| Clone Name | rbags4j14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK106208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-G04, full insert sequence Length = 1086 Score = 539 bits (272), Expect = e-150 Identities = 427/479 (89%) Strand = Plus / Minus Query: 175 gctcatgcagatcccaggaaacggcccatccaagtggagaagcgggaccatgccaggtca 234 ||||| || ||||| |||||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 891 gctcacgccgatccaaggaaacgacccatccaagtcgagaagcgagaccaggccaggtca 832 Query: 235 atggctccctgattctcatcagtcaaacccatgcccttcctcctctcgagggcctcaggc 294 || ||| |||| ||||||||||||| |||||| |||||||||||| || ||||||||| Sbjct: 831 attgctgcctggttctcatcagtcagacccatctccttcctcctcttgacggcctcaggt 772 Query: 295 gatgcgttcatgaaggcgtgggagcatccagggtatatgtggacttcatgtgccactcca 354 |||| |||||| || || || ||||| |||||||| |||||||||||||||| ||| ||| Sbjct: 771 gatgtgttcataaaagcatgcgagcagccagggtagatgtggacttcatgtggcacgcca 712 Query: 355 gaagccttgagcttctcctccaacgacttggccgcggtaacatctgcaaatccaacaaaa 414 || | ||||||||||||||||| ||||||||| || || ||||||||||||||||||||| Sbjct: 711 gatgacttgagcttctcctccagcgacttggctgccgtgacatctgcaaatccaacaaaa 652 Query: 415 ctgtcaagctccccaaaatgagcctggattggagcctgagccttggaagtatcagcaagc 474 ||||||||||||||||||||||||||||| |||||||| |||||||||| ||| |||||| Sbjct: 651 ctgtcaagctccccaaaatgagcctggatgggagcctgggccttggaagcatcggcaagc 592 Query: 475 tccgaagatggcgtcccatagaaagcaacaacagcatcaacctccgggaccaaaactcca 534 || |||| ||| |||||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 591 tcagaaggtggtgtcccatagaaagccacaacagcatcaacctctgggactgaaactcca 532 Query: 535 cttgcaattgccaaagcacctcccatgcaataaccagtaacaccaaccttgggtgatcca 594 |||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 531 cttgcaattgacaaagcgcctcccatgcaatatccagtaacaccaaccttgggtgatcca 472 Query: 595 ttttccttcagccacttaactgangcctgaatatccttgattgcacctggccagtctag 653 ||| |||| ||||| |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 471 tttgccttgagccatttaactgaagcctgaatatccttgaccgcacccggccagtctag 413
>dbj|AK104379.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G12, full insert sequence Length = 1010 Score = 539 bits (272), Expect = e-150 Identities = 427/479 (89%) Strand = Plus / Minus Query: 175 gctcatgcagatcccaggaaacggcccatccaagtggagaagcgggaccatgccaggtca 234 ||||| || ||||| |||||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 835 gctcacgccgatccaaggaaacgacccatccaagtcgagaagcgagaccaggccaggtca 776 Query: 235 atggctccctgattctcatcagtcaaacccatgcccttcctcctctcgagggcctcaggc 294 || ||| |||| ||||||||||||| |||||| |||||||||||| || ||||||||| Sbjct: 775 attgctgcctggttctcatcagtcagacccatctccttcctcctcttgacggcctcaggt 716 Query: 295 gatgcgttcatgaaggcgtgggagcatccagggtatatgtggacttcatgtgccactcca 354 |||| |||||| || || || ||||| |||||||| |||||||||||||||| ||| ||| Sbjct: 715 gatgtgttcataaaagcatgcgagcagccagggtagatgtggacttcatgtggcacgcca 656 Query: 355 gaagccttgagcttctcctccaacgacttggccgcggtaacatctgcaaatccaacaaaa 414 || | ||||||||||||||||| ||||||||| || || ||||||||||||||||||||| Sbjct: 655 gatgacttgagcttctcctccagcgacttggctgccgtgacatctgcaaatccaacaaaa 596 Query: 415 ctgtcaagctccccaaaatgagcctggattggagcctgagccttggaagtatcagcaagc 474 ||||||||||||||||||||||||||||| |||||||| |||||||||| ||| |||||| Sbjct: 595 ctgtcaagctccccaaaatgagcctggatgggagcctgggccttggaagcatcggcaagc 536 Query: 475 tccgaagatggcgtcccatagaaagcaacaacagcatcaacctccgggaccaaaactcca 534 || |||| ||| |||||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 535 tcagaaggtggtgtcccatagaaagccacaacagcatcaacctctgggactgaaactcca 476 Query: 535 cttgcaattgccaaagcacctcccatgcaataaccagtaacaccaaccttgggtgatcca 594 |||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 475 cttgcaattgacaaagcgcctcccatgcaatatccagtaacaccaaccttgggtgatcca 416 Query: 595 ttttccttcagccacttaactgangcctgaatatccttgattgcacctggccagtctag 653 ||| |||| ||||| |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 415 tttgccttgagccatttaactgaagcctgaatatccttgaccgcacccggccagtctag 357
>dbj|AK059992.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C04, full insert sequence Length = 1014 Score = 539 bits (272), Expect = e-150 Identities = 427/479 (89%) Strand = Plus / Minus Query: 175 gctcatgcagatcccaggaaacggcccatccaagtggagaagcgggaccatgccaggtca 234 ||||| || ||||| |||||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 837 gctcacgccgatccaaggaaacgacccatccaagtcgagaagcgagaccaggccaggtca 778 Query: 235 atggctccctgattctcatcagtcaaacccatgcccttcctcctctcgagggcctcaggc 294 || ||| |||| ||||||||||||| |||||| |||||||||||| || ||||||||| Sbjct: 777 attgctgcctggttctcatcagtcagacccatctccttcctcctcttgacggcctcaggt 718 Query: 295 gatgcgttcatgaaggcgtgggagcatccagggtatatgtggacttcatgtgccactcca 354 |||| |||||| || || || ||||| |||||||| |||||||||||||||| ||| ||| Sbjct: 717 gatgtgttcataaaagcatgcgagcagccagggtagatgtggacttcatgtggcacgcca 658 Query: 355 gaagccttgagcttctcctccaacgacttggccgcggtaacatctgcaaatccaacaaaa 414 || | ||||||||||||||||| ||||||||| || || ||||||||||||||||||||| Sbjct: 657 gatgacttgagcttctcctccagcgacttggctgccgtgacatctgcaaatccaacaaaa 598 Query: 415 ctgtcaagctccccaaaatgagcctggattggagcctgagccttggaagtatcagcaagc 474 ||||||||||||||||||||||||||||| |||||||| |||||||||| ||| |||||| Sbjct: 597 ctgtcaagctccccaaaatgagcctggatgggagcctgggccttggaagcatcggcaagc 538 Query: 475 tccgaagatggcgtcccatagaaagcaacaacagcatcaacctccgggaccaaaactcca 534 || |||| ||| |||||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 537 tcagaaggtggtgtcccatagaaagccacaacagcatcaacctctgggactgaaactcca 478 Query: 535 cttgcaattgccaaagcacctcccatgcaataaccagtaacaccaaccttgggtgatcca 594 |||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 477 cttgcaattgacaaagcgcctcccatgcaatatccagtaacaccaaccttgggtgatcca 418 Query: 595 ttttccttcagccacttaactgangcctgaatatccttgattgcacctggccagtctag 653 ||| |||| ||||| |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 417 tttgccttgagccatttaactgaagcctgaatatccttgaccgcacccggccagtctag 359
