ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4j06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472940.1| Oryza sativa (japonica cultivar-group), predic... 244 3e-61
2dbj|AK103052.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 3e-61
3dbj|AK101208.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 3e-61
4emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4,... 220 5e-54
5emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4,... 220 5e-54
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 220 5e-54
7emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 220 5e-54
8gb|AY106503.1| Zea mays PCO078532 mRNA sequence 121 3e-24
9ref|XM_479842.1| Oryza sativa (japonica cultivar-group), mRNA 64 7e-07
10ref|XM_507105.1| PREDICTED Oryza sativa (japonica cultivar-group... 64 7e-07
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 64 7e-07
12dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic D... 64 7e-07
13dbj|AP005730.2| Oryza sativa (japonica cultivar-group) genomic D... 64 7e-07
14dbj|AP006617.2| Oryza sativa (japonica cultivar-group) genomic D... 64 7e-07
15emb|AJ312315.1|OSA312315 Oryza sativa putative B'teta gene for p... 64 7e-07
16dbj|AK067159.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 7e-07
17dbj|AK060794.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 3e-06
18ref|XM_470388.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.15
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.15
20gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genom... 46 0.15
21emb|AL355522.11| Human DNA sequence from clone RP11-546O15 on ch... 46 0.15
22dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
23emb|AJ312314.1|OSA312314 Oryza sativa putative B'zeta gene for p... 46 0.15
24dbj|AK070337.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.15
25gb|AC140783.4| Mus musculus BAC clone RP24-253K16 from chromosom... 44 0.61
26gb|AC137905.8| Mus musculus chromosome 15, clone RP23-334B11, co... 44 0.61
27ref|NM_005035.2| Homo sapiens polymerase (RNA) mitochondrial (DN... 42 2.4
28ref|XM_477422.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.4
29gb|BC070057.1| Homo sapiens cDNA clone IMAGE:5296766, containing... 42 2.4
30gb|BC098387.1| Homo sapiens polymerase (RNA) mitochondrial (DNA ... 42 2.4
31gb|AC105452.3| Homo sapiens BAC clone RP11-122J10 from 4, comple... 42 2.4
32dbj|AK121258.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
33dbj|AK068665.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
34gb|BC030829.1| Homo sapiens cDNA clone IMAGE:4799009, containing... 42 2.4
35gb|AC004449.1|AC004449 Homo sapiens chromosome 19, cosmid R33683... 42 2.4
36gb|U75370.1|HSU75370 Human mitochondrial RNA polymerase mRNA, nu... 42 2.4
37dbj|AB209920.1| Homo sapiens mRNA for DNA-directed RNA polymeras... 42 2.4
38emb|AL772131.5| Mouse DNA sequence from clone RP23-472I13 on chr... 42 2.4
39ref|NM_113506.1| Arabidopsis thaliana protein phosphatase type 2... 40 9.5
40ref|NM_001035693.1| Arabidopsis thaliana protein phosphatase typ... 40 9.5
41gb|AC133004.4| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
42gb|AC154314.2| Mus musculus BAC clone RP23-347J22 from chromosom... 40 9.5
43gb|AC164547.4| Mus musculus BAC clone RP24-198D11 from chromosom... 40 9.5
44gb|AF100664.1| Caenorhabditis elegans cosmid M57, complete sequence 40 9.5
45gb|AE013187.1| Thermoanaerobacter tengcongensis MB4, section 214... 40 9.5
46gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, comp... 40 9.5
47emb|CR450724.10| Zebrafish DNA sequence from clone DKEY-168I4 in... 40 9.5
48gb|AC121082.13| Mus musculus chromosome 7, clone RP23-32F14, com... 40 9.5
49ref|XM_720862.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 9.5
50ref|XM_735576.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 9.5
51ref|XM_675214.1| Plasmodium berghei strain ANKA hypothetical pro... 40 9.5
52gb|AC159263.3| Mus musculus BAC clone RP24-66K21 from chromosome... 40 9.5
53gb|AC123572.15| Medicago truncatula clone mth2-2b2, complete seq... 40 9.5
54emb|BX284668.4| Human DNA sequence from clone RP11-108M9 on chro... 40 9.5
55gb|AE016828.2| Coxiella burnetii RSA 493, complete genome 40 9.5
56gb|AC099842.2| Homo sapiens chromosome 11, clone RP11-747E23, co... 40 9.5
57gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 9.5
58gb|AC100769.2| Homo sapiens chromosome 11, clone RP11-701P23, co... 40 9.5
59gb|AC063933.13| Homo sapiens 3 BAC RP11-566A3 (Roswell Park Canc... 40 9.5
60gb|AY059158.1| Arabidopsis thaliana AT3g26020/MPE11_17 mRNA, com... 40 9.5
61gb|AF367267.1|AF367267 Arabidopsis thaliana AT3g26020/MPE11_17 m... 40 9.5
62tpg|BK000438.1| TPA: TPA_exp: Homo sapiens RING finger protein C... 40 9.5
63dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
64dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
65gb|AC093911.2| Homo sapiens BAC clone RP11-765B12 from 2, comple... 40 9.5
66dbj|AP005673.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
67dbj|AB023041.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 9.5
68gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 9.5
69emb|BX247951.11| Zebrafish DNA sequence from clone DKEY-246A16 i... 40 9.5
70gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
71emb|AL590723.13| Human DNA sequence from clone RP11-492I21 on ch... 40 9.5
72gb|AC140293.4| Mus musculus BAC clone RP24-328A10 from 13, compl... 40 9.5
73gb|AC171003.2| Mus musculus BAC clone RP23-207H9 from chromosome... 40 9.5 
>ref|XM_472940.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1530

 Score =  244 bits (123), Expect = 3e-61
 Identities = 279/327 (85%), Gaps = 3/327 (0%)
 Strand = Plus / Minus

                                                                        
Query: 371  ttcctccaggcgcttccacagcgcctcccgcttcgaactggactcctcctgcttgagctc 430
            |||||| | |||||||||||  || || ||||||||| | || || ||||||||||| ||
Sbjct: 1455 ttcctctaagcgcttccacaaagcttctcgcttcgaattagattcttcctgcttgagttc 1396

                                                                        
Query: 431  gtcgtcgtcgaacttctgcatgcactccccaaaaaacgtggaatcgtgatcggtgaagat 490
             ||||||| |||||||||  |||||||||| ||||| |  ||||| ||||| | ||||||
Sbjct: 1395 atcgtcgttgaacttctgtgtgcactccccgaaaaatgcagaatcatgatctgagaagat 1336

