +++ + L+A+ E+ +YP HA Sbjct: 181 SPKQPVDIATDLNAPVLGLYGGLDNSIPQESV---ETMRQALRAANAKAEIIVYPDAGHA 237 Query: 308 F 306 F Sbjct: 238 F 238
>DLHH_SALTY (Q9L6M9) Putative carboxymethylenebutenolidase (EC 3.1.1.45)| (Dienelactone hydrolase) (DLH) Length = 270 Score = 50.1 bits (118), Expect = 6e-06 Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 11/161 (6%) Frame = -2 Query: 635 IKDIQASVKWLKENGSP--KVGVTGYCMGGALAIASGVLVPEVDAVVAFYG--------- 489 + D+ W NG ++ +TG+C GG + P++ A VA+YG Sbjct: 121 LADLDHVASWASRNGGDAHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLVGDTSLN 180 Query: 488 TPSSELADTSKAQAPIQAHFGELDSFVGFADVTAAKSLEEKLKASGVAHEVHIYPGCSHA 309 +P + + AP+ +G D+ + V +++ + L+A+ E+ +YP HA Sbjct: 181 SPKHPVDIATDLNAPVLGLYGGQDTSIPQESV---ETMRQALRAANAKAEIVVYPDAGHA 237 Query: 308 FMNASPEALERRKGMGLTDENQGAIDLAWSRFSTWMGRFLG 186 F NA + R G G W R W ++ G Sbjct: 238 F-NA-----DYRPGYHEASAKDG-----WQRMLEWFAQYGG 267
>DLHH_METEX (P71505) Putative carboxymethylenebutenolidase precursor (EC| 3.1.1.45) (Dienelactone hydrolase) (DLH) Length = 291 Score = 48.9 bits (115), Expect = 1e-05 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 12/122 (9%) Frame = -2 Query: 635 IKDIQASVKWLKENG---SPKVGVTGYCMGGALAIASGVLVPEVDAVVAFYG-------- 489 + D+ A+V + K G + ++G+TG+C GG + P V A VA+YG Sbjct: 143 MSDLDAAVAFAKGTGKADTARLGITGFCWGGRITWLYAAHNPAVKAGVAWYGRLVGDSSA 202 Query: 488 -TPSSELADTSKAQAPIQAHFGELDSFVGFADVTAAKSLEEKLKASGVAHEVHIYPGCSH 312 P + + + +AP+ +G D + A + K E +A+G + +YP H Sbjct: 203 LMPKNPVDVAADLKAPVLGLYGGADQGIPVATIDRMK---EACRAAGKTCDFVVYPEAGH 259 Query: 311 AF 306 AF Sbjct: 260 AF 261
>DLHH_ECOLI (P56262) Putative carboxymethylenebutenolidase (EC 3.1.1.45)| (Dienelactone hydrolase) (DLH) Length = 271 Score = 48.9 bits (115), Expect = 1e-05 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 11/121 (9%) Frame = -2 Query: 635 IKDIQASVKWLKENGSP--KVGVTGYCMGGALAIASGVLVPEVDAVVAFYG--------- 489 + D+ W NG ++ +TG+C GG + P++ A VA+YG Sbjct: 121 LADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLN 180 Query: 488 TPSSELADTSKAQAPIQAHFGELDSFVGFADVTAAKSLEEKLKASGVAHEVHIYPGCSHA 309 +P + + API +G D+ + V +++ + L+A+ E+ +YP HA Sbjct: 181 SPKQPVDIATDLNAPILGLYGGQDNSIPQESV---ETMRQALRAANAKAEIIVYPDAGHA 237 Query: 308 F 306 F Sbjct: 238 F 238
>CLCD_PSESB (P0A115) Carboxymethylenebutenolidase (EC 3.1.1.45) (Dienelactone| hydrolase) (DLH) Length = 236 Score = 47.8 bits (112), Expect = 3e-05 Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 6/125 (4%) Frame = -2 Query: 650 DWPGAIKDIQASVKWLKEN--GSPKVGVTGYCMGGALAI---ASGVLVPEVDAVVAFYGT 486 D + D++A++++ + + KVG+ GYC+GGALA A G VD V +YG Sbjct: 92 DMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKGY----VDRAVGYYGV 147 Query: 485 P-SSELADTSKAQAPIQAHFGELDSFVGFADVTAAKSLEEKLKASGVAHEVHIYPGCSHA 309 +L + + P H G D FV + + + E A+ + +VH Y H+ Sbjct: 148 GLEKQLKKVPEVKHPALFHMGGQDHFV---PAPSRQLITEGFGANPLL-QVHWYEEAGHS 203 Query: 308 FMNAS 294 F S Sbjct: 204 FARTS 208