>ref|NM_193188.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 846 Score = 537 bits (271), Expect = e-149 Identities = 420/470 (89%) Strand = Plus / Minus Query: 184 gatcccaggaaacggcccatccaagtggagaagcgggaccatgccaggtcaatggctccc 243 ||||| |||||||| ||||||||||| |||||||| ||||| ||||||||||| ||| || Sbjct: 839 gatccaaggaaacgacccatccaagtcgagaagcgagaccaggccaggtcaattgctgcc 780 Query: 244 tgattctcatcagtcaaacccatgcccttcctcctctcgagggcctcaggcgatgcgttc 303 || ||||||||||||| |||||| |||||||||||| || ||||||||| |||| |||| Sbjct: 779 tggttctcatcagtcagacccatctccttcctcctcttgacggcctcaggtgatgtgttc 720 Query: 304 atgaaggcgtgggagcatccagggtatatgtggacttcatgtgccactccagaagccttg 363 || || || || ||||| |||||||| |||||||||||||||| ||| ||||| | |||| Sbjct: 719 ataaaagcatgcgagcagccagggtagatgtggacttcatgtggcacgccagatgacttg 660 Query: 364 agcttctcctccaacgacttggccgcggtaacatctgcaaatccaacaaaactgtcaagc 423 ||||||||||||| ||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 659 agcttctcctccagcgacttggctgccgtgacatctgcaaatccaacaaaactgtcaagc 600 Query: 424 tccccaaaatgagcctggattggagcctgagccttggaagtatcagcaagctccgaagat 483 |||||||||||||||||||| |||||||| |||||||||| ||| |||||||| |||| | Sbjct: 599 tccccaaaatgagcctggatgggagcctgggccttggaagcatcggcaagctcagaaggt 540 Query: 484 ggcgtcccatagaaagcaacaacagcatcaacctccgggaccaaaactccacttgcaatt 543 || |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 539 ggtgtcccatagaaagccacaacagcatcaacctctgggactgaaactccacttgcaatt 480 Query: 544 gccaaagcacctcccatgcaataaccagtaacaccaaccttgggtgatccattttccttc 603 | |||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 479 gacaaagcgcctcccatgcaatatccagtaacaccaaccttgggtgatccatttgccttg 420 Query: 604 agccacttaactgangcctgaatatccttgattgcacctggccagtctag 653 ||||| |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 419 agccatttaactgaagcctgaatatccttgaccgcacccggccagtctag 370
>gb|BT016534.1| Zea mays clone Contig367 mRNA sequence Length = 1037 Score = 474 bits (239), Expect = e-130 Identities = 412/470 (87%) Strand = Plus / Minus Query: 181 gcagatcccaggaaacggcccatccaagtggagaagcgggaccatgccaggtcaatggct 240 |||||||| ||||| ||||||||||||| |||||||| ||||| |||||||| | |||| Sbjct: 867 gcagatccgaggaaccggcccatccaagaagagaagcgagaccaggccaggtcgacggct 808 Query: 241 ccctgattctcatcagtcaaacccatgcccttcctcctctcgagggcctcaggcgatgcg 300 |||| ||||||||||||| |||||| |||||| |||||| ||| ||||||||||| | | Sbjct: 807 tcctggttctcatcagtcagacccatccccttcttcctcttgagtgcctcaggcgaagtg 748 Query: 301 ttcatgaaggcgtgggagcatccagggtatatgtggacttcatgtgccactccagaagcc 360 ||||||||||| || || ||||||||||||||||| ||||||| || | || |||| Sbjct: 747 ttcatgaaggcatgcgaacatccagggtatatgtgaacttcatatggtatcccggaagat 688 Query: 361 ttgagcttctcctccaacgacttggccgcggtaacatctgcaaatccaacaaaactgtca 420 |||||||||||||||| |||||||| || || ||||||| ||| ||||||||||||||| Sbjct: 687 ttgagcttctcctccagggacttggctgcagtgacatctgaaaaaccaacaaaactgtca 628 Query: 421 agctccccaaaatgagcctggattggagcctgagccttggaagtatcagcaagctccgaa 480 ||||||| ||||||||||| || ||||||| |||||| |||| |||||||||||| ||| Sbjct: 627 tgctccccgaaatgagcctgtataggagccttagccttagaaggatcagcaagctcagaa 568 Query: 481 gatggcgtcccatagaaagcaacaacagcatcaacctccgggaccaaaactccacttgca 540 ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 567 gatggtgtcccatagaaagcaacaacagcatcaacctctgggactaaaactccacttgca 508 Query: 541 attgccaaagcacctcccatgcaataaccagtaacaccaaccttgggtgatccattttcc 600 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct: 507 attgataaagcacctcccatgcaatagccagtaacaccaaccttgggtgatccatttgac 448 Query: 601 ttcagccacttaactgangcctgaatatccttgattgcacctggccagtc 650 |||||||| |||||||| ||||| |||||||||| |||||| ||||||| Sbjct: 447 ttcagccatttaactgaagcctggatatccttgactgcaccctgccagtc 398
>gb|AY104907.1| Zea mays PCO117250 mRNA sequence Length = 1130 Score = 474 bits (239), Expect = e-130 Identities = 412/470 (87%) Strand = Plus / Minus Query: 181 gcagatcccaggaaacggcccatccaagtggagaagcgggaccatgccaggtcaatggct 240 |||||||| ||||| ||||||||||||| |||||||| ||||| |||||||| | |||| Sbjct: 880 gcagatccgaggaaccggcccatccaagaagagaagcgagaccaggccaggtcgacggct 821 Query: 241 ccctgattctcatcagtcaaacccatgcccttcctcctctcgagggcctcaggcgatgcg 300 |||| ||||||||||||| |||||| |||||| |||||| ||| ||||||||||| | | Sbjct: 820 tcctggttctcatcagtcagacccatccccttcttcctcttgagtgcctcaggcgaagtg 761 Query: 301 ttcatgaaggcgtgggagcatccagggtatatgtggacttcatgtgccactccagaagcc 360 ||||||||||| || || ||||||||||||||||| ||||||| || | || |||| Sbjct: 760 ttcatgaaggcatgcgaacatccagggtatatgtgaacttcatatggtatcccggaagat 701 Query: 361 ttgagcttctcctccaacgacttggccgcggtaacatctgcaaatccaacaaaactgtca 