                                                                        
Query: 491  cttgcgcacattcagtgtcaggctccgaacagcttggttccagtgaccccgcgcatttct 550
            |||||| || |||||||||||||| ||||| |||||||||||||||||||  ||||| ||
Sbjct: 1335 cttgcgtacgttcagtgtcaggcttcgaactgcttggttccagtgaccccttgcattcct 1276

                                                                        
Query: 551  ttcgagcgcggggaagatgatgggtagtatcacctttgtagttctgcttgattaagttct 610
             || ||||| || ||||| ||||||| ||||||| ||||| |||||||| ||||||||||
Sbjct: 1275 ctcaagcgcaggaaagataatgggtaatatcacc-ttgtaattctgcttaattaagttct 1217

                                                                        
Query: 611  caatgtggtccgttgttccatagaaacagtgcccgctctgccacctgggaagtgcgagct 670
            ||||||||| | |||||||| |||||||| |||||||||||||||| |||| || |||||
Sbjct: 1216 caatgtggt-cattgttccaaagaaacagcgcccgctctgccacct-ggaaatgtgagct 1159

                                       
Query: 671  gttcatgctactagcaatctgacggaa 697
             ||||||||||  ||||||||||||||
Sbjct: 1158 attcatgctacaggcaatctgacggaa 1132
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>dbj|AK103052.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117I03, full
            insert sequence
          Length = 2372

 Score =  244 bits (123), Expect = 3e-61
 Identities = 279/327 (85%), Gaps = 3/327 (0%)
 Strand = Plus / Minus

                                                                        
Query: 371  ttcctccaggcgcttccacagcgcctcccgcttcgaactggactcctcctgcttgagctc 430
            |||||| | |||||||||||  || || ||||||||| | || || ||||||||||| ||
Sbjct: 2028 ttcctctaagcgcttccacaaagcttctcgcttcgaattagattcttcctgcttgagttc 1969

                                                                        
Query: 431  gtcgtcgtcgaacttctgcatgcactccccaaaaaacgtggaatcgtgatcggtgaagat 490
             ||||||| |||||||||  |||||||||| ||||| |  ||||| ||||| | ||||||
Sbjct: 1968 atcgtcgttgaacttctgtgtgcactccccgaaaaatgcagaatcatgatctgagaagat 1909

                                                                        
Query: 491  cttgcgcacattcagtgtcaggctccgaacagcttggttccagtgaccccgcgcatttct 550
            |||||| || |||||||||||||| ||||| |||||||||||||||||||  ||||| ||
Sbjct: 1908 cttgcgtacgttcagtgtcaggcttcgaactgcttggttccagtgaccccttgcattcct 1849

                                                                        
Query: 551  ttcgagcgcggggaagatgatgggtagtatcacctttgtagttctgcttgattaagttct 610
             || ||||| || ||||| ||||||| ||||||| ||||| |||||||| ||||||||||
Sbjct: 1848 ctcaagcgcaggaaagataatgggtaatatcacc-ttgtaattctgcttaattaagttct 1790

                                                                        
Query: 611  caatgtggtccgttgttccatagaaacagtgcccgctctgccacctgggaagtgcgagct 670
            ||||||||| | |||||||| |||||||| |||||||||||||||| |||| || |||||
Sbjct: 1789 caatgtggt-cattgttccaaagaaacagcgcccgctctgccacct-ggaaatgtgagct 1732

                                       
Query: 671  gttcatgctactagcaatctgacggaa 697
             ||||||||||  ||||||||||||||
Sbjct: 1731 attcatgctacaggcaatctgacggaa 1705



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 57/66 (86%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                        
Query: 131  ttttgatcatgcagtcctcgcgaaaccaaatacacccctacccgcctagaacagggggga 190
            |||| |||||||||| |||  ||||||||| ||| || ||||||||||||||| ||||||
Sbjct: 2269 ttttcatcatgcagttctcaggaaaccaaagacatcc-tacccgcctagaacaaggggga 2211

                  
Query: 191  agccaa 196
            | ||||
Sbjct: 2210 aaccaa 2205
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>dbj|AK101208.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031A03, full
            insert sequence
          Length = 1845

 Score =  244 bits (123), Expect = 3e-61
 Identities = 279/327 (85%), Gaps = 3/327 (0%)
 Strand = Plus / Minus

                                                                        
Query: 371  ttcctccaggcgcttccacagcgcctcccgcttcgaactggactcctcctgcttgagctc 430
            |||||| | |||||||||||  || || ||||||||| | || || ||||||||||| ||
Sbjct: 1501 ttcctctaagcgcttccacaaagcttctcgcttcgaattagattcttcctgcttgagttc 1442

                                                                        
Query: 431  gtcgtcgtcgaacttctgcatgcactccccaaaaaacgtggaatcgtgatcggtgaagat 490
             ||||||| |||||||||  |||||||||| ||||| |  ||||| ||||| | ||||||
Sbjct: 1441 atcgtcgttgaacttctgtgtgcactccccgaaaaatgcagaatcatgatctgagaagat 1382

                                                                        
Query: 491  cttgcgcacattcagtgtcaggctccgaacagcttggttccagtgaccccgcgcatttct 550
            |||||| || |||||||||||||| ||||| |||||||||||||||||||  ||||| ||
Sbjct: 1381 cttgcgtacgttcagtgtcaggcttcgaactgcttggttccagtgaccccttgcattcct 1322

                                                                        
Query: 551  ttcgagcgcggggaagatgatgggtagtatcacctttgtagttctgcttgattaagttct 610
             || ||||| || ||||| ||||||| ||||||| ||||| |||||||| ||||||||||
Sbjct: 1321 ctcaagcgcaggaaagataatgggtaatatcacc-ttgtaattctgcttaattaagttct 1263

                                                                        
Query: 611  caatgtggtccgttgttccatagaaacagtgcccgctctgccacctgggaagtgcgagct 670
            ||||||||| | |||||||| |||||||| |||||||||||||||| |||| || |||||
Sbjct: 1262 caatgtggt-cattgttccaaagaaacagcgcccgctctgccacct-ggaaatgtgagct 1205

                                       
Query: 671  gttcatgctactagcaatctgacggaa 697
             ||||||||||  ||||||||||||||
Sbjct: 1204 attcatgctacaggcaatctgacggaa 1178



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 57/66 (86%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                        
Query: 131  ttttgatcatgcagtcctcgcgaaaccaaatacacccctacccgcctagaacagggggga 190
            |||| |||||||||| |||  ||||||||| ||| || ||||||||||||||| ||||||
Sbjct: 1742 ttttcatcatgcagttctcaggaaaccaaagacatcc-tacccgcctagaacaaggggga 1684