>CLCD_PSEPU (P0A114) Carboxymethylenebutenolidase (EC 3.1.1.45) (Dienelactone| hydrolase) (DLH) Length = 236 Score = 47.8 bits (112), Expect = 3e-05 Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 6/125 (4%) Frame = -2 Query: 650 DWPGAIKDIQASVKWLKEN--GSPKVGVTGYCMGGALAI---ASGVLVPEVDAVVAFYGT 486 D + D++A++++ + + KVG+ GYC+GGALA A G VD V +YG Sbjct: 92 DMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKGY----VDRAVGYYGV 147 Query: 485 P-SSELADTSKAQAPIQAHFGELDSFVGFADVTAAKSLEEKLKASGVAHEVHIYPGCSHA 309 +L + + P H G D FV + + + E A+ + +VH Y H+ Sbjct: 148 GLEKQLKKVPEVKHPALFHMGGQDHFV---PAPSRQLITEGFGANPLL-QVHWYEEAGHS 203 Query: 308 FMNAS 294 F S Sbjct: 204 FARTS 208
>DLHH_SALTI (Q8Z3B8) Putative carboxymethylenebutenolidase (EC 3.1.1.45)| (Dienelactone hydrolase) (DLH) Length = 270 Score = 47.8 bits (112), Expect = 3e-05 Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 11/161 (6%) Frame = -2 Query: 635 IKDIQASVKWLKENGSP--KVGVTGYCMGGALAIASGVLVPEVDAVVAFYG--------- 489 + D+ W NG ++ +TG+C GG + P++ A VA+YG Sbjct: 121 LADLDHVASWASRNGGDAHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLVGDTSLN 180 Query: 488 TPSSELADTSKAQAPIQAHFGELDSFVGFADVTAAKSLEEKLKASGVAHEVHIYPGCSHA 309 +P + + AP+ + D+ + V +++ + L+A+ E+ +YP HA Sbjct: 181 SPKHPVDIATDLNAPVLGLYSGQDTSIPQESV---ETMRQALRAANAKAEIVVYPDAGHA 237 Query: 308 FMNASPEALERRKGMGLTDENQGAIDLAWSRFSTWMGRFLG 186 F NA + R G G W R W ++ G Sbjct: 238 F-NA-----DYRPGYHEASAKDG-----WQRMLEWFAQYGG 267
>DLHH_YERPE (Q8ZAL4) Putative carboxymethylenebutenolidase (EC 3.1.1.45)| (Dienelactone hydrolase) (DLH) Length = 267 Score = 46.2 bits (108), Expect = 9e-05 Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 11/119 (9%) Frame = -2 Query: 629 DIQASVKWLKENG--SPKVGVTGYCMGGALAIASGVLVPEVDAVVAFYG---------TP 483 D+ + W +G + K+ +TG+C GG +A P++ A VA+YG P Sbjct: 113 DLDHTAHWASRHGGDTKKLAITGFCWGGRIAWLYAAHNPQLKAAVAWYGKLVGEKTLFLP 172 Query: 482 SSELADTSKAQAPIQAHFGELDSFVGFADVTAAKSLEEKLKASGVAHEVHIYPGCSHAF 306 + AP+ +G D+ + + +++ + L+A+ E+ +YP HAF Sbjct: 173 KYPVDVAIDLCAPVLGLYGGKDTSIPAEHI---ETMRQALRAANADAEIIVYPEAGHAF 228
>CLCD_RHOOP (O67988) Carboxymethylenebutenolidase (EC 3.1.1.45) (Dienelactone| hydrolase) (DLH) Length = 252 Score = 39.3 bits (90), Expect = 0.010 Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 16/169 (9%) Frame = -2 Query: 638 AIKDIQASVKWLKENGSPKVGVTGYCMGGALAIASGVLVPEVDAVVAFY-----GTPSSE 474 AI+DI+ +V ++ GV G+C+GG+ A+ + P + V A Y G P ++ Sbjct: 102 AIEDIERTVAHTVDD-QQTFGVLGFCLGGSFALLTAAAHP--NQVTATYYAFPKGAPGAK 158 Query: 473 ------LADTSKAQAPIQAHFGELDSFVGFADVTAAKSLEEKLKASGVAHEVHIYPGCSH 312 L P+ H+G D + D LE+ L ++ E+ Y H Sbjct: 159 VPVKPPLEAADAIDGPVLCHWGRDD----YIDHEEIDQLEQILASAPGPSEIRWYDNAGH 214 Query: 311 AFMNASPEALERRKGMGLTDENQ---GAIDLAWSRFSTWMGRFL--GSA 180 +F+ GLT+ N A +W R + R+L GSA Sbjct: 215 SFL------------AGLTEPNHPSTAAAHDSWQRTVEFFERYLTVGSA 251