420 |||||||||||||||| |||||||| || || ||||||| ||| ||||||||||||||| Sbjct: 700 ttgagcttctcctccagggacttggctgcagtgacatctgaaaaaccaacaaaactgtca 641 Query: 421 agctccccaaaatgagcctggattggagcctgagccttggaagtatcagcaagctccgaa 480 ||||||| ||||||||||| || ||||||| |||||| |||| |||||||||||| ||| Sbjct: 640 tgctccccgaaatgagcctgtataggagccttagccttagaaggatcagcaagctcagaa 581 Query: 481 gatggcgtcccatagaaagcaacaacagcatcaacctccgggaccaaaactccacttgca 540 ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 580 gatggtgtcccatagaaagcaacaacagcatcaacctctgggactaaaactccacttgca 521 Query: 541 attgccaaagcacctcccatgcaataaccagtaacaccaaccttgggtgatccattttcc 600 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct: 520 attgataaagcacctcccatgcaatagccagtaacaccaaccttgggtgatccatttgac 461 Query: 601 ttcagccacttaactgangcctgaatatccttgattgcacctggccagtc 650 |||||||| |||||||| ||||| |||||||||| |||||| ||||||| Sbjct: 460 ttcagccatttaactgaagcctggatatccttgactgcaccctgccagtc 411
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 266 bits (134), Expect = 8e-68 Identities = 176/190 (92%) Strand = Plus / Minus Query: 394 acatctgcaaatccaacaaaactgtcaagctccccaaaatgagcctggattggagcctga 453 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19135310 acatctgcaaatccaacaaaactgtcaagctccccaaaatgagcctggatgggagcctgg 19135251 Query: 454 gccttggaagtatcagcaagctccgaagatggcgtcccatagaaagcaacaacagcatca 513 |||||||||| ||| |||||||| |||| ||| |||||||||||||| |||||||||||| Sbjct: 19135250 gccttggaagcatcggcaagctcagaaggtggtgtcccatagaaagccacaacagcatca 19135191 Query: 514 acctccgggaccaaaactccacttgcaattgccaaagcacctcccatgcaataaccagta 573 ||||| ||||| |||||||||||||||||| |||||| |||||||||||||| |||||| Sbjct: 19135190 acctctgggactgaaactccacttgcaattgacaaagcgcctcccatgcaatatccagta 19135131 Query: 574 acaccaacct 583 |||||||||| Sbjct: 19135130 acaccaacct 19135121 Score = 198 bits (100), Expect = 2e-47 Identities = 184/212 (86%) Strand = Plus / Minus Query: 175 gctcatgcagatcccaggaaacggcccatccaagtggagaagcgggaccatgccaggtca 234 ||||| || ||||| |||||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 19135808 gctcacgccgatccaaggaaacgacccatccaagtcgagaagcgagaccaggccaggtca 19135749 Query: 235 atggctccctgattctcatcagtcaaacccatgcccttcctcctctcgagggcctcaggc 294 || ||| |||| ||||||||||||| |||||| |||||||||||| || ||||||||| Sbjct: 19135748 attgctgcctggttctcatcagtcagacccatctccttcctcctcttgacggcctcaggt 19135689 Query: 295 gatgcgttcatgaaggcgtgggagcatccagggtatatgtggacttcatgtgccactcca 354 |||| |||||| || || || ||||| |||||||| |||||||||||||||| ||| ||| Sbjct: 19135688 gatgtgttcataaaagcatgcgagcagccagggtagatgtggacttcatgtggcacgcca 19135629 Query: 355 gaagccttgagcttctcctccaacgacttggc 386 || | ||||||||||||||||| ||||||||| Sbjct: 19135628 gatgacttgagcttctcctccagcgacttggc 19135597 Score = 93.7 bits (47), Expect = 7e-16 Identities = 67/74 (90%) Strand = Plus / Minus Query: 580 accttgggtgatccattttccttcagccacttaactgangcctgaatatccttgattgca 639 |||||||||||||||||| |||| ||||| |||||||| |||||||||||||||| ||| Sbjct: 19134387 accttgggtgatccatttgccttgagccatttaactgaagcctgaatatccttgaccgca 19134328 Query: 640 cctggccagtctag 653 || ||||||||||| Sbjct: 19134327 cccggccagtctag 19134314 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 attcagagaaccatatggatg 168 ||||||||||||||||||||| Sbjct: 9273040 attcagagaaccatatggatg 9273060
>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702H08 Length = 166899 Score = 266 bits (134), Expect = 8e-68 Identities = 176/190 (92%) Strand = Plus / Minus Query: 394 acatctgcaaatccaacaaaactgtcaagctccccaaaatgagcctggattggagcctga 453 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 100727 acatctgcaaatccaacaaaactgtcaagctccccaaaatgagcctggatgggagcctgg 100668 Query: 454 gccttggaagtatcagcaagctccgaagatggcgtcccatagaaagcaacaacagcatca 513 |||||||||| ||| |||||||| |||| ||| |||||||||||||| |||||||||||| Sbjct: 100667 gccttggaagcatcggcaagctcagaaggtggtgtcccatagaaagccacaacagcatca 100608 Query: 514 acctccgggaccaaaactccacttgcaattgccaaagcacctcccatgcaataaccagta 573 ||||| ||||| |||||||||||||||||| |||||| |||||||||||||| |||||| Sbjct: 100607 acctctgggactgaaactccacttgcaattgacaaagcgcctcccatgcaatatccagta 100548 Query: 574 acaccaacct 583 |||||||||| Sbjct: 100547 acaccaacct 100538 Score = 198 bits (100), Expect = 2e-47 Identities = 184/212 (86%) Strand = Plus / Minus Query: 175 gctcatgcagatcccaggaaacggcccatccaagtggagaagcgggaccatgccaggtca 234 ||||| || ||||| |||||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 101225 gctcacgccgatccaaggaaacgacccatccaagtcgagaagcgagaccaggccaggtca 101166 Query: 235 atggctccctgattctcatcagtcaaacccatgcccttcctcctctcgagggcctcaggc 294 || ||| |||| ||||||||||||| |||||| |||||||||||| || ||||||||| Sbjct: 101165 attgctgcctggttctcatcagtcagacccatctccttcctcctcttgacggcctcaggt 101106 Query: 295 gatgcgttcatgaaggcgtgggagcatccagggtatatgtggacttcatgtgccactcca 354 |||| |||||| || || || ||||| |||||||| |||||||||||||||| ||| ||| Sbjct: 101105 gatgtgttcataaaagcatgcgagcagccagggtagatgtggacttcatgtggcacgcca 101046 Query: 355 gaagccttgagcttctcctccaacgacttggc 386 || | ||||||||||||||||| ||||||||| Sbjct: 101045 gatgacttgagcttctcctccagcgacttggc 101014 Score = 93.7 bits (47), Expect = 7e-16 Identities = 67/74 (90%) Strand = Plus / Minus Query: 580 accttgggtgatccattttccttcagccacttaactgangcctgaatatccttgattgca 639 |||||||||||||||||| |||| ||||| |||||||| |||||||||||||||| ||| Sbjct: 99804 accttgggtgatccatttgccttgagccatttaactgaagcctgaatatccttgaccgca 99745 Query: 640 cctggccagtctag 653 || ||||||||||| Sbjct: 99744 cccggccagtctag 99731