                  
Query: 191  agccaa 196
            | ||||
Sbjct: 1683 aaccaa 1678
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>emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000223_09,
             complete sequence
          Length = 120583

 Score =  220 bits (111), Expect = 5e-54
 Identities = 248/291 (85%), Gaps = 2/291 (0%)
 Strand = Plus / Plus

                                                                         
Query: 371   ttcctccaggcgcttccacagcgcctcccgcttcgaactggactcctcctgcttgagctc 430
             |||||| | |||||||||||  || || ||||||||| | || || ||||||||||| ||
Sbjct: 41984 ttcctctaagcgcttccacaaagcttctcgcttcgaattagattcttcctgcttgagttc 42043

                                                                         
Query: 431   gtcgtcgtcgaacttctgcatgcactccccaaaaaacgtggaatcgtgatcggtgaagat 490
              ||||||| |||||||||  |||||||||| ||||| |  ||||| ||||| | ||||||
Sbjct: 42044 atcgtcgttgaacttctgtgtgcactccccgaaaaatgcagaatcatgatctgagaagat 42103

                                                                         
Query: 491   cttgcgcacattcagtgtcaggctccgaacagcttggttccagtgaccccgcgcatttct 550
             |||||| || |||||||||||||| ||||| |||||||||||||||||||  ||||| ||
Sbjct: 42104 cttgcgtacgttcagtgtcaggcttcgaactgcttggttccagtgaccccttgcattcct 42163

                                                                         
Query: 551   ttcgagcgcggggaagatgatgggtagtatcacctttgtagttctgcttgattaagttct 610
              || ||||| || ||||| ||||||| ||||||| ||||| |||||||| ||||||||||
Sbjct: 42164 ctcaagcgcaggaaagataatgggtaatatcacc-ttgtaattctgcttaattaagttct 42222

                                                                
Query: 611   caatgtggtccgttgttccatagaaacagtgcccgctctgccacctgggaa 661
             ||||||||| | |||||||| |||||||| |||||||||||||||| ||||
Sbjct: 42223 caatgtggt-cattgttccaaagaaacagcgcccgctctgccacctaggaa 42272



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 57/66 (86%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                         
Query: 131   ttttgatcatgcagtcctcgcgaaaccaaatacacccctacccgcctagaacagggggga 190
             |||| |||||||||| |||  ||||||||| ||| || ||||||||||||||| ||||||
Sbjct: 41743 ttttcatcatgcagttctcaggaaaccaaagacatcc-tacccgcctagaacaaggggga 41801

                   
Query: 191   agccaa 196
             | ||||
Sbjct: 41802 aaccaa 41807



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 666   gagctgttcatgctactagcaatctgacggaa 697
             ||||| ||||||||||  ||||||||||||||
Sbjct: 43664 gagctattcatgctacaggcaatctgacggaa 43695
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>emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081L15,
              complete sequence
          Length = 150864

 Score =  220 bits (111), Expect = 5e-54
 Identities = 248/291 (85%), Gaps = 2/291 (0%)
 Strand = Plus / Plus

                                                                          
Query: 371    ttcctccaggcgcttccacagcgcctcccgcttcgaactggactcctcctgcttgagctc 430
              |||||| | |||||||||||  || || ||||||||| | || || ||||||||||| ||
Sbjct: 108797 ttcctctaagcgcttccacaaagcttctcgcttcgaattagattcttcctgcttgagttc 108856

                                                                          
Query: 431    gtcgtcgtcgaacttctgcatgcactccccaaaaaacgtggaatcgtgatcggtgaagat 490
               ||||||| |||||||||  |||||||||| ||||| |  ||||| ||||| | ||||||
Sbjct: 108857 atcgtcgttgaacttctgtgtgcactccccgaaaaatgcagaatcatgatctgagaagat 108916

                                                                          
Query: 491    cttgcgcacattcagtgtcaggctccgaacagcttggttccagtgaccccgcgcatttct 550
              |||||| || |||||||||||||| ||||| |||||||||||||||||||  ||||| ||
Sbjct: 108917 cttgcgtacgttcagtgtcaggcttcgaactgcttggttccagtgaccccttgcattcct 108976

                                                                          
Query: 551    ttcgagcgcggggaagatgatgggtagtatcacctttgtagttctgcttgattaagttct 610
               || ||||| || ||||| ||||||| ||||||| ||||| |||||||| ||||||||||
Sbjct: 108977 ctcaagcgcaggaaagataatgggtaatatcacc-ttgtaattctgcttaattaagttct 109035

                                                                 
Query: 611    caatgtggtccgttgttccatagaaacagtgcccgctctgccacctgggaa 661
              ||||||||| | |||||||| |||||||| |||||||||||||||| ||||
Sbjct: 109036 caatgtggt-cattgttccaaagaaacagcgcccgctctgccacctaggaa 109085



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 57/66 (86%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                          
Query: 131    ttttgatcatgcagtcctcgcgaaaccaaatacacccctacccgcctagaacagggggga 190
              |||| |||||||||| |||  ||||||||| ||| || ||||||||||||||| ||||||
Sbjct: 108556 ttttcatcatgcagttctcaggaaaccaaagacatcc-tacccgcctagaacaaggggga 108614

                    
Query: 191    agccaa 196
              | ||||
Sbjct: 108615 aaccaa 108620



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 666    gagctgttcatgctactagcaatctgacggaa 697
              ||||| ||||||||||  ||||||||||||||
Sbjct: 110477 gagctattcatgctacaggcaatctgacggaa 110508
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  220 bits (111), Expect = 5e-54
 Identities = 248/291 (85%), Gaps = 2/291 (0%)
 Strand = Plus / Plus

                                                                            
Query: 371      ttcctccaggcgcttccacagcgcctcccgcttcgaactggactcctcctgcttgagctc 430
                |||||| | |||||||||||  || || ||||||||| | || || ||||||||||| ||
Sbjct: 24219572 ttcctctaagcgcttccacaaagcttctcgcttcgaattagattcttcctgcttgagttc 24219631

                                                                            
Query: 431      gtcgtcgtcgaacttctgcatgcactccccaaaaaacgtggaatcgtgatcggtgaagat 490
                 ||||||| |||||||||  |||||||||| ||||| |  ||||| ||||| | ||||||
Sbjct: 24219632 atcgtcgttgaacttctgtgtgcactccccgaaaaatgcagaatcatgatctgagaagat 24219691