>TFDE1_RALEJ (P27136) Carboxymethylenebutenolidase 1 (EC 3.1.1.45)| (Carboxymethylenebutenolidase I) (Dienelactone hydrolase I) (DLH I) Length = 234 Score = 38.1 bits (87), Expect = 0.023 Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 7/126 (5%) Frame = -2 Query: 650 DWPGAIKDIQASVKWLK----ENGSPKVGVTGYCMGGALA--IASGVLVPEVDAVVAFYG 489 D + D+ ++++ + NG +V V GYC+GGALA +A+ L D + +YG Sbjct: 92 DMEAGVNDLSCAIEYARALPFSNG--RVAVVGYCLGGALAFDVAARSL---ADCSIGYYG 146 Query: 488 TPSSELADTSKA-QAPIQAHFGELDSFVGFADVTAAKSLEEKLKASGVAHEVHIYPGCSH 312 + A P H G D +V A+S+ E+ +H YP H Sbjct: 147 VGLEKKVSLVPAITRPAMFHMGTKDHYV----TEEARSILEEHFGRNKNLSLHWYP-VGH 201 Query: 311 AFMNAS 294 +F +S Sbjct: 202 SFARSS 207
>DLHH_AZOBR (Q43914) Putative carboxymethylenebutenolidase (EC 3.1.1.45)| (Dienelactone hydrolase) (DLH) Length = 231 Score = 36.2 bits (82), Expect = 0.088 Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 8/90 (8%) Frame = -2 Query: 512 DAVVAFYGTPSSELA-DTSKAQAPIQAHFGELDSFVGFADVTAAKSLEEKLKASGVAHEV 336 DA V++YG L + + P+ H E D FV A++ E+ L A V Sbjct: 137 DANVSYYGVGLDGLVGEAASITKPLLMHIAEKDQFV------PAEAREKVLAAVKGNPNV 190 Query: 335 --HIYPGCSHAFMNA-----SPEALERRKG 267 H+YPG HAF A PEA E G Sbjct: 191 TAHVYPGVDHAFARAGGAHFEPEAAELANG 220
>YAE9_YEAST (P39721) Protein YAL049C| Length = 246 Score = 35.0 bits (79), Expect = 0.20 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 6/115 (5%) Frame = -2 Query: 632 KDIQASVKWLKENGSPK-VGVTGYCMGGALAIA-----SGVLVPEVDAVVAFYGTPSSEL 471 K + +K LK PK +GV GYC G A+ G+ A +F E Sbjct: 106 KIVDGFMKLLKLEYDPKFIGVVGYCFGAKFAVQHISGDGGLANAAAIAHPSFVSIEEIEA 165 Query: 470 ADTSKAQAPIQAHFGELDSFVGFADVTAAKSLEEKLKASGVAHEVHIYPGCSHAF 306 D+ K PI E D EEKLK + +++ ++ G +H F Sbjct: 166 IDSKK---PILISAAEEDHIF---PANLRHLTEEKLKDNHATYQLDLFSGVAHGF 214
>LP61_EIMTE (P15714) Antigen LPMC-61 (Fragment)| Length = 255 Score = 34.7 bits (78), Expect = 0.26 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 383 WPR*HLQIQQNCQAPQNEPGLEPEPWKYQQ 472 WP H Q QQ Q PQ +P ++ E W QQ Sbjct: 66 WPEQHQQAQQQQQWPQQQPQMQQEQWPQQQ 95
>IORA_PYRKO (O07835) Indolepyruvate oxidoreductase subunit iorA (EC 1.2.7.8)| (IOR) (Indolepyruvate ferredoxin oxidoreductase alpha subunit) Length = 647 Score = 34.3 bits (77), Expect = 0.34 Identities = 29/99 (29%), Positives = 40/99 (40%) Frame = -2 Query: 554 GALAIASGVLVPEVDAVVAFYGTPSSELADTSKAQAPIQAHFGELDSFVGFADVTAAKSL 375 G AIA G L + A+ GTPSSEL DT A A + E + A TA + Sbjct: 21 GNHAIARGALEANIAVFAAYPGTPSSELTDTMAAVAKKAGVYMEYSTNEKVAFETALAAA 80 Query: 374 EEKLKASGVAHEVHIYPGCSHAFMNASPEALERRKGMGL 258 L+A H +N + ++ GMG+ Sbjct: 81 WSGLRA---------MTAMKHVGLNVAADSFLSSVGMGV 110