>gb|BT014493.1| Lycopersicon esculentum clone 133862R, mRNA sequence Length = 1164 Score = 79.8 bits (40), Expect = 1e-11 Identities = 105/127 (82%) Strand = Plus / Minus Query: 508 gcatcaacctccgggaccaaaactccacttgcaattgccaaagcacctcccatgcaataa 567 |||| |||||| ||||||||||| ||||||||| || | |||||| |||||||| || Sbjct: 525 gcattaacctctgggaccaaaacagaacttgcaatcgcaagagcaccacccatgcagtat 466 Query: 568 ccagtaacaccaaccttgggtgatccattttccttcagccacttaactgangcctgaata 627 |||||||| |||||||| ||||||||| ||| ||||| |||||||| ||||||||| Sbjct: 465 ccagtaactccaacctttttggatccatttgactttagccaattaactgaagcctgaata 406 Query: 628 tccttga 634 || |||| Sbjct: 405 tctttga 399
>gb|AY086081.1| Arabidopsis thaliana clone 2114 mRNA, complete sequence Length = 931 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 331 atgtggacttcatgtgccactccagaagccttgagcttctcctccaacgacttggccgcg 390 ||||| ||||||||||| |||||||| || || |||||||| || | ||| || || Sbjct: 614 atgtgaacttcatgtgctactccagacgctttcagcttctcttcgagattctttgctgcc 555 Query: 391 gtaacatctgcaaatccaacaaaactgtcaagctccccaaaatgagcctg 440 || ||||| | ||| ||||||||| |||| ||||| |||||||||||||| Sbjct: 554 gtgacatcagaaaaaccaacaaaattgtcgagctctccaaaatgagcctg 505
>gb|AC161285.2| Pan troglodytes BAC clone CH251-310B11 from chromosome 7, complete sequence Length = 171038 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 492 atagaaagcaacaacagcatcaac 515 |||||||||||||||||||||||| Sbjct: 96471 atagaaagcaacaacagcatcaac 96448
>gb|AC002458.1| Homo sapiens BAC clone CTB-98M4 from 7, complete sequence Length = 82032 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 492 atagaaagcaacaacagcatcaac 515 |||||||||||||||||||||||| Sbjct: 44916 atagaaagcaacaacagcatcaac 44939
>gb|AC142302.1| Pan troglodytes BAC clone RP43-128I16 from 7, complete sequence Length = 161986 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 492 atagaaagcaacaacagcatcaac 515 |||||||||||||||||||||||| Sbjct: 52049 atagaaagcaacaacagcatcaac 52072
>emb|AL590290.5| Human DNA sequence from clone RP11-228O6 on chromosome 6, complete sequence Length = 114653 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatcaacc 516 ||||||||||||||||||||||| Sbjct: 33126 agaaagcaacaacagcatcaacc 33148
>ref|NM_128811.2| Arabidopsis thaliana hydrolase AT2G32520 mRNA, complete cds Length = 1118 Score = 44.1 bits (22), Expect = 0.57 Identities = 88/110 (80%) Strand = Plus / Minus Query: 331 atgtggacttcatgtgccactccagaagccttgagcttctcctccaacgacttggccgcg 390 ||||| ||||||||||| |||||||| || || |||||||| || | ||| || || Sbjct: 666 atgtgaacttcatgtgctactccagacgctttcagcttctcttcgagattctttgctgcc 607 Query: 391 gtaacatctgcaaatccaacaaaactgtcaagctccccaaaatgagcctg 440 || ||||| | ||| || |||||| |||| ||||| |||||||||||||| Sbjct: 606 gtgacatcagaaaaaccgacaaaattgtcgagctctccaaaatgagcctg 557
>emb|BX546469.1| Human DNA sequence from clone RP5-1111N9 on chromosome Xq21.1-21.3, complete sequence Length = 58857 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 14366 agaaagcaacaacagcatcaac 14387
>emb|AL583825.8| Human DNA sequence from clone RP11-362H12 on chromosome 1 Contains a mitochondrial intermediate peptidase (MIPEP) pseudogene and a CpG island, complete sequence Length = 198794 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 173719 agaaagcaacaacagcatcaac 173698
>emb|AL356956.11| Human DNA sequence from clone RP11-538A16 on chromosome 6 Contains an activating transcription factor 1 (ATF1) pseudogene, complete sequence Length = 194264 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 18045 agaaagcaacaacagcatcaac 18066
>emb|AL354814.19| Human DNA sequence from clone RP11-94N9 on chromosome 13q13.3-14.3 Contains a guanine nucleotide binding protein (G protein), gamma 5 (GNG5) pseudogene, complete sequence Length = 70126 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 173 ttgctcatgcagatcccaggaaacggccca 202 |||||| ||||||||||||||||| ||||| Sbjct: 64827 ttgctcctgcagatcccaggaaacagccca 64856
>emb|AL139399.10| Human DNA sequence from clone RP11-574A21 on chromosome Xq21.33-22.3, complete sequence Length = 71169 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 56924 agaaagcaacaacagcatcaac 56945
>emb|AL157778.9| Human DNA sequence from clone RP11-485F13 on chromosome Xq21.2-22.2, complete sequence Length = 140757 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 133797 agaaagcaacaacagcatcaac 133818
>emb|AL121592.14|HSJ765D23 Human DNA sequence from clone RP4-765D23 on chromosome 20 Contains STSs and GSSs, complete sequence Length = 30996 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 26353 agaaagcaacaacagcatcaac 26374
>gb|AC104952.8| Homo sapiens chromosome 8, clone RP11-141J23, complete sequence Length = 190902 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 62173 agaaagcaacaacagcatcaac 62152
>gb|AC123901.2| Homo sapiens chromosome 3 clone RP11-952G4, complete sequence Length = 217409 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 27164 agaaagcaacaacagcatcaac 27185