                                                                            
Query: 491      cttgcgcacattcagtgtcaggctccgaacagcttggttccagtgaccccgcgcatttct 550
                |||||| || |||||||||||||| ||||| |||||||||||||||||||  ||||| ||
Sbjct: 24219692 cttgcgtacgttcagtgtcaggcttcgaactgcttggttccagtgaccccttgcattcct 24219751

                                                                            
Query: 551      ttcgagcgcggggaagatgatgggtagtatcacctttgtagttctgcttgattaagttct 610
                 || ||||| || ||||| ||||||| ||||||| ||||| |||||||| ||||||||||
Sbjct: 24219752 ctcaagcgcaggaaagataatgggtaatatcacc-ttgtaattctgcttaattaagttct 24219810

                                                                   
Query: 611      caatgtggtccgttgttccatagaaacagtgcccgctctgccacctgggaa 661
                ||||||||| | |||||||| |||||||| |||||||||||||||| ||||
Sbjct: 24219811 caatgtggt-cattgttccaaagaaacagcgcccgctctgccacctaggaa 24219860



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 57/66 (86%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                            
Query: 131      ttttgatcatgcagtcctcgcgaaaccaaatacacccctacccgcctagaacagggggga 190
                |||| |||||||||| |||  ||||||||| ||| || ||||||||||||||| ||||||
Sbjct: 24219331 ttttcatcatgcagttctcaggaaaccaaagacatcc-tacccgcctagaacaaggggga 24219389

                      
Query: 191      agccaa 196
                | ||||
Sbjct: 24219390 aaccaa 24219395



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 666      gagctgttcatgctactagcaatctgacggaa 697
                ||||| ||||||||||  ||||||||||||||
Sbjct: 24221252 gagctattcatgctacaggcaatctgacggaa 24221283
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>emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811E11, complete
             sequence
          Length = 59348

 Score =  220 bits (111), Expect = 5e-54
 Identities = 248/291 (85%), Gaps = 2/291 (0%)
 Strand = Plus / Plus

                                                                         
Query: 371   ttcctccaggcgcttccacagcgcctcccgcttcgaactggactcctcctgcttgagctc 430
             |||||| | |||||||||||  || || ||||||||| | || || ||||||||||| ||
Sbjct: 14027 ttcctctaagcgcttccacaaagcttctcgcttcgaattagattcttcctgcttgagttc 14086

                                                                         
Query: 431   gtcgtcgtcgaacttctgcatgcactccccaaaaaacgtggaatcgtgatcggtgaagat 490
              ||||||| |||||||||  |||||||||| ||||| |  ||||| ||||| | ||||||
Sbjct: 14087 atcgtcgttgaacttctgtgtgcactccccgaaaaatgcagaatcatgatctgagaagat 14146

                                                                         
Query: 491   cttgcgcacattcagtgtcaggctccgaacagcttggttccagtgaccccgcgcatttct 550
             |||||| || |||||||||||||| ||||| |||||||||||||||||||  ||||| ||
Sbjct: 14147 cttgcgtacgttcagtgtcaggcttcgaactgcttggttccagtgaccccttgcattcct 14206

                                                                         
Query: 551   ttcgagcgcggggaagatgatgggtagtatcacctttgtagttctgcttgattaagttct 610
              || ||||| || ||||| ||||||| ||||||| ||||| |||||||| ||||||||||
Sbjct: 14207 ctcaagcgcaggaaagataatgggtaatatcacc-ttgtaattctgcttaattaagttct 14265

                                                                
Query: 611   caatgtggtccgttgttccatagaaacagtgcccgctctgccacctgggaa 661
             ||||||||| | |||||||| |||||||| |||||||||||||||| ||||
Sbjct: 14266 caatgtggt-cattgttccaaagaaacagcgcccgctctgccacctaggaa 14315



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 57/66 (86%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                         
Query: 131   ttttgatcatgcagtcctcgcgaaaccaaatacacccctacccgcctagaacagggggga 190
             |||| |||||||||| |||  ||||||||| ||| || ||||||||||||||| ||||||
Sbjct: 13786 ttttcatcatgcagttctcaggaaaccaaagacatcc-tacccgcctagaacaaggggga 13844

                   
Query: 191   agccaa 196
             | ||||
Sbjct: 13845 aaccaa 13850



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 666   gagctgttcatgctactagcaatctgacggaa 697
             ||||| ||||||||||  ||||||||||||||
Sbjct: 15707 gagctattcatgctacaggcaatctgacggaa 15738
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>gb|AY106503.1| Zea mays PCO078532 mRNA sequence
          Length = 836

 Score =  121 bits (61), Expect = 3e-24
 Identities = 257/317 (81%), Gaps = 4/317 (1%)
 Strand = Plus / Minus

                                                                       
Query: 366 cccatttcctccaggcgctt-ccacagcgcctcccgcttcgaactggactcctcctgctt 424
           |||||||||||||||||||| |||||  || || || || |||   || ||| |||||||
Sbjct: 655 cccatttcctccaggcgctttccacatggcgtctcgttttgaatcagattccgcctgctt 596

                                                                       
Query: 425 gagctcgtcgtcgtcgaacttctgcatgcactccccaaaaaacgtggaatcgtgatcggt 484
           |||||| |||||   |||| |||| | ||||||||| || || |||||||| || || | 
Sbjct: 595 gagctcctcgtcactgaacctctggacgcactccccgaagaatgtggaatcatggtctga 536

                                                                       
Query: 485 gaagatcttgcgcacattcagtgtcaggctccgaacagcttggttccagtgaccccgcgc 544
           |||||||||||| || |||||||||||||| || |||||||||||||||||| | |  | 
Sbjct: 535 gaagatcttgcgtacgttcagtgtcaggctacggacagcttggttccagtgatctctgga 476

                                                                       
Query: 545 atttctttcgagcgcggggaagatgatgggtagtatcacctttgtagttctgcttgatta 604
            ||||| ||||| || ||  ||||||| ||||  | |||| |||||||| ||||| ||||
Sbjct: 475 gtttctctcgagtgctggatagatgatcggtaacagcacc-ttgtagttttgcttaatta 417

                                                                       
Query: 605 agttctcaatgtggtccgttgttccatagaaacagtgcccgctctgccacctgggaagtg 664
            | | ||||| |||| | |||||||| |||||||| |||||||||||||||| |||| ||
Sbjct: 416 gggtttcaatatggt-cattgttccagagaaacagagcccgctctgccacct-ggaaatg 359

                            
Query: 665 cgagctgttcatgctac 681
             |||||||||||||||
Sbjct: 358 aaagctgttcatgctac 342
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>ref|XM_479842.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2284