>IORA_ARCFU (O28783) Indolepyruvate oxidoreductase subunit iorA (EC 1.2.7.8)| (IOR) (Indolepyruvate ferredoxin oxidoreductase alpha subunit) Length = 623 Score = 33.5 bits (75), Expect = 0.57 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = -2 Query: 554 GALAIASGVLVPEVDAVVAFYGTPSSELADT 462 G AIA G + +D A+ GTPSSE+ADT Sbjct: 18 GNEAIARGAIEAGIDVFAAYPGTPSSEIADT 48
>FLAD2_RHIME (Q52942) Flagellin D| Length = 395 Score = 33.5 bits (75), Expect = 0.57 Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 4/101 (3%) Frame = -2 Query: 569 GYCMGGALAIASGVLVPEVDAV----VAFYGTPSSELADTSKAQAPIQAHFGELDSFVGF 402 G G A+A GV +V+ V VA G P E+A + A API A +D+ G Sbjct: 221 GAVFQGNYALAGGVNYVKVEGVWVEAVASSGAPGQEVAAVTTAAAPITADSWAVDTTAGP 280 Query: 401 ADVTAAKSLEEKLKASGVAHEVHIYPGCSHAFMNASPEALE 279 A A + E + + A ++ A + EALE Sbjct: 281 AASVPAPASIENIDITNAAQAANL-----DALIRGVDEALE 316
>TCBE_PSESQ (P27100) Carboxymethylenebutenolidase (EC 3.1.1.45) (Dienelactone| hydrolase) (DLH) Length = 238 Score = 33.1 bits (74), Expect = 0.75 Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 4/100 (4%) Frame = -2 Query: 581 VGVTGYCMGGALA---IASGVLVPEVDAVVAFYGTPSSELADTSK-AQAPIQAHFGELDS 414 V V GYC+GGALA A G V +YG + + ++ + P H G D Sbjct: 117 VAVIGYCLGGALAYEVAAEGF----AQCCVGYYGVGFEKRLERARLVKTPSMFHMGTNDH 172 Query: 413 FVGFADVTAAKSLEEKLKASGVAHEVHIYPGCSHAFMNAS 294 FV A+ L + A +H Y H+F AS Sbjct: 173 FV----TAEARQLITNAFEANPAIALHWY-DAGHSFARAS 207
>SECA_PEA (Q41062) Preprotein translocase secA subunit, chloroplast precursor| Length = 1011 Score = 33.1 bits (74), Expect = 0.75 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = -2 Query: 410 VGFADVTAAKSLEEKLKASGVAHEVHIYPGCSHAFMNASPEALERRKGMGLTDENQGAID 231 VG V + SL ++LK +G+ HEV +NA PE +ER + GA+ Sbjct: 497 VGTTSVEQSDSLSQQLKEAGILHEV----------LNAKPENVEREAEIVAQSGRLGAVT 546 Query: 230 LA 225 +A Sbjct: 547 IA 548
>BRO1_USTMA (Q4PHA8) Vacuolar protein-sorting protein BRO1 (BRO domain-containing| protein 1) Length = 1076 Score = 32.3 bits (72), Expect = 1.3 Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 5/97 (5%) Frame = +2 Query: 215 SGTMPGQWLPD---SHQSNPCPSSSRGPQAMRS*RRGSIQGICGLHVPLQKP*ASPPTTW 385 SG P LP S+Q P P+++ S S L P PPT + Sbjct: 856 SGPPPPPPLPHQQASYQQQPPPAAAAPAHDPYSSMFSSGPFSAALQQPASPQHQRPPTHY 915 Query: 386 PR*HLQIQQNCQAPQNEPGLEPEPWKYQQ--APKMAS 490 Q+ C APQ P L P P ++Q AP +AS Sbjct: 916 GS---QLGYACDAPQRAPALPPPPQQFQPSFAPSVAS 949
>SECA_SPIOL (Q36795) Preprotein translocase secA subunit, chloroplast precursor| Length = 1036 Score = 32.0 bits (71), Expect = 1.7 Identities = 21/70 (30%), Positives = 32/70 (45%) Frame = -2 Query: 434 HFGELDSFVGFADVTAAKSLEEKLKASGVAHEVHIYPGCSHAFMNASPEALERRKGMGLT 255 H L VG V ++SL E+L+ + + HEV +NA PE +ER + Sbjct: 511 HKTGLPVLVGTTSVEQSESLSEQLQQASIPHEV----------LNAKPENVEREAEIVAQ 560 Query: 254 DENQGAIDLA 225 GA+ +A Sbjct: 561 SGRLGAVTIA 570