>gb|AC116362.3| Homo sapiens chromosome 5 clone RP11-756H20, complete sequence Length = 178530 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 160644 agaaagcaacaacagcatcaac 160665
>gb|AC094102.3| Homo sapiens chromosome 5 clone RP11-409A17, complete sequence Length = 118985 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 35278 agaaagcaacaacagcatcaac 35257
>gb|AC090377.15| Homo sapiens chromosome 18, clone RP11-866E20, complete sequence Length = 192704 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 62598 agaaagcaacaacagcatcaac 62619
>gb|AC099051.2| Homo sapiens chromosome 3 clone RP11-416A9, complete sequence Length = 174372 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 142856 agaaagcaacaacagcatcaac 142877
>gb|AC015724.9| Homo sapiens chromosome 17, clone RP11-45J24, complete sequence Length = 189055 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 142 tacatcattcagagaaccatat 163 |||||||||||||||||||||| Sbjct: 106483 tacatcattcagagaaccatat 106504
>gb|AC079349.6| Homo sapiens BAC clone RP11-436A7 from 4, complete sequence Length = 193632 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 21683 agaaagcaacaacagcatcaac 21662
>gb|BT006416.1| Arabidopsis thaliana At2g32520 gene, complete cds Length = 720 Score = 44.1 bits (22), Expect = 0.57 Identities = 88/110 (80%) Strand = Plus / Minus Query: 331 atgtggacttcatgtgccactccagaagccttgagcttctcctccaacgacttggccgcg 390 ||||| ||||||||||| |||||||| || || |||||||| || | ||| || || Sbjct: 572 atgtgaacttcatgtgctactccagacgctttcagcttctcttcgagattctttgctgcc 513 Query: 391 gtaacatctgcaaatccaacaaaactgtcaagctccccaaaatgagcctg 440 || ||||| | ||| || |||||| |||| ||||| |||||||||||||| Sbjct: 512 gtgacatcagaaaaaccgacaaaattgtcgagctctccaaaatgagcctg 463
>gb|AC025972.6|AC025972 Homo sapiens chromosome 11, clone RP11-6K5, complete sequence Length = 165962 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 115161 agaaagcaacaacagcatcaac 115182
>gb|AC021878.4| Homo sapiens BAC clone RP11-18N21 from 4, complete sequence Length = 161391 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 37709 agaaagcaacaacagcatcaac 37688
>gb|AC097710.2| Homo sapiens BAC clone RP11-44H17 from 4, complete sequence Length = 156848 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 147562 agaaagcaacaacagcatcaac 147541
>gb|AC107078.4| Homo sapiens BAC clone RP11-582N16 from 2, complete sequence Length = 31946 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 17547 agaaagcaacaacagcatcaac 17568
>gb|AC007785.1|AC007785 Homo sapiens chromosome 19, BAC 282485 (CIT-B-344H19), complete sequence Length = 166500 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 98673 agaaagcaacaacagcatcaac 98652
>emb|AL022574.7|HS1111N9 Human DNA sequence from clone RP5-1111N9 on chromosome Xq21.1-21.3, complete sequence Length = 148521 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatcaac 515 |||||||||||||||||||||| Sbjct: 104030 agaaagcaacaacagcatcaac 104051
>dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT18I21, TM1144, complete sequence Length = 135217 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 490 ccatagaaagcaacaacagcatcaac 515 ||||||||||| |||||||||||||| Sbjct: 11369 ccatagaaagctacaacagcatcaac 11344
>dbj|AP006081.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT32P24, TM0120, complete sequence Length = 137804 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 490 ccatagaaagcaacaacagcatcaac 515 ||||||||||| |||||||||||||| Sbjct: 3475 ccatagaaagctacaacagcatcaac 3500
>gb|AC137680.10| Mus musculus chromosome 13, clone RP23-454P19, complete sequence Length = 197663 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 aagcaacaacagcatcaacct 517 ||||||||||||||||||||| Sbjct: 43505 aagcaacaacagcatcaacct 43525
>gb|AC115299.4| Mus musculus BAC clone RP23-444O19 from 13, complete sequence Length = 201296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 aagcaacaacagcatcaacct 517 ||||||||||||||||||||| Sbjct: 128785 aagcaacaacagcatcaacct 128805
>emb|AL353664.14| Human DNA sequence from clone RP11-140B17 on chromosome 10, complete sequence Length = 79943 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 496 aaagcaacaacagcatcaacc 516 ||||||||||||||||||||| Sbjct: 31258 aaagcaacaacagcatcaacc 31238
>emb|AL137787.11| Human DNA sequence from clone RP5-1070B1 on chromosome Xq22.1-23 Contains the 3' end of a novel gene, a novel gene (KIAA1817) and the 5' end of the PRPS1 for phosphoribosyl pyrophosphate synthetase 1 (PRSI) gene, complete sequence Length = 89446 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 494 agaaagcaacaacagcatcaa 514 ||||||||||||||||||||| Sbjct: 38949 agaaagcaacaacagcatcaa 38929
>gb|AC007688.15| Homo sapiens 12 BAC RPCI11-392P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161577 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 403 aatccaacaaaactgtcaagctccc 427 |||||||||||||||| |||||||| Sbjct: 17558 aatccaacaaaactgtgaagctccc 17534