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 76/88 (86%), Gaps = 2/88 (2%)
 Strand = Plus / Minus

                                                                        
Query: 570  atgggtagtatcacctttgtagttctgcttgattaagttctcaatgtggtccgttgttcc 629
            ||||| |||||||||||  | |||||||||||| |||  |||||| ||||| ||||||||
Sbjct: 1447 atgggcagtatcaccttgct-gttctgcttgatcaagacctcaatatggtc-gttgttcc 1390

                                        
Query: 630  atagaaacagtgcccgctctgccacctg 657
            | |||||||| || ||||||||||||||
Sbjct: 1389 acagaaacagagctcgctctgccacctg 1362
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>ref|XM_507105.1| PREDICTED Oryza sativa (japonica cultivar-group), B1203H11.34 mRNA
          Length = 2549

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 76/88 (86%), Gaps = 2/88 (2%)
 Strand = Plus / Minus

                                                                        
Query: 570  atgggtagtatcacctttgtagttctgcttgattaagttctcaatgtggtccgttgttcc 629
            ||||| |||||||||||  | |||||||||||| |||  |||||| ||||| ||||||||
Sbjct: 1707 atgggcagtatcaccttgct-gttctgcttgatcaagacctcaatatggtc-gttgttcc 1650

                                        
Query: 630  atagaaacagtgcccgctctgccacctg 657
            | |||||||| || ||||||||||||||
Sbjct: 1649 acagaaacagagctcgctctgccacctg 1622
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 76/88 (86%), Gaps = 2/88 (2%)
 Strand = Plus / Plus

                                                                           
Query: 570     atgggtagtatcacctttgtagttctgcttgattaagttctcaatgtggtccgttgttcc 629
               ||||| |||||||||||  | |||||||||||| |||  |||||| ||||| ||||||||
Sbjct: 1200383 atgggcagtatcaccttgct-gttctgcttgatcaagacctcaatatggtc-gttgttcc 1200440

                                           
Query: 630     atagaaacagtgcccgctctgccacctg 657
               | |||||||| || ||||||||||||||
Sbjct: 1200441 acagaaacagagctcgctctgccacctg 1200468
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>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1203H11
          Length = 156561

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 76/88 (86%), Gaps = 2/88 (2%)
 Strand = Plus / Plus

                                                                          
Query: 570    atgggtagtatcacctttgtagttctgcttgattaagttctcaatgtggtccgttgttcc 629
              ||||| |||||||||||  | |||||||||||| |||  |||||| ||||| ||||||||
Sbjct: 113620 atgggcagtatcaccttgct-gttctgcttgatcaagacctcaatatggtc-gttgttcc 113677

                                          
Query: 630    atagaaacagtgcccgctctgccacctg 657
              | |||||||| || ||||||||||||||
Sbjct: 113678 acagaaacagagctcgctctgccacctg 113705
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>dbj|AP005730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0073J19
          Length = 165174

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 76/88 (86%), Gaps = 2/88 (2%)
 Strand = Plus / Plus

                                                                         
Query: 570   atgggtagtatcacctttgtagttctgcttgattaagttctcaatgtggtccgttgttcc 629
             ||||| |||||||||||  | |||||||||||| |||  |||||| ||||| ||||||||
Sbjct: 29690 atgggcagtatcaccttgct-gttctgcttgatcaagacctcaatatggtc-gttgttcc 29747

                                         
Query: 630   atagaaacagtgcccgctctgccacctg 657
             | |||||||| || ||||||||||||||
Sbjct: 29748 acagaaacagagctcgctctgccacctg 29775
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>dbj|AP006617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0091F23
          Length = 147699

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 76/88 (86%), Gaps = 2/88 (2%)
 Strand = Plus / Plus

                                                                         
Query: 570   atgggtagtatcacctttgtagttctgcttgattaagttctcaatgtggtccgttgttcc 629
             ||||| |||||||||||  | |||||||||||| |||  |||||| ||||| ||||||||
Sbjct: 67462 atgggcagtatcaccttgct-gttctgcttgatcaagacctcaatatggtc-gttgttcc 67519

                                         
Query: 630   atagaaacagtgcccgctctgccacctg 657
             | |||||||| || ||||||||||||||
Sbjct: 67520 acagaaacagagctcgctctgccacctg 67547
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>emb|AJ312315.1|OSA312315 Oryza sativa putative B'teta gene for protein phosphatase 2A B'teta
            subunit, exons 1-2
          Length = 3753

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 76/88 (86%), Gaps = 2/88 (2%)
 Strand = Plus / Minus

                                                                        
Query: 570  atgggtagtatcacctttgtagttctgcttgattaagttctcaatgtggtccgttgttcc 629
            ||||| |||||||||||  | |||||||||||| |||  |||||| ||||| ||||||||
Sbjct: 3016 atgggcagtatcaccttgct-gttctgcttgatcaagacctcaatatggtc-gttgttcc 2959

                                        
Query: 630  atagaaacagtgcccgctctgccacctg 657
            | |||||||| || ||||||||||||||
Sbjct: 2958 acagaaacagagctcgctctgccacctg 2931
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>dbj|AK067159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096J23, full
            insert sequence
          Length = 2549

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 76/88 (86%), Gaps = 2/88 (2%)
 Strand = Plus / Minus

                                                                        
Query: 570  atgggtagtatcacctttgtagttctgcttgattaagttctcaatgtggtccgttgttcc 629
            ||||| |||||||||||  | |||||||||||| |||  |||||| ||||| ||||||||
Sbjct: 1707 atgggcagtatcaccttgct-gttctgcttgatcaagacctcaatatggtc-gttgttcc 1650

                                        
Query: 630  atagaaacagtgcccgctctgccacctg 657
            | |||||||| || ||||||||||||||
Sbjct: 1649 acagaaacagagctcgctctgccacctg 1622
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>dbj|AK060794.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E07, full
            insert sequence
          Length = 2284

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 59/67 (88%), Gaps = 1/67 (1%)
 Strand = Plus / Minus

                                                                        
Query: 591  gttctgcttgattaagttctcaatgtggtccgttgttccatagaaacagtgcccgctctg 650
            |||||||||||| |||  |||||| ||||| ||||||||| |||||||| || |||||||
Sbjct: 1427 gttctgcttgatcaagacctcaatatggtc-gttgttccacagaaacagagctcgctctg 1369

                   
Query: 651  ccacctg 657
            |||||||
Sbjct: 1368 ccacctg 1362
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>ref|XM_470388.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2538