>EFG_MESFL (Q6F0J4) Elongation factor G (EF-G)| Length = 689 Score = 31.6 bits (70), Expect = 2.2 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = -2 Query: 530 VLVPEVDAVVAFYGTPSSELADTSKAQA-PIQAHFGELDSFVGFADVTAAKSLEEKLKAS 354 V V ++D A + + D A+A PIQ G D+F G D+ K+ E KA Sbjct: 132 VFVNKMDKTGADFIYSVKSIGDRLGAKAAPIQLPIGAEDNFTGIIDLVEMKAYEFDGKAE 191 Query: 353 GVAHEVHI 330 +A E+ I Sbjct: 192 EIAKEIEI 199
>YRD1_CAEEL (Q09571) Hypothetical protein K02A2.1| Length = 158 Score = 31.2 bits (69), Expect = 2.8 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Frame = -2 Query: 584 KVGVTGYCMGGALAI-ASGVLVPEVDAVVAFYGT-------PSSELADTSKAQAPIQAHF 429 K+G G+C+GG ++ + + AV++F+GT P L D S IQ H Sbjct: 30 KLGAFGFCIGGLCSLDCARYRFDGIRAVISFHGTLTPIEGIPLELLDDNS-----IQVHH 84 Query: 428 GELDSFVGFADVTA 387 G+ D V V A Sbjct: 85 GDADKHVSKVTVDA 98
>HXB3_HUMAN (P14651) Homeobox protein Hox-B3 (Hox-2G) (Hox-2.7)| Length = 431 Score = 31.2 bits (69), Expect = 2.8 Identities = 14/46 (30%), Positives = 21/46 (45%) Frame = +3 Query: 141 IHHSENHMDGNCSCRSQETAHPSGEAGPCQVNGSLILISQTHALPP 278 ++H +H GN PS GPC+ + + +S HA PP Sbjct: 373 LNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPP 418
>OL56_STRAT (Q07017) Oleandomycin polyketide synthase, modules 5 and 6| Length = 3519 Score = 30.8 bits (68), Expect = 3.7 Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = +3 Query: 210 GEAGPCQVNG--SLILISQTHALPPLEGLRRCVHEGVGASRVYVDFMCHSRSLELLLQRL 383 G VNG S ++ AL L L C EGV A RV VD+ HS ++ L L Sbjct: 2368 GRVSVAAVNGPSSTVVSGDVQALDEL--LAGCEREGVRARRVPVDYASHSAQMDQLRDEL 2425 Score = 30.4 bits (67), Expect = 4.9 Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = +3 Query: 210 GEAGPCQVNG--SLILISQTHALPPLEGLRRCVHEGVGASRVYVDFMCHSRSLELLLQRL 383 G VNG S ++ AL L L C EGV A RV VD+ HS ++ L L Sbjct: 717 GRLSVAAVNGPSSTVVSGDVQALDEL--LAGCEREGVRARRVPVDYASHSAQMDQLRDEL 774
>GCVK_HCMVT (Q68101) Phosphotransferase UL97 (EC 2.7.1.-) (Ganciclovir kinase)| Length = 707 Score = 30.8 bits (68), Expect = 3.7 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +3 Query: 171 NCSCRSQETAHPSGEAGPCQVNGSLILISQTHALPPLEGLRR-CVHE 308 NCS R +E HP+ P Q +LI HA P+ GLRR C+ E Sbjct: 510 NCSHRLRECYHPAFRPMPLQ----KLLICDPHARFPVAGLRRYCMSE 552
>GCVK_HCMVA (P16788) Phosphotransferase UL97 (EC 2.7.1.-) (Ganciclovir kinase)| (HSRF3 protein) Length = 707 Score = 30.8 bits (68), Expect = 3.7 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +3 Query: 171 NCSCRSQETAHPSGEAGPCQVNGSLILISQTHALPPLEGLRR-CVHE 308 NCS R +E HP+ P Q +LI HA P+ GLRR C+ E Sbjct: 510 NCSHRLRECYHPAFRPMPLQ----KLLICDPHARFPVAGLRRYCMSE 552
>IORA_PYRAB (Q9UZ57) Indolepyruvate oxidoreductase subunit iorA (EC 1.2.7.8)| (IOR) (Indolepyruvate ferredoxin oxidoreductase alpha subunit) Length = 648 Score = 30.8 bits (68), Expect = 3.7 Identities = 16/36 (44%), Positives = 19/36 (52%) Frame = -2 Query: 554 GALAIASGVLVPEVDAVVAFYGTPSSELADTSKAQA 447 G AI G L + A+ GTPSSE+ DT A A Sbjct: 21 GNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVA 56