>gb|AC004681.3| Arabidopsis thaliana chromosome 2 clone T26B15 map TEn5, complete sequence Length = 78732 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 331 atgtggacttcatgtgccactccagaagccttgagcttctc 371 ||||| ||||||||||| |||||||| || || |||||||| Sbjct: 26332 atgtgaacttcatgtgctactccagacgctttcagcttctc 26372 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 409 acaaaactgtcaagctccccaaaatgagcctg 440 |||||| |||| ||||| |||||||||||||| Sbjct: 26494 acaaaattgtcgagctctccaaaatgagcctg 26525
>gb|AC091878.2| Homo sapiens chromosome 5 clone CTD-3065A13, complete sequence Length = 132444 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 634 attgcacctggccagtctagt 654 ||||||||||||||||||||| Sbjct: 86019 attgcacctggccagtctagt 85999
>gb|AF212831.2|AF212831 Homo sapiens chromosome 21 clone BAC R-45M19 map 21q21, complete sequence Length = 159255 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatcaa 514 ||||||||||||||||||||| Sbjct: 26813 agaaagcaacaacagcatcaa 26833
>gb|AF130359.3|AF130359 Homo sapiens chromosome 21 clone PAC K15697 map 21q21, complete sequence Length = 146412 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatcaa 514 ||||||||||||||||||||| Sbjct: 118599 agaaagcaacaacagcatcaa 118619
>gb|AC121761.4| Homo sapiens 12 BAC RP11-585P4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170917 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatcaa 514 ||||||||||||||||||||| Sbjct: 20791 agaaagcaacaacagcatcaa 20811
>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0667A10 Length = 152237 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 attcagagaaccatatggatg 168 ||||||||||||||||||||| Sbjct: 49634 attcagagaaccatatggatg 49654
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 tgccactccagaagccttgag 365 ||||||||||||||||||||| Sbjct: 2567360 tgccactccagaagccttgag 2567340
>dbj|BS000031.1| Pan troglodytes chromosome 22 clone:PTB-082B23, map 22, complete sequences Length = 218696 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatcaa 514 ||||||||||||||||||||| Sbjct: 28439 agaaagcaacaacagcatcaa 28459
>emb|AL163213.2|HS21C013 Homo sapiens chromosome 21 segment HS21C013 Length = 340000 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatcaa 514 ||||||||||||||||||||| Sbjct: 187476 agaaagcaacaacagcatcaa 187496
>dbj|AK067610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112F12, full insert sequence Length = 2264 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 attcagagaaccatatggatg 168 ||||||||||||||||||||| Sbjct: 2100 attcagagaaccatatggatg 2080
>gb|AC006449.19|AC006449 Homo sapiens chromosome 17, clone hCIT.58_E_17, complete sequence Length = 286758 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 acccatgcccttcctcctctc 281 ||||||||||||||||||||| Sbjct: 155183 acccatgcccttcctcctctc 155163
>gb|AC153640.6| Mus musculus 6 BAC RP23-230A2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208897 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 acccatgcccttcctcctctc 281 ||||||||||||||||||||| Sbjct: 44461 acccatgcccttcctcctctc 44481
>ref|XM_630296.1| Dictyostelium discoideum hypothetical protein (DDB0219642), partial mRNA Length = 1350 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 aaagcaacaacagcatcaac 515 |||||||||||||||||||| Sbjct: 1203 aaagcaacaacagcatcaac 1222
>gb|AC163722.6| Mus musculus BAC clone RP23-447O11 from chromosome 19, complete sequence Length = 178562 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 cccatgcccttcctcctctc 281 |||||||||||||||||||| Sbjct: 80775 cccatgcccttcctcctctc 80794
>gb|AC161129.3| Pan troglodytes BAC clone CH251-332I16 from chromosome 7, complete sequence Length = 172413 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 aaagcaacaacagcatcaac 515 |||||||||||||||||||| Sbjct: 63768 aaagcaacaacagcatcaac 63787
>gb|AC161284.2| Pan troglodytes BAC clone CH251-341A21 from chromosome 7, complete sequence Length = 153042 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 aaagcaacaacagcatcaac 515 |||||||||||||||||||| Sbjct: 150795 aaagcaacaacagcatcaac 150814
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 tgagctgactgacagacacc 138 |||||||||||||||||||| Sbjct: 7276375 tgagctgactgacagacacc 7276356
>gb|AC131672.3| Mus musculus chromosome UNK clone RP23-314O21, complete sequence Length = 199837 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tctgagctgactgacagaca 136 |||||||||||||||||||| Sbjct: 192476 tctgagctgactgacagaca 192457
>gb|AC006036.3| Homo sapiens BAC clone RP11-215P16 from 7, complete sequence Length = 156840 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 aaagcaacaacagcatcaac 515 |||||||||||||||||||| Sbjct: 31109 aaagcaacaacagcatcaac 31128
>ref|XM_756701.1| Ustilago maydis 521 hypothetical protein (UM05647.1) partial mRNA Length = 2406 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 agcaagctccgaagatggcg 487 |||||||||||||||||||| Sbjct: 219 agcaagctccgaagatggcg 238
>gb|AF036699.2| Caenorhabditis elegans cosmid F58F6, complete sequence Length = 43764 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 cttggaagtatcagcaagct 475 |||||||||||||||||||| Sbjct: 38134 cttggaagtatcagcaagct 38115
>emb|AL163280.2|HS21C080 Homo sapiens chromosome 21 segment HS21C080 Length = 340000 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 agccttggaagtatcagcaa 472 |||||||||||||||||||| Sbjct: 197664 agccttggaagtatcagcaa 197645