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                        
Query: 498  acattcagtgtcaggctccgaacagcttggttccagtgaccccgcgcatttctttcgagc 557
            ||||| ||||| |||||  | ||||||||||||||||| ||    |||||||| ||||| 
Sbjct: 1906 acattaagtgtgaggctttgcacagcttggttccagtgcccattagcatttctctcgagt 1847

                               
Query: 558  gcggggaagatgatgggta 576
            || ||||||||||| ||||
Sbjct: 1846 gcagggaagatgataggta 1828
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                            
Query: 498      acattcagtgtcaggctccgaacagcttggttccagtgaccccgcgcatttctttcgagc 557
                ||||| ||||| |||||  | ||||||||||||||||| ||    |||||||| ||||| 
Sbjct: 35198869 acattaagtgtgaggctttgcacagcttggttccagtgcccattagcatttctctcgagt 35198810

                                   
Query: 558      gcggggaagatgatgggta 576
                || ||||||||||| ||||
Sbjct: 35198809 gcagggaagatgataggta 35198791
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>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete
             sequence
          Length = 156606

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                         
Query: 498   acattcagtgtcaggctccgaacagcttggttccagtgaccccgcgcatttctttcgagc 557
             ||||| ||||| |||||  | ||||||||||||||||| ||    |||||||| ||||| 
Sbjct: 77630 acattaagtgtgaggctttgcacagcttggttccagtgcccattagcatttctctcgagt 77571

                                
Query: 558   gcggggaagatgatgggta 576
             || ||||||||||| ||||
Sbjct: 77570 gcagggaagatgataggta 77552
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>emb|AL355522.11| Human DNA sequence from clone RP11-546O15 on chromosome 6 Contains the
             3' end of the CLIC5 gene for chloride intracellular
             channel 5, complete sequence
          Length = 182982

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 652   cacctgggaagtgcgagctgttc 674
             |||||||||||||||||||||||
Sbjct: 53054 cacctgggaagtgcgagctgttc 53032
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                            
Query: 498      acattcagtgtcaggctccgaacagcttggttccagtgaccccgcgcatttctttcgagc 557
                ||||| ||||| |||||  | ||||||||||||||||| ||    |||||||| ||||| 
Sbjct: 35288941 acattaagtgtgaggctttgcacagcttggttccagtgcccattagcatttctctcgagt 35288882

                                   
Query: 558      gcggggaagatgatgggta 576
                || ||||||||||| ||||
Sbjct: 35288881 gcagggaagatgataggta 35288863
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>emb|AJ312314.1|OSA312314 Oryza sativa putative B'zeta gene for protein phosphatase 2A B'zeta
            subunit, exons 1-2
          Length = 4118

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                        
Query: 498  acattcagtgtcaggctccgaacagcttggttccagtgaccccgcgcatttctttcgagc 557
            ||||| ||||| |||||  | ||||||||||||||||| ||    |||||||| ||||| 
Sbjct: 3492 acattaagtgtgaggctttgcacagcttggttccagtgcccattagcatttctctcgagt 3433

                               
Query: 558  gcggggaagatgatgggta 576
            || ||||||||||| ||||
Sbjct: 3432 gcagggaagatgataggta 3414
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>dbj|AK070337.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047K16, full
            insert sequence
          Length = 2541

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                        
Query: 498  acattcagtgtcaggctccgaacagcttggttccagtgaccccgcgcatttctttcgagc 557
            ||||| ||||| |||||  | ||||||||||||||||| ||    |||||||| ||||| 
Sbjct: 1909 acattaagtgtgaggctttgcacagcttggttccagtgcccattagcatttctctcgagt 1850

                               
Query: 558  gcggggaagatgatgggta 576
            || ||||||||||| ||||
Sbjct: 1849 gcagggaagatgataggta 1831
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>gb|AC140783.4| Mus musculus BAC clone RP24-253K16 from chromosome 15, complete
             sequence
          Length = 165903

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 88    acatatgccaaatatcacagaa 109
             ||||||||||||||||||||||
Sbjct: 92596 acatatgccaaatatcacagaa 92575
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>gb|AC137905.8| Mus musculus chromosome 15, clone RP23-334B11, complete sequence
          Length = 210548

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 88    acatatgccaaatatcacagaa 109
             ||||||||||||||||||||||
Sbjct: 55053 acatatgccaaatatcacagaa 55032
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>ref|NM_005035.2| Homo sapiens polymerase (RNA) mitochondrial (DNA directed) (POLRMT),
            nuclear gene encoding mitochondrial protein, mRNA
          Length = 3832

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 376  ccaggcgcttccacagcgcctcccgcttc 404
            |||||||||||| ||||| ||||||||||
Sbjct: 2616 ccaggcgcttccgcagcggctcccgcttc 2588
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>ref|XM_477422.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2347

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 49/57 (85%), Gaps = 1/57 (1%)
 Strand = Plus / Minus

                                                                     
Query: 601  attaagttctcaatgtggtccgttgttccatagaaacagtgcccgctctgccacctg 657
            ||||| ||||||||||||| |||||||||| | ||||| ||||| ||| || |||||
Sbjct: 1725 attaaattctcaatgtggt-cgttgttccacaaaaacaatgccctctcggcaacctg 1670
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>gb|BC070057.1| Homo sapiens cDNA clone IMAGE:5296766, containing frame-shift errors
          Length = 3810

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 376  ccaggcgcttccacagcgcctcccgcttc 404
            |||||||||||| ||||| ||||||||||
Sbjct: 2640 ccaggcgcttccgcagcggctcccgcttc 2612
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>gb|BC098387.1| Homo sapiens polymerase (RNA) mitochondrial (DNA directed), mRNA
            (cDNA clone MGC:104585 IMAGE:5264127), complete cds
          Length = 3797

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 376  ccaggcgcttccacagcgcctcccgcttc 404
            |||||||||||| ||||| ||||||||||
Sbjct: 2621 ccaggcgcttccgcagcggctcccgcttc 2593
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>gb|AC105452.3| Homo sapiens BAC clone RP11-122J10 from 4, complete sequence
          Length = 154634

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 315    ttctattgattggatttgcca 335
              |||||||||||||||||||||
Sbjct: 138464 ttctattgattggatttgcca 138444
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>dbj|AK121258.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103D01, full
            insert sequence
          Length = 2385

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 49/57 (85%), Gaps = 1/57 (1%)
 Strand = Plus / Minus

