ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags4i21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 67 6e-11
2APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 54 4e-07
3FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 50 4e-06
4APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 50 8e-06
5GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX) ... 32 1.3
6MUTB_PORGI (Q59677) Methylmalonyl-CoA mutase large subunit (EC 5... 30 6.2
7POLN_EEVVT (P27282) Nonstructural polyprotein (Polyprotein nsP12... 30 8.1
8POLN_EEVVP (P36328) Nonstructural polyprotein (Polyprotein nsP12... 30 8.1
9POLN_EEVV3 (P36327) Nonstructural polyprotein (Polyprotein nsP12... 30 8.1

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 66.6 bits (161), Expect = 6e-11
 Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 9/128 (7%)
 Frame = -3

Query: 648 RRYNRLAFHHNREXXXXXXXXXXKYPKTKIMYGDYFKAAMQFVVSPGKFGFSTALQACCG 469
           + YN +A H N +            P    ++ D +         P K GF   L  CCG
Sbjct: 248 KAYNEVAQHFNHKLKEIVAQLRKDLPLATFVHVDIYSVKYSLFSEPEKHGFEFPLITCCG 307

Query: 468 AGGSGAYNFNLKKKCGEA-----GASV----CSNPSAYVSWDGIHMTEAAYRMVANGWLN 316
            GG   YNF++   CG+      G  +    C+ PS  V+WDG H TEAA     +    
Sbjct: 308 YGGK--YNFSVTAPCGDTVTADDGTKIVVGSCACPSVRVNWDGAHYTEAANEYFFDQIST 365

Query: 315 GPYASPPI 292
           G ++ PP+
Sbjct: 366 GAFSDPPV 373



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
 Frame = -3

Query: 573 PKTKIMYGDYFKAAMQFVVSPGKFGFSTALQACCGAG--GSGAYNFNLKKKCGEAGASVC 400
           P +  +Y D +    Q + +P  +GF    + CC  G   +GA        C ++ + +C
Sbjct: 446 PNSTFVYMDIYTIISQMLETPAAYGFEETKKPCCKTGLLSAGAL-------CKKSTSKIC 498

Query: 399 SNPSAYVSWDGIHMTEAAYRMV 334
            N S+Y+ WDG+H T+ AY+ +
Sbjct: 499 PNTSSYLFWDGVHPTQRAYKTI 520



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 9/111 (8%)
 Frame = -3

Query: 639 NRLAFHHNREXXXXXXXXXXKYPKTKIMYGDYFKAAMQFVVSPGKFGFSTALQACCGAGG 460
           N LA   N               +  I Y D +    +  V     GF  +L +CCG GG
Sbjct: 249 NHLAQQFNHALKQAVIELRSSLSEAAITYVDVYSLKHELFVHAQGHGFKGSLVSCCGHGG 308

Query: 459 SGAYNFNLKKKCG----EAGASV-----CSNPSAYVSWDGIHMTEAAYRMV 334
              YN+N    CG      G  V     C  P   V WDG+H T+AA + +
Sbjct: 309 K--YNYNKGIGCGMKKIVKGKEVYIGKPCDEPDKAVVWDGVHFTQAANKFI 357



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>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 49.7 bits (117), Expect = 8e-06
 Identities = 25/79 (31%), Positives = 39/79 (49%)
 Frame = -3

Query: 573 PKTKIMYGDYFKAAMQFVVSPGKFGFSTALQACCGAGGSGAYNFNLKKKCGEAGASVCSN 394
           P + I+YGD +    + + SP  +GF    + CC  G +    F     C E      SN
Sbjct: 363 PNSTIVYGDIYSIFSKMLESPEDYGFEEIKKPCCKIGLTKGGVF-----CKERTLKNMSN 417

Query: 393 PSAYVSWDGIHMTEAAYRM 337
            S+Y+ WDG+H ++ AY +
Sbjct: 418 ASSYLFWDGLHPSQRAYEI 436



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>GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX)|
           (Endo-1,4-beta-glucanase) (Cellulase) (Fragment)
          Length = 224

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 381 VSWDGIHMTEAAYRMVANGW 322
           +SWDG+H++E  Y  +AN W
Sbjct: 114 ISWDGLHLSEIGYTKIANIW 133



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>MUTB_PORGI (Q59677) Methylmalonyl-CoA mutase large subunit (EC 5.4.99.2)|
           (MCM-alpha)
          Length = 715

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = -3

Query: 519 VSPGKFGFSTALQACCGAGGSGAYNFNLKKKCGEAGASVCSNPSAYVSWDGIHMTEAAYR 340
           ++ G+ G S A       G    ++  +    G+AG S+CS     V +DGI +++ +  
Sbjct: 101 LASGQKGLSVAFDLATHRGYDADHS-RVVGDVGKAGVSICSLEDMKVLFDGIPLSKMSVS 159

Query: 339 MVANG 325
           M  NG
Sbjct: 160 MTMNG 164



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>POLN_EEVVT (P27282) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2492

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 461  PPAPQHACNAVLKPNFPGLTTNCI 532
            P     ACNA+LK NFP + + CI
Sbjct: 2002 PKVAVEACNAMLKENFPTVASYCI 2025



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>POLN_EEVVP (P36328) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2492

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 461  PPAPQHACNAVLKPNFPGLTTNCI 532
            P     ACNA+LK NFP + + CI
Sbjct: 2002 PKVAVEACNAMLKENFPTVASYCI 2025



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>POLN_EEVV3 (P36327) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2485

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 461  PPAPQHACNAVLKPNFPGLTTNCI 532
            P     ACNA+LK NFP + + CI
Sbjct: 1995 PKVAVEACNAMLKENFPTVASYCI 2018


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,142,232
Number of Sequences: 219361
Number of extensions: 1269948
Number of successful extensions: 3202
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3197
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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