>gb|AC138171.17| Medicago truncatula clone mth2-7f10, complete sequence Length = 104336 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 catctgcaaatccaacaaaa 414 |||||||||||||||||||| Sbjct: 28075 catctgcaaatccaacaaaa 28094
>gb|AC139708.15| Medicago truncatula clone mth2-9f16, complete sequence Length = 117358 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 catctgcaaatccaacaaaa 414 |||||||||||||||||||| Sbjct: 94025 catctgcaaatccaacaaaa 94006
>gb|AC152407.19| Medicago truncatula clone mth2-77l23, complete sequence Length = 113470 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 catctgcaaatccaacaaaa 414 |||||||||||||||||||| Sbjct: 20365 catctgcaaatccaacaaaa 20384
>emb|AL627442.10| Human DNA sequence from clone RP11-296E3 on chromosome 1 Contains the 3' end of the SNX7 gene for sorting nexin7, complete sequence Length = 131815 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatca 513 |||||||||||||||||||| Sbjct: 123887 agaaagcaacaacagcatca 123906
>emb|AL591004.3| Human DNA sequence from clone RP11-497F24 on chromosome 6, complete sequence Length = 159845 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 agaaagcaacaacagcatca 513 |||||||||||||||||||| Sbjct: 114578 agaaagcaacaacagcatca 114559
>emb|AL356378.17| Human DNA sequence from clone RP11-337C18 on chromosome 1 Contains the PRKAB2 gene for protein kinase, AMP-activated, beta 2 non-catalytic subunit protein, a FMO5 gene for the flavin containing monooxygenase 5 protein, the CHD1L gene for chromodomain helicase DNA binding protein 1-like (FLJ22530) protein, a processed pseudogene similar to glucose regulated protein, 58kDa (GRP58), a processed pseudogene similar to chaperonin containing TCP1, subunit 8 (theta) (CCT8) protein, a processed pseudogene similar to ribosomal protein L7a (RPL7A) protein, a processed pseudogene similar to leukotriene B4 12-hydroxydehydrogenase (LTB4DH) protein and three CpG islands, complete sequence Length = 202955 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 aaagcaacaacagcatcaac 515 |||||||||||||||||||| Sbjct: 186947 aaagcaacaacagcatcaac 186966
>emb|AL356096.11| Human DNA sequence from clone RP11-366K1 on chromosome 13 Contains a novel gene and a CpG island, complete sequence Length = 190101 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ccagacattttattcttctg 120 |||||||||||||||||||| Sbjct: 176645 ccagacattttattcttctg 176626
>emb|AL355608.11| Human DNA sequence from clone RP11-567J2 on chromosome 9 Contains part of the ASTN2 gene for astrotactin 2 (KIAA0634) and a novel gene similar to ribosomal protein L10 (RPL10), complete sequence Length = 132590 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 agaaagcaacaacagcatca 513 |||||||||||||||||||| Sbjct: 46113 agaaagcaacaacagcatca 46094
>emb|AL158038.10| Human DNA sequence from clone RP11-298H15 on chromosome 13q21.1-21.3, complete sequence Length = 160015 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 catagaaagcaacaacagca 510 |||||||||||||||||||| Sbjct: 29392 catagaaagcaacaacagca 29373
>emb|AL669871.18| Mouse DNA sequence from clone RP23-48J15 on chromosome 11 Contains a novel gene and a novel pseudogene, complete sequence Length = 208519 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 tggagcctgagccttggaag 463 |||||||||||||||||||| Sbjct: 46257 tggagcctgagccttggaag 46276
>gb|AC046170.6| Homo sapiens chromosome 17, clone RP11-219F9, complete sequence Length = 198470 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 agaagccttgagcttctcct 373 |||||||||||||||||||| Sbjct: 44748 agaagccttgagcttctcct 44729
>gb|AF377865.1| Feline papillomavirus putative transforming protein E6 (E6), putative transforming protein E7 (E7), putative replication protein E1 (E1), and putative regulatory protein E2 (E2) genes, complete cds; putative protein E4 (E4) gene, partial cds; and putative minor capsid protein L2 (L2) and putative major capsid protein L1 (L1) genes, complete cds Length = 8300 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 aaaactgtcaagctccccaa 430 |||||||||||||||||||| Sbjct: 3542 aaaactgtcaagctccccaa 3561
>gb|AC114322.2| Homo sapiens chromosome 5 clone RP11-74D3, complete sequence Length = 133348 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 aaagcaacaacagcatcaac 515 |||||||||||||||||||| Sbjct: 6663 aaagcaacaacagcatcaac 6682
>gb|AC157978.25| Medicago truncatula clone mth2-47l16, complete sequence Length = 125021 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 catctgcaaatccaacaaaa 414 |||||||||||||||||||| Sbjct: 80937 catctgcaaatccaacaaaa 80918
>gb|AC114945.2| Homo sapiens chromosome 5 clone CTD-2604I2, complete sequence Length = 129575 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 aaagcaacaacagcatcaac 515 |||||||||||||||||||| Sbjct: 29551 aaagcaacaacagcatcaac 29532
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 tgagctgactgacagacacc 138 |||||||||||||||||||| Sbjct: 27631 tgagctgactgacagacacc 27612
>gb|AC093294.3| Homo sapiens chromosome 5 clone RP11-524C16, complete sequence Length = 171739 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 agaaagcaacaacagcatca 513 |||||||||||||||||||| Sbjct: 59995 agaaagcaacaacagcatca 59976