                                                                     
Query: 601  attaagttctcaatgtggtccgttgttccatagaaacagtgcccgctctgccacctg 657
            ||||| ||||||||||||| |||||||||| | ||||| ||||| ||| || |||||
Sbjct: 1763 attaaattctcaatgtggt-cgttgttccacaaaaacaatgccctctcggcaacctg 1708
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>dbj|AK068665.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159O18, full
            insert sequence
          Length = 2348

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 49/57 (85%), Gaps = 1/57 (1%)
 Strand = Plus / Minus

                                                                     
Query: 601  attaagttctcaatgtggtccgttgttccatagaaacagtgcccgctctgccacctg 657
            ||||| ||||||||||||| |||||||||| | ||||| ||||| ||| || |||||
Sbjct: 1725 attaaattctcaatgtggt-cgttgttccacaaaaacaatgccctctcggcaacctg 1670
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>gb|BC030829.1| Homo sapiens cDNA clone IMAGE:4799009, containing frame-shift errors
          Length = 3783

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 376  ccaggcgcttccacagcgcctcccgcttc 404
            |||||||||||| ||||| ||||||||||
Sbjct: 2592 ccaggcgcttccgcagcggctcccgcttc 2564
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>gb|AC004449.1|AC004449 Homo sapiens chromosome 19, cosmid R33683, complete sequence
          Length = 38186

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 376   ccaggcgcttccacagcgcctcccgcttc 404
             |||||||||||| ||||| ||||||||||
Sbjct: 10178 ccaggcgcttccgcagcggctcccgcttc 10206
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>gb|U75370.1|HSU75370 Human mitochondrial RNA polymerase mRNA, nuclear gene encoding
            mitochondrial protein, complete cds
          Length = 3832

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 376  ccaggcgcttccacagcgcctcccgcttc 404
            |||||||||||| ||||| ||||||||||
Sbjct: 2616 ccaggcgcttccgcagcggctcccgcttc 2588
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>dbj|AB209920.1| Homo sapiens mRNA for DNA-directed RNA polymerase variant protein
          Length = 3270

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 376  ccaggcgcttccacagcgcctcccgcttc 404
            |||||||||||| ||||| ||||||||||
Sbjct: 2112 ccaggcgcttccgcagcggctcccgcttc 2084
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>emb|AL772131.5| Mouse DNA sequence from clone RP23-472I13 on chromosome 4, complete
             sequence
          Length = 179035

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    atatatcctcaacaaaacctg 42
             |||||||||||||||||||||
Sbjct: 40020 atatatcctcaacaaaacctg 40000
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>ref|NM_113506.1| Arabidopsis thaliana protein phosphatase type 2A regulator AT3G26020
            transcript variant AT3G26020.1 mRNA, complete cds
          Length = 2214

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 489  atcttgcgcacattcagtgtcaggctccgaacagcttggttcca 532
            ||||| ||||| || ||||||| |||  ||||||||||||||||
Sbjct: 1788 atctttcgcacgtttagtgtcaagctatgaacagcttggttcca 1745
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>ref|NM_001035693.1| Arabidopsis thaliana protein phosphatase type 2A regulator AT3G26020
            transcript variant AT3G26020.2 mRNA, complete cds
          Length = 2491

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 489  atcttgcgcacattcagtgtcaggctccgaacagcttggttcca 532
            ||||| ||||| || ||||||| |||  ||||||||||||||||
Sbjct: 1971 atctttcgcacgtttagtgtcaagctatgaacagcttggttcca 1928
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>gb|AC133004.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0046F10, complete sequence
          Length = 184041

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 77    catgccatgacacatatgccaaat 100
             ||||||||| ||||||||||||||
Sbjct: 24964 catgccatggcacatatgccaaat 24987
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>gb|AC154314.2| Mus musculus BAC clone RP23-347J22 from chromosome 13, complete
            sequence
          Length = 189556

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 39   cctgacgctgtttattggtctata 62
            |||| |||||||||||||||||||
Sbjct: 9720 cctgccgctgtttattggtctata 9743
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>gb|AC164547.4| Mus musculus BAC clone RP24-198D11 from chromosome 13, complete
             sequence
          Length = 177190

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    tatgccaaatatcacagaaa 110
             ||||||||||||||||||||
Sbjct: 95434 tatgccaaatatcacagaaa 95415
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>gb|AF100664.1| Caenorhabditis elegans cosmid M57, complete sequence
          Length = 23760

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   gaaaaggtaaaaaattcaac 232
             ||||||||||||||||||||
Sbjct: 16982 gaaaaggtaaaaaattcaac 16963
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>gb|AE013187.1| Thermoanaerobacter tengcongensis MB4, section 214 of 244 of the
            complete genome
          Length = 11851

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  gaagaaaaggtaaaaaattc 229
            ||||||||||||||||||||
Sbjct: 2651 gaagaaaaggtaaaaaattc 2632
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>gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, complete sequence
          Length = 87967

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   caagaagaaaaggtaaaaaa 226
             ||||||||||||||||||||
Sbjct: 70254 caagaagaaaaggtaaaaaa 70273
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>emb|CR450724.10| Zebrafish DNA sequence from clone DKEY-168I4 in linkage group 18,
             complete sequence
          Length = 197565

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   aattcaacactacagccaca 244
             ||||||||||||||||||||
Sbjct: 34841 aattcaacactacagccaca 34860
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>gb|AC121082.13| Mus musculus chromosome 7, clone RP23-32F14, complete sequence
          Length = 231678

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   aaccaagaagaaaaggtaaa 223
             ||||||||||||||||||||
Sbjct: 77896 aaccaagaagaaaaggtaaa 77915
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>ref|XM_720862.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05490)
           partial mRNA
          Length = 1560

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 207 caagaagaaaaggtaaaaaa 226
           ||||||||||||||||||||
Sbjct: 382 caagaagaaaaggtaaaaaa 401
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>ref|XM_735576.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000313.00.0)
           partial mRNA
          Length = 594

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 207 caagaagaaaaggtaaaaaa 226
           ||||||||||||||||||||
Sbjct: 382 caagaagaaaaggtaaaaaa 401
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>ref|XM_675214.1| Plasmodium berghei strain ANKA hypothetical protein (PB000339.00.0)
           partial mRNA
          Length = 1443

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 207 caagaagaaaaggtaaaaaa 226
           ||||||||||||||||||||
Sbjct: 382 caagaagaaaaggtaaaaaa 401
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>gb|AC159263.3| Mus musculus BAC clone RP24-66K21 from chromosome 13, complete sequence
          Length = 223738

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     tatgccaaatatcacagaaa 110
              ||||||||||||||||||||
Sbjct: 174435 tatgccaaatatcacagaaa 174416
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>gb|AC123572.15| Medicago truncatula clone mth2-2b2, complete sequence
          Length = 119925