>ZFP90_RAT (Q4V8A8) Zinc finger protein 90 (Zfp-90)| Length = 633 Score = 30.4 bits (67), Expect = 4.9 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Frame = +3 Query: 96 CTQTF-YSSELTDRHHIHHSENHMDGNCSCRSQETAHPSGEAGPCQVNG 239 C + F + ++ T+ IH EN D + R Q +HP + C V G Sbjct: 452 CGKDFSHITDFTEHQRIHAGENSYDSEQALRQQSLSHPREKPYQCNVCG 500
>C3G_DROME (O77086) Guanine nucleotide-releasing factor 2 (CRK SH3-binding| GNRP) Length = 1571 Score = 30.4 bits (67), Expect = 4.9 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = +3 Query: 483 WRPIESNNSINLRDQNSTCNCQSTSHAITSNTN 581 W P ++NN+ +L N CN +T ++I++ N Sbjct: 79 WSPRDTNNNHSLTSNNCNCNSSNTCNSISATGN 111
>HSBH1_SOYBN (P46608) Homeobox protein SBH1| Length = 379 Score = 30.0 bits (66), Expect = 6.3 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 6/71 (8%) Frame = +3 Query: 12 NHNTTQNHDELA*Y**HNHTSLGWILTYCTQTFYSSELTDRHHIHHSENHMDGNCSCRSQ 191 NHN + D+ +N+T LG +Y E +D HH HH N+ +G+ S S Sbjct: 76 NHNNNKTDDDDN----NNNTGLG---------YYFME-SDHHHHHHGNNNNNGSSSSSSS 121 Query: 192 ET------AHP 206 AHP Sbjct: 122 SAVKAKIMAHP 132
>APEH_AERPE (Q9YBQ2) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)| (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase) Length = 582 Score = 30.0 bits (66), Expect = 6.3 Identities = 11/42 (26%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Frame = -2 Query: 641 GAIKDIQASVKWLKENG-SPKVGVTGYCMGGALAIASGVLVP 519 G ++D+ A+ +W +E+G + ++ + GY GG + + + + P Sbjct: 418 GELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKP 459
>SECA_ARATH (Q9SYI0) Preprotein translocase secA subunit, chloroplast precursor| Length = 1021 Score = 29.6 bits (65), Expect = 8.3 Identities = 18/62 (29%), Positives = 28/62 (45%) Frame = -2 Query: 410 VGFADVTAAKSLEEKLKASGVAHEVHIYPGCSHAFMNASPEALERRKGMGLTDENQGAID 231 VG V + L + L+ +G+ HEV +NA PE +ER + GA+ Sbjct: 510 VGTTSVEQSDELSQLLREAGITHEV----------LNAKPENVEREAEIVAQSGRLGAVT 559 Query: 230 LA 225 +A Sbjct: 560 IA 561
>Y1571_AERPE (Q9YBM7) Hypothetical protein APE1571| Length = 469 Score = 29.6 bits (65), Expect = 8.3 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Frame = +1 Query: 139 IYIIQRTIWMVIAHADPRKRPIQVEKRDHARSMAP*FSSVKPMPFLLSRASGDAFMK-AW 315 ++ + + IW V +H DP +R + V H + P P P S+ DA K Sbjct: 384 VHDVNQVIWAVSSHVDP-QRDVLVVPHSHTDELDP----ATPTPMYGSKLGIDATRKLPE 438 Query: 316 EHPGYMWTSCATPE 357 E+ G W P+ Sbjct: 439 EYGGKQWPEEVAPD 452 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 103,946,521 Number of Sequences: 219361 Number of extensions: 2403397 Number of successful extensions: 7365 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 6990 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7345 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6257125380 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