>gb|AF480454.1| Felis domesticus papillomavirus type 1, complete genome Length = 8300 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 aaaactgtcaagctccccaa 430 |||||||||||||||||||| Sbjct: 3682 aaaactgtcaagctccccaa 3701
>gb|AF064860.2| Homo sapiens chromosome 21 clone PAC 70I24 map 21q22.3, complete sequence Length = 170121 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 agccttggaagtatcagcaa 472 |||||||||||||||||||| Sbjct: 124256 agccttggaagtatcagcaa 124237
>gb|AC026843.9| Homo sapiens chromosome 11, clone RP11-261E12, complete sequence Length = 166287 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 atagaaagcaacaacagcat 511 |||||||||||||||||||| Sbjct: 38299 atagaaagcaacaacagcat 38318
>gb|AC159032.2| Pan troglodytes BAC clone CH251-358H13 from chromosome unknown, complete sequence Length = 183880 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ccttgagcttctcctccaac 378 |||||||||||||||||||| Sbjct: 60034 ccttgagcttctcctccaac 60053
>gb|AC021269.4|AC021269 Homo sapiens, clone RP11-15D14, complete sequence Length = 144609 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 atagaaagcaacaacagcat 511 |||||||||||||||||||| Sbjct: 131829 atagaaagcaacaacagcat 131848
>emb|CR376864.1| Pan troglodytes chromosome X BAC PTB-045G22, complete sequence Length = 151492 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 agaaagcaacaacagcatca 513 |||||||||||||||||||| Sbjct: 150677 agaaagcaacaacagcatca 150658
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 tgagctgactgacagacacc 138 |||||||||||||||||||| Sbjct: 7274270 tgagctgactgacagacacc 7274251
>gb|AC139026.4| Homo sapiens chromosome 17, clone CTD-2514I13, complete sequence Length = 226696 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 agaagccttgagcttctcct 373 |||||||||||||||||||| Sbjct: 36110 agaagccttgagcttctcct 36129
>emb|BX005183.9| Zebrafish DNA sequence from clone CH211-136A14 in linkage group 3, complete sequence Length = 168366 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 aaatccaacaaaactgtcaa 421 |||||||||||||||||||| Sbjct: 53125 aaatccaacaaaactgtcaa 53106
>gb|AC069164.11|AC069164 Homo sapiens chromosome 13 clone RP11-338F18, complete sequence Length = 169903 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ccagacattttattcttctg 120 |||||||||||||||||||| Sbjct: 25189 ccagacattttattcttctg 25170
>gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, complete sequence Length = 223367 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 agccttgagcttctcctcca 376 |||||||||||||||||||| Sbjct: 103270 agccttgagcttctcctcca 103251
>gb|AC010739.3| Homo sapiens BAC clone RP11-478M12 from 2, complete sequence Length = 180226 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 492 atagaaagcaacaacagcatcaac 515 |||||||||||||||| ||||||| Sbjct: 79467 atagaaagcaacaacatcatcaac 79444
>gb|AC135972.11| Homo sapiens chromosome 17, clone CTD-2530H17, complete sequence Length = 158617 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 agaagccttgagcttctcct 373 |||||||||||||||||||| Sbjct: 105927 agaagccttgagcttctcct 105908
>gb|AC004098.1|AC004098 Homo sapiens chromosome 17, clone HCIT305D20, complete sequence Length = 166978 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 agaagccttgagcttctcct 373 |||||||||||||||||||| Sbjct: 43719 agaagccttgagcttctcct 43700
>dbj|AP000416.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLE3 Length = 3059 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 catctgcaaatccaacaaaa 414 |||||||||||||||||||| Sbjct: 725 catctgcaaatccaacaaaa 706
>gb|AC022497.18| Homo sapiens 3 BAC RP11-80P20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147816 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 aaaactccacttgcaattgc 545 |||||||||||||||||||| Sbjct: 72541 aaaactccacttgcaattgc 72522
>emb|AL954227.3|RP43002I19 Pan troglodytes chromosome 22 BAC RP43-002I19, complete sequence Length = 192219 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 agccttggaagtatcagcaa 472 |||||||||||||||||||| Sbjct: 120819 agccttggaagtatcagcaa 120800
>gb|AF027390.1|AF027390 Homo sapiens 7q telomere, complete sequence Length = 225432 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 agaaagcaacaacagcatca 513 |||||||||||||||||||| Sbjct: 174922 agaaagcaacaacagcatca 174941
>emb|AL844199.8| Mouse DNA sequence from clone RP23-39F22 on chromosome 4, complete sequence Length = 205589 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 ttctgagctgactgacagacacca 139 |||||||||||| ||||||||||| Sbjct: 142386 ttctgagctgacagacagacacca 142409 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,735,442 Number of Sequences: 3902068 Number of extensions: 5735442 Number of successful extensions: 127128 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 126735 Number of HSP's gapped (non-prelim): 390 length of query: 657 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 634 effective length of database: 17,143,297,704 effective search space: 10868850744336 effective search space used: 10868850744336 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)