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 45/52 (86%), Gaps = 1/52 (1%)
 Strand = Plus / Minus

                                                                
Query: 558  gcggggaagatgatgggtagtatcacctttgtagttctgcttgattaagttc 609
            ||||| |||||||| || |||||||| |||| |||| || ||||||||||||
Sbjct: 3364 gcgggaaagatgataggaagtatcac-tttgcagttttgtttgattaagttc 3314
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>emb|BX284668.4| Human DNA sequence from clone RP11-108M9 on chromosome 1 Contains four
             novel genes, a novel pseudogene, the 5' end of the CROCC
             gene for ciliary rootlet coiled-coil rootletin (KIAA0445)
             and two CpG islands, complete sequence
          Length = 93826

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   agaacaggggggaagccaaa 197
             ||||||||||||||||||||
Sbjct: 69458 agaacaggggggaagccaaa 69439
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>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome
          Length = 1995281

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    aagaagaaaaggtaaaaaat 227
              ||||||||||||||||||||
Sbjct: 600770 aagaagaaaaggtaaaaaat 600789
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>gb|AC099842.2| Homo sapiens chromosome 11, clone RP11-747E23, complete sequence
          Length = 159274

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 208  aagaagaaaaggtaaaaaattcaa 231
            |||||||||||| |||||||||||
Sbjct: 2235 aagaagaaaaggaaaaaaattcaa 2258
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 422     cttgagctcgtcgtcgtcga 441
               ||||||||||||||||||||
Sbjct: 3244921 cttgagctcgtcgtcgtcga 3244902
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>gb|AC100769.2| Homo sapiens chromosome 11, clone RP11-701P23, complete sequence
          Length = 171700

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 208    aagaagaaaaggtaaaaaattcaa 231
              |||||||||||| |||||||||||
Sbjct: 141613 aagaagaaaaggaaaaaaattcaa 141636
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>gb|AC063933.13| Homo sapiens 3 BAC RP11-566A3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168380

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 624   tgttccatagaaacagtgcc 643
             ||||||||||||||||||||
Sbjct: 55319 tgttccatagaaacagtgcc 55300
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>gb|AY059158.1| Arabidopsis thaliana AT3g26020/MPE11_17 mRNA, complete cds
          Length = 1533

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 489  atcttgcgcacattcagtgtcaggctccgaacagcttggttcca 532
            ||||| ||||| || ||||||| |||  ||||||||||||||||
Sbjct: 1391 atctttcgcacgtttagtgtcaagctatgaacagcttggttcca 1348
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>gb|AF367267.1|AF367267 Arabidopsis thaliana AT3g26020/MPE11_17 mRNA, complete cds
          Length = 2224

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 489  atcttgcgcacattcagtgtcaggctccgaacagcttggttcca 532
            ||||| ||||| || ||||||| |||  ||||||||||||||||
Sbjct: 1788 atctttcgcacgtttagtgtcaagctatgaacagcttggttcca 1745
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>tpg|BK000438.1| TPA: TPA_exp: Homo sapiens RING finger protein COP1 gene, complete cds
          Length = 421987

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 219    gtaaaaaattcaacactaca 238
              ||||||||||||||||||||
Sbjct: 230143 gtaaaaaattcaacactaca 230124
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 77       catgccatgacacatatgccaaat 100
                ||||||||| ||||||||||||||
Sbjct: 11152646 catgccatggcacatatgccaaat 11152623
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 39/44 (88%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                            
Query: 601      attaagttctcaatgtggtccgttgttccatagaaacagtgccc 644
                ||||| ||||||||||||| |||||||||| | ||||| |||||
Sbjct: 10283831 attaaattctcaatgtggt-cgttgttccacaaaaacaatgccc 10283789
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>gb|AC093911.2| Homo sapiens BAC clone RP11-765B12 from 2, complete sequence
          Length = 186199

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     atgacacatatgccaaatat 102
              ||||||||||||||||||||
Sbjct: 101598 atgacacatatgccaaatat 101617
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>dbj|AP005673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1029H08
          Length = 137050

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 39/44 (88%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                          
Query: 601    attaagttctcaatgtggtccgttgttccatagaaacagtgccc 644
              ||||| ||||||||||||| |||||||||| | ||||| |||||
Sbjct: 105750 attaaattctcaatgtggt-cgttgttccacaaaaacaatgccc 105708
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>dbj|AB023041.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MPE11
          Length = 83650

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 489   atcttgcgcacattcagtgtcaggctccgaacagcttggttcca 532
             ||||| ||||| || ||||||| |||  ||||||||||||||||
Sbjct: 57372 atctttcgcacgtttagtgtcaagctatgaacagcttggttcca 57329
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 208     aagaagaaaaggtaaaaaat 227
               ||||||||||||||||||||
Sbjct: 3382176 aagaagaaaaggtaaaaaat 3382157
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>emb|BX247951.11| Zebrafish DNA sequence from clone DKEY-246A16 in linkage group 18,
              complete sequence
          Length = 189723

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    aattcaacactacagccaca 244
              ||||||||||||||||||||
Sbjct: 136150 aattcaacactacagccaca 136131
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 77       catgccatgacacatatgccaaat 100
                ||||||||| ||||||||||||||
Sbjct: 11231835 catgccatggcacatatgccaaat 11231812
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>emb|AL590723.13| Human DNA sequence from clone RP11-492I21 on chromosome 1 Contains part
              of the gene for constitutive photomorphogenic protein
              (COP1) and a novel gene, complete sequence
          Length = 178223

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    gtaaaaaattcaacactaca 238
              ||||||||||||||||||||
Sbjct: 112427 gtaaaaaattcaacactaca 112446
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>gb|AC140293.4| Mus musculus BAC clone RP24-328A10 from 13, complete sequence
          Length = 188473

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 39     cctgacgctgtttattggtctata 62
              |||| |||||||||||||||||||
Sbjct: 152017 cctgccgctgtttattggtctata 152040
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>gb|AC171003.2| Mus musculus BAC clone RP23-207H9 from chromosome 13, complete sequence
          Length = 218821

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     tatgccaaatatcacagaaa 110
              ||||||||||||||||||||
Sbjct: 153930 tatgccaaatatcacagaaa 153949


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,747,799
Number of Sequences: 3902068
Number of extensions: 5747799
Number of successful extensions: 124504
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 124059
Number of HSP's gapped (non-prelim): 426
length of query: 697
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 674
effective length of database: 17,143,297,704
effective search space: 11554582652496
effective search space used: 11554582652496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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